Rroxscaffold_3G00257470

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0000039
Physical Location & Seq
Forward (+)
51825261 .. 51838767
13507 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00257470.1

Sequence Viewer

Length: 705 bp
ATGGCACATAAAGATGAGAAGGAAGTTGCGGAAAGGGCACATAAAGAATTAATGAGGGTAAGACTTCTTTATGGACTAAAGCGAGCAATAGTGTCGGCGGCTGGAATAATATACCAGAATCCCAAACCAACGGCTCTCGGCCACGTGCGCCCACTATCATCATTAATTGTCGCTACACGACAAAAAACCAAATCGAAGGCACAACGGACGTGGCGCTCCCCCATTCGTCCGTGCTCTTCACGCCTCTCTCTTTCGGGTCTCCTTCGCGCGGCCCCCGTGACGTCGGCCACGATCCGCGCGGGGCGAGCTAGCGGCCGGTCAAGCACGGGAAATACAAAAGGCATGGGCTTGGAATTTTTCTTGCCCTTGGTCAAAGAAAGCCAAACTTTGCCCGCCGGCGCGCCAAAGAGTTTGCCGACGAGCTCGGCTTCTTTCACTTCTCGCAACTCTTCATCTTCAGCTTTGGGTGGCTCCATGACAAGTATGAATGAAGAGACAATTAATACAATGGAAGAAAGAGAAGCTGTGGCAGAAAGTGGACACATGGAACGACCCCTCCATCTTAACGTCGTTGGCTGCGTATCTTACAACCTGCGTATTCCAGATTTCTCCGTCTCCTACCTAGCTTGCTCTTACTTGTTGAAACAAAGAAGATGGATGAATAATGCCCAGAATATCCTTCTCTTTGGACGTTTCTTCAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

234

Amino Acids

25.68

Weight (kDa)

10.56

Isoelectric Point (pI)

46.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 284
Acc36I ACCTGC 1 cut(s) 600
AccII CGCG 5 cut(s) 267, 269, 297, 299, 401
AciI CCGC 7 cut(s) 29, 98, 269, 295, 299, 312, 393
AclWI GGATC 1 cut(s) 286
AcoI YGGCCR 3 cut(s) 139, 285, 313
AcsI RAATTY 1 cut(s) 353
AcuI CTGAAG 1 cut(s) 441
AcvI CACGTG 1 cut(s) 145
AcyI GRCGYC 1 cut(s) 281
AfiI CCNNNNNNNGG 1 cut(s) 268
AgsI TTSAA 2 cut(s) 643, 700
AjiI CACGTC 1 cut(s) 210
AloI GAACNNNNNNTCC 2 cut(s) 540, 572
AluBI AGCT 5 cut(s) 308, 423, 461, 524, 626
AluI AGCT 5 cut(s) 308, 423, 461, 524, 626
Alw21I GWGCWC 2 cut(s) 236, 425
Alw26I GTCTC 3 cut(s) 263, 488, 619
AlwI GGATC 1 cut(s) 286
AoxI GGCC 4 cut(s) 139, 270, 285, 313
ApeKI GCWGC 1 cut(s) 576
ApoI RAATTY 1 cut(s) 353
AscI GGCGCGCC 1 cut(s) 399
AseI ATTAAT 3 cut(s) 50, 164, 501
AspLEI GCGC 6 cut(s) 150, 216, 269, 299, 401, 403
AspS9I GGNCC 1 cut(s) 271
AsuNHI GCTAGC 1 cut(s) 308
BaeGI GKGCMC 1 cut(s) 40
BanII GRGCYC 1 cut(s) 425
BbrPI CACGTG 1 cut(s) 145
Bbv12I GWGCWC 2 cut(s) 236, 425
BbvI GCAGC 1 cut(s) 563
BccI CCATC 2 cut(s) 567, 648
BceAI ACGGC 1 cut(s) 147
BcgI CGANNNNNNTGC 2 cut(s) 75, 109
BcoDI GTCTC 3 cut(s) 263, 488, 619
BfaI CTAG 3 cut(s) 309, 623, 703
BfoI RGCGCY 1 cut(s) 217
BfuAI ACCTGC 1 cut(s) 600
BisI GCNGC 4 cut(s) 99, 270, 313, 577
BlsI GCNGC 4 cut(s) 100, 271, 314, 578
BmgBI CACGTC 1 cut(s) 210
BmgT120I GGNCC 1 cut(s) 271
BmiI GGNNCC 2 cut(s) 273, 472
BmtI GCTAGC 1 cut(s) 312
BsaAI YACGTR 1 cut(s) 145
BsaHI GRCGYC 1 cut(s) 281
BsaI GGTCTC 1 cut(s) 263
BsaJI CCNNGG 1 cut(s) 366
BsaXI ACNNNNNCTCC 2 cut(s) 540, 570
Bsc4I CCNNNNNNNGG 1 cut(s) 268
Bse118I RCCGGY 2 cut(s) 315, 395
BseDI CCNNGG 1 cut(s) 366
BseGI GGATG 1 cut(s) 663
BseLI CCNNNNNNNGG 1 cut(s) 268
BsePI GCGCGC 1 cut(s) 399
BseSI GKGCMC 1 cut(s) 40
BseX3I CGGCCG 1 cut(s) 313
BseXI GCAGC 1 cut(s) 563
Bsh1236I CGCG 5 cut(s) 267, 269, 297, 299, 401
Bsh1285I CGRYCG 1 cut(s) 316
BshFI GGCC 4 cut(s) 141, 272, 287, 315
BsiEI CGRYCG 1 cut(s) 316
BsiHKAI GWGCWC 2 cut(s) 236, 425
BsiSI CCGG 2 cut(s) 316, 396
BslI CCNNNNNNNGG 1 cut(s) 268
BsmAI GTCTC 3 cut(s) 263, 488, 619
BsmBI CGTCTC 1 cut(s) 619
BsnI GGCC 4 cut(s) 141, 272, 287, 315
Bso31I GGTCTC 1 cut(s) 263
Bsp1286I GDGCHC 3 cut(s) 40, 236, 425
Bsp143I GATC 1 cut(s) 291
BspACI CCGC 7 cut(s) 29, 98, 269, 295, 299, 312, 393
BspANI GGCC 4 cut(s) 141, 272, 287, 315
BspFNI CGCG 5 cut(s) 267, 269, 297, 299, 401
BspLI GGNNCC 2 cut(s) 273, 472
BspMI ACCTGC 1 cut(s) 600
BspOI GCTAGC 1 cut(s) 312
BspPI GGATC 1 cut(s) 286
BspQI GCTCTTC 1 cut(s) 241
BspTNI GGTCTC 1 cut(s) 263
BsrFI RCCGGY 2 cut(s) 315, 395
BssAI RCCGGY 2 cut(s) 315, 395
BssECI CCNNGG 1 cut(s) 366
BssHII GCGCGC 1 cut(s) 399
BssMI GATC 1 cut(s) 291
BssNI GRCGYC 1 cut(s) 281
BssT1I CCWWGG 1 cut(s) 366
Bst6I CTCTTC 3 cut(s) 241, 454, 486
BstACI GRCGYC 1 cut(s) 281
BstBAI YACGTR 1 cut(s) 145
BstC8I GCNNGC 7 cut(s) 84, 306, 310, 393, 397, 401, 628
BstF5I GGATG 1 cut(s) 663
BstFNI CGCG 5 cut(s) 267, 269, 297, 299, 401
BstH2I RGCGCY 1 cut(s) 217
BstHHI GCGC 6 cut(s) 150, 216, 269, 299, 401, 403
BstKTI GATC 1 cut(s) 294
BstMAI GTCTC 3 cut(s) 263, 488, 619
BstMBI GATC 1 cut(s) 291
BstMCI CGRYCG 1 cut(s) 316
BstMWI GCNNNNNNNGC 5 cut(s) 35, 147, 240, 305, 321
BstSLI GKGCMC 1 cut(s) 40
BstUI CGCG 5 cut(s) 267, 269, 297, 299, 401
BstV1I GCAGC 1 cut(s) 563
BstZI CGGCCG 1 cut(s) 313
BsuRI GGCC 4 cut(s) 141, 272, 287, 315
BtrI CACGTC 1 cut(s) 210
BtsCI GGATG 1 cut(s) 663
BveI ACCTGC 1 cut(s) 600
Cac8I GCNNGC 7 cut(s) 84, 306, 310, 393, 397, 401, 628
CfoI GCGC 6 cut(s) 150, 216, 269, 299, 401, 403
Cfr10I RCCGGY 2 cut(s) 315, 395
Cfr13I GGNCC 1 cut(s) 271
CspCI CAANNNNNGTGG 2 cut(s) 191, 226
CviAII CATG 3 cut(s) 343, 475, 544
DpnI GATC 1 cut(s) 293
DpnII GATC 1 cut(s) 291
EaeI YGGCCR 3 cut(s) 139, 285, 313
EagI CGGCCG 1 cut(s) 313
Eam1104I CTCTTC 3 cut(s) 241, 454, 486
EarI CTCTTC 3 cut(s) 241, 454, 486
Ecl136II GAGCTC 1 cut(s) 423
EclXI CGGCCG 1 cut(s) 313
Eco130I CCWWGG 1 cut(s) 366
Eco24I GRGCYC 1 cut(s) 425
Eco31I GGTCTC 1 cut(s) 263
Eco52I CGGCCG 1 cut(s) 313
Eco53kI GAGCTC 1 cut(s) 423
Eco57I CTGAAG 1 cut(s) 441
Eco72I CACGTG 1 cut(s) 145
EcoICRI GAGCTC 1 cut(s) 423
EcoT14I CCWWGG 1 cut(s) 366
EcoT38I GRGCYC 1 cut(s) 425
ErhI CCWWGG 1 cut(s) 366
Esp3I CGTCTC 1 cut(s) 619
FaeI CATG 3 cut(s) 346, 478, 547
FaiI YATR 8 cut(s) 9, 42, 72, 112, 344, 476, 485, 545
FalI AAGNNNNNCTT 2 cut(s) 370, 402
FatI CATG 3 cut(s) 342, 474, 543
FauI CCCGC 2 cut(s) 292, 400
Fnu4HI GCNGC 4 cut(s) 99, 270, 313, 577
FokI GGATG 1 cut(s) 670
FriOI GRGCYC 1 cut(s) 425
Fsp4HI GCNGC 4 cut(s) 99, 270, 313, 577
FspBI CTAG 3 cut(s) 309, 623, 703
GlaI GCGC 6 cut(s) 149, 215, 268, 298, 400, 402
GluI GCNGC 4 cut(s) 99, 270, 313, 577
HaeII RGCGCY 1 cut(s) 217
HaeIII GGCC 4 cut(s) 141, 272, 287, 315
HapII CCGG 2 cut(s) 316, 396
HhaI GCGC 6 cut(s) 150, 216, 269, 299, 401, 403
Hin1I GRCGYC 1 cut(s) 281
Hin1II CATG 3 cut(s) 346, 478, 547
Hin6I GCGC 6 cut(s) 148, 214, 267, 297, 399, 401
HinP1I GCGC 6 cut(s) 148, 214, 267, 297, 399, 401
HinfI GANTC 1 cut(s) 118
HpaII CCGG 2 cut(s) 316, 396
Hpy166II GTNNAC 1 cut(s) 539
Hpy188III TCNNGA 1 cut(s) 602
Hpy8I GTNNAC 1 cut(s) 539
Hpy99I CGWCG 3 cut(s) 286, 421, 572
HpyAV CCTTC 4 cut(s) 13, 190, 272, 689
HpyCH4IV ACGT 5 cut(s) 144, 209, 281, 567, 691
HpyF10VI GCNNNNNNNGC 5 cut(s) 35, 147, 240, 305, 321
HpySE526I ACGT 5 cut(s) 144, 209, 281, 567, 691
Hsp92I GRCGYC 1 cut(s) 281
Hsp92II CATG 3 cut(s) 346, 478, 547
HspAI GCGC 6 cut(s) 148, 214, 267, 297, 399, 401
KroI GCCGGC 1 cut(s) 395
KroNI GCCGGC 1 cut(s) 397
Kzo9I GATC 1 cut(s) 291
LguI GCTCTTC 1 cut(s) 241
LmnI GCTCC 2 cut(s) 221, 476
LpnPI CCDG 7 cut(s) 87, 128, 329, 409, 605, 615, 683
Lsp1109I GCAGC 1 cut(s) 563
MaeI CTAG 3 cut(s) 309, 623, 703
MaeII ACGT 5 cut(s) 144, 209, 281, 567, 691
MaeIII GTNAC 1 cut(s) 277
MalI GATC 1 cut(s) 293
MboI GATC 1 cut(s) 291
MboII GAAGA 7 cut(s) 228, 441, 447, 503, 524, 663, 688
MhlI GDGCHC 3 cut(s) 40, 236, 425
MluCI AATT 4 cut(s) 47, 165, 353, 498
MnlI CCTC 3 cut(s) 48, 254, 566
MreI CGCCGGCG 1 cut(s) 395
MroNI GCCGGC 1 cut(s) 395
MseI TTAA 4 cut(s) 50, 164, 501, 564
MslI CAYNNNNRTG 1 cut(s) 12
MspI CCGG 2 cut(s) 316, 396
MvnI CGCG 5 cut(s) 267, 269, 297, 299, 401
MwoI GCNNNNNNNGC 5 cut(s) 35, 147, 240, 305, 321
NaeI GCCGGC 1 cut(s) 397
NdeII GATC 1 cut(s) 291
NgoMIV GCCGGC 1 cut(s) 395
NheI GCTAGC 1 cut(s) 308
NlaIII CATG 3 cut(s) 346, 478, 547
NlaIV GGNNCC 2 cut(s) 273, 472
NmeAIII GCCGAG 2 cut(s) 117, 404
NmuCI GTSAC 1 cut(s) 277
PalAI GGCGCGCC 1 cut(s) 399
PauI GCGCGC 1 cut(s) 399
PciSI GCTCTTC 1 cut(s) 241
PcsI WCGNNNNNNNCGW 2 cut(s) 287, 576
PdiI GCCGGC 1 cut(s) 397
PfeI GAWTC 1 cut(s) 118
PkrI GCNGC 4 cut(s) 100, 271, 314, 578
PmaCI CACGTG 1 cut(s) 145
PmlI CACGTG 1 cut(s) 145
Ppu21I YACGTR 1 cut(s) 145
PshBI ATTAAT 3 cut(s) 50, 164, 501
Psp124BI GAGCTC 1 cut(s) 425
PspCI CACGTG 1 cut(s) 145
PspN4I GGNNCC 2 cut(s) 273, 472
PspPI GGNCC 1 cut(s) 271
PteI GCGCGC 1 cut(s) 399
RseI CAYNNNNRTG 1 cut(s) 12
SacI GAGCTC 1 cut(s) 425
SapI GCTCTTC 1 cut(s) 241
SaqAI TTAA 4 cut(s) 50, 164, 501, 564
SatI GCNGC 4 cut(s) 99, 270, 313, 577
Sau3AI GATC 1 cut(s) 291
Sau96I GGNCC 1 cut(s) 271
SduI GDGCHC 3 cut(s) 40, 236, 425
SgrAI CRCCGGYG 1 cut(s) 395
SgsI GGCGCGCC 1 cut(s) 399
SmiMI CAYNNNNRTG 1 cut(s) 12
Sse9I AATT 4 cut(s) 47, 165, 353, 498
SsiI CCGC 7 cut(s) 29, 98, 269, 295, 299, 312, 393
SspMI CTAG 3 cut(s) 309, 623, 703
SstI GAGCTC 1 cut(s) 425
StyI CCWWGG 1 cut(s) 366
TaiI ACGT 5 cut(s) 147, 212, 284, 570, 694
TaqI TCGA 1 cut(s) 194
TasI AATT 4 cut(s) 47, 165, 353, 498
TauI GCSGC 3 cut(s) 101, 272, 315
TfiI GAWTC 1 cut(s) 118
Tru1I TTAA 4 cut(s) 50, 164, 501, 564
Tru9I TTAA 4 cut(s) 50, 164, 501, 564
TseFI GTSAC 1 cut(s) 277
TseI GCWGC 1 cut(s) 576
Tsp45I GTSAC 1 cut(s) 277
TspDTI ATGAA 4 cut(s) 441, 500, 504, 674
TspGWI ACGGA 3 cut(s) 219, 220, 601
VspI ATTAAT 3 cut(s) 50, 164, 501
XapI RAATTY 1 cut(s) 353
XspI CTAG 3 cut(s) 309, 623, 703
ZraI GACGTC 1 cut(s) 282
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.