MD08G1084900.v1.1

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
OG0000039
Physical Location & Seq
Forward (+)
7051165 .. 7055180
4016 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1084900.v1.1.491

Sequence Viewer

Length: 2403 bp
ATGGAAGCGGTCCTTGCGTCAGTTGTAGGATCTGTTGTAAAAGTACCATTTGAATGGCTGTTTGAAGCCGCCAAAAAGGCGCACGAGATGGCTAAGACGTTTCCAATTCACCACAGTAATCTCATTTCAACGCTAGACTCTTTGGTACCGCTGATCGCGCAGATAAACCACACCGGAACCAATTCGGTTTCTGAAAATTTTACAAGAACAATGGAGGATGGCAAGAAGCTGGTCGAAAGGTGCGAGGGGAAGCTGAACTACTTTGAAAAGGCTAAATATGCTCAAGAGATTGTTGAATTGGACAAATCTCTTCAAAGACTCTTGCTTCTGCTGGCTGTGCAGTTAGGAGTTAATTCCGCGGTGGTGCTCAACCGAATTGATGCAAATCTTGTGCCTCAAAATCAAATCCGATACCGTATTACAACTAGGTATGCAGTTCCTTACCTTCCACACGATACACTTCGGCTGGATACACAATTGGCACAATTGGCTGAGATCAGGATGAAACTCCTTACGGACAACGCGCCGCCAATGCTTGTGCTCACTGCTCTGCCAGGATGTGGGAAAACCTATTTGGCAAAAATGCTTTGTCATGATCAACGAGTCAAAGCTAAATTCAACAATATCTTCTTTACCACGGTTTCCGAAAACCCCAACATTGATGTCCAAGAATTCTGCCAACATGCCGGATTCAGGTCACCTGCATTAGAAAATGAAGAAATTGCAGCTGGGCAAAATCGTTTCCTATTAATCTTGGACGATGTTCCGTCTACATCAGAATCCCTTCTTCACGAGTTTAATCAAATCAACATTTCAGATTCCAAGATTTTGGTGACATCAAGATGCCATTTTCCCAAAGTCGGGTCCCCACATGAAGTACAACCATTGAGCAATGACGACGCAGAGACTCTTTTTTGTCGTTCGGCATTCCGGAATACGAGCCTCAGCAAAGGTGATTTTCAGGAAGAGTTGAACAAGATAGTAAGCCACTGTAAGAAATTTCCACTTGCCATTACAACGATAGGAGGGTCACTTTGTAATCAGCCTATAGAGAAATGGATACTCAAACGCACAGAATTATCTGAAGGTTCGATTCTCGAGTCAGAGGAAAGTTTGCGTGTGGTCCTCCAAAGTTGCTTAGATGACTTGAATAAAAGAATGGCTACTGTCAAGGATTGCTTCAAAATGGCTACTGTCAAGGATTGTTTCAAAGACCTTGGTTTATTTCCCAAAAACCAAAGAATCCCCGTTGCTGCCCTCCTTGATATGTGGGCAGAGTTCTATGAGGGATCAAATGATAACATGTCAATGGTGAACCTCTACCAGCTCACCATCTGCAATTTGGCCAGTATTGTAATAACAAGGAATAAGGGTATAGATGGCTACTATGGTGAACACTTTGTTCTCCAACATGATATGCTTAAATTGCTATCAATCCTTGAGAGTAGTGAAGACCCGATGGGCAATAGACTGATTATCGACATACGTGAAAAGGAGCTTCCACCAACATGGTGGACGGAGAACCAGCAGAAAATGAATAAGGCTCGCTTGGTATCTGTCTCAACTGGCGAATCCTCCTCAACAAAGTGGCACAACATGGATCTACCAAAAGGCGAGGTTCTAGTTTTGAATTTTCAAGCAAAGAACTATGCCTTACCCAAGTTCATGAAGAAAATGTCCAAGTTGAAGGTTCTAATAGTCACAAATGATGGCTTCTCACCTGCTGAGCTAAGCAACATTGAACTGCTGTGTTCTTTATCTAATCTAAAGAGACTAAGATTCGAGCGTATTTTGATTCCTTTGATAAGCAAGATGAGCATTCAATCGAAGAGTCTAAAGAAGATATCTTTATTCATGTGTAACGTCAGAGAAGCATTTGGAAACTCTTCCATCCAAATTTTTGAGATATTCCCATACCTAGAGGAGTTGCACATCGACTATTGTAGCGATTTGGAGAAATTGCCTGCCAAGCTATGTGATCTTAAACGCCTAAAAGTTCTCAGCATCACCAACTGTCATAAGCTATCTGTCTTGCCTGAAGACATCGGAAAGCTGGAGAATTTGGAAGTGTTGAGGCTAAGGTCCTGCACAGATTTGGAAGAGCTTCCAGGCTCGATTGAGAAACTCAGTAAGTTGTACTTTCTTGACATATATAATTGTTCCAGCATTAAGGAGTTGCCCGAATGCATTGCAAAGATGAATGGTTTAAGAAAAATCAACATGGCACAATGTTCAAGATTGAATCTGCCTGTGTCAGTGTATGATCTTCATCAGCAACTAGAGAAAGTGACATGTGACGAAGACAAAAGAGATTTCTGGGAATCTGTCTTCTCAAATCCCGACAAAATAACGGTGGCTAATGAAGAATTCAACCTGAATTGGCTCCACAAACCTCAGAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
NB-ARC RPW8

Protein Analysis

801

Amino Acids

90.99

Weight (kDa)

6.56

Isoelectric Point (pI)

46.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RPW8 PF05659 8 - 108 1.4e-13 Arabidopsis broad-spectrum mildew resistance protein RPW8
NB-ARC PF00931 163 - 313 1e-08 NB-ARC domain
LRR_14 PF23598 632 - 747 1.7e-14 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 709, 1729
Acc36I ACCTGC 2 cut(s) 709, 1729
Acc65I GGTACC 1 cut(s) 145
AccB1I GGYRCC 1 cut(s) 145
AccB7I CCANNNNNTGG 1 cut(s) 560
AccI GTMKAC 1 cut(s) 770
AccII CGCG 3 cut(s) 158, 359, 524
AccIII TCCGGA 1 cut(s) 930
AciI CCGC 6 cut(s) 8, 69, 149, 357, 359, 527
AclWI GGATC 3 cut(s) 37, 1297, 1608
AcoI YGGCCR 1 cut(s) 1344
AcsI RAATTY 8 cut(s) 196, 614, 671, 998, 1630, 1896, 2059, 2366
AcuI CTGAAG 2 cut(s) 1104, 2058
AfaI GTAC 4 cut(s) 45, 147, 879, 2138
AfiI CCNNNNNNNGG 4 cut(s) 560, 693, 860, 861
AflIII ACRYGT 2 cut(s) 1302, 2291
AjnI CCWGG 2 cut(s) 553, 2107
AjuI GAANNNNNNNTTGG 2 cut(s) 557, 589
Alw21I GWGCWC 2 cut(s) 369, 543
Alw26I GTCTC 3 cut(s) 899, 1564, 1765
AlwI GGATC 3 cut(s) 37, 1297, 1608
Ama87I CYCGRG 1 cut(s) 1097
Aor13HI TCCGGA 1 cut(s) 930
AoxI GGCC 1 cut(s) 1344
ApeKI GCWGC 2 cut(s) 725, 1253
ApoI RAATTY 8 cut(s) 196, 614, 671, 998, 1630, 1896, 2059, 2366
AseI ATTAAT 1 cut(s) 749
Asp700I GAANNNNTTC 4 cut(s) 181, 783, 1885, 2103
Asp718I GGTACC 1 cut(s) 145
AspLEI GCGC 3 cut(s) 82, 160, 526
AspS9I GGNCC 4 cut(s) 10, 864, 1123, 2082
AsuHPI GGTGA 9 cut(s) 101, 690, 844, 965, 1321, 1324, 1403, 1710, 1999
AvaI CYCGRG 1 cut(s) 1097
AvaII GGWCC 4 cut(s) 10, 864, 1123, 2082
BalI TGGCCA 1 cut(s) 1346
BanI GGYRCC 1 cut(s) 145
BarI GAAGNNNNNNTAC 2 cut(s) 242, 274
BauI CACGAG 2 cut(s) 83, 791
BbsI GAAGAC 4 cut(s) 1458, 2046, 2307, 2320
Bbv12I GWGCWC 2 cut(s) 369, 543
BbvCI CCTCAGC 1 cut(s) 944
BbvI GCAGC 2 cut(s) 737, 1240
BccI CCATC 7 cut(s) 82, 212, 1340, 1373, 1453, 1703, 1898
BcgI CGANNNNNNTGC 2 cut(s) 2171, 2205
BciT130I CCWGG 2 cut(s) 555, 2109
BciVI GTATCC 2 cut(s) 463, 1053
BclI TGATCA 1 cut(s) 595
BcoDI GTCTC 3 cut(s) 899, 1564, 1765
BfaI CTAG 5 cut(s) 134, 426, 1622, 1919, 2279
BfmI CTRYAG 1 cut(s) 1047
BfuAI ACCTGC 2 cut(s) 709, 1729
BfuI GTATCC 2 cut(s) 463, 1053
BglI GCCNNNNNGGC 1 cut(s) 77
BisI GCNGC 4 cut(s) 69, 527, 726, 1254
BlpI GCTNAGC 2 cut(s) 1725, 1730
BlsI GCNGC 4 cut(s) 70, 528, 727, 1255
Bme1390I CCNGG 2 cut(s) 555, 2109
Bme18I GGWCC 4 cut(s) 10, 864, 1123, 2082
BmeT110I CYCGRG 1 cut(s) 1097
BmgT120I GGNCC 4 cut(s) 10, 864, 1123, 2082
BmiI GGNNCC 5 cut(s) 147, 178, 865, 866, 2384
BmrFI CCNGG 2 cut(s) 555, 2109
BmsI GCATC 3 cut(s) 370, 833, 2013
BpiI GAAGAC 4 cut(s) 1458, 2046, 2307, 2320
BpmI CTGGAG 1 cut(s) 2075
Bpu10I CCTNAGC 2 cut(s) 944, 2078
Bpu1102I GCTNAGC 2 cut(s) 1725, 1730
BpuEI CTTGAG 2 cut(s) 267, 1460
BsaAI YACGTR 1 cut(s) 1487
BsaBI GATNNNNATC 2 cut(s) 384, 2268
BsaJI CCNNGG 3 cut(s) 357, 636, 1216
BsaWI WCCGGW 2 cut(s) 173, 930
Bsc4I CCNNNNNNNGG 4 cut(s) 560, 693, 860, 861
Bse1I ACTGG 2 cut(s) 1347, 1570
Bse3DI GCAATG 2 cut(s) 898, 2187
Bse8I GATNNNNATC 2 cut(s) 384, 2268
BseAI TCCGGA 1 cut(s) 930
BseBI CCWGG 2 cut(s) 555, 2109
BseDI CCNNGG 3 cut(s) 357, 636, 1216
BseGI GGATG 4 cut(s) 223, 507, 563, 1890
BseJI GATNNNNATC 2 cut(s) 384, 2268
BseLI CCNNNNNNNGG 4 cut(s) 560, 693, 860, 861
BseMI GCAATG 2 cut(s) 898, 2187
BseMII CTCAG 5 cut(s) 483, 958, 1716, 2014, 2140
BseNI ACTGG 2 cut(s) 1347, 1570
BseRI GAGGAG 2 cut(s) 1567, 1937
BseXI GCAGC 2 cut(s) 737, 1240
BseYI CCCAGC 1 cut(s) 728
BsgI GTGCAG 2 cut(s) 359, 2071
Bsh1236I CGCG 3 cut(s) 158, 359, 524
BshFI GGCC 1 cut(s) 1346
BshNI GGYRCC 1 cut(s) 145
BsiHKAI GWGCWC 2 cut(s) 369, 543
BsiHKCI CYCGRG 1 cut(s) 1097
BsiSI CCGG 3 cut(s) 174, 687, 931
BslFI GGGAC 1 cut(s) 850
BslI CCNNNNNNNGG 4 cut(s) 560, 693, 860, 861
BsmAI GTCTC 3 cut(s) 899, 1564, 1765
BsmFI GGGAC 1 cut(s) 850
BsmI GAATGC 3 cut(s) 926, 1818, 2189
BsnI GGCC 1 cut(s) 1346
BsoBI CYCGRG 1 cut(s) 1097
Bsp1286I GDGCHC 2 cut(s) 369, 543
Bsp13I TCCGGA 1 cut(s) 930
Bsp143I GATC 8 cut(s) 29, 153, 495, 595, 1289, 1600, 1978, 2263
Bsp1720I GCTNAGC 2 cut(s) 1725, 1730
BspACI CCGC 6 cut(s) 8, 69, 149, 357, 359, 527
BspANI GGCC 1 cut(s) 1346
BspCNI CTCAG 5 cut(s) 484, 957, 1717, 2013, 2139
BspEI TCCGGA 1 cut(s) 930
BspFNI CGCG 3 cut(s) 158, 359, 524
BspHI TCATGA 2 cut(s) 592, 1665
BspLI GGNNCC 5 cut(s) 147, 178, 865, 866, 2384
BspMI ACCTGC 2 cut(s) 709, 1729
BspPI GGATC 3 cut(s) 37, 1297, 1608
BspQI GCTCTTC 1 cut(s) 2094
BspT107I GGYRCC 1 cut(s) 145
BsrDI GCAATG 2 cut(s) 898, 2187
BsrI ACTGG 2 cut(s) 1347, 1570
BssECI CCNNGG 3 cut(s) 357, 636, 1216
BssMI GATC 8 cut(s) 29, 153, 495, 595, 1289, 1600, 1978, 2263
BssSI CACGAG 2 cut(s) 83, 791
BssT1I CCWWGG 1 cut(s) 1216
Bst2BI CACGAG 2 cut(s) 83, 791
Bst2UI CCWGG 2 cut(s) 555, 2109
Bst4CI ACNGT 8 cut(s) 116, 416, 640, 992, 1168, 1195, 2015, 2353
Bst6I CTCTTC 5 cut(s) 315, 960, 1823, 1891, 2094
BstBAI YACGTR 1 cut(s) 1487
BstC8I GCNNGC 3 cut(s) 333, 1546, 1965
BstDSI CCRYGG 2 cut(s) 357, 636
BstEII GGTNACC 1 cut(s) 696
BstF5I GGATG 4 cut(s) 223, 507, 563, 1890
BstFNI CGCG 3 cut(s) 158, 359, 524
BstHHI GCGC 3 cut(s) 82, 160, 526
BstKTI GATC 8 cut(s) 32, 156, 498, 598, 1292, 1603, 1981, 2266
BstMAI GTCTC 3 cut(s) 899, 1564, 1765
BstMBI GATC 8 cut(s) 29, 153, 495, 595, 1289, 1600, 1978, 2263
BstNI CCWGG 2 cut(s) 555, 2109
BstNSI RCATGY 3 cut(s) 686, 1306, 2295
BstPI GGTNACC 1 cut(s) 696
BstSCI CCNGG 2 cut(s) 553, 2107
BstSFI CTRYAG 1 cut(s) 1047
BstUI CGCG 3 cut(s) 158, 359, 524
BstV1I GCAGC 2 cut(s) 737, 1240
BstV2I GAAGAC 4 cut(s) 1458, 2046, 2307, 2320
BstX2I RGATCY 2 cut(s) 29, 1600
BstXI CCANNNNNNTGG 4 cut(s) 54, 829, 1509, 1512
BstYI RGATCY 2 cut(s) 29, 1600
BsuI GTATCC 2 cut(s) 463, 1053
BsuRI GGCC 1 cut(s) 1346
BtgI CCRYGG 2 cut(s) 357, 636
BtsCI GGATG 4 cut(s) 223, 507, 563, 1890
BtsI GCAGTG 1 cut(s) 543
BtsIMutI CAGTG 3 cut(s) 543, 988, 2262
BveI ACCTGC 2 cut(s) 709, 1729
Cac8I GCNNGC 3 cut(s) 333, 1546, 1965
CciI TCATGA 2 cut(s) 592, 1665
CfoI GCGC 3 cut(s) 82, 160, 526
Cfr13I GGNCC 4 cut(s) 10, 864, 1123, 2082
Cfr42I CCGCGG 1 cut(s) 360
CseI GACGC 2 cut(s) 6, 908
Csp6I GTAC 4 cut(s) 44, 146, 878, 2137
CviQI GTAC 4 cut(s) 44, 146, 878, 2137
DpnI GATC 8 cut(s) 31, 155, 497, 597, 1291, 1602, 1980, 2265
DpnII GATC 8 cut(s) 29, 153, 495, 595, 1289, 1600, 1978, 2263
EaeI YGGCCR 1 cut(s) 1344
Eam1104I CTCTTC 5 cut(s) 315, 960, 1823, 1891, 2094
EarI CTCTTC 5 cut(s) 315, 960, 1823, 1891, 2094
Eco130I CCWWGG 1 cut(s) 1216
Eco32I GATATC 1 cut(s) 1845
Eco47I GGWCC 4 cut(s) 10, 864, 1123, 2082
Eco57I CTGAAG 2 cut(s) 1104, 2058
Eco88I CYCGRG 1 cut(s) 1097
Eco91I GGTNACC 1 cut(s) 696
EcoO109I RGGNCCY 2 cut(s) 864, 2082
EcoO65I GGTNACC 1 cut(s) 696
EcoRI GAATTC 2 cut(s) 671, 2366
EcoRII CCWGG 2 cut(s) 553, 2107
EcoRV GATATC 1 cut(s) 1845
EcoT14I CCWWGG 1 cut(s) 1216
EcoT22I ATGCAT 1 cut(s) 2189
ErhI CCWWGG 1 cut(s) 1216
FalI AAGNNNNNCTT 7 cut(s) 29, 1163, 1195, 1532, 1564, 2123, 2155
FaqI GGGAC 1 cut(s) 850
FbaI TGATCA 1 cut(s) 595
FblI GTMKAC 1 cut(s) 770
Fnu4HI GCNGC 4 cut(s) 69, 527, 726, 1254
FokI GGATG 4 cut(s) 230, 514, 570, 1877
Fsp4HI GCNGC 4 cut(s) 69, 527, 726, 1254
FspBI CTAG 5 cut(s) 134, 426, 1622, 1919, 2279
GlaI GCGC 3 cut(s) 81, 159, 525
GluI GCNGC 4 cut(s) 69, 527, 726, 1254
GsaI CCCAGC 1 cut(s) 732
GsuI CTGGAG 1 cut(s) 2075
HaeIII GGCC 1 cut(s) 1346
HapII CCGG 3 cut(s) 174, 687, 931
HgaI GACGC 2 cut(s) 6, 908
HhaI GCGC 3 cut(s) 82, 160, 526
Hin6I GCGC 3 cut(s) 80, 158, 524
HinP1I GCGC 3 cut(s) 80, 158, 524
HpaII CCGG 3 cut(s) 174, 687, 931
HphI GGTGA 9 cut(s) 101, 690, 844, 965, 1321, 1324, 1403, 1710, 1999
Hpy166II GTNNAC 4 cut(s) 771, 1315, 1394, 1515
Hpy8I GTNNAC 4 cut(s) 771, 1315, 1394, 1515
Hpy99I CGWCG 1 cut(s) 902
HpyAV CCTTC 4 cut(s) 455, 794, 1079, 1681
HpyCH4III ACNGT 8 cut(s) 116, 416, 640, 992, 1168, 1195, 2015, 2353
HpyCH4IV ACGT 3 cut(s) 98, 1486, 1863
HpySE526I ACGT 3 cut(s) 98, 1486, 1863
HspAI GCGC 3 cut(s) 80, 158, 524
KflI GGGWCCC 1 cut(s) 864
Kpn2I TCCGGA 1 cut(s) 930
KpnI GGTACC 1 cut(s) 149
Ksp22I TGATCA 1 cut(s) 595
KspI CCGCGG 1 cut(s) 360
Kzo9I GATC 8 cut(s) 29, 153, 495, 595, 1289, 1600, 1978, 2263
LguI GCTCTTC 1 cut(s) 2094
LmnI GCTCC 2 cut(s) 1495, 2388
Lsp1109I GCAGC 2 cut(s) 737, 1240
LweI GCATC 3 cut(s) 370, 833, 2013
MaeI CTAG 5 cut(s) 134, 426, 1622, 1919, 2279
MaeII ACGT 3 cut(s) 98, 1486, 1863
MaeIII GTNAC 7 cut(s) 696, 832, 1029, 1699, 1859, 2287, 2294
MalI GATC 8 cut(s) 31, 155, 497, 597, 1291, 1602, 1980, 2265
MboI GATC 8 cut(s) 29, 153, 495, 595, 1289, 1600, 1978, 2263
MfeI CAATTG 2 cut(s) 476, 485
MflI RGATCY 2 cut(s) 29, 1600
MhlI GDGCHC 2 cut(s) 369, 543
MlsI TGGCCA 1 cut(s) 1346
MluNI TGGCCA 1 cut(s) 1346
MlyI GAGTC 6 cut(s) 131, 312, 612, 901, 1109, 1840
MmeI TCCRAC 1 cut(s) 1432
Mox20I TGGCCA 1 cut(s) 1346
Mph1103I ATGCAT 1 cut(s) 2189
MroI TCCGGA 1 cut(s) 930
MroXI GAANNNNTTC 4 cut(s) 181, 783, 1885, 2103
MscI TGGCCA 1 cut(s) 1346
MseI TTAA 7 cut(s) 351, 749, 798, 1422, 1983, 2169, 2207
MslI CAYNNNNRTG 4 cut(s) 52, 841, 1307, 1507
Msp20I TGGCCA 1 cut(s) 1346
MspA1I CMGCKG 3 cut(s) 151, 359, 728
MspI CCGG 3 cut(s) 174, 687, 931
MspR9I CCNGG 2 cut(s) 555, 2109
MunI CAATTG 2 cut(s) 476, 485
Mva1269I GAATGC 3 cut(s) 926, 1818, 2189
MvaI CCWGG 2 cut(s) 555, 2109
MvnI CGCG 3 cut(s) 158, 359, 524
NdeII GATC 8 cut(s) 29, 153, 495, 595, 1289, 1600, 1978, 2263
NlaIV GGNNCC 5 cut(s) 147, 178, 865, 866, 2384
NmuCI GTSAC 6 cut(s) 696, 832, 1029, 1699, 2287, 2294
NsiI ATGCAT 1 cut(s) 2189
NspI RCATGY 3 cut(s) 686, 1306, 2295
PaeR7I CTCGAG 1 cut(s) 1097
PagI TCATGA 2 cut(s) 592, 1665
PaqCI CACCTGC 2 cut(s) 709, 1729
PciI ACATGT 2 cut(s) 1302, 2291
PciSI GCTCTTC 1 cut(s) 2094
PcsI WCGNNNNNNNCGW 1 cut(s) 240
PctI GAATGC 3 cut(s) 926, 1818, 2189
PdmI GAANNNNTTC 4 cut(s) 181, 783, 1885, 2103
PflMI CCANNNNNTGG 1 cut(s) 560
PkrI GCNGC 4 cut(s) 70, 528, 727, 1255
PleI GAGTC 6 cut(s) 131, 312, 611, 901, 1108, 1839
PpsI GAGTC 6 cut(s) 131, 312, 611, 901, 1108, 1839
Ppu21I YACGTR 1 cut(s) 1487
PpuMI RGGWCCY 2 cut(s) 864, 2082
PscI ACATGT 2 cut(s) 1302, 2291
PshBI ATTAAT 1 cut(s) 749
Psp5II RGGWCCY 2 cut(s) 864, 2082
Psp6I CCWGG 2 cut(s) 553, 2107
PspEI GGTNACC 1 cut(s) 696
PspFI CCCAGC 1 cut(s) 728
PspGI CCWGG 2 cut(s) 553, 2107
PspN4I GGNNCC 5 cut(s) 147, 178, 865, 866, 2384
PspPI GGNCC 4 cut(s) 10, 864, 1123, 2082
PspPPI RGGWCCY 2 cut(s) 864, 2082
PsuI RGATCY 2 cut(s) 29, 1600
PvuII CAGCTG 1 cut(s) 728
RsaI GTAC 4 cut(s) 45, 147, 879, 2138
RsaNI GTAC 4 cut(s) 44, 146, 878, 2137
RseI CAYNNNNRTG 4 cut(s) 52, 841, 1307, 1507
SacII CCGCGG 1 cut(s) 360
SapI GCTCTTC 1 cut(s) 2094
SaqAI TTAA 7 cut(s) 351, 749, 798, 1422, 1983, 2169, 2207
SatI GCNGC 4 cut(s) 69, 527, 726, 1254
Sau3AI GATC 8 cut(s) 29, 153, 495, 595, 1289, 1600, 1978, 2263
Sau96I GGNCC 4 cut(s) 10, 864, 1123, 2082
SchI GAGTC 6 cut(s) 131, 312, 612, 901, 1109, 1840
ScrFI CCNGG 2 cut(s) 555, 2109
SduI GDGCHC 2 cut(s) 369, 543
SfaNI GCATC 3 cut(s) 370, 833, 2013
SfcI CTRYAG 1 cut(s) 1047
Sfr274I CTCGAG 1 cut(s) 1097
Sfr303I CCGCGG 1 cut(s) 360
SgrBI CCGCGG 1 cut(s) 360
SinI GGWCC 4 cut(s) 10, 864, 1123, 2082
SlaI CTCGAG 1 cut(s) 1097
SmiMI CAYNNNNRTG 4 cut(s) 52, 841, 1307, 1507
SmlI CTYRAG 3 cut(s) 282, 1097, 1439
SmoI CTYRAG 3 cut(s) 282, 1097, 1439
SsiI CCGC 6 cut(s) 8, 69, 149, 357, 359, 527
SspMI CTAG 5 cut(s) 134, 426, 1622, 1919, 2279
StyD4I CCNGG 2 cut(s) 553, 2107
StyI CCWWGG 1 cut(s) 1216
TaaI ACNGT 8 cut(s) 116, 416, 640, 992, 1168, 1195, 2015, 2353
TaiI ACGT 3 cut(s) 101, 1489, 1866
TaqI TCGA 8 cut(s) 234, 1091, 1098, 1479, 1782, 1826, 1935, 2114
TatI WGTACW 2 cut(s) 877, 2136
TauI GCSGC 2 cut(s) 71, 529
Tru1I TTAA 7 cut(s) 351, 749, 798, 1422, 1983, 2169, 2207
Tru9I TTAA 7 cut(s) 351, 749, 798, 1422, 1983, 2169, 2207
TscAI CASTG 3 cut(s) 550, 995, 2262
TseFI GTSAC 6 cut(s) 696, 832, 1029, 1699, 2287, 2294
TseI GCWGC 2 cut(s) 725, 1253
Tsp45I GTSAC 6 cut(s) 696, 832, 1029, 1699, 2287, 2294
TspGWI ACGGA 3 cut(s) 530, 756, 1532
TspRI CASTG 3 cut(s) 550, 995, 2262
Van91I CCANNNNNTGG 1 cut(s) 560
VpaK11BI GGWCC 4 cut(s) 10, 864, 1123, 2082
VspI ATTAAT 1 cut(s) 749
XapI RAATTY 8 cut(s) 196, 614, 671, 998, 1630, 1896, 2059, 2366
XceI RCATGY 3 cut(s) 686, 1306, 2295
XcmI CCANNNNNNNNNTGG 2 cut(s) 1339, 1509
XhoI CTCGAG 1 cut(s) 1097
XmiI GTMKAC 1 cut(s) 770
XmnI GAANNNNTTC 4 cut(s) 181, 783, 1885, 2103
XspI CTAG 5 cut(s) 134, 426, 1622, 1919, 2279
Zsp2I ATGCAT 1 cut(s) 2189
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.