MD02G1165300.v1.1

disease resistance

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
Physical Location & Seq
Forward (+)
14114137 .. 14117948
3812 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1165300.v1.1.491

Sequence Viewer

Length: 2466 bp
ATGAATGGAGCAGGCGGCCTTATCGGCGGGGCTGCTCTCGGAACAGCGTTCAATGTGCTGTATGATGTCCTCGATGAGCTGATTACCAAGAATGTAATTTTTAAGCCCCTCCTCAAAGAGATCAAATCCAGGTTAGACTCTTTGGCACCATTGTTGAAAGATATAGAAAAATCCAACAAGAAATTGGATCTATCGGATAAGGAACTGGTAAACTTGAAAGAACATTTGGAGGAGGGCGTAGAGGTCGTTCAGAAGTGCAAAAAGGTTCGATGGTGGAGCGTGTACAAAAGATACAAATACGCCAACAGGCTGATTGACTGGGATGGATCTCTTCAACGACTTTTGGAAATACTAAACGTTCAGGGAATAAGGGATATGAAGGACAGCTCCCTTTCGGTGAGGAATATAGAGAATGCGCTCAGCAGAATTGAATCGAATATGGTGATACCAAAACAACCCGACAGTGAAGCTTGGTGTGCAGTACCTCAACTTCCGCCGCTTGTGGTTGGATTGGATGTTCCTCTAAGGGAGTTGAAGAGGATTCTTCTAAAGGACCAAAATGTTTCAATGGTTGTGCTGACTGCTCCCGGAGGATGTGGGAAAACTACTTTGGCTACAAAGTTTTGTCAAGACACGGATGTCAAAGATACATTCAAGGATAATATCTTCTTCGTCACGGTTTCGAAAAAGCCTAAATTGGAAAATATTGTTCACGATCTATATCAACGCAAGGGTTTCCCGGTACCTACTTTCCAAAACGAAGTCGGTGCAGTGACGTTGCTGCAACTTTTTCTGAAGGAAGTAGGGCAGAATCCTTTACTGCTTGTCCTGGATGATGTTTGGTCTGGATCAGAATCCCTTGTGGAGAAGTTTCATCAAATCAAAACGGAAAATCACAAGTTTTTGGTGACATCTAGGTCTGAATTTCGGGGATATGGTATCCCTTATCATTTGCAATCATTGGATCATGACAATGCGATGAAGCTTTTTCATCATTCAGCATCCCTTGGAGATAAGAGCTCTCATATTCCAAAAGATCTTTCAGAAAAGATAGTTGAGCGTTGCAAGGGATTTCCACTTGCCATTACAGTGGTGGGGAGATCGCTTTGTGGGGAGCCTATAGAGATATGGCAAAAAAGAGTAATTGAATGGTCCAAAGGTTTTTCTATTCTTGATTCAGAGACTGAATTGCTTTTGTGCCTTGAACGAAGCTTGGGTGCCTTGGATAAAGAAATGGCTGCCATCAAGGAATGTTTCTTAGACTTAGGTTCATTTCCGGAAGACCAAAGAATTCCAGCTGCTGCCCTCATTGATATCTGGGCAGAGTTACATGATGTAGATACAGATATAGAGTGCATTGCAAACCTGTACGAGCTAACCAAACGAAGTCTAGCCAATCTTCTTGTTACAAGGAAGGACAAGATGGAGGGGGACGGATACTATAGTGAGCACTTTGTTACCCAGCATGATGTTCTTCGGGAGCTGGCTATCTACAACACAAAAAAGGGACCGGTTGAACATAGAAAAAGACTGATTATTGACATATGTGGAGACAATCTTCCAAAATGGTGGAGAGAACAGAAGCATCAGCCGATGAAGGCCCGCTTATTATCCATAACAACTGATGAAGGGTTTTCAACTAAATGGCACAAAATGCAAATGCCAGAAGTTGAGGTTTTAGTATTGAATTTCCAGACAAAGAACTATGGTTTACCCGAATCTGTGGTGAACATGGATGAATTGAAGGCTGTGATAGTCACAAATTATGGTTTCTTACCTGCTGAATTGAGTAACTTCCAACTTTTGAGTTCGTTACCAAATCTTAAGAGAATCAGATTAGAACGCATCTCAATTCTTTCCATAACCAAGAATCCCATACAATTGGCGAGTCTGAAGAAGATATCCTTGTTCATGTGTAATATTGGTCAAGCTTTCAATAACTGTTCCATCTCAATCTCATCAGCATTCCCGAATCTAGAGGAAATGAACATCGACTATTGCAGTGATTTAATTGAATTACCCGCCGAGGTTTGTGATCTTAGTAAACTAAGGAAGCTCAGTGTCACCAACTGTCATAAGTTATCTGCCTTGCCTGAAGGGATTGGAAAGTTGGAAAATTTAGAATTGTTGAGGCTAAGATCCTGCACAGAACTGTCAAAGCTTCCAACCTCGTTGAAGAACCTTGGAAAGGTAAACTTTCTTGATATATCTGATTGCTTCAGCATCAAGGTGTTGCCCGAAGACATTGGTGAAATGAGTAGTTTAAGAAAGATCAACATGAGGCAATGCTCAAGGTTGCAAGAGCTACCTCCATCAGTCATGGATCTTGAGCAGTTAGAGGAAGTGGTCTGTGATGAAGAGACAAAAGATTTATGGGAATCTTTCTCGTCGTGTCTCAACAACGTAAGGATAATTGTGGACAAAGAGAATATGAACCTAAATTGGCTCCACAAGACTCACTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

822

Amino Acids

93.31

Weight (kDa)

6.13

Isoelectric Point (pI)

43.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RPW8 PF05659 7 - 137 3.4e-28 Arabidopsis broad-spectrum mildew resistance protein RPW8
NB-ARC PF00931 175 - 333 4.8e-14 NB-ARC domain
LRR_14 PF23598 653 - 803 9.5e-14 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 638, 916
Acc36I ACCTGC 1 cut(s) 1786
Acc65I GGTACC 1 cut(s) 742
AccB1I GGYRCC 3 cut(s) 145, 742, 1217
AccIII TCCGGA 1 cut(s) 1276
AciI CCGC 6 cut(s) 15, 27, 494, 497, 1603, 2022
AclI AACGTT 1 cut(s) 357
AclWI GGATC 6 cut(s) 195, 334, 856, 972, 2133, 2331
AcsI RAATTY 4 cut(s) 923, 1290, 1687, 2116
AcuI CTGAAG 4 cut(s) 815, 1913, 2115, 2203
AfaI GTAC 4 cut(s) 284, 483, 744, 1370
AfiI CCNNNNNNNGG 1 cut(s) 2188
AflII CTTAAG 1 cut(s) 1823
AgeI ACCGGT 1 cut(s) 1510
AjnI CCWGG 2 cut(s) 128, 828
AjuI GAANNNNNNNTTGG 6 cut(s) 209, 241, 593, 625, 1024, 1056
AloI GAACNNNNNNTCC 2 cut(s) 501, 533
Alw21I GWGCWC 2 cut(s) 1022, 1452
Alw26I GTCTC 4 cut(s) 1175, 1545, 2354, 2399
AlwI GGATC 6 cut(s) 195, 334, 856, 972, 2133, 2331
AlwNI CAGNNNCTG 2 cut(s) 1184, 1301
Aor13HI TCCGGA 1 cut(s) 1276
AoxI GGCC 2 cut(s) 16, 1599
ApeKI GCWGC 5 cut(s) 32, 781, 1238, 1298, 1301
ApoI RAATTY 4 cut(s) 923, 1290, 1687, 2116
AsiGI ACCGGT 1 cut(s) 1510
Asp718I GGTACC 1 cut(s) 742
AspLEI GCGC 1 cut(s) 418
AspS9I GGNCC 4 cut(s) 553, 1152, 1508, 1600
AsuC2I CCSGG 2 cut(s) 588, 740
AsuHPI GGTGA 6 cut(s) 409, 454, 919, 1738, 2056, 2261
AsuII TTCGAA 1 cut(s) 683
AvaII GGWCC 3 cut(s) 553, 1152, 1508
BaeI ACNNNNGTAYC 2 cut(s) 1429, 1462
BanI GGYRCC 3 cut(s) 145, 742, 1217
BanII GRGCYC 1 cut(s) 1022
BarI GAAGNNNNNNTAC 2 cut(s) 474, 506
BbsI GAAGAC 2 cut(s) 1287, 2247
Bbv12I GWGCWC 2 cut(s) 1022, 1452
BbvI GCAGC 5 cut(s) 19, 768, 1225, 1285, 1288
BccI CCATC 6 cut(s) 264, 317, 1250, 1417, 1955, 2320
BcgI CGANNNNNNTGC 2 cut(s) 749, 783
BciT130I CCWGG 2 cut(s) 130, 830
BciVI GTATCC 2 cut(s) 950, 1430
BcnI CCSGG 2 cut(s) 588, 740
BcoDI GTCTC 4 cut(s) 1175, 1545, 2354, 2399
BfaI CTAG 3 cut(s) 915, 1391, 1976
BfmI CTRYAG 2 cut(s) 1119, 1441
BfrI CTTAAG 1 cut(s) 1823
BfuAI ACCTGC 1 cut(s) 1786
BfuI GTATCC 2 cut(s) 950, 1430
BglI GCCNNNNNGGC 1 cut(s) 24
BglII AGATCT 1 cut(s) 1036
BisI GCNGC 7 cut(s) 16, 33, 497, 782, 1239, 1299, 1302
BlpI GCTNAGC 1 cut(s) 419
BlsI GCNGC 7 cut(s) 17, 34, 498, 783, 1240, 1300, 1303
Bme1390I CCNGG 4 cut(s) 130, 588, 740, 830
Bme18I GGWCC 3 cut(s) 553, 1152, 1508
BmgT120I GGNCC 4 cut(s) 553, 1152, 1508, 1600
BmiI GGNNCC 6 cut(s) 147, 744, 1116, 1219, 1509, 2447
BmrFI CCNGG 4 cut(s) 130, 588, 740, 830
BmrI ACTGGG 1 cut(s) 328
BmsI GCATC 4 cut(s) 1010, 1594, 1854, 2232
BmuI ACTGGG 1 cut(s) 328
BpiI GAAGAC 2 cut(s) 1287, 2247
Bpu1102I GCTNAGC 1 cut(s) 419
Bpu14I TTCGAA 1 cut(s) 683
BpuEI CTTGAG 2 cut(s) 2275, 2348
BpuMI CCSGG 2 cut(s) 588, 740
BsaBI GATNNNNATC 2 cut(s) 720, 853
BsaJI CCNNGG 4 cut(s) 1006, 1221, 2025, 2182
BsaWI WCCGGW 2 cut(s) 1276, 1510
Bsc4I CCNNNNNNNGG 1 cut(s) 2188
Bse118I RCCGGY 1 cut(s) 1510
Bse1I ACTGG 2 cut(s) 210, 323
Bse3DI GCAATG 2 cut(s) 1356, 2291
Bse8I GATNNNNATC 2 cut(s) 720, 853
BseAI TCCGGA 1 cut(s) 1276
BseBI CCWGG 2 cut(s) 130, 830
BseDI CCNNGG 4 cut(s) 1006, 1221, 2025, 2182
BseGI GGATG 7 cut(s) 328, 520, 599, 643, 838, 1001, 1741
BseJI GATNNNNATC 2 cut(s) 720, 853
BseLI CCNNNNNNNGG 1 cut(s) 2188
BseMI GCAATG 2 cut(s) 1356, 2291
BseMII CTCAG 2 cut(s) 433, 2071
BseNI ACTGG 2 cut(s) 210, 323
BseRI GAGGAG 2 cut(s) 101, 245
BseXI GCAGC 5 cut(s) 19, 768, 1225, 1285, 1288
BseYI CCCAGC 1 cut(s) 1461
BsgI GTGCAG 3 cut(s) 498, 789, 2128
BshFI GGCC 2 cut(s) 18, 1601
BshNI GGYRCC 3 cut(s) 145, 742, 1217
BshTI ACCGGT 1 cut(s) 1510
BsiHKAI GWGCWC 2 cut(s) 1022, 1452
BsiSI CCGG 4 cut(s) 588, 740, 1277, 1511
BslFI GGGAC 2 cut(s) 1445, 1521
BslI CCNNNNNNNGG 1 cut(s) 2188
BsmAI GTCTC 4 cut(s) 1175, 1545, 2354, 2399
BsmFI GGGAC 2 cut(s) 1445, 1521
BsmI GAATGC 2 cut(s) 418, 1964
BsnI GGCC 2 cut(s) 18, 1601
Bsp119I TTCGAA 1 cut(s) 683
Bsp1286I GDGCHC 2 cut(s) 1022, 1452
Bsp13I TCCGGA 1 cut(s) 1276
Bsp1407I TGTACA 1 cut(s) 282
Bsp1720I GCTNAGC 1 cut(s) 419
BspACI CCGC 6 cut(s) 15, 27, 494, 497, 1603, 2022
BspANI GGCC 2 cut(s) 18, 1601
BspCNI CTCAG 2 cut(s) 432, 2070
BspEI TCCGGA 1 cut(s) 1276
BspHI TCATGA 1 cut(s) 967
BspLI GGNNCC 6 cut(s) 147, 744, 1116, 1219, 1509, 2447
BspMI ACCTGC 1 cut(s) 1786
BspPI GGATC 6 cut(s) 195, 334, 856, 972, 2133, 2331
BspT104I TTCGAA 1 cut(s) 683
BspT107I GGYRCC 3 cut(s) 145, 742, 1217
BspTI CTTAAG 1 cut(s) 1823
BsrDI GCAATG 2 cut(s) 1356, 2291
BsrFI RCCGGY 1 cut(s) 1510
BsrGI TGTACA 1 cut(s) 282
BsrI ACTGG 2 cut(s) 210, 323
BssAI RCCGGY 1 cut(s) 1510
BssECI CCNNGG 4 cut(s) 1006, 1221, 2025, 2182
BssT1I CCWWGG 3 cut(s) 1006, 1221, 2182
Bst2UI CCWGG 2 cut(s) 130, 830
Bst4CI ACNGT 6 cut(s) 464, 679, 1090, 1943, 2072, 2154
Bst6I CTCTTC 3 cut(s) 336, 530, 2352
BstAFI CTTAAG 1 cut(s) 1823
BstAPI GCANNNNNTGC 1 cut(s) 1654
BstAUI TGTACA 1 cut(s) 282
BstBI TTCGAA 1 cut(s) 683
BstC8I GCNNGC 3 cut(s) 13, 1485, 1603
BstDEI CTNAG 8 cut(s) 419, 524, 1258, 1264, 2039, 2048, 2057, 2135
BstENI CCTNNNNNAGG 1 cut(s) 2186
BstF5I GGATG 7 cut(s) 328, 520, 599, 643, 838, 1001, 1741
BstHHI GCGC 1 cut(s) 418
BstMAI GTCTC 4 cut(s) 1175, 1545, 2354, 2399
BstMWI GCNNNNNNNGC 3 cut(s) 24, 476, 1654
BstNI CCWGG 2 cut(s) 130, 830
BstSCI CCNGG 4 cut(s) 128, 586, 738, 828
BstSFI CTRYAG 2 cut(s) 1119, 1441
BstV1I GCAGC 5 cut(s) 19, 768, 1225, 1285, 1288
BstV2I GAAGAC 2 cut(s) 1287, 2247
BstX2I RGATCY 5 cut(s) 187, 326, 1036, 2138, 2323
BstXI CCANNNNNNTGG 3 cut(s) 1090, 1569, 1882
BstYI RGATCY 5 cut(s) 187, 326, 1036, 2138, 2323
BsuI GTATCC 2 cut(s) 950, 1430
BsuRI GGCC 2 cut(s) 18, 1601
BtgZI GCGATG 1 cut(s) 992
BtsCI GGATG 7 cut(s) 328, 520, 599, 643, 838, 1001, 1741
BtsI GCAGTG 2 cut(s) 777, 2008
BtsIMutI CAGTG 5 cut(s) 469, 777, 1095, 2008, 2065
BveI ACCTGC 1 cut(s) 1786
Cac8I GCNNGC 3 cut(s) 13, 1485, 1603
CaiI CAGNNNCTG 2 cut(s) 1184, 1301
CciI TCATGA 1 cut(s) 967
CfoI GCGC 1 cut(s) 418
Cfr10I RCCGGY 1 cut(s) 1510
Cfr13I GGNCC 4 cut(s) 553, 1152, 1508, 1600
Csp6I GTAC 4 cut(s) 283, 482, 743, 1369
CspAI ACCGGT 1 cut(s) 1510
CviAII CATG 7 cut(s) 968, 1331, 1466, 1732, 1912, 2278, 2320
CviQI GTAC 4 cut(s) 283, 482, 743, 1369
DdeI CTNAG 8 cut(s) 419, 524, 1258, 1264, 2039, 2048, 2057, 2135
DrdI GACNNNNNNGTC 2 cut(s) 638, 916
DseDI GACNNNNNNGTC 2 cut(s) 638, 916
Eam1104I CTCTTC 3 cut(s) 336, 530, 2352
EarI CTCTTC 3 cut(s) 336, 530, 2352
EciI GGCGGA 1 cut(s) 483
Ecl136II GAGCTC 1 cut(s) 1020
Eco130I CCWWGG 3 cut(s) 1006, 1221, 2182
Eco24I GRGCYC 1 cut(s) 1022
Eco32I GATATC 2 cut(s) 1315, 1902
Eco47I GGWCC 3 cut(s) 553, 1152, 1508
Eco53kI GAGCTC 1 cut(s) 1020
Eco57I CTGAAG 4 cut(s) 815, 1913, 2115, 2203
EcoICRI GAGCTC 1 cut(s) 1020
EcoNI CCTNNNNNAGG 1 cut(s) 2186
EcoRI GAATTC 1 cut(s) 1290
EcoRII CCWGG 2 cut(s) 128, 828
EcoRV GATATC 2 cut(s) 1315, 1902
EcoT14I CCWWGG 3 cut(s) 1006, 1221, 2182
EcoT38I GRGCYC 1 cut(s) 1022
ErhI CCWWGG 3 cut(s) 1006, 1221, 2182
FaeI CATG 7 cut(s) 971, 1334, 1469, 1735, 1915, 2281, 2323
FalI AAGNNNNNCTT 7 cut(s) 1589, 1621, 1889, 1921, 2180, 2212, 2444
FaqI GGGAC 2 cut(s) 1445, 1521
FatI CATG 7 cut(s) 967, 1330, 1465, 1731, 1911, 2277, 2319
FauI CCCGC 3 cut(s) 20, 1610, 2029
FauNDI CATATG 1 cut(s) 1544
Fnu4HI GCNGC 7 cut(s) 16, 33, 497, 782, 1239, 1299, 1302
FokI GGATG 7 cut(s) 335, 527, 606, 650, 845, 988, 1748
FriOI GRGCYC 1 cut(s) 1022
Fsp4HI GCNGC 7 cut(s) 16, 33, 497, 782, 1239, 1299, 1302
FspBI CTAG 3 cut(s) 915, 1391, 1976
GlaI GCGC 1 cut(s) 417
GluI GCNGC 7 cut(s) 16, 33, 497, 782, 1239, 1299, 1302
GsaI CCCAGC 1 cut(s) 1465
HaeIII GGCC 2 cut(s) 18, 1601
HapII CCGG 4 cut(s) 588, 740, 1277, 1511
HhaI GCGC 1 cut(s) 418
Hin1II CATG 7 cut(s) 971, 1334, 1469, 1735, 1915, 2281, 2323
Hin6I GCGC 1 cut(s) 416
HinP1I GCGC 1 cut(s) 416
HindIII AAGCTT 5 cut(s) 468, 983, 1210, 1929, 2159
HpaII CCGG 4 cut(s) 588, 740, 1277, 1511
HphI GGTGA 6 cut(s) 409, 454, 919, 1738, 2056, 2261
Hpy166II GTNNAC 8 cut(s) 211, 283, 712, 1712, 1729, 2045, 2194, 2419
Hpy8I GTNNAC 8 cut(s) 211, 283, 712, 1712, 1729, 2045, 2194, 2419
Hpy99I CGWCG 1 cut(s) 2392
HpyAV CCTTC 7 cut(s) 373, 790, 1408, 1591, 1622, 1738, 2090
HpyCH4III ACNGT 6 cut(s) 464, 679, 1090, 1943, 2072, 2154
HpyCH4IV ACGT 3 cut(s) 357, 776, 2403
HpyF10VI GCNNNNNNNGC 3 cut(s) 24, 476, 1654
HpyF3I CTNAG 8 cut(s) 419, 524, 1258, 1264, 2039, 2048, 2057, 2135
HpySE526I ACGT 3 cut(s) 357, 776, 2403
Hsp92II CATG 7 cut(s) 971, 1334, 1469, 1735, 1915, 2281, 2323
HspAI GCGC 1 cut(s) 416
Kpn2I TCCGGA 1 cut(s) 1276
KpnI GGTACC 1 cut(s) 746
LmnI GCTCC 7 cut(s) 8, 276, 392, 589, 1114, 1480, 2451
Lsp1109I GCAGC 5 cut(s) 19, 768, 1225, 1285, 1288
LweI GCATC 4 cut(s) 1010, 1594, 1854, 2232
MaeI CTAG 3 cut(s) 915, 1391, 1976
MaeII ACGT 3 cut(s) 357, 776, 2403
MfeI CAATTG 1 cut(s) 1880
MflI RGATCY 5 cut(s) 187, 326, 1036, 2138, 2323
MhlI GDGCHC 2 cut(s) 1022, 1452
MlyI GAGTC 3 cut(s) 131, 1897, 2449
MmeI TCCRAC 5 cut(s) 198, 487, 1822, 2091, 2189
MroI TCCGGA 1 cut(s) 1276
MseI TTAA 4 cut(s) 102, 1824, 2009, 2264
MslI CAYNNNNRTG 3 cut(s) 972, 1088, 2228
MspA1I CMGCKG 1 cut(s) 1298
MspCI CTTAAG 1 cut(s) 1823
MspI CCGG 4 cut(s) 588, 740, 1277, 1511
MspR9I CCNGG 4 cut(s) 130, 588, 740, 830
MunI CAATTG 1 cut(s) 1880
Mva1269I GAATGC 2 cut(s) 418, 1964
MvaI CCWGG 2 cut(s) 130, 830
MwoI GCNNNNNNNGC 3 cut(s) 24, 476, 1654
NciI CCSGG 2 cut(s) 588, 740
NdeI CATATG 1 cut(s) 1544
NlaIII CATG 7 cut(s) 971, 1334, 1469, 1735, 1915, 2281, 2323
NlaIV GGNNCC 6 cut(s) 147, 744, 1116, 1219, 1509, 2447
NmeAIII GCCGAG 1 cut(s) 2050
NmuCI GTSAC 5 cut(s) 673, 772, 907, 1756, 2062
NspV TTCGAA 1 cut(s) 683
PagI TCATGA 1 cut(s) 967
PctI GAATGC 2 cut(s) 418, 1964
PfoI TCCNGGA 2 cut(s) 586, 828
PinAI ACCGGT 1 cut(s) 1510
PkrI GCNGC 7 cut(s) 17, 34, 498, 783, 1240, 1300, 1303
PleI GAGTC 3 cut(s) 131, 1896, 2449
PpsI GAGTC 3 cut(s) 131, 1896, 2449
Psp124BI GAGCTC 1 cut(s) 1022
Psp1406I AACGTT 1 cut(s) 357
Psp6I CCWGG 2 cut(s) 128, 828
PspFI CCCAGC 1 cut(s) 1461
PspGI CCWGG 2 cut(s) 128, 828
PspN4I GGNNCC 6 cut(s) 147, 744, 1116, 1219, 1509, 2447
PspPI GGNCC 4 cut(s) 553, 1152, 1508, 1600
PsrI GAACNNNNNNTAC 2 cut(s) 231, 263
PstNI CAGNNNCTG 2 cut(s) 1184, 1301
PsuI RGATCY 5 cut(s) 187, 326, 1036, 2138, 2323
PvuII CAGCTG 1 cut(s) 1298
RsaI GTAC 4 cut(s) 284, 483, 744, 1370
RsaNI GTAC 4 cut(s) 283, 482, 743, 1369
RseI CAYNNNNRTG 3 cut(s) 972, 1088, 2228
SacI GAGCTC 1 cut(s) 1022
SaqAI TTAA 4 cut(s) 102, 1824, 2009, 2264
SatI GCNGC 7 cut(s) 16, 33, 497, 782, 1239, 1299, 1302
Sau96I GGNCC 4 cut(s) 553, 1152, 1508, 1600
SchI GAGTC 3 cut(s) 131, 1897, 2449
ScrFI CCNGG 4 cut(s) 130, 588, 740, 830
SduI GDGCHC 2 cut(s) 1022, 1452
SfaNI GCATC 4 cut(s) 1010, 1594, 1854, 2232
SfcI CTRYAG 2 cut(s) 1119, 1441
SfuI TTCGAA 1 cut(s) 683
SinI GGWCC 3 cut(s) 553, 1152, 1508
SmiMI CAYNNNNRTG 3 cut(s) 972, 1088, 2228
SmlI CTYRAG 3 cut(s) 1823, 2290, 2327
SmoI CTYRAG 3 cut(s) 1823, 2290, 2327
SsiI CCGC 6 cut(s) 15, 27, 494, 497, 1603, 2022
SspI AATATT 2 cut(s) 706, 1921
SspMI CTAG 3 cut(s) 915, 1391, 1976
SstI GAGCTC 1 cut(s) 1022
StyD4I CCNGG 4 cut(s) 128, 586, 738, 828
StyI CCWWGG 3 cut(s) 1006, 1221, 2182
TaaI ACNGT 6 cut(s) 464, 679, 1090, 1943, 2072, 2154
TaiI ACGT 3 cut(s) 360, 779, 2406
TaqI TCGA 5 cut(s) 72, 268, 434, 683, 1992
TatI WGTACW 1 cut(s) 282
TauI GCSGC 2 cut(s) 18, 499
Tru1I TTAA 4 cut(s) 102, 1824, 2009, 2264
Tru9I TTAA 4 cut(s) 102, 1824, 2009, 2264
TscAI CASTG 5 cut(s) 469, 777, 1095, 2008, 2065
TseFI GTSAC 5 cut(s) 673, 772, 907, 1756, 2062
TseI GCWGC 5 cut(s) 32, 781, 1238, 1298, 1301
Tsp45I GTSAC 5 cut(s) 673, 772, 907, 1756, 2062
TspGWI ACGGA 3 cut(s) 650, 902, 1449
TspRI CASTG 5 cut(s) 469, 777, 1095, 2008, 2065
Vha464I CTTAAG 1 cut(s) 1823
VpaK11BI GGWCC 3 cut(s) 553, 1152, 1508
XagI CCTNNNNNAGG 1 cut(s) 2186
XapI RAATTY 4 cut(s) 923, 1290, 1687, 2116
XbaI TCTAGA 1 cut(s) 1975
XcmI CCANNNNNNNNNTGG 2 cut(s) 181, 1090
XspI CTAG 3 cut(s) 915, 1391, 1976
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.