Rmu_sc0000676.1_g000017

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000676.1
OG0000039
Physical Location & Seq
Reverse (-)
38569 .. 45794
7226 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000676.1_g000017.1.cds

Sequence Viewer

Length: 2085 bp
atggttggtggaggtgatgtttttggtggggctgctggaggattgctgttcaatgttctctatgatgcgcttaaagaggtcatcagcaagtctatgatatatagacctctcctccaaaacattctatctgcgctagactcatatggaccagtgatcaagcagatagaagcaagcaatgaggaactgggtcttccaaaggaggaagtagaaaagttcaaagcacatatgaagaatggcatagagatagtccggaagtgctctaaggttcgcaagtggaacatctacaagaagtacaagtacgccaacaaacttcttggatgggatggtgctcttgtaagacagttggatgtactgaaggcgcagggagtaagggatgggaagaagaccttggtttcgaagaatattcaatctaaagccaaagtcgacggcatcgaagccaagctaaaagctctagagccggggatccgagacatggtgaagagtaatgaggtactagattgcccaaggaacgaactaaaagatttaacagaagttatggagactggcatcaagctcactgtcaagtgctcaaagtctcggtggtgggagcccttctggaagtacaaatacgccatcaaacttactgaatgggagaaactggttgtgaaaaatgtggagactttggtagggaatatagaggagaaattggaaattgtgatacaaaatccacctggggaacctaaggccaggatgagtactgaagaacctgaagttccaggttttacagtgggattggacaagcatttgaaggaattgaagatgaagcttctcaaggatggggtgtcaatgcttgtaataacagctcctggagggtctggcaaaaccactttggctaaaatgttttatcatgatcatgaagtcaaagataaattccccaagaacatatttgtttctgtttcaacaaagtccaactgtattgttgtacaagaactatgtcaaaaattgggatcccaggaatctgcattctcaaatgaagacattgcattcagctggctgaagaaatttctgatggaaacagcacaaaagcctttgcttctcatcctggatgatgtttggtatgaatcgaaatcccttcttgagaagtgtaatgaaccaagtatacaagcaaatctcagtatcttggtgacatcaagatcttcatttccaagtgtcggttgtcaatatcctttagatgcattgaatcacaaagatgcaatgactcttttttgccattcagtccagggagataagagctacaaggttccagaaagacttcatgaccagatagtaaggcgctgtaagggttgtccacttgccattaaagtggtcggaaaatctctttgtggagaaattacagagtcatggcttaaaaaattaaccgagtggtctgaaggtgcttctatttttgataccgagactgaagtacttctttgcctcaaaagtagcttagacgctttggatgaaaaagatcaaactatcaaggaatgcttcttggacctgggtgcatttcctgaagatcaaagaatcccagctgttgctctgattgatatgtgggcagagctatatggcataaaagattttctttccattataaagctccaggagctttccagacgaagcctggctaatcttgtagtcacaaggaaggaaaagatggaggcagatggctactacagtgaacactttgtttcccagcatgatctgcttagggatctagctatattccaagcgaaattagatccaaataaaacgagactgattttagacaaatgtggagacaaagtacccaagaagttgacagaaccgaagcatcaatcctttcgcactcgcatattatccatctgctctgatggagcgttctcaacagatatgcacaatattcaactttcagatgttgaggttctagttttgaattttcagtcagagaactatgctttacccaaatttgtggcggacatggaaaacttgaaggtcctaaaagtcacaaataatggttccttgccagttgaattgagtaactttcaactactggattccttgccaaatctgaagagaatcagactatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
NB-ARC RPW8

Protein Analysis

694

Amino Acids

78.36

Weight (kDa)

8.38

Isoelectric Point (pI)

40.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1610
AccI GTMKAC 2 cut(s) 423, 1138
AccIII TCCGGA 1 cut(s) 249
AciI CCGC 1 cut(s) 1970
AclWI GGATC 6 cut(s) 457, 470, 981, 994, 1737, 1751
AcsI RAATTY 4 cut(s) 908, 1040, 1930, 1961
AcuI CTGAAG 7 cut(s) 374, 759, 768, 1055, 1428, 1458, 1551
AfaI GTAC 9 cut(s) 293, 299, 351, 492, 602, 736, 963, 1443, 1803
AfiI CCNNNNNNNGG 2 cut(s) 472, 1190
AjuI GAANNNNNNNTTGG 2 cut(s) 371, 403
Alw21I GWGCWC 3 cut(s) 260, 331, 569
Alw26I GTCTC 7 cut(s) 462, 533, 579, 650, 1427, 1765, 1788
AlwI GGATC 6 cut(s) 457, 470, 981, 994, 1737, 1751
AlwNI CAGNNNCTG 1 cut(s) 845
Aor13HI TCCGGA 1 cut(s) 249
AoxI GGCC 1 cut(s) 723
ApeKI GCWGC 1 cut(s) 32
ApoI RAATTY 4 cut(s) 908, 1040, 1930, 1961
ArsI GACNNNNNNTTYG 2 cut(s) 376, 408
Asp700I GAANNNNTTC 2 cut(s) 1290, 1443
AspLEI GCGC 4 cut(s) 70, 133, 361, 1314
AspS9I GGNCC 3 cut(s) 146, 1513, 1990
AsuC2I CCSGG 1 cut(s) 459
AsuHPI GGTGA 3 cut(s) 26, 487, 1174
AsuII TTCGAA 1 cut(s) 395
AvaII GGWCC 3 cut(s) 146, 1513, 1990
AxyI CCTNAGG 1 cut(s) 720
BamHI GGATCC 2 cut(s) 462, 986
BanII GRGCYC 1 cut(s) 591
BarI GAAGNNNNNNTAC 4 cut(s) 281, 313, 590, 622
BbsI GAAGAC 3 cut(s) 182, 389, 1020
Bbv12I GWGCWC 3 cut(s) 260, 331, 569
BbvI GCAGC 1 cut(s) 19
BceAI ACGGC 1 cut(s) 442
BclI TGATCA 2 cut(s) 153, 889
BcnI CCSGG 1 cut(s) 459
BcoDI GTCTC 7 cut(s) 462, 533, 579, 650, 1427, 1765, 1788
BfaI CTAG 5 cut(s) 134, 452, 494, 1733, 1922
BfmI CTRYAG 2 cut(s) 1690, 2081
BfoI RGCGCY 1 cut(s) 1315
BglII AGATCT 1 cut(s) 1172
BisI GCNGC 1 cut(s) 33
BlsI GCNGC 1 cut(s) 34
BmcAI AGTACT 2 cut(s) 736, 1443
Bme18I GGWCC 3 cut(s) 146, 1513, 1990
BmgT120I GGNCC 3 cut(s) 146, 1513, 1990
BmiI GGNNCC 6 cut(s) 464, 588, 717, 988, 1281, 2014
BmrI ACTGGG 1 cut(s) 194
BmsI GCATC 6 cut(s) 55, 438, 555, 1201, 1219, 1837
BmuI ACTGGG 1 cut(s) 194
BpiI GAAGAC 3 cut(s) 182, 389, 1020
BpmI CTGGAG 3 cut(s) 57, 867, 1601
Bpu10I CCTNAGC 1 cut(s) 1724
Bpu14I TTCGAA 1 cut(s) 395
BpuEI CTTGAG 2 cut(s) 794, 1136
BpuMI CCSGG 1 cut(s) 459
BsaJI CCNNGG 7 cut(s) 387, 458, 503, 710, 990, 1258, 1516
BsaWI WCCGGW 1 cut(s) 249
BsaXI ACNNNNNCTCC 5 cut(s) 33, 96, 126, 1785, 1815
Bsc4I CCNNNNNNNGG 2 cut(s) 472, 1190
Bse1I ACTGG 6 cut(s) 149, 189, 547, 642, 2021, 2052
Bse21I CCTNAGG 1 cut(s) 720
Bse3DI GCAATG 3 cut(s) 181, 1017, 1239
BseAI TCCGGA 1 cut(s) 249
BseDI CCNNGG 7 cut(s) 387, 458, 503, 710, 990, 1258, 1516
BseGI GGATG 9 cut(s) 323, 328, 352, 379, 735, 820, 1077, 1090, 1483
BseLI CCNNNNNNNGG 2 cut(s) 472, 1190
BseMI GCAATG 3 cut(s) 181, 1017, 1239
BseMII CTCAG 1 cut(s) 1165
BseNI ACTGG 6 cut(s) 149, 189, 547, 642, 2021, 2052
BseRI GAGGAG 2 cut(s) 101, 692
BseXI GCAGC 1 cut(s) 19
BseYI CCCAGC 2 cut(s) 1546, 1710
BshFI GGCC 1 cut(s) 725
BsiHKAI GWGCWC 3 cut(s) 260, 331, 569
BsiSI CCGG 2 cut(s) 250, 458
BslI CCNNNNNNNGG 2 cut(s) 472, 1190
BsmAI GTCTC 7 cut(s) 462, 533, 579, 650, 1427, 1765, 1788
BsmI GAATGC 3 cut(s) 1001, 1022, 1508
BsnI GGCC 1 cut(s) 725
Bsp119I TTCGAA 1 cut(s) 395
Bsp1286I GDGCHC 4 cut(s) 260, 331, 569, 591
Bsp13I TCCGGA 1 cut(s) 249
Bsp1407I TGTACA 1 cut(s) 961
BspACI CCGC 1 cut(s) 1970
BspANI GGCC 1 cut(s) 725
BspCNI CTCAG 1 cut(s) 1164
BspEI TCCGGA 1 cut(s) 249
BspHI TCATGA 3 cut(s) 886, 892, 1294
BspLI GGNNCC 6 cut(s) 464, 588, 717, 988, 1281, 2014
BspPI GGATC 6 cut(s) 457, 470, 981, 994, 1737, 1751
BspT104I TTCGAA 1 cut(s) 395
BsrDI GCAATG 3 cut(s) 181, 1017, 1239
BsrGI TGTACA 1 cut(s) 961
BsrI ACTGG 6 cut(s) 149, 189, 547, 642, 2021, 2052
BssECI CCNNGG 7 cut(s) 387, 458, 503, 710, 990, 1258, 1516
BssNAI GTATAC 1 cut(s) 1139
BssT1I CCWWGG 2 cut(s) 387, 503
Bst1107I GTATAC 1 cut(s) 1139
Bst4CI ACNGT 5 cut(s) 342, 559, 766, 953, 1694
Bst6I CTCTTC 2 cut(s) 473, 2063
BstAPI GCANNNNNTGC 1 cut(s) 1720
BstAUI TGTACA 1 cut(s) 961
BstBI TTCGAA 1 cut(s) 395
BstC8I GCNNGC 2 cut(s) 172, 1031
BstDEI CTNAG 5 cut(s) 261, 720, 1151, 1465, 1724
BstF5I GGATG 9 cut(s) 323, 328, 352, 379, 735, 820, 1077, 1090, 1483
BstH2I RGCGCY 1 cut(s) 1315
BstHHI GCGC 4 cut(s) 70, 133, 361, 1314
BstMAI GTCTC 7 cut(s) 462, 533, 579, 650, 1427, 1765, 1788
BstMWI GCNNNNNNNGC 2 cut(s) 1621, 1720
BstSFI CTRYAG 2 cut(s) 1690, 2081
BstV1I GCAGC 1 cut(s) 19
BstV2I GAAGAC 3 cut(s) 182, 389, 1020
BstX2I RGATCY 5 cut(s) 462, 986, 1172, 1729, 1756
BstXI CCANNNNNNTGG 2 cut(s) 1342, 1966
BstYI RGATCY 5 cut(s) 462, 986, 1172, 1729, 1756
BstZ17I GTATAC 1 cut(s) 1139
Bsu36I CCTNAGG 1 cut(s) 720
BsuRI GGCC 1 cut(s) 725
BtsCI GGATG 9 cut(s) 323, 328, 352, 379, 735, 820, 1077, 1090, 1483
BtsIMutI CAGTG 4 cut(s) 156, 555, 771, 1699
Cac8I GCNNGC 2 cut(s) 172, 1031
CaiI CAGNNNCTG 1 cut(s) 845
CciI TCATGA 3 cut(s) 886, 892, 1294
CfoI GCGC 4 cut(s) 70, 133, 361, 1314
Cfr13I GGNCC 3 cut(s) 146, 1513, 1990
CseI GACGC 1 cut(s) 1478
Csp6I GTAC 9 cut(s) 292, 298, 350, 491, 601, 735, 962, 1442, 1802
CviAII CATG 7 cut(s) 472, 887, 893, 1295, 1380, 1715, 1975
CviQI GTAC 9 cut(s) 292, 298, 350, 491, 601, 735, 962, 1442, 1802
DdeI CTNAG 5 cut(s) 261, 720, 1151, 1465, 1724
Eam1104I CTCTTC 2 cut(s) 473, 2063
EarI CTCTTC 2 cut(s) 473, 2063
EciI GGCGGA 1 cut(s) 1985
Eco130I CCWWGG 2 cut(s) 387, 503
Eco24I GRGCYC 1 cut(s) 591
Eco47I GGWCC 3 cut(s) 146, 1513, 1990
Eco57I CTGAAG 7 cut(s) 374, 759, 768, 1055, 1428, 1458, 1551
Eco81I CCTNAGG 1 cut(s) 720
EcoO109I RGGNCCY 1 cut(s) 1990
EcoT14I CCWWGG 2 cut(s) 387, 503
EcoT22I ATGCAT 1 cut(s) 1216
EcoT38I GRGCYC 1 cut(s) 591
ErhI CCWWGG 2 cut(s) 387, 503
FaeI CATG 7 cut(s) 475, 890, 896, 1298, 1383, 1718, 1978
FalI AAGNNNNNCTT 8 cut(s) 371, 403, 1431, 1463, 1490, 1522, 1584, 1616
FatI CATG 7 cut(s) 471, 886, 892, 1294, 1379, 1714, 1974
FauNDI CATATG 2 cut(s) 142, 225
FbaI TGATCA 2 cut(s) 153, 889
FblI GTMKAC 2 cut(s) 423, 1138
Fnu4HI GCNGC 1 cut(s) 33
FokI GGATG 9 cut(s) 330, 335, 359, 386, 742, 827, 1064, 1097, 1490
FriOI GRGCYC 1 cut(s) 591
Fsp4HI GCNGC 1 cut(s) 33
FspBI CTAG 5 cut(s) 134, 452, 494, 1733, 1922
GlaI GCGC 4 cut(s) 69, 132, 360, 1313
GluI GCNGC 1 cut(s) 33
GsaI CCCAGC 2 cut(s) 1550, 1714
GsuI CTGGAG 3 cut(s) 57, 867, 1601
HaeII RGCGCY 1 cut(s) 1315
HaeIII GGCC 1 cut(s) 725
HapII CCGG 2 cut(s) 250, 458
HgaI GACGC 1 cut(s) 1478
HhaI GCGC 4 cut(s) 70, 133, 361, 1314
Hin1II CATG 7 cut(s) 475, 890, 896, 1298, 1383, 1718, 1978
Hin6I GCGC 4 cut(s) 68, 131, 359, 1312
HinP1I GCGC 4 cut(s) 68, 131, 359, 1312
HincII GTYRAC 2 cut(s) 424, 1815
HindII GTYRAC 2 cut(s) 424, 1815
HindIII AAGCTT 1 cut(s) 803
HinfI GANTC 9 cut(s) 137, 995, 1100, 1219, 1237, 1376, 1542, 2051, 2073
HpaII CCGG 2 cut(s) 250, 458
HphI GGTGA 3 cut(s) 26, 487, 1174
Hpy166II GTNNAC 5 cut(s) 424, 1139, 1328, 1697, 1815
Hpy8I GTNNAC 5 cut(s) 424, 1139, 1328, 1697, 1815
Hpy99I CGWCG 1 cut(s) 428
HpyAV CCTTC 7 cut(s) 349, 601, 781, 1121, 1403, 1657, 1981
HpyCH4III ACNGT 5 cut(s) 342, 559, 766, 953, 1694
HpyCH4V TGCA 6 cut(s) 1001, 1022, 1214, 1232, 1523, 1891
HpyF10VI GCNNNNNNNGC 2 cut(s) 1621, 1720
HpyF3I CTNAG 5 cut(s) 261, 720, 1151, 1465, 1724
Hsp92II CATG 7 cut(s) 475, 890, 896, 1298, 1383, 1718, 1978
HspAI GCGC 4 cut(s) 68, 131, 359, 1312
Kpn2I TCCGGA 1 cut(s) 249
Ksp22I TGATCA 2 cut(s) 153, 889
LmnI GCTCC 5 cut(s) 586, 847, 1620, 1621, 1871
Lsp1109I GCAGC 1 cut(s) 19
LweI GCATC 6 cut(s) 55, 438, 555, 1201, 1219, 1837
MaeI CTAG 5 cut(s) 134, 452, 494, 1733, 1922
MaeIII GTNAC 4 cut(s) 1162, 1654, 1999, 2033
MflI RGATCY 5 cut(s) 462, 986, 1172, 1729, 1756
MhlI GDGCHC 4 cut(s) 260, 331, 569, 591
MlyI GAGTC 3 cut(s) 131, 1231, 1385
MmeI TCCRAC 3 cut(s) 324, 972, 1327
Mph1103I ATGCAT 1 cut(s) 1216
MroI TCCGGA 1 cut(s) 249
MroXI GAANNNNTTC 2 cut(s) 1290, 1443
MseI TTAA 5 cut(s) 72, 524, 1338, 1386, 1394
MslI CAYNNNNRTG 3 cut(s) 891, 1227, 1340
MspA1I CMGCKG 2 cut(s) 1029, 1550
MspI CCGG 2 cut(s) 250, 458
Mva1269I GAATGC 3 cut(s) 1001, 1022, 1508
MwoI GCNNNNNNNGC 2 cut(s) 1621, 1720
NciI CCSGG 1 cut(s) 459
NdeI CATATG 2 cut(s) 142, 225
NlaIII CATG 7 cut(s) 475, 890, 896, 1298, 1383, 1718, 1978
NlaIV GGNNCC 6 cut(s) 464, 588, 717, 988, 1281, 2014
NmuCI GTSAC 3 cut(s) 1162, 1654, 1999
NsiI ATGCAT 1 cut(s) 1216
NspV TTCGAA 1 cut(s) 395
PagI TCATGA 3 cut(s) 886, 892, 1294
PcsI WCGNNNNNNNCGW 1 cut(s) 429
PctI GAATGC 3 cut(s) 1001, 1022, 1508
PdmI GAANNNNTTC 2 cut(s) 1290, 1443
PfeI GAWTC 6 cut(s) 995, 1100, 1219, 1542, 2051, 2073
PfoI TCCNGGA 3 cut(s) 844, 1080, 1617
PkrI GCNGC 1 cut(s) 34
PleI GAGTC 3 cut(s) 131, 1231, 1384
PpsI GAGTC 3 cut(s) 131, 1231, 1384
PpuMI RGGWCCY 1 cut(s) 1990
PsiI TTATAA 1 cut(s) 1610
Psp5II RGGWCCY 1 cut(s) 1990
PspFI CCCAGC 2 cut(s) 1546, 1710
PspN4I GGNNCC 6 cut(s) 464, 588, 717, 988, 1281, 2014
PspPI GGNCC 3 cut(s) 146, 1513, 1990
PspPPI RGGWCCY 1 cut(s) 1990
PsrI GAACNNNNNNTAC 2 cut(s) 1122, 1154
PstNI CAGNNNCTG 1 cut(s) 845
PsuI RGATCY 5 cut(s) 462, 986, 1172, 1729, 1756
PvuII CAGCTG 2 cut(s) 1029, 1550
RsaI GTAC 9 cut(s) 293, 299, 351, 492, 602, 736, 963, 1443, 1803
RsaNI GTAC 9 cut(s) 292, 298, 350, 491, 601, 735, 962, 1442, 1802
RseI CAYNNNNRTG 3 cut(s) 891, 1227, 1340
SalI GTCGAC 1 cut(s) 422
SaqAI TTAA 5 cut(s) 72, 524, 1338, 1386, 1394
SatI GCNGC 1 cut(s) 33
Sau96I GGNCC 3 cut(s) 146, 1513, 1990
ScaI AGTACT 2 cut(s) 736, 1443
SchI GAGTC 3 cut(s) 131, 1231, 1385
SduI GDGCHC 4 cut(s) 260, 331, 569, 591
SfaNI GCATC 6 cut(s) 55, 438, 555, 1201, 1219, 1837
SfcI CTRYAG 2 cut(s) 1690, 2081
SfuI TTCGAA 1 cut(s) 395
SinI GGWCC 3 cut(s) 146, 1513, 1990
SmiMI CAYNNNNRTG 3 cut(s) 891, 1227, 1340
SmlI CTYRAG 2 cut(s) 809, 1115
SmoI CTYRAG 2 cut(s) 809, 1115
SsiI CCGC 1 cut(s) 1970
SspI AATATT 2 cut(s) 403, 1897
SspMI CTAG 5 cut(s) 134, 452, 494, 1733, 1922
StyI CCWWGG 2 cut(s) 387, 503
TaaI ACNGT 5 cut(s) 342, 559, 766, 953, 1694
TaqI TCGA 4 cut(s) 395, 423, 432, 1103
TatI WGTACW 6 cut(s) 291, 349, 600, 734, 961, 1441
TfiI GAWTC 6 cut(s) 995, 1100, 1219, 1542, 2051, 2073
Tru1I TTAA 5 cut(s) 72, 524, 1338, 1386, 1394
Tru9I TTAA 5 cut(s) 72, 524, 1338, 1386, 1394
TscAI CASTG 4 cut(s) 156, 562, 771, 1699
TseFI GTSAC 3 cut(s) 1162, 1654, 1999
TseI GCWGC 1 cut(s) 32
Tsp45I GTSAC 3 cut(s) 1162, 1654, 1999
TspDTI ATGAA 9 cut(s) 242, 815, 909, 1026, 1113, 1143, 1167, 1283, 1494
TspRI CASTG 4 cut(s) 156, 562, 771, 1699
VpaK11BI GGWCC 3 cut(s) 146, 1513, 1990
XapI RAATTY 4 cut(s) 908, 1040, 1930, 1961
XbaI TCTAGA 1 cut(s) 451
XcmI CCANNNNNNNNNTGG 1 cut(s) 1636
XmiI GTMKAC 2 cut(s) 423, 1138
XmnI GAANNNNTTC 2 cut(s) 1290, 1443
XspI CTAG 5 cut(s) 134, 452, 494, 1733, 1922
ZrmI AGTACT 2 cut(s) 736, 1443
Zsp2I ATGCAT 1 cut(s) 1216
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.