Rh1CG183700

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
Physical Location & Seq
Reverse (-)
40216643 .. 40220186
3544 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG183700.1

Sequence Viewer

Length: 1944 bp
ATGGAAGATCTATATAAACAAAAGGGTTATGAGCCACCAACTCTCCAAGATGGAGTAAATCCAGTGAAATGGTTGAAAAGAGTTCAGAAGGAAAAAGGTTACAATTCTCTATTGTTGGTCTTGGATGATGTTTGGTCTGGATCAGAATCTCTTCTTGAGAAATTTGAATTCAAAATGGCAAATTACAAAATTCTTGTGACATCGAGGTCTGAATTTCGGAGATTTGGTTCTTCATATTATCTGCAACTATTGGATGATGACAATGCAATAAAACTTTTTCATCATACAGCATCCTTGGGAGACAAGAGCTCTCATATTCCAAAAGATCTTTCAAAAATGATAGTAAAGCGTTGTAAGGGCTTTCCCCTGGCCATTACAGTAGCGGGAAAATCACTTTGCGGGCAACCAATAGAAATGTGGCAAAGTAGAATAATTGAATGGTCTAAGGGTTCTTCTATTCTTGATTCTGAGACGGAATTGCTTCTTCGGCTCCAAAGCAGCTTAGATGCCTTAGATAATGAGATGCCTATTGTCAAGAAATGTTTCCTAGACCTATGTGTTTTTCCAGAAGATGCTAATATCCAAGTTGCAACTCTCATTGATATGTGGGCACAGTTGCATGATCTGGATGAAGAGACTTTATGCATCGCCAAACTCTATGAACTTAACAAGCGCAGTCTAGCCAATTTCAAGCATATATGGGGTATAGGGTTGGAAATAGTGGACGAGGATAGAGATTTTAGCGACTACGTTGTTAGGCAGCATGATTTGCTAAGAGAATTGGCTATCTACCACTCGAAACGGGACCCTATAGAACGTAGAGAAAGACTGACTATAGAGATATCTGGAAACAATCTTCCCAAGTGGTGGAGAGTACAAAAGAATCAACCCATCAAGGCTCGCCTAGTATCAATCTCAACTGATGGAGAGTTCTCAATGAAATTGCCCAACATGCAACTACCAGAAGCAGAGGTTCTAGTGTTGAATTTTCAGACGAAATATAACTATGCCTTGCCCCAATTTGTGGAGAAAATGGAAAAGCTCAAGATGCTCGTTCTCATAAACCCTAGCTTTTATAATAACATAGATAATTTTCAACTGCTGGATTCCTTATCAAATCTAAGGAGTATCAGATTTGACGGCATCAATTTTTCTTTCATAACCAAGAGCCCCGTACAGTTGAAGAATCTACACAAGTTATATATGAGAAATGGTACATCTCTTGGCAACGGTCCTGTCAAATTTTCATATGTATTTCCAAATCTGAAGGAATTGGTCATTACTAGTTGCCCAAAGTTCAAGGAATTGCCTGCGGAGCTCTGCGACTTGGTTAATCTGACAAAGCTCGTTATCGTCAATTGCTCTAAGCTTTCTGCCTTGCCTCAAGCGATTGGAAATCTGGTCAATTTACACGTGTTAAGGCTACGGTTCAATCCAGAGCTTCCAGAGGTTCCAGACTCAATTGGAAATCTCAACAAATTAAAATTTCTTGAGATTTCTGCTTGCCATAAACTTGAGAAATTACCTGAACACATAGGTGAGCTGAAGTGTGTGACAAATCTCAGCATCCTGTGGTGCCGTTTGCTATCTGCCTTGCCTGAAGCGATTGGAAATTTGGTCAGTTTAGAAGTATTGCGTCTAAGGTTCTGTAGCAGTTTGTCAGAGTTGCCCGAGTCGATTAGGAATCTCCAAAAGCTAAACTTTCTTGATATCCATAATTGCAGCAAAATCAAGTTGCCTGAACAGATTGGCGAATTGAAGAGTTTAAGAGTGCTGCAAATGAGTCGTTGCAGGGAAGTGAAAAAACTGCCTCAGTCAGTTTCAGATCTTCAGAAGTTAGAAGAAGTGATATGCGATCAGTGGCACATAAATTATTTATGGACACCCTTGTTACCCACTCTCAAAAACCTTCGCACCGTGGTGTGGAAGGGCAATTCCTGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

647

Amino Acids

74.48

Weight (kDa)

8.51

Isoelectric Point (pI)

51.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 421 - 525 7.9e-11 Leucine-rich repeat region
LRR_14 PF23598 529 - 616 7.3e-14 Leucine-rich repeat region
LRR_13 PF23286 539 - 610 5e-06 Disease resistance protein RPS4B-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1077
AasI GACNNNNNNGTC 1 cut(s) 205
AccB1I GGYRCC 1 cut(s) 1575
AccB7I CCANNNNNTGG 2 cut(s) 867, 1024
AciI CCGC 3 cut(s) 383, 399, 1313
AclWI GGATC 1 cut(s) 148
AcoI YGGCCR 1 cut(s) 369
AcsI RAATTY 8 cut(s) 161, 167, 189, 212, 985, 1241, 1484, 1612
AcuI CTGAAG 4 cut(s) 1286, 1565, 1620, 1814
AcvI CACGTG 1 cut(s) 1414
AfaI GTAC 3 cut(s) 876, 1176, 1216
AfiI CCNNNNNNNGG 3 cut(s) 867, 1024, 1923
AflIII ACRYGT 2 cut(s) 1411, 1413
AhlI ACTAGT 1 cut(s) 1283
AjnI CCWGG 1 cut(s) 366
AjuI GAANNNNNNNTTGG 2 cut(s) 313, 345
AleI CACNNNNGTG 2 cut(s) 1536, 1919
AloI GAACNNNNNNTCC 2 cut(s) 211, 243
Alw21I GWGCWC 2 cut(s) 311, 1320
Alw26I GTCTC 3 cut(s) 294, 464, 629
AlwI GGATC 1 cut(s) 148
Ama87I CYCGRG 1 cut(s) 1670
AoxI GGCC 1 cut(s) 369
ApeKI GCWGC 4 cut(s) 498, 760, 1722, 1774
ApoI RAATTY 8 cut(s) 161, 167, 189, 212, 985, 1241, 1484, 1612
Asp700I GAANNNNTTC 3 cut(s) 150, 480, 542
AspLEI GCGC 1 cut(s) 675
AspS9I GGNCC 2 cut(s) 805, 1232
AsuHPI GGTGA 1 cut(s) 1550
AvaI CYCGRG 1 cut(s) 1670
AvaII GGWCC 2 cut(s) 805, 1232
BaeGI GKGCMC 1 cut(s) 613
BalI TGGCCA 1 cut(s) 371
BanI GGYRCC 1 cut(s) 1575
BanII GRGCYC 3 cut(s) 311, 1172, 1320
BbrPI CACGTG 1 cut(s) 1414
Bbv12I GWGCWC 2 cut(s) 311, 1320
BbvI GCAGC 4 cut(s) 510, 772, 1734, 1761
BccI CCATC 3 cut(s) 44, 899, 917
BceAI ACGGC 2 cut(s) 1156, 1563
BcgI CGANNNNNNTGC 2 cut(s) 1766, 1800
BciT130I CCWGG 1 cut(s) 368
BcoDI GTCTC 3 cut(s) 294, 464, 629
BcuI ACTAGT 1 cut(s) 1283
BfaI CTAG 6 cut(s) 548, 680, 905, 977, 1068, 1284
BfmI CTRYAG 3 cut(s) 810, 834, 1648
BglII AGATCT 3 cut(s) 7, 325, 1825
BisI GCNGC 4 cut(s) 499, 761, 1723, 1775
BlsI GCNGC 4 cut(s) 500, 762, 1724, 1776
Bme1390I CCNGG 1 cut(s) 368
Bme18I GGWCC 2 cut(s) 805, 1232
BmeT110I CYCGRG 1 cut(s) 1670
BmgT120I GGNCC 2 cut(s) 805, 1232
BmiI GGNNCC 5 cut(s) 491, 806, 807, 1452, 1577
BmrFI CCNGG 1 cut(s) 368
BmsI GCATC 8 cut(s) 299, 496, 513, 562, 654, 1038, 1152, 1575
BpuEI CTTGAG 5 cut(s) 176, 1028, 1368, 1511, 1535
BsaAI YACGTR 1 cut(s) 1414
BsaBI GATNNNNATC 1 cut(s) 145
BsaJI CCNNGG 3 cut(s) 294, 366, 1917
BsaXI ACNNNNNCTCC 4 cut(s) 27, 57, 211, 241
Bsc4I CCNNNNNNNGG 3 cut(s) 867, 1024, 1923
Bse1I ACTGG 1 cut(s) 62
Bse8I GATNNNNATC 1 cut(s) 145
BseBI CCWGG 1 cut(s) 368
BseDI CCNNGG 3 cut(s) 294, 366, 1917
BseGI GGATG 5 cut(s) 130, 259, 290, 634, 1566
BseJI GATNNNNATC 1 cut(s) 145
BseLI CCNNNNNNNGG 3 cut(s) 867, 1024, 1923
BseMII CTCAG 3 cut(s) 459, 1576, 1826
BseNI ACTGG 1 cut(s) 62
BseSI GKGCMC 1 cut(s) 613
BseXI GCAGC 4 cut(s) 510, 772, 1734, 1761
BshFI GGCC 1 cut(s) 371
BshNI GGYRCC 1 cut(s) 1575
BsiHKAI GWGCWC 2 cut(s) 311, 1320
BsiHKCI CYCGRG 1 cut(s) 1670
BslFI GGGAC 1 cut(s) 818
BslI CCNNNNNNNGG 3 cut(s) 867, 1024, 1923
BsmAI GTCTC 3 cut(s) 294, 464, 629
BsmBI CGTCTC 1 cut(s) 464
BsmFI GGGAC 1 cut(s) 818
BsnI GGCC 1 cut(s) 371
BsoBI CYCGRG 1 cut(s) 1670
Bsp1286I GDGCHC 4 cut(s) 311, 613, 1172, 1320
Bsp143I GATC 6 cut(s) 7, 140, 325, 622, 1825, 1855
BspACI CCGC 3 cut(s) 383, 399, 1313
BspANI GGCC 1 cut(s) 371
BspCNI CTCAG 3 cut(s) 460, 1575, 1825
BspLI GGNNCC 5 cut(s) 491, 806, 807, 1452, 1577
BspPI GGATC 1 cut(s) 148
BspT107I GGYRCC 1 cut(s) 1575
BsrI ACTGG 1 cut(s) 62
BssECI CCNNGG 3 cut(s) 294, 366, 1917
BssMI GATC 6 cut(s) 7, 140, 325, 622, 1825, 1855
BssT1I CCWWGG 1 cut(s) 294
Bst2UI CCWGG 1 cut(s) 368
Bst4CI ACNGT 6 cut(s) 379, 615, 1179, 1232, 1428, 1918
Bst6I CTCTTC 3 cut(s) 156, 627, 1754
BstAPI GCANNNNNTGC 1 cut(s) 769
BstBAI YACGTR 1 cut(s) 1414
BstC8I GCNNGC 4 cut(s) 401, 901, 1311, 1504
BstDSI CCRYGG 1 cut(s) 1917
BstF5I GGATG 5 cut(s) 130, 259, 290, 634, 1566
BstHHI GCGC 1 cut(s) 675
BstKTI GATC 6 cut(s) 10, 143, 328, 625, 1828, 1858
BstMAI GTCTC 3 cut(s) 294, 464, 629
BstMBI GATC 6 cut(s) 7, 140, 325, 622, 1825, 1855
BstMWI GCNNNNNNNGC 5 cut(s) 487, 769, 952, 1048, 1315
BstNI CCWGG 1 cut(s) 368
BstNSI RCATGY 1 cut(s) 955
BstSCI CCNGG 1 cut(s) 366
BstSFI CTRYAG 3 cut(s) 810, 834, 1648
BstSLI GKGCMC 1 cut(s) 613
BstV1I GCAGC 4 cut(s) 510, 772, 1734, 1761
BstX2I RGATCY 3 cut(s) 7, 325, 1825
BstXI CCANNNNNNTGG 1 cut(s) 69
BstYI RGATCY 3 cut(s) 7, 325, 1825
BsuRI GGCC 1 cut(s) 371
BtgI CCRYGG 1 cut(s) 1917
BtgZI GCGATG 1 cut(s) 631
BtsCI GGATG 5 cut(s) 130, 259, 290, 634, 1566
BtsIMutI CAGTG 2 cut(s) 69, 1865
Cac8I GCNNGC 4 cut(s) 401, 901, 1311, 1504
CfoI GCGC 1 cut(s) 675
Cfr13I GGNCC 2 cut(s) 805, 1232
CseI GACGC 1 cut(s) 1625
Csp6I GTAC 3 cut(s) 875, 1175, 1215
CviAII CATG 3 cut(s) 620, 764, 952
CviQI GTAC 3 cut(s) 875, 1175, 1215
DpnI GATC 6 cut(s) 9, 142, 327, 624, 1827, 1857
DpnII GATC 6 cut(s) 7, 140, 325, 622, 1825, 1855
DrdI GACNNNNNNGTC 1 cut(s) 205
DseDI GACNNNNNNGTC 1 cut(s) 205
EaeI YGGCCR 1 cut(s) 369
Eam1104I CTCTTC 3 cut(s) 156, 627, 1754
EarI CTCTTC 3 cut(s) 156, 627, 1754
Ecl136II GAGCTC 2 cut(s) 309, 1318
Eco130I CCWWGG 1 cut(s) 294
Eco24I GRGCYC 3 cut(s) 311, 1172, 1320
Eco32I GATATC 2 cut(s) 843, 1711
Eco47I GGWCC 2 cut(s) 805, 1232
Eco53kI GAGCTC 2 cut(s) 309, 1318
Eco57I CTGAAG 4 cut(s) 1286, 1565, 1620, 1814
Eco72I CACGTG 1 cut(s) 1414
Eco88I CYCGRG 1 cut(s) 1670
EcoICRI GAGCTC 2 cut(s) 309, 1318
EcoO109I RGGNCCY 1 cut(s) 805
EcoRI GAATTC 1 cut(s) 167
EcoRII CCWGG 1 cut(s) 366
EcoRV GATATC 2 cut(s) 843, 1711
EcoT14I CCWWGG 1 cut(s) 294
EcoT22I ATGCAT 1 cut(s) 647
EcoT38I GRGCYC 3 cut(s) 311, 1172, 1320
ErhI CCWWGG 1 cut(s) 294
Esp3I CGTCTC 1 cut(s) 464
FaeI CATG 3 cut(s) 623, 767, 955
FalI AAGNNNNNCTT 2 cut(s) 1685, 1717
FaqI GGGAC 1 cut(s) 818
FatI CATG 3 cut(s) 619, 763, 951
FauI CCCGC 2 cut(s) 376, 392
FauNDI CATATG 1 cut(s) 1249
Fnu4HI GCNGC 4 cut(s) 499, 761, 1723, 1775
FokI GGATG 5 cut(s) 137, 266, 277, 641, 1553
FriOI GRGCYC 3 cut(s) 311, 1172, 1320
Fsp4HI GCNGC 4 cut(s) 499, 761, 1723, 1775
FspBI CTAG 6 cut(s) 548, 680, 905, 977, 1068, 1284
GlaI GCGC 1 cut(s) 674
GluI GCNGC 4 cut(s) 499, 761, 1723, 1775
HaeIII GGCC 1 cut(s) 371
HgaI GACGC 1 cut(s) 1625
HhaI GCGC 1 cut(s) 675
Hin1II CATG 3 cut(s) 623, 767, 955
Hin6I GCGC 1 cut(s) 673
HinP1I GCGC 1 cut(s) 673
HindIII AAGCTT 1 cut(s) 1367
HinfI GANTC 9 cut(s) 146, 464, 883, 1106, 1186, 1457, 1673, 1684, 1783
HphI GGTGA 1 cut(s) 1550
Hpy166II GTNNAC 1 cut(s) 724
Hpy8I GTNNAC 1 cut(s) 724
HpyAV CCTTC 4 cut(s) 82, 1261, 1919, 1921
HpyCH4III ACNGT 6 cut(s) 379, 615, 1179, 1232, 1428, 1918
HpyCH4IV ACGT 3 cut(s) 750, 817, 1413
HpyCH4V TGCA 9 cut(s) 244, 266, 590, 619, 645, 955, 1722, 1777, 1791
HpyF10VI GCNNNNNNNGC 5 cut(s) 487, 769, 952, 1048, 1315
HpySE526I ACGT 3 cut(s) 750, 817, 1413
Hsp92II CATG 3 cut(s) 623, 767, 955
HspAI GCGC 1 cut(s) 673
KflI GGGWCCC 1 cut(s) 805
Kzo9I GATC 6 cut(s) 7, 140, 325, 622, 1825, 1855
LmnI GCTCC 2 cut(s) 495, 1315
Lsp1109I GCAGC 4 cut(s) 510, 772, 1734, 1761
LweI GCATC 8 cut(s) 299, 496, 513, 562, 654, 1038, 1152, 1575
MaeI CTAG 6 cut(s) 548, 680, 905, 977, 1068, 1284
MaeII ACGT 3 cut(s) 750, 817, 1413
MaeIII GTNAC 4 cut(s) 98, 196, 1552, 1890
MalI GATC 6 cut(s) 9, 142, 327, 624, 1827, 1857
MboI GATC 6 cut(s) 7, 140, 325, 622, 1825, 1855
MfeI CAATTG 2 cut(s) 1357, 1461
MflI RGATCY 3 cut(s) 7, 325, 1825
MhlI GDGCHC 4 cut(s) 311, 613, 1172, 1320
MlsI TGGCCA 1 cut(s) 371
MluNI TGGCCA 1 cut(s) 371
MlyI GAGTC 3 cut(s) 1451, 1682, 1792
MmeI TCCRAC 1 cut(s) 693
MnlI CCTC 6 cut(s) 198, 721, 964, 1392, 1441, 1821
Mox20I TGGCCA 1 cut(s) 371
Mph1103I ATGCAT 1 cut(s) 647
MroXI GAANNNNTTC 3 cut(s) 150, 480, 542
MscI TGGCCA 1 cut(s) 371
MseI TTAA 6 cut(s) 666, 1332, 1418, 1481, 1766, 1942
MslI CAYNNNNRTG 3 cut(s) 602, 1536, 1919
Msp20I TGGCCA 1 cut(s) 371
MspR9I CCNGG 1 cut(s) 368
MunI CAATTG 2 cut(s) 1357, 1461
MvaI CCWGG 1 cut(s) 368
MwoI GCNNNNNNNGC 5 cut(s) 487, 769, 952, 1048, 1315
NdeI CATATG 1 cut(s) 1249
NdeII GATC 6 cut(s) 7, 140, 325, 622, 1825, 1855
NlaIII CATG 3 cut(s) 623, 767, 955
NlaIV GGNNCC 5 cut(s) 491, 806, 807, 1452, 1577
NmuCI GTSAC 2 cut(s) 196, 1552
NsiI ATGCAT 1 cut(s) 647
NspI RCATGY 1 cut(s) 955
OliI CACNNNNGTG 2 cut(s) 1536, 1919
PdmI GAANNNNTTC 3 cut(s) 150, 480, 542
PfeI GAWTC 6 cut(s) 146, 464, 883, 1106, 1186, 1684
PflMI CCANNNNNTGG 2 cut(s) 867, 1024
PkrI GCNGC 4 cut(s) 500, 762, 1724, 1776
PleI GAGTC 3 cut(s) 1451, 1681, 1791
PmaCI CACGTG 1 cut(s) 1414
PmlI CACGTG 1 cut(s) 1414
PpsI GAGTC 3 cut(s) 1451, 1681, 1791
Ppu21I YACGTR 1 cut(s) 1414
PpuMI RGGWCCY 1 cut(s) 805
PsiI TTATAA 1 cut(s) 1077
Psp124BI GAGCTC 2 cut(s) 311, 1320
Psp5II RGGWCCY 1 cut(s) 805
Psp6I CCWGG 1 cut(s) 366
PspCI CACGTG 1 cut(s) 1414
PspGI CCWGG 1 cut(s) 366
PspN4I GGNNCC 5 cut(s) 491, 806, 807, 1452, 1577
PspPI GGNCC 2 cut(s) 805, 1232
PspPPI RGGWCCY 1 cut(s) 805
PsuI RGATCY 3 cut(s) 7, 325, 1825
RsaI GTAC 3 cut(s) 876, 1176, 1216
RsaNI GTAC 3 cut(s) 875, 1175, 1215
RseI CAYNNNNRTG 3 cut(s) 602, 1536, 1919
SacI GAGCTC 2 cut(s) 311, 1320
SaqAI TTAA 6 cut(s) 666, 1332, 1418, 1481, 1766, 1942
SatI GCNGC 4 cut(s) 499, 761, 1723, 1775
Sau3AI GATC 6 cut(s) 7, 140, 325, 622, 1825, 1855
Sau96I GGNCC 2 cut(s) 805, 1232
SchI GAGTC 3 cut(s) 1451, 1682, 1792
ScrFI CCNGG 1 cut(s) 368
SduI GDGCHC 4 cut(s) 311, 613, 1172, 1320
SfaNI GCATC 8 cut(s) 299, 496, 513, 562, 654, 1038, 1152, 1575
SfcI CTRYAG 3 cut(s) 810, 834, 1648
SinI GGWCC 2 cut(s) 805, 1232
SmiMI CAYNNNNRTG 3 cut(s) 602, 1536, 1919
SmlI CTYRAG 5 cut(s) 155, 1043, 1383, 1490, 1514
SmoI CTYRAG 5 cut(s) 155, 1043, 1383, 1490, 1514
SpeI ACTAGT 1 cut(s) 1283
SsiI CCGC 3 cut(s) 383, 399, 1313
SspMI CTAG 6 cut(s) 548, 680, 905, 977, 1068, 1284
SstI GAGCTC 2 cut(s) 311, 1320
StyD4I CCNGG 1 cut(s) 366
StyI CCWWGG 1 cut(s) 294
TaaI ACNGT 6 cut(s) 379, 615, 1179, 1232, 1428, 1918
TaiI ACGT 3 cut(s) 753, 820, 1416
TaqI TCGA 3 cut(s) 203, 797, 1676
TatI WGTACW 1 cut(s) 874
TfiI GAWTC 6 cut(s) 146, 464, 883, 1106, 1186, 1684
Tru1I TTAA 6 cut(s) 666, 1332, 1418, 1481, 1766, 1942
Tru9I TTAA 6 cut(s) 666, 1332, 1418, 1481, 1766, 1942
TscAI CASTG 2 cut(s) 69, 1865
TseFI GTSAC 2 cut(s) 196, 1552
TseI GCWGC 4 cut(s) 498, 760, 1722, 1774
Tsp45I GTSAC 2 cut(s) 196, 1552
TspDTI ATGAA 7 cut(s) 222, 269, 645, 675, 953, 1147, 1236
TspGWI ACGGA 1 cut(s) 488
TspRI CASTG 2 cut(s) 69, 1865
Van91I CCANNNNNTGG 2 cut(s) 867, 1024
VpaK11BI GGWCC 2 cut(s) 805, 1232
XapI RAATTY 8 cut(s) 161, 167, 189, 212, 985, 1241, 1484, 1612
XceI RCATGY 1 cut(s) 955
XcmI CCANNNNNNNNNTGG 1 cut(s) 414
XmnI GAANNNNTTC 3 cut(s) 150, 480, 542
XspI CTAG 6 cut(s) 548, 680, 905, 977, 1068, 1284
Zsp2I ATGCAT 1 cut(s) 647
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.