Prupe.7G139600_v2.0.a1

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0000039
Physical Location & Seq
Reverse (-)
15550960 .. 15554619
3660 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G139600.1

Sequence Viewer

Length: 2463 bp
ATGGGAGGACCAGATTTTGGAGGGGCTGGTCTAGGAGCACTGTTTAATGTGTTGTATGATGGCCTCAAGGAGCTGATCGGCAAGAATGTCATATATAAAACCCTCCTCAAAGCCATCATATCGAGGTTAGACATTTTACACCCATTGATCAAAGAAATAGCAAAATACAACAAGGATTTGGATCTCCCAGATAAGGAACTAGAAAATCTGAAAGTAGGGATGGAGAAGGGCATAGAGCTGGTCCACAAGTGCTCAAAGATTCGTGCTTGGAACATCTATAAAAAGTACAAATATGCCAACAAACTTCTTGATTGGAACGAATCTCTTCTAGGGCTTTTAGATATGCTGAATGTGCAGGGCATAAGGGATGTGAAGGGGAGCTCGGTTTCGGTGAGGAACATAGAGAAGGTGGTCAGCCGAATTGAATCAAGTTTGGTGTTACAATATCAAGATGAGACTGAAGTTTGGGGTGCAGCACCTGAACTTCCGGCGCTTGTAGTTGGGTTGGATTTTCCTTTGAAGGAGTTGAAGAGGAAGCTTCTTAATTTTAAAGATGGGGTGTCGATGCTTGTTCTGACCGCTCCTGGAGGATGTGGCAAGACCACTTTGGCAACAGCATTTTGTCAAGATCAGGAAGTCAAAGATACATTTGGGGACAATATCTTCTTTGTCACTGTTTCAAGCAACCCCAACTTGGAACGTATTGTTCAAGAACTTCATCTACGCAGGGGTTCTAAAGTACCTACTCTCGGAAACGAAATAAATGCAGTTAAGTGGCTGCACCATTTTCTCAAGGAAGAAGGACAAAATCCTTTACTGTTGGTCCTGGATGATGTTTGGTCTGGATCAGAATCCCTTCTGGAGAAGTTTGATCAATTTAAAATGCCAAACTACAAGCTTTTGGTGACATCAAGGTCTGAGTTTCGGGGATTTGGCTCTCCATATTCTTTACAGTCATTGGATTATCACAATGCAATGAAACTTTTTCATCATTCAGCATCCTTGGGAGATAAGAGCTCTCTTATTCCCCAAGATCTTTCAAGACAGATGGTAGAGCGTTGTAAGGGATTTCCACTTGCCATTAAAGTGCTTGGGAGATCACTTTGCGGGCAGCCTATAGAGATCTGGAAAAAGAGAGTAATTGAATGGACTAGAGGTTCTACTGTTCATGATTCAGAGGCTGAATTGCTTCTTTGTCTCCAAAGCAGCTTAGAAGCATTGGATAAAGAAATGGCTATCATAAAGGAATGTTTCTTAGACCTGGGTTCATTTCCTGAAGACCAAAGAATCCCTGCTGCTGCCCTCATTGATATATGGGAAGAGTTATATGATCTAGATGAAGACACAGAGTGCATTGCAAACCTCTACGAGCTCACCAAGCGAAGTCTCGCTAATGTTGTAGTCACAAGGAAGGAAAATATGGAGGGGGATGAGTACTACAATGAACACTTTGTTACCCAACATGATATTCTTAGAGAGCTAGCCATCTACTACTCAAAACTAGAACCAGCAGAACAGAGAACAAGACTGATTATAGACATGCGAGGAAACAAACTTCCCAAGTGGTGGAGAGAACAGAAGCATCCATTGATGAAGGCTCGCCTGTTATCTATCTCAACCGACGGTGTATTTTCAGGAAAATGGCACAACATGCAAGTACCAGAAGTTGAGGTTCTAGTCTTGAATTTCCAGACAGAGAACTATGCCTTACCCGAATCTGTGGAGAACATGGATAAATTGAAGGCTTTAATAGTCACAAATTATGGTTTCTTACCAGCTGAGTTAAGTAACTTTCAACTTCTGAGCTCGTTATCAAATTTGAAGAGAATCAGATTAGAACGCATCTCAATTCTTTCCATAACCAAGAACCCCATAGAATTGAAGAGTCTGCAGAAGATATCCTTGTTCATGTGCAATATCGGTCAAGCTTTCAGCAACTGCTCCATCCCAATCTCATCAGCATTCCCGAATATAGAGGAAATGAACATTGACTATTGCCATGATTTGGTGGAATTGCCTGCCGAGCTCTGTGGTCTTAGTCAACTAAAGAAGCTCAGTGTCACCAATTGTCATAAGCTATCTGCCTTGCCTGAAGAGATTGGAAAGTTGACCAAGTTAGAAGTGTTGAGGCTAAAATCCTGTACAGACCTAGTAAAACTTCCAGGCTCGATGAAGAGCCTCAAAAAGTTAGACTTTCTTGACATATCTGATTGCTTCAGCATTAGGGAGTTGCCTGAAGACATTGGTGACATAAGCAATTTAAGAAAGATCAACATGAGACAGTGCTTAAGGTTGGAAGAGCTACCTCTATCTGTTTTGGATCTTGAGCAGTTAAAGGAAGTGATCTGTGATGAAGAGACAAAATATTTATGGGAATCTTTCTCATCTCACCTGAACAACGTAAGCATAAATGTGGCCAAAGAAAATATCAATCTTAATTGGCTCCACCACACTCAAATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
NB-ARC RPW8

Protein Analysis

821

Amino Acids

93.32

Weight (kDa)

5.83

Isoelectric Point (pI)

44.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 913
AccB7I CCANNNNNTGG 3 cut(s) 17, 1566, 2005
AccBSI CCGCTC 1 cut(s) 581
AciI CCGC 2 cut(s) 579, 1107
AclWI GGATC 3 cut(s) 189, 853, 2328
AcoI YGGCCR 1 cut(s) 2415
AcsI RAATTY 2 cut(s) 1684, 1816
AcuI CTGAAG 5 cut(s) 480, 1296, 2112, 2200, 2256
AdeI CACNNNGTG 1 cut(s) 1350
AfaI GTAC 5 cut(s) 287, 741, 1436, 1659, 2143
AfiI CCNNNNNNNGG 6 cut(s) 17, 193, 694, 749, 1566, 2005
AflII CTTAAG 1 cut(s) 2287
AjnI CCWGG 4 cut(s) 583, 825, 1260, 2161
AjuI GAANNNNNNNTTGG 2 cut(s) 1452, 1484
AloI GAACNNNNNNTCC 2 cut(s) 1141, 1173
Alw21I GWGCWC 7 cut(s) 40, 254, 383, 1019, 1374, 1808, 2028
Alw26I GTCTC 5 cut(s) 449, 1202, 1391, 2272, 2351
AlwI GGATC 3 cut(s) 189, 853, 2328
AlwNI CAGNNNCTG 3 cut(s) 479, 1181, 1938
AoxI GGCC 2 cut(s) 61, 2415
ApeKI GCWGC 6 cut(s) 473, 778, 1111, 1206, 1295, 1298
ApoI RAATTY 2 cut(s) 1684, 1816
Asp700I GAANNNNTTC 3 cut(s) 324, 855, 1188
AspLEI GCGC 1 cut(s) 493
AspS9I GGNCC 3 cut(s) 8, 241, 823
AsuHPI GGTGA 6 cut(s) 403, 916, 1366, 2053, 2258, 2381
AsuNHI GCTAGC 1 cut(s) 1480
AvaII GGWCC 3 cut(s) 8, 241, 823
BalI TGGCCA 1 cut(s) 2417
BanII GRGCYC 5 cut(s) 383, 1019, 1374, 1808, 2028
BbsI GAAGAC 3 cut(s) 1284, 1347, 2244
Bbv12I GWGCWC 7 cut(s) 40, 254, 383, 1019, 1374, 1808, 2028
BbvI GCAGC 6 cut(s) 485, 765, 1123, 1218, 1282, 1285
BccI CCATC 7 cut(s) 53, 122, 214, 548, 1042, 1493, 1952
BcgI CGANNNNNNTGC 2 cut(s) 746, 780
BciT130I CCWGG 4 cut(s) 585, 827, 1262, 2163
BclI TGATCA 2 cut(s) 147, 871
BcoDI GTCTC 5 cut(s) 449, 1202, 1391, 2272, 2351
BfaI CTAG 9 cut(s) 32, 200, 329, 1152, 1334, 1481, 1502, 1676, 2150
BfmI CTRYAG 2 cut(s) 1116, 1889
BfoI RGCGCY 1 cut(s) 494
BfrI CTTAAG 1 cut(s) 2287
BglII AGATCT 2 cut(s) 1033, 1122
BisI GCNGC 6 cut(s) 474, 779, 1112, 1207, 1296, 1299
BlsI GCNGC 6 cut(s) 475, 780, 1113, 1208, 1297, 1300
BmcAI AGTACT 1 cut(s) 1436
Bme1390I CCNGG 4 cut(s) 585, 827, 1262, 2163
Bme18I GGWCC 3 cut(s) 8, 241, 823
BmgT120I GGNCC 3 cut(s) 8, 241, 823
BmiI GGNNCC 1 cut(s) 2444
BmrFI CCNGG 4 cut(s) 585, 827, 1262, 2163
BmsI GCATC 4 cut(s) 555, 1007, 1591, 1851
BmtI GCTAGC 1 cut(s) 1484
BpiI GAAGAC 3 cut(s) 1284, 1347, 2244
BpmI CTGGAG 2 cut(s) 606, 881
BpuEI CTTGAG 3 cut(s) 50, 776, 2345
BsaBI GATNNNNATC 2 cut(s) 180, 850
BsaJI CCNNGG 2 cut(s) 1002, 1261
Bsc4I CCNNNNNNNGG 6 cut(s) 17, 193, 694, 749, 1566, 2005
Bse3DI GCAATG 2 cut(s) 981, 1353
Bse8I GATNNNNATC 2 cut(s) 180, 850
BseBI CCWGG 4 cut(s) 585, 827, 1262, 2163
BseDI CCNNGG 2 cut(s) 1002, 1261
BseGI GGATG 8 cut(s) 225, 373, 596, 835, 998, 1435, 1582, 1944
BseJI GATNNNNATC 2 cut(s) 180, 850
BseLI CCNNNNNNNGG 6 cut(s) 17, 193, 694, 749, 1566, 2005
BseMI GCAATG 2 cut(s) 981, 1353
BseMII CTCAG 4 cut(s) 909, 1770, 1793, 2068
BseRI GAGGAG 1 cut(s) 95
BseXI GCAGC 6 cut(s) 485, 765, 1123, 1218, 1282, 1285
BsgI GTGCAG 3 cut(s) 374, 492, 764
BshFI GGCC 2 cut(s) 63, 2417
BsiHKAI GWGCWC 7 cut(s) 40, 254, 383, 1019, 1374, 1808, 2028
BsiSI CCGG 1 cut(s) 488
BslFI GGGAC 1 cut(s) 668
BslI CCNNNNNNNGG 6 cut(s) 17, 193, 694, 749, 1566, 2005
BsmAI GTCTC 5 cut(s) 449, 1202, 1391, 2272, 2351
BsmFI GGGAC 1 cut(s) 668
BsmI GAATGC 1 cut(s) 1961
BsnI GGCC 2 cut(s) 63, 2417
Bsp1286I GDGCHC 7 cut(s) 40, 254, 383, 1019, 1374, 1808, 2028
Bsp1407I TGTACA 1 cut(s) 2141
BspACI CCGC 2 cut(s) 579, 1107
BspANI GGCC 2 cut(s) 63, 2417
BspCNI CTCAG 4 cut(s) 910, 1771, 1794, 2067
BspHI TCATGA 1 cut(s) 1168
BspLI GGNNCC 1 cut(s) 2444
BspMAI CTGCAG 1 cut(s) 1893
BspOI GCTAGC 1 cut(s) 1484
BspPI GGATC 3 cut(s) 189, 853, 2328
BspQI GCTCTTC 2 cut(s) 2168, 2292
BspTI CTTAAG 1 cut(s) 2287
BsrBI CCGCTC 1 cut(s) 581
BsrDI GCAATG 2 cut(s) 981, 1353
BsrGI TGTACA 1 cut(s) 2141
BssECI CCNNGG 2 cut(s) 1002, 1261
BssT1I CCWWGG 1 cut(s) 1002
Bst2UI CCWGG 4 cut(s) 585, 827, 1262, 2163
Bst4CI ACNGT 7 cut(s) 42, 676, 819, 954, 1165, 1625, 2283
Bst6I CTCTTC 9 cut(s) 330, 524, 1314, 1817, 1877, 2088, 2168, 2292, 2349
BstAFI CTTAAG 1 cut(s) 2287
BstAPI GCANNNNNTGC 1 cut(s) 1651
BstAUI TGTACA 1 cut(s) 2141
BstC8I GCNNGC 4 cut(s) 1109, 1482, 1600, 2019
BstDEI CTNAG 8 cut(s) 918, 1210, 1255, 1472, 1779, 1802, 2036, 2054
BstF5I GGATG 8 cut(s) 225, 373, 596, 835, 998, 1435, 1582, 1944
BstH2I RGCGCY 1 cut(s) 494
BstHHI GCGC 1 cut(s) 493
BstMAI GTCTC 5 cut(s) 449, 1202, 1391, 2272, 2351
BstMWI GCNNNNNNNGC 4 cut(s) 352, 1378, 1651, 2023
BstNI CCWGG 4 cut(s) 585, 827, 1262, 2163
BstNSI RCATGY 2 cut(s) 1543, 1654
BstSCI CCNGG 4 cut(s) 583, 825, 1260, 2161
BstSFI CTRYAG 2 cut(s) 1116, 1889
BstV1I GCAGC 6 cut(s) 485, 765, 1123, 1218, 1282, 1285
BstV2I GAAGAC 3 cut(s) 1284, 1347, 2244
BstX2I RGATCY 4 cut(s) 181, 1033, 1122, 2320
BstYI RGATCY 4 cut(s) 181, 1033, 1122, 2320
BsuRI GGCC 2 cut(s) 63, 2417
BtsCI GGATG 8 cut(s) 225, 373, 596, 835, 998, 1435, 1582, 1944
BtsIMutI CAGTG 4 cut(s) 38, 672, 2062, 2288
Cac8I GCNNGC 4 cut(s) 1109, 1482, 1600, 2019
CaiI CAGNNNCTG 3 cut(s) 479, 1181, 1938
CciI TCATGA 1 cut(s) 1168
CfoI GCGC 1 cut(s) 493
Cfr13I GGNCC 3 cut(s) 8, 241, 823
Csp6I GTAC 5 cut(s) 286, 740, 1435, 1658, 2142
CviAII CATG 8 cut(s) 1169, 1463, 1540, 1651, 1729, 1909, 2000, 2275
CviQI GTAC 5 cut(s) 286, 740, 1435, 1658, 2142
DdeI CTNAG 8 cut(s) 918, 1210, 1255, 1472, 1779, 1802, 2036, 2054
DraI TTTAAA 2 cut(s) 550, 880
DraIII CACNNNGTG 1 cut(s) 1350
DrdI GACNNNNNNGTC 1 cut(s) 913
DseDI GACNNNNNNGTC 1 cut(s) 913
EaeI YGGCCR 1 cut(s) 2415
Eam1104I CTCTTC 9 cut(s) 330, 524, 1314, 1817, 1877, 2088, 2168, 2292, 2349
EarI CTCTTC 9 cut(s) 330, 524, 1314, 1817, 1877, 2088, 2168, 2292, 2349
Ecl136II GAGCTC 5 cut(s) 381, 1017, 1372, 1806, 2026
Eco130I CCWWGG 1 cut(s) 1002
Eco24I GRGCYC 5 cut(s) 383, 1019, 1374, 1808, 2028
Eco32I GATATC 1 cut(s) 1899
Eco47I GGWCC 3 cut(s) 8, 241, 823
Eco53kI GAGCTC 5 cut(s) 381, 1017, 1372, 1806, 2026
Eco57I CTGAAG 5 cut(s) 480, 1296, 2112, 2200, 2256
EcoICRI GAGCTC 5 cut(s) 381, 1017, 1372, 1806, 2026
EcoRII CCWGG 4 cut(s) 583, 825, 1260, 2161
EcoRV GATATC 1 cut(s) 1899
EcoT14I CCWWGG 1 cut(s) 1002
EcoT38I GRGCYC 5 cut(s) 383, 1019, 1374, 1808, 2028
ErhI CCWWGG 1 cut(s) 1002
FaeI CATG 8 cut(s) 1172, 1466, 1543, 1654, 1732, 1912, 2003, 2278
FalI AAGNNNNNCTT 4 cut(s) 1886, 1918, 2177, 2209
FaqI GGGAC 1 cut(s) 668
FatI CATG 8 cut(s) 1168, 1462, 1539, 1650, 1728, 1908, 1999, 2274
FauI CCCGC 1 cut(s) 1100
FbaI TGATCA 2 cut(s) 147, 871
Fnu4HI GCNGC 6 cut(s) 474, 779, 1112, 1207, 1296, 1299
FokI GGATG 8 cut(s) 232, 380, 603, 842, 985, 1442, 1569, 1931
FriOI GRGCYC 5 cut(s) 383, 1019, 1374, 1808, 2028
Fsp4HI GCNGC 6 cut(s) 474, 779, 1112, 1207, 1296, 1299
FspBI CTAG 9 cut(s) 32, 200, 329, 1152, 1334, 1481, 1502, 1676, 2150
GlaI GCGC 1 cut(s) 492
GluI GCNGC 6 cut(s) 474, 779, 1112, 1207, 1296, 1299
GsuI CTGGAG 2 cut(s) 606, 881
HaeII RGCGCY 1 cut(s) 494
HaeIII GGCC 2 cut(s) 63, 2417
HapII CCGG 1 cut(s) 488
HhaI GCGC 1 cut(s) 493
Hin1II CATG 8 cut(s) 1172, 1466, 1543, 1654, 1732, 1912, 2003, 2278
Hin6I GCGC 1 cut(s) 491
HinP1I GCGC 1 cut(s) 491
HincII GTYRAC 2 cut(s) 2042, 2109
HindII GTYRAC 2 cut(s) 2042, 2109
HindIII AAGCTT 3 cut(s) 536, 896, 1926
HpaII CCGG 1 cut(s) 488
HphI GGTGA 6 cut(s) 403, 916, 1366, 2053, 2258, 2381
Hpy166II GTNNAC 3 cut(s) 244, 2042, 2109
Hpy8I GTNNAC 3 cut(s) 244, 2042, 2109
Hpy99I CGWCG 1 cut(s) 1625
HpyAV CCTTC 9 cut(s) 220, 367, 400, 514, 794, 866, 1405, 1588, 1735
HpyCH4III ACNGT 7 cut(s) 42, 676, 819, 954, 1165, 1625, 2283
HpyCH4IV ACGT 2 cut(s) 700, 2400
HpyF10VI GCNNNNNNNGC 4 cut(s) 352, 1378, 1651, 2023
HpyF3I CTNAG 8 cut(s) 918, 1210, 1255, 1472, 1779, 1802, 2036, 2054
HpySE526I ACGT 2 cut(s) 700, 2400
Hsp92II CATG 8 cut(s) 1172, 1466, 1543, 1654, 1732, 1912, 2003, 2278
HspAI GCGC 1 cut(s) 491
Ksp22I TGATCA 2 cut(s) 147, 871
LguI GCTCTTC 2 cut(s) 2168, 2292
LmnI GCTCC 6 cut(s) 35, 70, 378, 586, 1946, 2448
Lsp1109I GCAGC 6 cut(s) 485, 765, 1123, 1218, 1282, 1285
LweI GCATC 4 cut(s) 555, 1007, 1591, 1851
MaeI CTAG 9 cut(s) 32, 200, 329, 1152, 1334, 1481, 1502, 1676, 2150
MaeII ACGT 2 cut(s) 700, 2400
MaeIII GTNAC 9 cut(s) 438, 670, 904, 1402, 1453, 1753, 1787, 2059, 2246
MbiI CCGCTC 1 cut(s) 581
MfeI CAATTG 1 cut(s) 2065
MflI RGATCY 4 cut(s) 181, 1033, 1122, 2320
MhlI GDGCHC 7 cut(s) 40, 254, 383, 1019, 1374, 1808, 2028
MlsI TGGCCA 1 cut(s) 2417
MluNI TGGCCA 1 cut(s) 2417
MlyI GAGTC 1 cut(s) 1894
MmeI TCCRAC 2 cut(s) 486, 2274
Mox20I TGGCCA 1 cut(s) 2417
MroXI GAANNNNTTC 3 cut(s) 324, 855, 1188
MscI TGGCCA 1 cut(s) 2417
MslI CAYNNNNRTG 2 cut(s) 1085, 2411
Msp20I TGGCCA 1 cut(s) 2417
MspA1I CMGCKG 1 cut(s) 1778
MspCI CTTAAG 1 cut(s) 2287
MspI CCGG 1 cut(s) 488
MspR9I CCNGG 4 cut(s) 585, 827, 1262, 2163
MunI CAATTG 1 cut(s) 2065
Mva1269I GAATGC 1 cut(s) 1961
MvaI CCWGG 4 cut(s) 585, 827, 1262, 2163
MwoI GCNNNNNNNGC 4 cut(s) 352, 1378, 1651, 2023
NheI GCTAGC 1 cut(s) 1480
NlaIII CATG 8 cut(s) 1172, 1466, 1543, 1654, 1732, 1912, 2003, 2278
NlaIV GGNNCC 1 cut(s) 2444
NmeAIII GCCGAG 1 cut(s) 2047
NmuCI GTSAC 6 cut(s) 670, 904, 1402, 1753, 2059, 2246
NspI RCATGY 2 cut(s) 1543, 1654
PagI TCATGA 1 cut(s) 1168
PciSI GCTCTTC 2 cut(s) 2168, 2292
PctI GAATGC 1 cut(s) 1961
PdmI GAANNNNTTC 3 cut(s) 324, 855, 1188
PfeI GAWTC 9 cut(s) 259, 320, 425, 851, 1172, 1287, 1715, 1827, 2375
PflMI CCANNNNNTGG 3 cut(s) 17, 1566, 2005
PfoI TCCNGGA 2 cut(s) 583, 825
PkrI GCNGC 6 cut(s) 475, 780, 1113, 1208, 1297, 1300
PleI GAGTC 1 cut(s) 1893
PpsI GAGTC 1 cut(s) 1893
Psp124BI GAGCTC 5 cut(s) 383, 1019, 1374, 1808, 2028
Psp6I CCWGG 4 cut(s) 583, 825, 1260, 2161
PspGI CCWGG 4 cut(s) 583, 825, 1260, 2161
PspN4I GGNNCC 1 cut(s) 2444
PspPI GGNCC 3 cut(s) 8, 241, 823
PsrI GAACNNNNNNTAC 2 cut(s) 705, 737
PstI CTGCAG 1 cut(s) 1893
PstNI CAGNNNCTG 3 cut(s) 479, 1181, 1938
PsuI RGATCY 4 cut(s) 181, 1033, 1122, 2320
PvuII CAGCTG 1 cut(s) 1778
RsaI GTAC 5 cut(s) 287, 741, 1436, 1659, 2143
RsaNI GTAC 5 cut(s) 286, 740, 1435, 1658, 2142
RseI CAYNNNNRTG 2 cut(s) 1085, 2411
SacI GAGCTC 5 cut(s) 383, 1019, 1374, 1808, 2028
SapI GCTCTTC 2 cut(s) 2168, 2292
SatI GCNGC 6 cut(s) 474, 779, 1112, 1207, 1296, 1299
Sau96I GGNCC 3 cut(s) 8, 241, 823
ScaI AGTACT 1 cut(s) 1436
SchI GAGTC 1 cut(s) 1894
ScrFI CCNGG 4 cut(s) 585, 827, 1262, 2163
SduI GDGCHC 7 cut(s) 40, 254, 383, 1019, 1374, 1808, 2028
SfaNI GCATC 4 cut(s) 555, 1007, 1591, 1851
SfcI CTRYAG 2 cut(s) 1116, 1889
SinI GGWCC 3 cut(s) 8, 241, 823
SmiMI CAYNNNNRTG 2 cut(s) 1085, 2411
SmlI CTYRAG 4 cut(s) 65, 791, 2287, 2324
SmoI CTYRAG 4 cut(s) 65, 791, 2287, 2324
SsiI CCGC 2 cut(s) 579, 1107
SspI AATATT 1 cut(s) 2366
SspMI CTAG 9 cut(s) 32, 200, 329, 1152, 1334, 1481, 1502, 1676, 2150
SstI GAGCTC 5 cut(s) 383, 1019, 1374, 1808, 2028
StyD4I CCNGG 4 cut(s) 583, 825, 1260, 2161
StyI CCWWGG 1 cut(s) 1002
TaaI ACNGT 7 cut(s) 42, 676, 819, 954, 1165, 1625, 2283
TaiI ACGT 2 cut(s) 703, 2403
TaqI TCGA 3 cut(s) 122, 563, 2168
TaqII GACCGA 1 cut(s) 1910
TatI WGTACW 3 cut(s) 285, 1434, 2141
TfiI GAWTC 9 cut(s) 259, 320, 425, 851, 1172, 1287, 1715, 1827, 2375
TscAI CASTG 4 cut(s) 45, 679, 2062, 2288
TseFI GTSAC 6 cut(s) 670, 904, 1402, 1753, 2059, 2246
TseI GCWGC 6 cut(s) 473, 778, 1111, 1206, 1295, 1298
Tsp45I GTSAC 6 cut(s) 670, 904, 1402, 1753, 2059, 2246
TspRI CASTG 4 cut(s) 45, 679, 2062, 2288
Van91I CCANNNNNTGG 3 cut(s) 17, 1566, 2005
Vha464I CTTAAG 1 cut(s) 2287
VpaK11BI GGWCC 3 cut(s) 8, 241, 823
XapI RAATTY 2 cut(s) 1684, 1816
XbaI TCTAGA 1 cut(s) 1333
XceI RCATGY 2 cut(s) 1543, 1654
XmnI GAANNNNTTC 3 cut(s) 324, 855, 1188
XspI CTAG 9 cut(s) 32, 200, 329, 1152, 1334, 1481, 1502, 1676, 2150
ZrmI AGTACT 1 cut(s) 1436
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.