Rroxscaffold_2G00139010

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000039
Physical Location & Seq
Reverse (-)
77254760 .. 77261972
7213 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00139010.1

Sequence Viewer

Length: 966 bp
ATGGCAGTGGCATTGTTCGGAGGTGCGGGTTTGTCAGTAACATTTTGGACGCTGTGTGATTCTGTTAAGCGAATGAAGGATATACTGACGTTCAAACCCCAACTAAGGGATATCAAATCCACTTTGGACTCTTTGGAACCACTGATCAAAGAGATGGTAGAGTGTGAGAAGGAATTGGATGGTCAAGAGGAGGAGCTAGAGAATCTTAGAGTGGAAATGGAGAAAGGAGTCGAGCTTATTCGCAAGTGCTCGAAAGCGAGCAGGTTCAAGCAGTATAAGTACGGCAGCAGGCTTGTTGAATTGAGCAAGTCACTTCAGAGGCTGTTGGGGATATTGAAAGTGCAGGGGATAAGGGATGTGAAGAAGGCATTGGTTTCGGTGAGAAATATCGAGAATGTGGTGCACAGAATTGAAGGAAATTGTGTGATACAGAACAATCAGTCTGAAAAAATTGAAGGGTGGTGTGCTGTGCCTGAGCCTCCAACGATTACGGTTGGATTGGATGTGCCTTTGTGGGAATTGAAGAAGAAGCTCTTTTCTGACGGAGTATCGATGGTGATAATTACTGCTCCTGGAGGATGTGGAAAAACTACACTGGCAACAAAGTTGTGCAAGGATGCAGAAGTCAAAGGTATTATAGGATGTGCCTTTTTTAAGAAAACTCCAATGAGACTCGGCCACCGCGCCCACAATGGGCTGATAATTGTCGCTACGCGACAAAAAACTGAATCAAACGCGCGCCGGACGTGGCGCTCTTCCATGCCGCCGTGCTCTTCACGCCCTCCGGCTTTCGCGTCCCTCCATGTGCGGCCCCATGTGTCGTCCAACTTGATCAGGCCAAAGCTGGGCAAGAGAAAAGCCATGGCCTTGACATCTTTCTTGCCCTTGGTCAAGAAATGGCAAATGATACCCAGGCAAAACAGGCCCGGTGGAAGGAAAAAAGGAGTTGCCCAGTCAAAACCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
NB-ARC RPW8

Protein Analysis

321

Amino Acids

35.86

Weight (kDa)

9.98

Isoelectric Point (pI)

43.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RPW8 PF05659 5 - 129 6.6e-22 Arabidopsis broad-spectrum mildew resistance protein RPW8
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 252
AccII CGCG 5 cut(s) 684, 715, 737, 739, 794
AciI CCGC 4 cut(s) 26, 682, 764, 808
AcoI YGGCCR 1 cut(s) 676
AcuI CTGAAG 1 cut(s) 299
AfaI GTAC 1 cut(s) 281
AfiI CCNNNNNNNGG 5 cut(s) 105, 106, 693, 845, 933
AgsI TTSAA 7 cut(s) 94, 268, 299, 337, 413, 455, 523
AjiI CACGTC 1 cut(s) 747
AjnI CCWGG 2 cut(s) 571, 911
AjuI GAANNNNNNNTTGG 2 cut(s) 353, 385
AluBI AGCT 4 cut(s) 196, 235, 532, 844
AluI AGCT 4 cut(s) 196, 235, 532, 844
Alw21I GWGCWC 3 cut(s) 251, 405, 773
Alw26I GTCTC 1 cut(s) 664
Alw44I GTGCAC 1 cut(s) 401
AlwNI CAGNNNCTG 1 cut(s) 322
AoxI GGCC 5 cut(s) 676, 809, 836, 864, 923
ApaLI GTGCAC 1 cut(s) 401
ApeKI GCWGC 1 cut(s) 285
AspLEI GCGC 4 cut(s) 686, 739, 741, 753
AspS9I GGNCC 2 cut(s) 810, 924
AsuC2I CCSGG 1 cut(s) 927
AsuHPI GGTGA 2 cut(s) 391, 568
BaeGI GKGCMC 1 cut(s) 405
Bbv12I GWGCWC 3 cut(s) 251, 405, 773
BbvI GCAGC 1 cut(s) 297
BccI CCATC 3 cut(s) 148, 173, 547
BceAI ACGGC 2 cut(s) 298, 751
BcgI CGANNNNNNTGC 2 cut(s) 357, 391
BciT130I CCWGG 2 cut(s) 573, 913
BclI TGATCA 2 cut(s) 144, 831
BcnI CCSGG 1 cut(s) 927
BcoDI GTCTC 1 cut(s) 664
BfaI CTAG 1 cut(s) 197
BfoI RGCGCY 1 cut(s) 754
BfuAI ACCTGC 1 cut(s) 252
BisI GCNGC 3 cut(s) 286, 764, 809
BlsI GCNGC 3 cut(s) 287, 765, 810
Bme1390I CCNGG 3 cut(s) 573, 913, 927
BmgBI CACGTC 1 cut(s) 747
BmgT120I GGNCC 2 cut(s) 810, 924
BmiI GGNNCC 2 cut(s) 138, 812
BmrFI CCNGG 3 cut(s) 573, 913, 927
BmrI ACTGGG 1 cut(s) 946
BmsI GCATC 1 cut(s) 607
BmuI ACTGGG 1 cut(s) 946
BpmI CTGGAG 1 cut(s) 594
Bpu10I CCTNAGC 1 cut(s) 474
BpuMI CCSGG 1 cut(s) 927
Bsa29I ATCGAT 1 cut(s) 551
BsaJI CCNNGG 3 cut(s) 861, 885, 911
Bsc4I CCNNNNNNNGG 5 cut(s) 105, 106, 693, 845, 933
Bse1I ACTGG 2 cut(s) 600, 952
BseBI CCWGG 2 cut(s) 573, 913
BseCI ATCGAT 1 cut(s) 551
BseDI CCNNGG 3 cut(s) 861, 885, 911
BseGI GGATG 6 cut(s) 184, 361, 508, 584, 622, 647
BseLI CCNNNNNNNGG 5 cut(s) 105, 106, 693, 845, 933
BseMII CTCAG 1 cut(s) 465
BseNI ACTGG 2 cut(s) 600, 952
BsePI GCGCGC 1 cut(s) 737
BseRI GAGGAG 2 cut(s) 203, 206
BseSI GKGCMC 1 cut(s) 405
BseXI GCAGC 1 cut(s) 297
BseYI CCCAGC 1 cut(s) 844
BsgI GTGCAG 1 cut(s) 362
Bsh1236I CGCG 5 cut(s) 684, 715, 737, 739, 794
BshFI GGCC 5 cut(s) 678, 811, 838, 866, 925
BshVI ATCGAT 1 cut(s) 551
BsiHKAI GWGCWC 3 cut(s) 251, 405, 773
BsiSI CCGG 3 cut(s) 742, 785, 927
BslFI GGGAC 1 cut(s) 781
BslI CCNNNNNNNGG 5 cut(s) 105, 106, 693, 845, 933
BsmAI GTCTC 1 cut(s) 664
BsmFI GGGAC 1 cut(s) 781
BsnI GGCC 5 cut(s) 678, 811, 838, 866, 925
Bsp1286I GDGCHC 3 cut(s) 251, 405, 773
Bsp143I GATC 2 cut(s) 144, 831
Bsp19I CCATGG 1 cut(s) 861
BspACI CCGC 4 cut(s) 26, 682, 764, 808
BspANI GGCC 5 cut(s) 678, 811, 838, 866, 925
BspCNI CTCAG 1 cut(s) 466
BspDI ATCGAT 1 cut(s) 551
BspFNI CGCG 5 cut(s) 684, 715, 737, 739, 794
BspLI GGNNCC 2 cut(s) 138, 812
BspMI ACCTGC 1 cut(s) 252
BspQI GCTCTTC 2 cut(s) 760, 778
BsrI ACTGG 2 cut(s) 600, 952
BssECI CCNNGG 3 cut(s) 861, 885, 911
BssHII GCGCGC 1 cut(s) 737
BssMI GATC 2 cut(s) 144, 831
BssT1I CCWWGG 2 cut(s) 861, 885
Bst2UI CCWGG 2 cut(s) 573, 913
Bst4CI ACNGT 1 cut(s) 493
Bst6I CTCTTC 2 cut(s) 760, 778
BstC8I GCNNGC 3 cut(s) 259, 290, 739
BstDEI CTNAG 3 cut(s) 104, 206, 474
BstDSI CCRYGG 1 cut(s) 861
BstF5I GGATG 6 cut(s) 184, 361, 508, 584, 622, 647
BstFNI CGCG 5 cut(s) 684, 715, 737, 739, 794
BstH2I RGCGCY 1 cut(s) 754
BstHHI GCGC 4 cut(s) 686, 739, 741, 753
BstKTI GATC 2 cut(s) 147, 834
BstMAI GTCTC 1 cut(s) 664
BstMBI GATC 2 cut(s) 144, 831
BstMWI GCNNNNNNNGC 2 cut(s) 777, 922
BstNI CCWGG 2 cut(s) 573, 913
BstSCI CCNGG 3 cut(s) 571, 911, 925
BstSLI GKGCMC 1 cut(s) 405
BstUI CGCG 5 cut(s) 684, 715, 737, 739, 794
BstV1I GCAGC 1 cut(s) 297
Bsu15I ATCGAT 1 cut(s) 551
BsuRI GGCC 5 cut(s) 678, 811, 838, 866, 925
BsuTUI ATCGAT 1 cut(s) 551
BtgI CCRYGG 1 cut(s) 861
BtrI CACGTC 1 cut(s) 747
BtsCI GGATG 6 cut(s) 184, 361, 508, 584, 622, 647
BtsI GCAGTG 1 cut(s) 12
BtsIMutI CAGTG 3 cut(s) 12, 140, 593
BveI ACCTGC 1 cut(s) 252
Cac8I GCNNGC 3 cut(s) 259, 290, 739
CaiI CAGNNNCTG 1 cut(s) 322
CfoI GCGC 4 cut(s) 686, 739, 741, 753
Cfr13I GGNCC 2 cut(s) 810, 924
ClaI ATCGAT 1 cut(s) 551
CseI GACGC 2 cut(s) 58, 783
Csp6I GTAC 1 cut(s) 280
CviAII CATG 4 cut(s) 760, 803, 815, 862
CviQI GTAC 1 cut(s) 280
DdeI CTNAG 3 cut(s) 104, 206, 474
DpnI GATC 2 cut(s) 146, 833
DpnII GATC 2 cut(s) 144, 831
EaeI YGGCCR 1 cut(s) 676
Eam1104I CTCTTC 2 cut(s) 760, 778
EarI CTCTTC 2 cut(s) 760, 778
Eco130I CCWWGG 2 cut(s) 861, 885
Eco32I GATATC 1 cut(s) 112
Eco57I CTGAAG 1 cut(s) 299
EcoRII CCWGG 2 cut(s) 571, 911
EcoRV GATATC 1 cut(s) 112
EcoT14I CCWWGG 2 cut(s) 861, 885
ErhI CCWWGG 2 cut(s) 861, 885
FaeI CATG 4 cut(s) 763, 806, 818, 865
FaiI YATR 8 cut(s) 83, 276, 638, 761, 804, 816, 863, 964
FalI AAGNNNNNCTT 2 cut(s) 518, 550
FaqI GGGAC 1 cut(s) 781
FatI CATG 4 cut(s) 759, 802, 814, 861
FauI CCCGC 1 cut(s) 19
FbaI TGATCA 2 cut(s) 144, 831
Fnu4HI GCNGC 3 cut(s) 286, 764, 809
FokI GGATG 6 cut(s) 191, 368, 515, 591, 629, 654
Fsp4HI GCNGC 3 cut(s) 286, 764, 809
FspBI CTAG 1 cut(s) 197
GlaI GCGC 4 cut(s) 685, 738, 740, 752
GluI GCNGC 3 cut(s) 286, 764, 809
GsaI CCCAGC 1 cut(s) 848
GsuI CTGGAG 1 cut(s) 594
HaeII RGCGCY 1 cut(s) 754
HaeIII GGCC 5 cut(s) 678, 811, 838, 866, 925
HapII CCGG 3 cut(s) 742, 785, 927
HgaI GACGC 2 cut(s) 58, 783
HhaI GCGC 4 cut(s) 686, 739, 741, 753
Hin1II CATG 4 cut(s) 763, 806, 818, 865
Hin6I GCGC 4 cut(s) 684, 737, 739, 751
HinP1I GCGC 4 cut(s) 684, 737, 739, 751
HinfI GANTC 6 cut(s) 59, 128, 202, 228, 672, 728
HpaII CCGG 3 cut(s) 742, 785, 927
HphI GGTGA 2 cut(s) 391, 568
Hpy166II GTNNAC 1 cut(s) 403
Hpy188I TCNGA 4 cut(s) 20, 318, 445, 541
Hpy188III TCNNGA 3 cut(s) 185, 391, 892
Hpy8I GTNNAC 1 cut(s) 403
HpyAV CCTTC 6 cut(s) 70, 163, 358, 407, 449, 927
HpyCH4III ACNGT 1 cut(s) 493
HpyCH4IV ACGT 2 cut(s) 89, 746
HpyCH4V TGCA 4 cut(s) 343, 403, 612, 620
HpyF10VI GCNNNNNNNGC 2 cut(s) 777, 922
HpyF3I CTNAG 3 cut(s) 104, 206, 474
HpySE526I ACGT 2 cut(s) 89, 746
Hsp92II CATG 4 cut(s) 763, 806, 818, 865
HspAI GCGC 4 cut(s) 684, 737, 739, 751
Ksp22I TGATCA 2 cut(s) 144, 831
Kzo9I GATC 2 cut(s) 144, 831
LguI GCTCTTC 2 cut(s) 760, 778
LmnI GCTCC 2 cut(s) 193, 574
Lsp1109I GCAGC 1 cut(s) 297
LweI GCATC 1 cut(s) 607
MaeI CTAG 1 cut(s) 197
MaeII ACGT 2 cut(s) 89, 746
MaeIII GTNAC 2 cut(s) 37, 309
MalI GATC 2 cut(s) 146, 833
MboI GATC 2 cut(s) 144, 831
MboII GAAGA 5 cut(s) 373, 535, 538, 747, 765
MhlI GDGCHC 3 cut(s) 251, 405, 773
MluCI AATT 8 cut(s) 173, 299, 408, 418, 450, 518, 561, 702
MlyI GAGTC 3 cut(s) 122, 237, 666
MmeI TCCRAC 3 cut(s) 475, 506, 849
MnlI CCTC 8 cut(s) 14, 181, 184, 312, 489, 569, 792, 809
MseI TTAA 2 cut(s) 66, 654
MspI CCGG 3 cut(s) 742, 785, 927
MspR9I CCNGG 3 cut(s) 573, 913, 927
MvaI CCWGG 2 cut(s) 573, 913
MvnI CGCG 5 cut(s) 684, 715, 737, 739, 794
MwoI GCNNNNNNNGC 2 cut(s) 777, 922
NciI CCSGG 1 cut(s) 927
NcoI CCATGG 1 cut(s) 861
NdeII GATC 2 cut(s) 144, 831
NlaIII CATG 4 cut(s) 763, 806, 818, 865
NlaIV GGNNCC 2 cut(s) 138, 812
NmeAIII GCCGAG 1 cut(s) 654
NmuCI GTSAC 1 cut(s) 309
PauI GCGCGC 1 cut(s) 737
PciSI GCTCTTC 2 cut(s) 760, 778
PfeI GAWTC 3 cut(s) 59, 202, 728
PfoI TCCNGGA 1 cut(s) 571
PkrI GCNGC 3 cut(s) 287, 765, 810
PleI GAGTC 3 cut(s) 122, 236, 666
PpsI GAGTC 3 cut(s) 122, 236, 666
Psp6I CCWGG 2 cut(s) 571, 911
PspFI CCCAGC 1 cut(s) 844
PspGI CCWGG 2 cut(s) 571, 911
PspN4I GGNNCC 2 cut(s) 138, 812
PspPI GGNCC 2 cut(s) 810, 924
PstNI CAGNNNCTG 1 cut(s) 322
PteI GCGCGC 1 cut(s) 737
RsaI GTAC 1 cut(s) 281
RsaNI GTAC 1 cut(s) 280
SapI GCTCTTC 2 cut(s) 760, 778
SaqAI TTAA 2 cut(s) 66, 654
SatI GCNGC 3 cut(s) 286, 764, 809
Sau3AI GATC 2 cut(s) 144, 831
Sau96I GGNCC 2 cut(s) 810, 924
SchI GAGTC 3 cut(s) 122, 237, 666
ScrFI CCNGG 3 cut(s) 573, 913, 927
SduI GDGCHC 3 cut(s) 251, 405, 773
SetI ASST 9 cut(s) 25, 92, 198, 237, 266, 534, 634, 749, 846
SfaNI GCATC 1 cut(s) 607
Sse9I AATT 8 cut(s) 173, 299, 408, 418, 450, 518, 561, 702
SsiI CCGC 4 cut(s) 26, 682, 764, 808
SspMI CTAG 1 cut(s) 197
StyD4I CCNGG 3 cut(s) 571, 911, 925
StyI CCWWGG 2 cut(s) 861, 885
TaaI ACNGT 1 cut(s) 493
TaiI ACGT 2 cut(s) 92, 749
TaqI TCGA 4 cut(s) 231, 251, 390, 551
TasI AATT 8 cut(s) 173, 299, 408, 418, 450, 518, 561, 702
TauI GCSGC 2 cut(s) 766, 811
TfiI GAWTC 3 cut(s) 59, 202, 728
Tru1I TTAA 2 cut(s) 66, 654
Tru9I TTAA 2 cut(s) 66, 654
TscAI CASTG 3 cut(s) 12, 147, 600
TseFI GTSAC 1 cut(s) 309
TseI GCWGC 1 cut(s) 285
Tsp45I GTSAC 1 cut(s) 309
TspDTI ATGAA 1 cut(s) 89
TspGWI ACGGA 1 cut(s) 558
TspRI CASTG 3 cut(s) 12, 147, 600
VneI GTGCAC 1 cut(s) 401
XspI CTAG 1 cut(s) 197
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.