Rh2AG169900

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Forward (+)
16119056 .. 16122851
3796 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG169900.1

Sequence Viewer

Length: 1767 bp
ATGGCCAATCCAGCGGATGCTTTCGCCGGGGCTGCTGCAGGATTACTATTCAGTGTGCTCTATGATGGCCTCAAGGAGCTGACCACCAAGTATGTGCTGTTCAAACACGTCCTCAAAAGCGTCAAATCCACACTCGAATCTCTGGAGCAAGTGGTTCAAGACATAGCACGACTTAACGAGGATCTGGATCGCCCCAAGGAAGAACTAGCGAGTCTAGAAACCCAACTAGAGAAGGGCAAAGTGCTCGTTGCCAAGTGCGGCAAGGTTCGTGTGTGGAGTGTGTACAAGAAGTACAAGTACTCCAGGAAACTTCTTGGATGGAATGACAGTCTTAAAGAACAGTTGGAGATGCTCAAAGTTCATGCAATAAGAGATGGGAAGGAGACCCTGACAACGGTCAAGAGAACAGAGAAGACTGTGAGCCAAATCGAATCGACCAGTTTCAATATAAAGGAGGGAGTGGAGCAAATTGAGACCAACACTGCAAATCTACAGGTGGTGGTCAGCCGAGTGGAAGCGAGCGTTTCGAATATAGAGGCTGGGATAAAGCAGATACAACCGGAAGCTAAAATTGAAGCTTGGTGTGCAGTACCTGAACTTCCAACTCTTACAGTTGGATTGGATGGGCCTTTGAACGAACTGAAGATGAAGTTGTTCAACAATGGAGTGTCAATGGTTGTGCTGACCGCTCCCGGAGGATGTGGAAAAACCACATTGGCAACAAAGTTCTGTCAAGATGAGCAAGTCCAAGAGAAATTCAAGAACAATATATTTTTTGTCACTGTTTCCAAAATGCCAAACTTCTACCTTATTGTACAAGAGCTATACCAAAGCAAGGGTAACCAGGCACCTACTTTTAAAGATGACGAAAATGCACTCAAGTGGCTGCAAAAATTTATGAAGGAAGAAGGACAAAACCCTTTACTGTTGGTCTTGGATGATGTTTCGTCTGGATCAGATTCTTTACTTGCGAAGTTTGAATTCAAAATGCAAGATTACAAAGTTTTAGTGACATCAAGATCTGAATTTCCGAGATATGGCTCCTATGCTTTGCAGTCATTGGATTTTGACAATGCAATGAAACTCTTTCATCAAGCAGCATCCTTGGGAGAAAAAAGTTCGCATATTCCACTAGAAATTTCAAGACAGGTAGTAGAGGGCTGTAAGGGATTTCCACTTGCTATAACAGTGGCCGGAAAATCACTTTGCGGACAGCCTGTAGAGACTTGGCAGAAAAGACTCATTGAATGGTCCAAAGGTTCTTCGATTCTTGATTCCGAGACTGAATTGCTTCTTCGCCTCCAAACCAGTTTAGATGTCTCGAATAAGGAAATGAGGATGGTCAAAGAATGTTTCTTAGACCTAGGTTCATTTCCTGAAGATCAAAGAATCCCTGTTGCTGCCCTCATTGATATCTGGACTGAGTCTTACGGTTCACTGGATGAAGACATTTTGTGTGTTGCAAACCTCCACCAGATCACAAACCGAAGTCTAGCTAATCTTGTAGTCACAAGGAAGGACAAGCTGCAGGGGGATGGATATTACAGTGAACATTTTGTTACCCAGCATGATCTGCTTAGGGAGCTGGCTATCTATGAGACAAAACAAGAGGACCCTGAACATAGAGAAAGACTAATTGTAAACATATTTGAAGACAATTTTCCCAAGTGGTGGAGTGAACAGAAGTATCAATGCATGAAGGCTCGCTTGTTATCTATCTCAACTGGTTGTCCCGTCTTTCTTTCTTTAGCATTTATACATGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

588

Amino Acids

66.43

Weight (kDa)

5.8

Isoelectric Point (pI)

41.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RPW8 PF05659 5 - 138 2.1e-27 Arabidopsis broad-spectrum mildew resistance protein RPW8
NB-ARC PF00931 210 - 342 7.3e-15 NB-ARC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 847
AccB7I CCANNNNNTGG 1 cut(s) 1671
AccBSI CCGCTC 1 cut(s) 689
AciI CCGC 4 cut(s) 14, 258, 687, 1209
AclWI GGATC 3 cut(s) 189, 195, 961
AcoI YGGCCR 2 cut(s) 3, 1191
AcsI RAATTY 5 cut(s) 755, 893, 980, 1025, 1137
AcuI CTGAAG 2 cut(s) 662, 1398
AfaI GTAC 5 cut(s) 284, 293, 299, 591, 816
AfiI CCNNNNNNNGG 4 cut(s) 394, 835, 1037, 1671
AflIII ACRYGT 2 cut(s) 106, 1759
AjiI CACGTC 1 cut(s) 109
AjnI CCWGG 2 cut(s) 302, 843
AleI CACNNNNGTG 1 cut(s) 880
AluBI AGCT 7 cut(s) 79, 566, 578, 823, 1496, 1525, 1585
AluI AGCT 7 cut(s) 79, 566, 578, 823, 1496, 1525, 1585
Alw21I GWGCWC 2 cut(s) 60, 246
Alw26I GTCTC 6 cut(s) 377, 467, 1217, 1274, 1324, 1592
AlwI GGATC 3 cut(s) 189, 195, 961
AlwNI CAGNNNCTG 1 cut(s) 593
AoxI GGCC 4 cut(s) 3, 67, 626, 1191
ApeKI GCWGC 6 cut(s) 32, 35, 886, 1097, 1400, 1525
ApoI RAATTY 5 cut(s) 755, 893, 980, 1025, 1137
Asp700I GAANNNNTTC 2 cut(s) 653, 1290
AspA2I CCTAGG 1 cut(s) 1363
AspS9I GGNCC 3 cut(s) 626, 1251, 1612
AsuC2I CCSGG 2 cut(s) 28, 693
AsuII TTCGAA 1 cut(s) 527
AvaII GGWCC 2 cut(s) 1251, 1612
AvrII CCTAGG 1 cut(s) 1363
BaeI ACNNNNGTAYC 2 cut(s) 1670, 1703
BalI TGGCCA 1 cut(s) 5
BanI GGYRCC 1 cut(s) 847
BarI GAAGNNNNNNTAC 4 cut(s) 281, 313, 582, 614
BbsI GAAGAC 3 cut(s) 419, 1452, 1659
Bbv12I GWGCWC 2 cut(s) 60, 246
BbvI GCAGC 6 cut(s) 19, 22, 873, 1109, 1387, 1512
BccI CCATC 6 cut(s) 59, 312, 368, 617, 1333, 1529
BcgI CGANNNNNNTGC 2 cut(s) 226, 260
BciT130I CCWGG 2 cut(s) 304, 845
BcnI CCSGG 2 cut(s) 28, 693
BcoDI GTCTC 6 cut(s) 377, 467, 1217, 1274, 1324, 1592
BfaI CTAG 6 cut(s) 206, 215, 227, 1133, 1364, 1493
BfmI CTRYAG 4 cut(s) 36, 491, 1218, 1526
BglII AGATCT 1 cut(s) 1019
BisI GCNGC 7 cut(s) 33, 36, 259, 887, 1098, 1401, 1526
BlnI CCTAGG 1 cut(s) 1363
BlsI GCNGC 7 cut(s) 34, 37, 260, 888, 1099, 1402, 1527
BmcAI AGTACT 1 cut(s) 299
Bme1390I CCNGG 4 cut(s) 28, 304, 693, 845
Bme18I GGWCC 2 cut(s) 1251, 1612
BmgBI CACGTC 1 cut(s) 109
BmgT120I GGNCC 3 cut(s) 626, 1251, 1612
BmiI GGNNCC 3 cut(s) 849, 1042, 1614
BmrFI CCNGG 4 cut(s) 28, 304, 693, 845
BmsI GCATC 3 cut(s) 7, 339, 1109
BoxI GACNNNNGTC 1 cut(s) 395
BpiI GAAGAC 3 cut(s) 419, 1452, 1659
BpmI CTGGAG 2 cut(s) 164, 286
Bpu10I CCTNAGC 1 cut(s) 1577
Bpu14I TTCGAA 1 cut(s) 527
BpuEI CTTGAG 2 cut(s) 56, 863
BpuMI CCSGG 2 cut(s) 28, 693
BsaBI GATNNNNATC 1 cut(s) 186
BsaI GGTCTC 2 cut(s) 377, 467
BsaJI CCNNGG 4 cut(s) 27, 195, 1104, 1363
BsaWI WCCGGW 1 cut(s) 559
BsaXI ACNNNNNCTCC 2 cut(s) 284, 314
Bsc4I CCNNNNNNNGG 4 cut(s) 394, 835, 1037, 1671
Bse1I ACTGG 4 cut(s) 438, 1308, 1443, 1729
Bse3DI GCAATG 1 cut(s) 1083
Bse8I GATNNNNATC 1 cut(s) 186
BseBI CCWGG 2 cut(s) 304, 845
BseDI CCNNGG 4 cut(s) 27, 195, 1104, 1363
BseGI GGATG 9 cut(s) 22, 323, 628, 704, 943, 1100, 1344, 1447, 1540
BseJI GATNNNNATC 1 cut(s) 186
BseLI CCNNNNNNNGG 4 cut(s) 394, 835, 1037, 1671
BseMI GCAATG 1 cut(s) 1083
BseMII CTCAG 1 cut(s) 1413
BseNI ACTGG 4 cut(s) 438, 1308, 1443, 1729
BseXI GCAGC 6 cut(s) 19, 22, 873, 1109, 1387, 1512
BseYI CCCAGC 2 cut(s) 539, 1563
BsgI GTGCAG 1 cut(s) 606
BshFI GGCC 4 cut(s) 5, 69, 628, 1193
BshNI GGYRCC 1 cut(s) 847
BsiHKAI GWGCWC 2 cut(s) 60, 246
BsiSI CCGG 4 cut(s) 27, 560, 693, 1194
BslFI GGGAC 1 cut(s) 1716
BslI CCNNNNNNNGG 4 cut(s) 394, 835, 1037, 1671
BsmAI GTCTC 6 cut(s) 377, 467, 1217, 1274, 1324, 1592
BsmFI GGGAC 1 cut(s) 1716
BsnI GGCC 4 cut(s) 5, 69, 628, 1193
Bso31I GGTCTC 2 cut(s) 377, 467
Bsp119I TTCGAA 1 cut(s) 527
Bsp1286I GDGCHC 2 cut(s) 60, 246
Bsp1407I TGTACA 2 cut(s) 282, 814
Bsp143I GATC 7 cut(s) 181, 187, 953, 1019, 1381, 1476, 1570
BspACI CCGC 4 cut(s) 14, 258, 687, 1209
BspANI GGCC 4 cut(s) 5, 69, 628, 1193
BspCNI CTCAG 1 cut(s) 1414
BspLI GGNNCC 3 cut(s) 849, 1042, 1614
BspMAI CTGCAG 2 cut(s) 40, 1530
BspPI GGATC 3 cut(s) 189, 195, 961
BspT104I TTCGAA 1 cut(s) 527
BspT107I GGYRCC 1 cut(s) 847
BspTNI GGTCTC 2 cut(s) 377, 467
BsrBI CCGCTC 1 cut(s) 689
BsrDI GCAATG 1 cut(s) 1083
BsrGI TGTACA 2 cut(s) 282, 814
BsrI ACTGG 4 cut(s) 438, 1308, 1443, 1729
BssECI CCNNGG 4 cut(s) 27, 195, 1104, 1363
BssMI GATC 7 cut(s) 181, 187, 953, 1019, 1381, 1476, 1570
BssT1I CCWWGG 3 cut(s) 195, 1104, 1363
Bst2UI CCWGG 2 cut(s) 304, 845
BstAPI GCANNNNNTGC 1 cut(s) 1573
BstAUI TGTACA 2 cut(s) 282, 814
BstBI TTCGAA 1 cut(s) 527
BstC8I GCNNGC 3 cut(s) 520, 1587, 1705
BstDEI CTNAG 3 cut(s) 1357, 1422, 1577
BstEII GGTNACC 1 cut(s) 839
BstF5I GGATG 9 cut(s) 22, 323, 628, 704, 943, 1100, 1344, 1447, 1540
BstKTI GATC 7 cut(s) 184, 190, 956, 1022, 1384, 1479, 1573
BstMAI GTCTC 6 cut(s) 377, 467, 1217, 1274, 1324, 1592
BstMBI GATC 7 cut(s) 181, 187, 953, 1019, 1381, 1476, 1570
BstMWI GCNNNNNNNGC 5 cut(s) 11, 32, 584, 1573, 1582
BstNI CCWGG 2 cut(s) 304, 845
BstNSI RCATGY 1 cut(s) 1763
BstPAI GACNNNNGTC 1 cut(s) 395
BstPI GGTNACC 1 cut(s) 839
BstSCI CCNGG 4 cut(s) 26, 302, 691, 843
BstSFI CTRYAG 4 cut(s) 36, 491, 1218, 1526
BstV1I GCAGC 6 cut(s) 19, 22, 873, 1109, 1387, 1512
BstV2I GAAGAC 3 cut(s) 419, 1452, 1659
BstX2I RGATCY 2 cut(s) 181, 1019
BstYI RGATCY 2 cut(s) 181, 1019
BsuRI GGCC 4 cut(s) 5, 69, 628, 1193
BtrI CACGTC 1 cut(s) 109
BtsCI GGATG 9 cut(s) 22, 323, 628, 704, 943, 1100, 1344, 1447, 1540
BtsI GCAGTG 1 cut(s) 480
BtsIMutI CAGTG 6 cut(s) 58, 480, 780, 1194, 1436, 1552
Cac8I GCNNGC 3 cut(s) 520, 1587, 1705
CaiI CAGNNNCTG 1 cut(s) 593
Cfr13I GGNCC 3 cut(s) 626, 1251, 1612
CseI GACGC 1 cut(s) 109
Csp6I GTAC 5 cut(s) 283, 292, 298, 590, 815
CviAII CATG 4 cut(s) 362, 1568, 1696, 1760
CviQI GTAC 5 cut(s) 283, 292, 298, 590, 815
DdeI CTNAG 3 cut(s) 1357, 1422, 1577
DpnI GATC 7 cut(s) 183, 189, 955, 1021, 1383, 1478, 1572
DpnII GATC 7 cut(s) 181, 187, 953, 1019, 1381, 1476, 1570
DraI TTTAAA 1 cut(s) 859
EaeI YGGCCR 2 cut(s) 3, 1191
Eco130I CCWWGG 3 cut(s) 195, 1104, 1363
Eco31I GGTCTC 2 cut(s) 377, 467
Eco32I GATATC 1 cut(s) 1414
Eco47I GGWCC 2 cut(s) 1251, 1612
Eco57I CTGAAG 2 cut(s) 662, 1398
Eco91I GGTNACC 1 cut(s) 839
EcoO109I RGGNCCY 1 cut(s) 1612
EcoO65I GGTNACC 1 cut(s) 839
EcoRI GAATTC 1 cut(s) 980
EcoRII CCWGG 2 cut(s) 302, 843
EcoRV GATATC 1 cut(s) 1414
EcoT14I CCWWGG 3 cut(s) 195, 1104, 1363
EcoT22I ATGCAT 1 cut(s) 1697
ErhI CCWWGG 3 cut(s) 195, 1104, 1363
FaeI CATG 4 cut(s) 365, 1571, 1699, 1763
FalI AAGNNNNNCTT 2 cut(s) 1691, 1723
FaqI GGGAC 1 cut(s) 1716
FatI CATG 4 cut(s) 361, 1567, 1695, 1759
Fnu4HI GCNGC 7 cut(s) 33, 36, 259, 887, 1098, 1401, 1526
FokI GGATG 9 cut(s) 29, 330, 635, 711, 950, 1087, 1351, 1454, 1547
Fsp4HI GCNGC 7 cut(s) 33, 36, 259, 887, 1098, 1401, 1526
FspBI CTAG 6 cut(s) 206, 215, 227, 1133, 1364, 1493
GluI GCNGC 7 cut(s) 33, 36, 259, 887, 1098, 1401, 1526
GsaI CCCAGC 2 cut(s) 543, 1567
GsuI CTGGAG 2 cut(s) 164, 286
HaeIII GGCC 4 cut(s) 5, 69, 628, 1193
HapII CCGG 4 cut(s) 27, 560, 693, 1194
HgaI GACGC 1 cut(s) 109
Hin1II CATG 4 cut(s) 365, 1571, 1699, 1763
HindIII AAGCTT 1 cut(s) 576
HinfI GANTC 9 cut(s) 137, 211, 431, 959, 1239, 1267, 1274, 1389, 1424
HpaII CCGG 4 cut(s) 27, 560, 693, 1194
Hpy166II GTNNAC 5 cut(s) 283, 1436, 1550, 1642, 1679
Hpy188I TCNGA 4 cut(s) 958, 1024, 1032, 1279
Hpy8I GTNNAC 5 cut(s) 283, 1436, 1550, 1642, 1679
HpyAV CCTTC 6 cut(s) 226, 373, 895, 902, 1510, 1693
HpyCH4IV ACGT 1 cut(s) 108
HpyF10VI GCNNNNNNNGC 5 cut(s) 11, 32, 584, 1573, 1582
HpyF3I CTNAG 3 cut(s) 1357, 1422, 1577
HpySE526I ACGT 1 cut(s) 108
Hsp92II CATG 4 cut(s) 365, 1571, 1699, 1763
Kzo9I GATC 7 cut(s) 181, 187, 953, 1019, 1381, 1476, 1570
LmnI GCTCC 6 cut(s) 76, 145, 463, 694, 1046, 1582
Lsp1109I GCAGC 6 cut(s) 19, 22, 873, 1109, 1387, 1512
LweI GCATC 3 cut(s) 7, 339, 1109
MaeI CTAG 6 cut(s) 206, 215, 227, 1133, 1364, 1493
MaeII ACGT 1 cut(s) 108
MaeIII GTNAC 5 cut(s) 778, 839, 1009, 1507, 1558
MalI GATC 7 cut(s) 183, 189, 955, 1021, 1383, 1478, 1572
MbiI CCGCTC 1 cut(s) 689
MboI GATC 7 cut(s) 181, 187, 953, 1019, 1381, 1476, 1570
MboII GAAGA 9 cut(s) 212, 424, 655, 917, 1254, 1286, 1391, 1457, 1664
MflI RGATCY 2 cut(s) 181, 1019
MhlI GDGCHC 2 cut(s) 60, 246
MlsI TGGCCA 1 cut(s) 5
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 3 cut(s) 220, 1233, 1433
MmeI TCCRAC 3 cut(s) 324, 595, 626
Mox20I TGGCCA 1 cut(s) 5
Mph1103I ATGCAT 1 cut(s) 1697
MroXI GAANNNNTTC 2 cut(s) 653, 1290
MscI TGGCCA 1 cut(s) 5
MseI TTAA 3 cut(s) 174, 333, 858
MslI CAYNNNNRTG 1 cut(s) 880
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 1 cut(s) 14
MspI CCGG 4 cut(s) 27, 560, 693, 1194
MspR9I CCNGG 4 cut(s) 28, 304, 693, 845
MvaI CCWGG 2 cut(s) 304, 845
MwoI GCNNNNNNNGC 5 cut(s) 11, 32, 584, 1573, 1582
NciI CCSGG 2 cut(s) 28, 693
NdeII GATC 7 cut(s) 181, 187, 953, 1019, 1381, 1476, 1570
NlaIII CATG 4 cut(s) 365, 1571, 1699, 1763
NlaIV GGNNCC 3 cut(s) 849, 1042, 1614
NmeAIII GCCGAG 1 cut(s) 533
NmuCI GTSAC 3 cut(s) 778, 1009, 1507
NsiI ATGCAT 1 cut(s) 1697
NspI RCATGY 1 cut(s) 1763
NspV TTCGAA 1 cut(s) 527
OliI CACNNNNGTG 1 cut(s) 880
PciI ACATGT 1 cut(s) 1759
PdmI GAANNNNTTC 2 cut(s) 653, 1290
PfeI GAWTC 6 cut(s) 137, 431, 959, 1267, 1274, 1389
PflFI GACNNNGTC 1 cut(s) 1423
PflMI CCANNNNNTGG 1 cut(s) 1671
PfoI TCCNGGA 2 cut(s) 302, 691
PkrI GCNGC 7 cut(s) 34, 37, 260, 888, 1099, 1402, 1527
PleI GAGTC 3 cut(s) 219, 1233, 1432
PpsI GAGTC 3 cut(s) 219, 1233, 1432
PpuMI RGGWCCY 1 cut(s) 1612
PscI ACATGT 1 cut(s) 1759
PshAI GACNNNNGTC 1 cut(s) 395
Psp5II RGGWCCY 1 cut(s) 1612
Psp6I CCWGG 2 cut(s) 302, 843
PspEI GGTNACC 1 cut(s) 839
PspFI CCCAGC 2 cut(s) 539, 1563
PspGI CCWGG 2 cut(s) 302, 843
PspN4I GGNNCC 3 cut(s) 849, 1042, 1614
PspPI GGNCC 3 cut(s) 626, 1251, 1612
PspPPI RGGWCCY 1 cut(s) 1612
PsrI GAACNNNNNNTAC 2 cut(s) 83, 115
PstI CTGCAG 2 cut(s) 40, 1530
PstNI CAGNNNCTG 1 cut(s) 593
PsuI RGATCY 2 cut(s) 181, 1019
PsyI GACNNNGTC 1 cut(s) 1423
RsaI GTAC 5 cut(s) 284, 293, 299, 591, 816
RsaNI GTAC 5 cut(s) 283, 292, 298, 590, 815
RseI CAYNNNNRTG 1 cut(s) 880
SaqAI TTAA 3 cut(s) 174, 333, 858
SatI GCNGC 7 cut(s) 33, 36, 259, 887, 1098, 1401, 1526
Sau3AI GATC 7 cut(s) 181, 187, 953, 1019, 1381, 1476, 1570
Sau96I GGNCC 3 cut(s) 626, 1251, 1612
ScaI AGTACT 1 cut(s) 299
SchI GAGTC 3 cut(s) 220, 1233, 1433
ScrFI CCNGG 4 cut(s) 28, 304, 693, 845
SduI GDGCHC 2 cut(s) 60, 246
SfaNI GCATC 3 cut(s) 7, 339, 1109
SfcI CTRYAG 4 cut(s) 36, 491, 1218, 1526
SfuI TTCGAA 1 cut(s) 527
SinI GGWCC 2 cut(s) 1251, 1612
SmiMI CAYNNNNRTG 1 cut(s) 880
SmlI CTYRAG 2 cut(s) 71, 878
SmoI CTYRAG 2 cut(s) 71, 878
SsiI CCGC 4 cut(s) 14, 258, 687, 1209
SspMI CTAG 6 cut(s) 206, 215, 227, 1133, 1364, 1493
StyD4I CCNGG 4 cut(s) 26, 302, 691, 843
StyI CCWWGG 3 cut(s) 195, 1104, 1363
TaiI ACGT 1 cut(s) 111
TaqI TCGA 6 cut(s) 135, 429, 434, 527, 1265, 1322
TatI WGTACW 4 cut(s) 282, 291, 297, 814
TauI GCSGC 1 cut(s) 261
TfiI GAWTC 6 cut(s) 137, 431, 959, 1267, 1274, 1389
Tru1I TTAA 3 cut(s) 174, 333, 858
Tru9I TTAA 3 cut(s) 174, 333, 858
TscAI CASTG 6 cut(s) 58, 487, 787, 1194, 1443, 1552
TseFI GTSAC 3 cut(s) 778, 1009, 1507
TseI GCWGC 6 cut(s) 32, 35, 886, 1097, 1400, 1525
Tsp45I GTSAC 3 cut(s) 778, 1009, 1507
TspDTI ATGAA 8 cut(s) 350, 662, 914, 1079, 1094, 1359, 1458, 1712
TspRI CASTG 6 cut(s) 58, 487, 787, 1194, 1443, 1552
Tth111I GACNNNGTC 1 cut(s) 1423
Van91I CCANNNNNTGG 1 cut(s) 1671
VpaK11BI GGWCC 2 cut(s) 1251, 1612
XapI RAATTY 5 cut(s) 755, 893, 980, 1025, 1137
XbaI TCTAGA 1 cut(s) 214
XceI RCATGY 1 cut(s) 1763
XmaJI CCTAGG 1 cut(s) 1363
XmnI GAANNNNTTC 2 cut(s) 653, 1290
XspI CTAG 6 cut(s) 206, 215, 227, 1133, 1364, 1493
ZrmI AGTACT 1 cut(s) 299
Zsp2I ATGCAT 1 cut(s) 1697
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.