RLG00000017319

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Forward (+)
15230010 .. 15233034
3025 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000017319

Sequence Viewer

Length: 2247 bp
ATGTTTGATCCAGTCGATATACTATTCGAGGAGCTGTATGCTGCTGTTAAAGAGCTGATAAAAAAGAATATCATTTTCAATTCCACACTCAAAGCCATCAAATCCAAGCTAGACTCTCTAAAACCAGTGATCCTAAAGATAGCAGAATGCAACGACGCACTGGATATCCCAAAGAAGGAACTAGAAGGTCTAGGAGAAGTAATGAAGTATGGCATGGAGCTTGTTCTCAAGTGCTCAAAGATCCACACGTGGAACGTCTACAAACGGTACAAGTACGCCAAAAAACTCCTTGAATGGGATGAATCTCTTCAAGGAGTGTTGATTATACTGAATGTACAGAGCAACCGGGATGTCAAGACAATCGCAGTTGCAGTAGGACATATGGAGGCTGAAGTCGGGATTGTGAAGACAGACGTAGGGAGTATAAAGGCGGTGATCAACAAAATGAATGAGAATTTTGTGATACAGAATCACTCACCTAAAGCATGGTGTGCATTACCTGAACTTCCAGAGTTTCTTGTTGGATTGGATGAGGCTTTGAGTGAACTGAAGATGAAGCTTCTTAAGAATGGGGTGTCAAGGCTGGTGCTGACTGCTCCTGGAGGATGTGGGAAGACTACTTTAGCAACCAAATTCTGTCAAGATAAGCAAGTCAAAGATAAATTCAAGGAAAATATCATATTTATTAACGTCTCAAAAAGACCAAACTTGGACCTTGTTGTTCAAGAACTGCGTCAACCAAGTATGAATTCCCAGGTTCCCACTTTCGGAAGTGAAGTAATTGCAGTTAGGTGGCTGCAAGAGTTTCTGAAGGAAACAGGAGAGAATCCGTCATTGTTGGTCCTTGATGATGTTTGGCCGGGATCAGAATCTCTCCTACAGAAGTTTGATGAATTGAAAATGCCAAATTACAAAATTTTGGTGACATCAAGATATGAGTTCTCAGGATTTGGTTCGCCTTATAGACTAGAACCACTGAATTATGTAGATGCAATGGCTCTTTTCCACGATTCAGCTTCCCTAGGAGATAAGAGCTCTCATGTTCCAAAGGATCTTCCAAGAAAGATAGTTGAGTGTTGTAAAGGATTTCCACTTGCCATTACAGTGGTTGGAAGATCACTTTGTGGGAAACCTACAGAGTTCTGGCTTAAAAGAGTAAGGGCACCGTCTAAAGGTGCTTCTGTTCTTGATTCTTCAACTGATCATGACCTGCTCATGTGCCTTCAAAAAGATACCATCCTGAAGAATTGTTTCTTGGACCTGGGCTCATTTCCTGAAGGCAAGAGAATCCCTGCTTCTGCTCTAATTGATATATGGAAAGAGTTATATGAATTAGATGAAGATTCTCTGTCCATTGCATACCTCCAAGAGCTTGCCACTCGAAGCCTAGTTAACCTTGTAGTTACGAGGAATGAGAGTATGGAGGTGGATGGGTACTACAGTGAACACTTTGTCACTCAGCATGATTTGCTTAGACAGCTAGCCATCTACGAAACGAAACTAGATCCAAACAAAAGAAGATTGATCATAGACAAATGGGGAGACAATCTACCCAAGTGCTTGACCGAACAGAAGCATCAACCCCTCAAGACCCAACTATTATCAATCTCCTCTGATGGAGTGTTCTCAACAACTTTGAACAACATTCAACTATCAGAAGTTGAGGTTCTAGTTTTAAACTTCAGTACAGATATCTATGCTTTACCTGAATTTGTGGCAAAAATGGAAAGCTTGAAGGTTCTAATAGTCACAAATCATGGTTCCTTACCAGCCAAATTGAGTAACTTTCAACTACTGGATTGTTTACCAAATCTGAAGACAATCAGACTAGAGCGAATTTCAATTCCTTCCATAGCCAAGAATCCTGTAGACGTGAAGAGTCTAAAGAAGATATCCCTATTCATGTGTAGCATTGGTCAAGTTTTCAGCAACTCTTCCTTCCAAATTTCGTATGCATTTCCAAATCTAGAGGAATTGAACATCGACTATTGCAGTGACTTGGTGGAATTGCCTGTTGATCTCTGTGATCTGATTGAGCTAAGGAAGCTCAGTATCACCCACTGTCATAACCTATCTGCCTTGCCTGATGAGATTGGGAAGCTGATCAAATTGGAAGTCTTGAGGCTAAAGTCTTGTACTGACTTAAAAACGTTTCCGGCCTCAATTAAGGACCTTGAAAAGTTAAACTTTCTCGACATATCTGATTGTTCAGCATCAAGGAGTTGCCTGACAACATTGGTGAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

749

Amino Acids

84.2

Weight (kDa)

6.38

Isoelectric Point (pI)

40.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RPW8 PF05659 7 - 130 7.8e-24 Arabidopsis broad-spectrum mildew resistance protein RPW8
NB-ARC PF00931 179 - 311 4.9e-12 NB-ARC domain
LRR_14 PF23598 631 - 737 5.3e-10 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1218
AccB1I GGYRCC 1 cut(s) 1162
AccI GTMKAC 2 cut(s) 258, 1869
AciI CCGC 1 cut(s) 431
AclI AACGTT 1 cut(s) 2150
AclWI GGATC 6 cut(s) 2, 124, 235, 871, 1059, 1499
AcoI YGGCCR 1 cut(s) 857
AcsI RAATTY 8 cut(s) 454, 632, 662, 748, 915, 1709, 1836, 1944
AcuI CTGAAG 7 cut(s) 411, 569, 830, 1262, 1296, 1666, 1835
AcvI CACGTG 1 cut(s) 249
AdeI CACNNNGTG 1 cut(s) 1124
AfaI GTAC 6 cut(s) 269, 275, 336, 1436, 1687, 2137
AfiI CCNNNNNNNGG 4 cut(s) 175, 295, 767, 1172
AflII CTTAAG 1 cut(s) 563
AflIII ACRYGT 1 cut(s) 246
AjiI CACGTC 1 cut(s) 1873
AjnI CCWGG 3 cut(s) 598, 753, 1260
AjuI GAANNNNNNNTTGG 4 cut(s) 733, 765, 1238, 1270
Alw21I GWGCWC 2 cut(s) 236, 1037
Alw26I GTCTC 2 cut(s) 697, 1536
AlwI GGATC 6 cut(s) 2, 124, 235, 871, 1059, 1499
AoxI GGCC 2 cut(s) 857, 2157
ApeKI GCWGC 2 cut(s) 41, 796
ApoI RAATTY 8 cut(s) 454, 632, 662, 748, 915, 1709, 1836, 1944
ArsI GACNNNNNNTTYG 2 cut(s) 2100, 2132
Asp700I GAANNNNTTC 2 cut(s) 306, 1250
AspA2I CCTAGG 1 cut(s) 1021
AspS9I GGNCC 4 cut(s) 712, 841, 1258, 2170
AsuC2I CCSGG 2 cut(s) 347, 861
AsuHPI GGTGA 4 cut(s) 445, 468, 934, 2047
AsuNHI GCTAGC 1 cut(s) 1480
AvaII GGWCC 4 cut(s) 712, 841, 1258, 2170
AvrII CCTAGG 1 cut(s) 1021
BaeGI GKGCMC 1 cut(s) 1165
BaeI ACNNNNGTAYC 2 cut(s) 1426, 1459
BanI GGYRCC 1 cut(s) 1162
BanII GRGCYC 2 cut(s) 1037, 1268
BbrPI CACGTG 1 cut(s) 249
BbsI GAAGAC 3 cut(s) 413, 620, 1823
Bbv12I GWGCWC 2 cut(s) 236, 1037
BbvI GCAGC 2 cut(s) 28, 783
BccI CCATC 5 cut(s) 104, 1244, 1424, 1493, 1610
BciT130I CCWGG 3 cut(s) 600, 755, 1262
BclI TGATCA 4 cut(s) 435, 1201, 1524, 2103
BcnI CCSGG 2 cut(s) 347, 861
BcoDI GTCTC 2 cut(s) 697, 1536
BfmI CTRYAG 4 cut(s) 878, 1134, 1438, 1866
BfrI CTTAAG 1 cut(s) 563
BfuAI ACCTGC 1 cut(s) 1218
BisI GCNGC 2 cut(s) 42, 797
BlnI CCTAGG 1 cut(s) 1021
BlsI GCNGC 2 cut(s) 43, 798
Bme1390I CCNGG 5 cut(s) 347, 600, 755, 861, 1262
Bme18I GGWCC 4 cut(s) 712, 841, 1258, 2170
BmgBI CACGTC 1 cut(s) 1873
BmgT120I GGNCC 4 cut(s) 712, 841, 1258, 2170
BmiI GGNNCC 3 cut(s) 759, 1164, 1762
BmrFI CCNGG 5 cut(s) 347, 600, 755, 861, 1262
BmsI GCATC 3 cut(s) 979, 1585, 2222
BmtI GCTAGC 1 cut(s) 1484
BpiI GAAGAC 3 cut(s) 413, 620, 1823
BpmI CTGGAG 1 cut(s) 621
Bpu10I CCTNAGC 1 cut(s) 2039
BpuEI CTTGAG 3 cut(s) 212, 1571, 2140
BpuMI CCSGG 2 cut(s) 347, 861
BsaAI YACGTR 1 cut(s) 249
BsaBI GATNNNNATC 1 cut(s) 868
BsaJI CCNNGG 3 cut(s) 753, 1021, 1261
Bsc4I CCNNNNNNNGG 4 cut(s) 175, 295, 767, 1172
Bse1I ACTGG 4 cut(s) 11, 125, 165, 1800
Bse3DI GCAATG 2 cut(s) 999, 1353
Bse8I GATNNNNATC 1 cut(s) 868
BseBI CCWGG 3 cut(s) 600, 755, 1262
BseDI CCNNGG 3 cut(s) 753, 1021, 1261
BseGI GGATG 6 cut(s) 304, 355, 535, 611, 1236, 1435
BseJI GATNNNNATC 1 cut(s) 868
BseLI CCNNNNNNNGG 4 cut(s) 175, 295, 767, 1172
BseMI GCAATG 2 cut(s) 999, 1353
BseMII CTCAG 3 cut(s) 957, 1472, 2062
BseNI ACTGG 4 cut(s) 11, 125, 165, 1800
BseRI GAGGAG 2 cut(s) 44, 1600
BseSI GKGCMC 1 cut(s) 1165
BseXI GCAGC 2 cut(s) 28, 783
BshFI GGCC 2 cut(s) 859, 2159
BshNI GGYRCC 1 cut(s) 1162
BsiHKAI GWGCWC 2 cut(s) 236, 1037
BsiSI CCGG 3 cut(s) 346, 860, 2156
BslI CCNNNNNNNGG 4 cut(s) 175, 295, 767, 1172
BsmAI GTCTC 2 cut(s) 697, 1536
BsmBI CGTCTC 1 cut(s) 697
BsmI GAATGC 1 cut(s) 152
BsnI GGCC 2 cut(s) 859, 2159
Bsp1286I GDGCHC 4 cut(s) 236, 1037, 1165, 1268
Bsp1407I TGTACA 1 cut(s) 334
BspACI CCGC 1 cut(s) 431
BspANI GGCC 2 cut(s) 859, 2159
BspCNI CTCAG 3 cut(s) 956, 1471, 2061
BspHI TCATGA 1 cut(s) 1204
BspLI GGNNCC 3 cut(s) 759, 1164, 1762
BspMI ACCTGC 1 cut(s) 1218
BspOI GCTAGC 1 cut(s) 1484
BspPI GGATC 6 cut(s) 2, 124, 235, 871, 1059, 1499
BspT107I GGYRCC 1 cut(s) 1162
BspTI CTTAAG 1 cut(s) 563
BsrDI GCAATG 2 cut(s) 999, 1353
BsrGI TGTACA 1 cut(s) 334
BsrI ACTGG 4 cut(s) 11, 125, 165, 1800
BssECI CCNNGG 3 cut(s) 753, 1021, 1261
BssT1I CCWWGG 1 cut(s) 1021
Bst2UI CCWGG 3 cut(s) 600, 755, 1262
Bst4CI ACNGT 5 cut(s) 267, 1105, 1167, 1442, 2063
Bst6I CTCTTC 3 cut(s) 312, 1871, 1939
BstAFI CTTAAG 1 cut(s) 563
BstAPI GCANNNNNTGC 2 cut(s) 491, 1468
BstAUI TGTACA 1 cut(s) 334
BstBAI YACGTR 1 cut(s) 249
BstC8I GCNNGC 2 cut(s) 1374, 1482
BstDEI CTNAG 5 cut(s) 943, 1458, 1472, 2039, 2048
BstF5I GGATG 6 cut(s) 304, 355, 535, 611, 1236, 1435
BstMAI GTCTC 2 cut(s) 697, 1536
BstMWI GCNNNNNNNGC 4 cut(s) 491, 1468, 1477, 2044
BstNI CCWGG 3 cut(s) 600, 755, 1262
BstSCI CCNGG 5 cut(s) 345, 598, 753, 859, 1260
BstSFI CTRYAG 4 cut(s) 878, 1134, 1438, 1866
BstSLI GKGCMC 1 cut(s) 1165
BstV1I GCAGC 2 cut(s) 28, 783
BstV2I GAAGAC 3 cut(s) 413, 620, 1823
BstX2I RGATCY 3 cut(s) 240, 1051, 1504
BstXI CCANNNNNNTGG 1 cut(s) 1105
BstYI RGATCY 3 cut(s) 240, 1051, 1504
BsuRI GGCC 2 cut(s) 859, 2159
BtrI CACGTC 1 cut(s) 1873
BtsCI GGATG 6 cut(s) 304, 355, 535, 611, 1236, 1435
BtsI GCAGTG 1 cut(s) 1999
BtsIMutI CAGTG 7 cut(s) 132, 158, 974, 1110, 1447, 1999, 2059
BveI ACCTGC 1 cut(s) 1218
Cac8I GCNNGC 2 cut(s) 1374, 1482
CciI TCATGA 1 cut(s) 1204
Cfr13I GGNCC 4 cut(s) 712, 841, 1258, 2170
CseI GACGC 2 cut(s) 164, 722
Csp6I GTAC 6 cut(s) 268, 274, 335, 1435, 1686, 2136
CviAII CATG 8 cut(s) 214, 486, 1040, 1205, 1216, 1463, 1757, 1903
CviQI GTAC 6 cut(s) 268, 274, 335, 1435, 1686, 2136
DdeI CTNAG 5 cut(s) 943, 1458, 1472, 2039, 2048
DraI TTTAAA 1 cut(s) 1677
DraIII CACNNNGTG 1 cut(s) 1124
EaeI YGGCCR 1 cut(s) 857
Eam1104I CTCTTC 3 cut(s) 312, 1871, 1939
EarI CTCTTC 3 cut(s) 312, 1871, 1939
Ecl136II GAGCTC 1 cut(s) 1035
Eco130I CCWWGG 1 cut(s) 1021
Eco24I GRGCYC 2 cut(s) 1037, 1268
Eco32I GATATC 3 cut(s) 166, 1693, 1893
Eco47I GGWCC 4 cut(s) 712, 841, 1258, 2170
Eco53kI GAGCTC 1 cut(s) 1035
Eco57I CTGAAG 7 cut(s) 411, 569, 830, 1262, 1296, 1666, 1835
Eco72I CACGTG 1 cut(s) 249
EcoICRI GAGCTC 1 cut(s) 1035
EcoO109I RGGNCCY 1 cut(s) 2170
EcoRI GAATTC 1 cut(s) 748
EcoRII CCWGG 3 cut(s) 598, 753, 1260
EcoRV GATATC 3 cut(s) 166, 1693, 1893
EcoT14I CCWWGG 1 cut(s) 1021
EcoT22I ATGCAT 1 cut(s) 1957
EcoT38I GRGCYC 2 cut(s) 1037, 1268
ErhI CCWWGG 1 cut(s) 1021
Esp3I CGTCTC 1 cut(s) 697
FaeI CATG 8 cut(s) 217, 489, 1043, 1208, 1219, 1466, 1760, 1906
FalI AAGNNNNNCTT 2 cut(s) 2171, 2203
FatI CATG 8 cut(s) 213, 485, 1039, 1204, 1215, 1462, 1756, 1902
FauNDI CATATG 1 cut(s) 381
FbaI TGATCA 4 cut(s) 435, 1201, 1524, 2103
FblI GTMKAC 2 cut(s) 258, 1869
Fnu4HI GCNGC 2 cut(s) 42, 797
FokI GGATG 6 cut(s) 311, 362, 542, 618, 1223, 1442
FriOI GRGCYC 2 cut(s) 1037, 1268
Fsp4HI GCNGC 2 cut(s) 42, 797
GluI GCNGC 2 cut(s) 42, 797
GsuI CTGGAG 1 cut(s) 621
HaeIII GGCC 2 cut(s) 859, 2159
HapII CCGG 3 cut(s) 346, 860, 2156
HgaI GACGC 2 cut(s) 164, 722
Hin1II CATG 8 cut(s) 217, 489, 1043, 1208, 1219, 1466, 1760, 1906
HincII GTYRAC 2 cut(s) 737, 1393
HindII GTYRAC 2 cut(s) 737, 1393
HindIII AAGCTT 2 cut(s) 557, 1729
HpaI GTTAAC 1 cut(s) 1393
HpaII CCGG 3 cut(s) 346, 860, 2156
HphI GGTGA 4 cut(s) 445, 468, 934, 2047
Hpy166II GTNNAC 7 cut(s) 259, 545, 737, 1393, 1445, 1805, 1870
Hpy188I TCNGA 9 cut(s) 770, 810, 868, 1615, 1657, 1815, 1826, 2031, 2203
Hpy8I GTNNAC 7 cut(s) 259, 545, 737, 1393, 1445, 1805, 1870
Hpy99I CGWCG 1 cut(s) 158
HpyAV CCTTC 8 cut(s) 169, 179, 805, 1232, 1271, 1729, 1857, 1948
HpyCH4III ACNGT 5 cut(s) 267, 1105, 1167, 1442, 2063
HpyCH4IV ACGT 6 cut(s) 248, 255, 414, 690, 1872, 2150
HpyCH4V TGCA 9 cut(s) 150, 371, 494, 785, 799, 992, 1358, 1955, 1992
HpyF10VI GCNNNNNNNGC 4 cut(s) 491, 1468, 1477, 2044
HpyF3I CTNAG 5 cut(s) 943, 1458, 1472, 2039, 2048
HpySE526I ACGT 6 cut(s) 248, 255, 414, 690, 1872, 2150
Hsp92II CATG 8 cut(s) 217, 489, 1043, 1208, 1219, 1466, 1760, 1906
Ksp22I TGATCA 4 cut(s) 435, 1201, 1524, 2103
KspAI GTTAAC 1 cut(s) 1393
LmnI GCTCC 3 cut(s) 31, 217, 601
Lsp1109I GCAGC 2 cut(s) 28, 783
LweI GCATC 3 cut(s) 979, 1585, 2222
MaeII ACGT 6 cut(s) 248, 255, 414, 690, 1872, 2150
MaeIII GTNAC 6 cut(s) 922, 1402, 1453, 1747, 1781, 1994
MflI RGATCY 3 cut(s) 240, 1051, 1504
MhlI GDGCHC 4 cut(s) 236, 1037, 1165, 1268
MlyI GAGTC 2 cut(s) 107, 1888
MmeI TCCRAC 2 cut(s) 502, 1090
Mph1103I ATGCAT 1 cut(s) 1957
MroXI GAANNNNTTC 2 cut(s) 306, 1250
MseI TTAA 9 cut(s) 48, 564, 687, 1149, 1392, 1676, 2144, 2166, 2183
MslI CAYNNNNRTG 1 cut(s) 1103
MspCI CTTAAG 1 cut(s) 563
MspI CCGG 3 cut(s) 346, 860, 2156
MspR9I CCNGG 5 cut(s) 347, 600, 755, 861, 1262
Mva1269I GAATGC 1 cut(s) 152
MvaI CCWGG 3 cut(s) 600, 755, 1262
MwoI GCNNNNNNNGC 4 cut(s) 491, 1468, 1477, 2044
NciI CCSGG 2 cut(s) 347, 861
NdeI CATATG 1 cut(s) 381
NheI GCTAGC 1 cut(s) 1480
NlaIII CATG 8 cut(s) 217, 489, 1043, 1208, 1219, 1466, 1760, 1906
NlaIV GGNNCC 3 cut(s) 759, 1164, 1762
NmuCI GTSAC 4 cut(s) 922, 1453, 1747, 1994
NsiI ATGCAT 1 cut(s) 1957
PagI TCATGA 1 cut(s) 1204
PctI GAATGC 1 cut(s) 152
PdmI GAANNNNTTC 2 cut(s) 306, 1250
PfeI GAWTC 9 cut(s) 302, 469, 826, 869, 1010, 1190, 1287, 1343, 1861
PfoI TCCNGGA 1 cut(s) 598
PkrI GCNGC 2 cut(s) 43, 798
PleI GAGTC 2 cut(s) 107, 1887
PmaCI CACGTG 1 cut(s) 249
PmlI CACGTG 1 cut(s) 249
PpsI GAGTC 2 cut(s) 107, 1887
Ppu21I YACGTR 1 cut(s) 249
PpuMI RGGWCCY 1 cut(s) 2170
Psp124BI GAGCTC 1 cut(s) 1037
Psp1406I AACGTT 1 cut(s) 2150
Psp5II RGGWCCY 1 cut(s) 2170
Psp6I CCWGG 3 cut(s) 598, 753, 1260
PspCI CACGTG 1 cut(s) 249
PspGI CCWGG 3 cut(s) 598, 753, 1260
PspN4I GGNNCC 3 cut(s) 759, 1164, 1762
PspPI GGNCC 4 cut(s) 712, 841, 1258, 2170
PspPPI RGGWCCY 1 cut(s) 2170
PsuI RGATCY 3 cut(s) 240, 1051, 1504
RsaI GTAC 6 cut(s) 269, 275, 336, 1436, 1687, 2137
RsaNI GTAC 6 cut(s) 268, 274, 335, 1435, 1686, 2136
RseI CAYNNNNRTG 1 cut(s) 1103
SacI GAGCTC 1 cut(s) 1037
SaqAI TTAA 9 cut(s) 48, 564, 687, 1149, 1392, 1676, 2144, 2166, 2183
SatI GCNGC 2 cut(s) 42, 797
Sau96I GGNCC 4 cut(s) 712, 841, 1258, 2170
SchI GAGTC 2 cut(s) 107, 1888
ScrFI CCNGG 5 cut(s) 347, 600, 755, 861, 1262
SduI GDGCHC 4 cut(s) 236, 1037, 1165, 1268
SfaNI GCATC 3 cut(s) 979, 1585, 2222
SfcI CTRYAG 4 cut(s) 878, 1134, 1438, 1866
SinI GGWCC 4 cut(s) 712, 841, 1258, 2170
SmiMI CAYNNNNRTG 1 cut(s) 1103
SmlI CTYRAG 4 cut(s) 227, 563, 1586, 2119
SmoI CTYRAG 4 cut(s) 227, 563, 1586, 2119
SsiI CCGC 1 cut(s) 431
SstI GAGCTC 1 cut(s) 1037
StyD4I CCNGG 5 cut(s) 345, 598, 753, 859, 1260
StyI CCWWGG 1 cut(s) 1021
TaaI ACNGT 5 cut(s) 267, 1105, 1167, 1442, 2063
TaiI ACGT 6 cut(s) 251, 258, 417, 693, 1875, 2153
TaqI TCGA 5 cut(s) 15, 27, 1381, 1983, 2193
TaqII GACCGA 1 cut(s) 1580
TatI WGTACW 3 cut(s) 334, 1685, 2135
TfiI GAWTC 9 cut(s) 302, 469, 826, 869, 1010, 1190, 1287, 1343, 1861
Tru1I TTAA 9 cut(s) 48, 564, 687, 1149, 1392, 1676, 2144, 2166, 2183
Tru9I TTAA 9 cut(s) 48, 564, 687, 1149, 1392, 1676, 2144, 2166, 2183
TscAI CASTG 7 cut(s) 132, 165, 981, 1110, 1447, 1999, 2066
TseFI GTSAC 4 cut(s) 922, 1453, 1747, 1994
TseI GCWGC 2 cut(s) 41, 796
Tsp45I GTSAC 4 cut(s) 922, 1453, 1747, 1994
TspDTI ATGAA 9 cut(s) 218, 315, 461, 569, 761, 906, 1344, 1353, 1891
TspGWI ACGGA 1 cut(s) 819
TspRI CASTG 7 cut(s) 132, 165, 981, 1110, 1447, 1999, 2066
Vha464I CTTAAG 1 cut(s) 563
VpaK11BI GGWCC 4 cut(s) 712, 841, 1258, 2170
XapI RAATTY 8 cut(s) 454, 632, 662, 748, 915, 1709, 1836, 1944
XbaI TCTAGA 1 cut(s) 1966
XmaJI CCTAGG 1 cut(s) 1021
XmiI GTMKAC 2 cut(s) 258, 1869
XmnI GAANNNNTTC 2 cut(s) 306, 1250
Zsp2I ATGCAT 1 cut(s) 1957
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.