Rorug02G0466700
ERF Family

Belongs to the small GTPase superfamily. Arf family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
59812616 .. 59818743
6128 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0466700.1

Sequence Viewer

Length: 1833 bp
ATGGATCAACTTTTCTCGGCGAAACCTAAACCCTTCCGTATCCACAGAAAATCACCTATCGCTTCCAAGATCAAATCCTCCATCTCCGTCAAGCTCTCTGAATTTCTCGGTGATTACACTGACGACGTCTTCCTGGAGTATATTACAGTGCTGGTTTGTAATGGAAAGGATCAATATCAGGCAAGAGATGACTTAGAGGCATTTCTTGGTGAGAGGAGTGAAGAATTTGTATCATGGTTATGGGACCTTCTCTTCAAACATGCTGGAAAGTTTTGTAAGGATACTGACTATCTCGATGAAGTTCCTGGCATTAGTCCCCCAAACAGTGATAGCAGCATTGGTGCAAAAGTTGACAGGTGTACAGACTTCCAGAGCCATGTTAACAAACTTTTGCAGATGAGGGATGATAAAATGCGACATTCTGCTTGTGATCCTGCTTCCTGTAACGATATGAAGCTTGCTAAAGGTTCTCAACATTACCCCTCTGTCTCTGTCCCTTCAACTGAGGTGAATACCAGGGTAGCGTTGTCACATGGACGTAGAAATGAAATTCTGAGAAGATATATGGCAAGTGGAGATATTGATGGTGAGGGAGATCGAAGAACTCAGTCTAAAAATCAGATTACCCAGATTGTCAATCATAAATGCAGTGGATTGCCTAGAGAGCGGTTACATTTACCAGAAAGAGAGGCCATGGCTAAGAATACAGAATTGTCCGTATCAGGACGCCAATTTTCTGCACAGATTTGTGCCAGTAACAAGTTAGGAACTAGTCTGTCACAAAGATCTGTAGGTGCAGGATCCATACGTAGTAAAAAATCTCGGGGTAGTGTTTGGGATAGATTGGGCAAGCCATGTGAGGACATATCTGGGGGACTCAAGAGTGTTGATTTTTACGGTGCCGGGCATAACAAGCAATATGACAAAGTTAATCAGCTTGCATTAGTACTTCCGAAGAGGAATTCTGAAGTTCCTGCTTTTGATAAGAAGAGGTTGTACAGTAATCCTGTTGAGATGGAGAAACTGGAGCTTGTTGATAATGCAGTGAGTGAACCTCATTTTTCAAATAATATTGGGCGGAAGAGGCTCTTTGGTCAAATCAGTCCTGAATGCGAAGATACCTCACAGAATTTTAAGAAATCAGATGTGGCCACAAATGATTTGAAGACCATACAGGAATTGCTTCATGTGAAAGAAAAATTGAATCAAGTTGAAATCGAAATGTCAAAGCTTCGGTCAAAGCAGGTGGAGTTTGAAAAAAATGATGGGAAAACGAATCACTTGCTGAATTCTGGGGCACCGAAAGATTCAGAGGAAACTTTTGAGTCAAGAACTGTGTTGGTGACAAATGTACATTTTGCAGCAACTAGAGAAGCTTTGTCACTGTACTTTGCCAAGTGTGGAATGATTGTTAACGTAATGATCTTGACAGACACAGTGACTTCTAAGCCAAAAGGGTCTGCTTGTGTTACTTTCGCTAGCAAGGAGTCTGTTGACAAAGCAGTGGCATTGAGTGGGGCGACATTCTTTTGTAGGACCTTGAAGGTTCTAAGGATGGCAGGAGCAGCTGTGGAGGCATCAGCACCAACCCAGCTTCCCGAGATGACTTCCCTCAATATTCCACATGGCAATAGAATTGCTTTCCCCAGCAAACCACATTATATGAGGTCTACTCTGCAGTGGAGAAGAGAGCCTGGCGCTGTCCCATCAGAACTTCCATGCCCAGCTAGTGTTGGAGTTTCCTCTTCTGCCCACGAGCAACATATTTCTATTTCCAACAAAGACCGGAAGACATCATCATTAGAGCCCCATGAAGCAACCACAAGCACATAA

Protein Analysis

610

Amino Acids

67.76

Weight (kDa)

8.83

Isoelectric Point (pI)

47.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PWI PF01480 23 - 86 3.7e-07 PWI domain
RRM_1 PF00076 446 - 514 4.2e-12 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1234
AatII GACGTC 1 cut(s) 129
Acc36I ACCTGC 1 cut(s) 1234
AccB1I GGYRCC 2 cut(s) 899, 1297
AccBSI CCGCTC 1 cut(s) 667
AccI GTMKAC 1 cut(s) 1670
AciI CCGC 2 cut(s) 667, 1078
AclWI GGATC 5 cut(s) 12, 177, 425, 795, 808
AcoI YGGCCR 1 cut(s) 1149
AcsI RAATTY 6 cut(s) 101, 224, 549, 961, 1129, 1288
AcuI CTGAAG 1 cut(s) 987
AcyI GRCGYC 2 cut(s) 126, 727
AfaI GTAC 5 cut(s) 361, 948, 998, 1353, 1388
AgsI TTSAA 8 cut(s) 256, 501, 1065, 1165, 1204, 1214, 1256, 1543
AhlI ACTAGT 1 cut(s) 770
AjnI CCWGG 4 cut(s) 132, 304, 515, 1693
AluBI AGCT 9 cut(s) 94, 457, 937, 1030, 1231, 1376, 1568, 1594, 1727
AluI AGCT 9 cut(s) 94, 457, 937, 1030, 1231, 1376, 1568, 1594, 1727
Alw26I GTCTC 1 cut(s) 493
AlwI GGATC 5 cut(s) 12, 177, 425, 795, 808
Ama87I CYCGRG 2 cut(s) 822, 1598
AoxI GGCC 2 cut(s) 690, 1149
ApeKI GCWGC 3 cut(s) 333, 1361, 1565
ApoI RAATTY 6 cut(s) 101, 224, 549, 961, 1129, 1288
ArsI GACNNNNNNTTYG 2 cut(s) 1220, 1252
Asp700I GAANNNNTTC 1 cut(s) 1182
AspLEI GCGC 1 cut(s) 1700
AspS9I GGNCC 2 cut(s) 244, 1536
AsuC2I CCSGG 1 cut(s) 904
AsuHPI GGTGA 6 cut(s) 45, 122, 221, 520, 599, 1354
AsuNHI GCTAGC 1 cut(s) 1478
AvaI CYCGRG 2 cut(s) 822, 1598
AvaII GGWCC 2 cut(s) 244, 1536
BaeGI GKGCMC 1 cut(s) 1300
BalI TGGCCA 1 cut(s) 1151
BamHI GGATCC 1 cut(s) 800
BanI GGYRCC 2 cut(s) 899, 1297
BanII GRGCYC 1 cut(s) 1809
BarI GAAGNNNNNNTAC 2 cut(s) 980, 1012
BauI CACGAG 1 cut(s) 1754
BbsI GAAGAC 3 cut(s) 121, 1172, 1796
BbvI GCAGC 3 cut(s) 345, 1373, 1577
BccI CCATC 6 cut(s) 89, 578, 1009, 1259, 1549, 1714
BcgI CGANNNNNNTGC 2 cut(s) 1264, 1298
BciT130I CCWGG 4 cut(s) 134, 306, 517, 1695
BciVI GTATCC 2 cut(s) 50, 274
BcnI CCSGG 1 cut(s) 904
BcoDI GTCTC 1 cut(s) 493
BcuI ACTAGT 1 cut(s) 770
BfaI CTAG 5 cut(s) 660, 771, 1368, 1479, 1728
BfmI CTRYAG 2 cut(s) 789, 1676
BfoI RGCGCY 1 cut(s) 1701
BfuAI ACCTGC 1 cut(s) 1234
BfuI GTATCC 2 cut(s) 50, 274
BglII AGATCT 1 cut(s) 785
BisI GCNGC 3 cut(s) 334, 1362, 1566
BlsI GCNGC 3 cut(s) 335, 1363, 1567
BmcAI AGTACT 1 cut(s) 948
Bme1390I CCNGG 5 cut(s) 134, 306, 517, 904, 1695
Bme18I GGWCC 2 cut(s) 244, 1536
BmeT110I CYCGRG 2 cut(s) 822, 1598
BmgT120I GGNCC 2 cut(s) 244, 1536
BmiI GGNNCC 4 cut(s) 245, 802, 901, 1299
BmrFI CCNGG 5 cut(s) 134, 306, 517, 904, 1695
BmsI GCATC 1 cut(s) 1586
BmtI GCTAGC 1 cut(s) 1482
BpiI GAAGAC 3 cut(s) 121, 1172, 1796
BplI GAGNNNNNCTC 4 cut(s) 1039, 1071, 1657, 1689
BpmI CTGGAG 2 cut(s) 155, 1046
BpuEI CTTGAG 1 cut(s) 863
BpuMI CCSGG 1 cut(s) 904
BsaAI YACGTR 1 cut(s) 809
BsaBI GATNNNNATC 1 cut(s) 174
BsaHI GRCGYC 2 cut(s) 126, 727
BsaJI CCNNGG 2 cut(s) 516, 693
BsaWI WCCGGW 1 cut(s) 1785
BsaXI ACNNNNNCTCC 2 cut(s) 1554, 1584
Bse1I ACTGG 2 cut(s) 753, 1029
Bse8I GATNNNNATC 1 cut(s) 174
BseBI CCWGG 4 cut(s) 134, 306, 517, 1695
BseDI CCNNGG 2 cut(s) 516, 693
BseGI GGATG 2 cut(s) 409, 1560
BseJI GATNNNNATC 1 cut(s) 174
BseMII CTCAG 3 cut(s) 495, 545, 620
BseNI ACTGG 2 cut(s) 753, 1029
BseRI GAGGAG 1 cut(s) 229
BseSI GKGCMC 1 cut(s) 1300
BseXI GCAGC 3 cut(s) 345, 1373, 1577
BseYI CCCAGC 3 cut(s) 1590, 1646, 1723
BsgI GTGCAG 2 cut(s) 723, 816
BshFI GGCC 2 cut(s) 692, 1151
BshNI GGYRCC 2 cut(s) 899, 1297
BsiHKCI CYCGRG 2 cut(s) 822, 1598
BsiSI CCGG 2 cut(s) 903, 1786
BslFI GGGAC 5 cut(s) 257, 300, 479, 888, 1688
BsmAI GTCTC 1 cut(s) 493
BsmFI GGGAC 5 cut(s) 257, 300, 479, 888, 1688
BsmI GAATGC 1 cut(s) 1115
BsnI GGCC 2 cut(s) 692, 1151
BsoBI CYCGRG 2 cut(s) 822, 1598
Bsp1286I GDGCHC 2 cut(s) 1300, 1809
Bsp1407I TGTACA 3 cut(s) 359, 996, 1351
Bsp143I GATC 8 cut(s) 4, 69, 169, 430, 595, 785, 800, 1422
Bsp19I CCATGG 1 cut(s) 693
BspACI CCGC 2 cut(s) 667, 1078
BspANI GGCC 2 cut(s) 692, 1151
BspCNI CTCAG 3 cut(s) 496, 546, 619
BspLI GGNNCC 4 cut(s) 245, 802, 901, 1299
BspMAI CTGCAG 1 cut(s) 1680
BspMI ACCTGC 1 cut(s) 1234
BspOI GCTAGC 1 cut(s) 1482
BspPI GGATC 5 cut(s) 12, 177, 425, 795, 808
BspT107I GGYRCC 2 cut(s) 899, 1297
BsrBI CCGCTC 1 cut(s) 667
BsrGI TGTACA 3 cut(s) 359, 996, 1351
BsrI ACTGG 2 cut(s) 753, 1029
BssECI CCNNGG 2 cut(s) 516, 693
BssMI GATC 8 cut(s) 4, 69, 169, 430, 595, 785, 800, 1422
BssNI GRCGYC 2 cut(s) 126, 727
BssSI CACGAG 1 cut(s) 1754
BssT1I CCWWGG 1 cut(s) 693
Bst2BI CACGAG 1 cut(s) 1754
Bst2UI CCWGG 4 cut(s) 134, 306, 517, 1695
Bst4CI ACNGT 7 cut(s) 148, 326, 899, 1001, 1336, 1386, 1438
Bst6I CTCTTC 6 cut(s) 257, 950, 983, 1076, 1681, 1750
BstACI GRCGYC 2 cut(s) 126, 727
BstAUI TGTACA 3 cut(s) 359, 996, 1351
BstBAI YACGTR 1 cut(s) 809
BstC8I GCNNGC 4 cut(s) 459, 851, 939, 1480
BstDEI CTNAG 7 cut(s) 193, 504, 554, 606, 699, 1446, 1550
BstDSI CCRYGG 1 cut(s) 693
BstF5I GGATG 2 cut(s) 409, 1560
BstH2I RGCGCY 1 cut(s) 1701
BstHHI GCGC 1 cut(s) 1700
BstKTI GATC 8 cut(s) 7, 72, 172, 433, 598, 788, 803, 1425
BstMAI GTCTC 1 cut(s) 493
BstMBI GATC 8 cut(s) 4, 69, 169, 430, 595, 785, 800, 1422
BstMWI GCNNNNNNNGC 5 cut(s) 664, 913, 1084, 1565, 1574
BstNI CCWGG 4 cut(s) 134, 306, 517, 1695
BstNSI RCATGY 1 cut(s) 263
BstSCI CCNGG 5 cut(s) 132, 304, 515, 902, 1693
BstSFI CTRYAG 2 cut(s) 789, 1676
BstSLI GKGCMC 1 cut(s) 1300
BstSNI TACGTA 1 cut(s) 809
BstV1I GCAGC 3 cut(s) 345, 1373, 1577
BstV2I GAAGAC 3 cut(s) 121, 1172, 1796
BstX2I RGATCY 2 cut(s) 785, 800
BstYI RGATCY 2 cut(s) 785, 800
BsuI GTATCC 2 cut(s) 50, 274
BsuRI GGCC 2 cut(s) 692, 1151
BtgI CCRYGG 1 cut(s) 693
BtsCI GGATG 2 cut(s) 409, 1560
BtsI GCAGTG 4 cut(s) 655, 1050, 1509, 1685
BtsIMutI CAGTG 9 cut(s) 117, 153, 331, 655, 1050, 1382, 1443, 1509, 1685
BveI ACCTGC 1 cut(s) 1234
Cac8I GCNNGC 4 cut(s) 459, 851, 939, 1480
CfoI GCGC 1 cut(s) 1700
Cfr13I GGNCC 2 cut(s) 244, 1536
CseI GACGC 1 cut(s) 735
Csp6I GTAC 5 cut(s) 360, 947, 997, 1352, 1387
CspCI CAANNNNNGTGG 2 cut(s) 1227, 1262
CviQI GTAC 5 cut(s) 360, 947, 997, 1352, 1387
DdeI CTNAG 7 cut(s) 193, 504, 554, 606, 699, 1446, 1550
DpnI GATC 8 cut(s) 6, 71, 171, 432, 597, 787, 802, 1424
DpnII GATC 8 cut(s) 4, 69, 169, 430, 595, 785, 800, 1422
EaeI YGGCCR 1 cut(s) 1149
Eam1104I CTCTTC 6 cut(s) 257, 950, 983, 1076, 1681, 1750
EarI CTCTTC 6 cut(s) 257, 950, 983, 1076, 1681, 1750
EciI GGCGGA 1 cut(s) 1093
Eco105I TACGTA 1 cut(s) 809
Eco130I CCWWGG 1 cut(s) 693
Eco24I GRGCYC 1 cut(s) 1809
Eco47I GGWCC 2 cut(s) 244, 1536
Eco57I CTGAAG 1 cut(s) 987
Eco88I CYCGRG 2 cut(s) 822, 1598
EcoO109I RGGNCCY 2 cut(s) 244, 1536
EcoRI GAATTC 2 cut(s) 961, 1288
EcoRII CCWGG 4 cut(s) 132, 304, 515, 1693
EcoT14I CCWWGG 1 cut(s) 693
EcoT38I GRGCYC 1 cut(s) 1809
ErhI CCWWGG 1 cut(s) 693
FalI AAGNNNNNCTT 2 cut(s) 1073, 1105
FaqI GGGAC 5 cut(s) 257, 300, 479, 888, 1688
FblI GTMKAC 1 cut(s) 1670
Fnu4HI GCNGC 3 cut(s) 334, 1362, 1566
FokI GGATG 2 cut(s) 416, 1567
FriOI GRGCYC 1 cut(s) 1809
Fsp4HI GCNGC 3 cut(s) 334, 1362, 1566
FspBI CTAG 5 cut(s) 660, 771, 1368, 1479, 1728
GlaI GCGC 1 cut(s) 1699
GluI GCNGC 3 cut(s) 334, 1362, 1566
GsaI CCCAGC 3 cut(s) 1594, 1650, 1727
GsuI CTGGAG 2 cut(s) 155, 1046
HaeII RGCGCY 1 cut(s) 1701
HaeIII GGCC 2 cut(s) 692, 1151
HapII CCGG 2 cut(s) 903, 1786
HgaI GACGC 1 cut(s) 735
HhaI GCGC 1 cut(s) 1700
Hin1I GRCGYC 2 cut(s) 126, 727
Hin6I GCGC 1 cut(s) 1698
HinP1I GCGC 1 cut(s) 1698
HincII GTYRAC 4 cut(s) 352, 382, 1414, 1495
HindII GTYRAC 4 cut(s) 352, 382, 1414, 1495
HindIII AAGCTT 3 cut(s) 455, 1229, 1374
HinfI GANTC 6 cut(s) 876, 1204, 1276, 1307, 1325, 1487
HpaI GTTAAC 2 cut(s) 382, 1414
HpaII CCGG 2 cut(s) 903, 1786
HphI GGTGA 6 cut(s) 45, 122, 221, 520, 599, 1354
Hpy166II GTNNAC 7 cut(s) 352, 360, 382, 1052, 1414, 1495, 1671
Hpy188I TCNGA 8 cut(s) 100, 555, 621, 954, 967, 1144, 1312, 1711
Hpy188III TCNNGA 8 cut(s) 293, 370, 723, 880, 1106, 1329, 1426, 1598
Hpy8I GTNNAC 7 cut(s) 352, 360, 382, 1052, 1414, 1495, 1671
Hpy99I CGWCG 1 cut(s) 128
HpyAV CCTTC 4 cut(s) 43, 257, 507, 1537
HpyCH4III ACNGT 7 cut(s) 148, 326, 899, 1001, 1336, 1386, 1438
HpyCH4IV ACGT 4 cut(s) 126, 538, 808, 1416
HpyCH4V TGCA 9 cut(s) 344, 394, 648, 740, 797, 941, 1043, 1361, 1678
HpyF10VI GCNNNNNNNGC 5 cut(s) 664, 913, 1084, 1565, 1574
HpyF3I CTNAG 7 cut(s) 193, 504, 554, 606, 699, 1446, 1550
HpySE526I ACGT 4 cut(s) 126, 538, 808, 1416
Hsp92I GRCGYC 2 cut(s) 126, 727
HspAI GCGC 1 cut(s) 1698
KspAI GTTAAC 2 cut(s) 382, 1414
Kzo9I GATC 8 cut(s) 4, 69, 169, 430, 595, 785, 800, 1422
LmnI GCTCC 2 cut(s) 1027, 1562
Lsp1109I GCAGC 3 cut(s) 345, 1373, 1577
LweI GCATC 1 cut(s) 1586
MaeI CTAG 5 cut(s) 660, 771, 1368, 1479, 1728
MaeII ACGT 4 cut(s) 126, 538, 808, 1416
MaeIII GTNAC 9 cut(s) 443, 528, 669, 755, 777, 1342, 1380, 1438, 1468
MalI GATC 8 cut(s) 6, 71, 171, 432, 597, 787, 802, 1424
MbiI CCGCTC 1 cut(s) 667
MboI GATC 8 cut(s) 4, 69, 169, 430, 595, 785, 800, 1422
MflI RGATCY 2 cut(s) 785, 800
MhlI GDGCHC 2 cut(s) 1300, 1809
MlsI TGGCCA 1 cut(s) 1151
MluNI TGGCCA 1 cut(s) 1151
MlyI GAGTC 3 cut(s) 870, 1334, 1496
MmeI TCCRAC 2 cut(s) 1714, 1800
Mox20I TGGCCA 1 cut(s) 1151
MroXI GAANNNNTTC 1 cut(s) 1182
MscI TGGCCA 1 cut(s) 1151
MseI TTAA 4 cut(s) 381, 930, 1134, 1413
MslI CAYNNNNRTG 1 cut(s) 238
Msp20I TGGCCA 1 cut(s) 1151
MspA1I CMGCKG 1 cut(s) 1568
MspI CCGG 2 cut(s) 903, 1786
MspR9I CCNGG 5 cut(s) 134, 306, 517, 904, 1695
Mva1269I GAATGC 1 cut(s) 1115
MvaI CCWGG 4 cut(s) 134, 306, 517, 1695
MwoI GCNNNNNNNGC 5 cut(s) 664, 913, 1084, 1565, 1574
NciI CCSGG 1 cut(s) 904
NcoI CCATGG 1 cut(s) 693
NdeII GATC 8 cut(s) 4, 69, 169, 430, 595, 785, 800, 1422
NheI GCTAGC 1 cut(s) 1478
NlaIV GGNNCC 4 cut(s) 245, 802, 901, 1299
NmuCI GTSAC 5 cut(s) 528, 777, 1342, 1380, 1438
NspI RCATGY 1 cut(s) 263
PaqCI CACCTGC 1 cut(s) 1234
PctI GAATGC 1 cut(s) 1115
PdmI GAANNNNTTC 1 cut(s) 1182
PfeI GAWTC 3 cut(s) 1204, 1276, 1307
PflFI GACNNNGTC 1 cut(s) 125
PfoI TCCNGGA 1 cut(s) 132
PkrI GCNGC 3 cut(s) 335, 1363, 1567
PleI GAGTC 3 cut(s) 870, 1333, 1495
PpsI GAGTC 3 cut(s) 870, 1333, 1495
Ppu21I YACGTR 1 cut(s) 809
PpuMI RGGWCCY 2 cut(s) 244, 1536
Psp5II RGGWCCY 2 cut(s) 244, 1536
Psp6I CCWGG 4 cut(s) 132, 304, 515, 1693
PspFI CCCAGC 3 cut(s) 1590, 1646, 1723
PspGI CCWGG 4 cut(s) 132, 304, 515, 1693
PspN4I GGNNCC 4 cut(s) 245, 802, 901, 1299
PspPI GGNCC 2 cut(s) 244, 1536
PspPPI RGGWCCY 2 cut(s) 244, 1536
PstI CTGCAG 1 cut(s) 1680
PsuI RGATCY 2 cut(s) 785, 800
PsyI GACNNNGTC 1 cut(s) 125
PvuII CAGCTG 1 cut(s) 1568
RsaI GTAC 5 cut(s) 361, 948, 998, 1353, 1388
RsaNI GTAC 5 cut(s) 360, 947, 997, 1352, 1387
RseI CAYNNNNRTG 1 cut(s) 238
SaqAI TTAA 4 cut(s) 381, 930, 1134, 1413
SatI GCNGC 3 cut(s) 334, 1362, 1566
Sau3AI GATC 8 cut(s) 4, 69, 169, 430, 595, 785, 800, 1422
Sau96I GGNCC 2 cut(s) 244, 1536
ScaI AGTACT 1 cut(s) 948
SchI GAGTC 3 cut(s) 870, 1334, 1496
ScrFI CCNGG 5 cut(s) 134, 306, 517, 904, 1695
SduI GDGCHC 2 cut(s) 1300, 1809
SfaNI GCATC 1 cut(s) 1586
SfcI CTRYAG 2 cut(s) 789, 1676
SinI GGWCC 2 cut(s) 244, 1536
SmiMI CAYNNNNRTG 1 cut(s) 238
SmlI CTYRAG 1 cut(s) 878
SmoI CTYRAG 1 cut(s) 878
SnaBI TACGTA 1 cut(s) 809
SpeI ACTAGT 1 cut(s) 770
SsiI CCGC 2 cut(s) 667, 1078
SspI AATATT 2 cut(s) 1072, 1618
SspMI CTAG 5 cut(s) 660, 771, 1368, 1479, 1728
StyD4I CCNGG 5 cut(s) 132, 304, 515, 902, 1693
StyI CCWWGG 1 cut(s) 693
TaaI ACNGT 7 cut(s) 148, 326, 899, 1001, 1336, 1386, 1438
TaiI ACGT 4 cut(s) 129, 541, 811, 1419
TaqI TCGA 3 cut(s) 294, 598, 1218
TaqII GACCGA 1 cut(s) 1224
TatI WGTACW 5 cut(s) 359, 946, 996, 1351, 1386
TfiI GAWTC 3 cut(s) 1204, 1276, 1307
Tru1I TTAA 4 cut(s) 381, 930, 1134, 1413
Tru9I TTAA 4 cut(s) 381, 930, 1134, 1413
TscAI CASTG 9 cut(s) 124, 153, 331, 655, 1050, 1389, 1443, 1509, 1685
TseFI GTSAC 5 cut(s) 528, 777, 1342, 1380, 1438
TseI GCWGC 3 cut(s) 333, 1361, 1565
Tsp45I GTSAC 5 cut(s) 528, 777, 1342, 1380, 1438
TspDTI ATGAA 5 cut(s) 312, 467, 561, 1175, 1827
TspGWI ACGGA 3 cut(s) 26, 76, 706
TspRI CASTG 9 cut(s) 124, 153, 331, 655, 1050, 1389, 1443, 1509, 1685
Tth111I GACNNNGTC 1 cut(s) 125
VpaK11BI GGWCC 2 cut(s) 244, 1536
XapI RAATTY 6 cut(s) 101, 224, 549, 961, 1129, 1288
XceI RCATGY 1 cut(s) 263
XmiI GTMKAC 1 cut(s) 1670
XmnI GAANNNNTTC 1 cut(s) 1182
XspI CTAG 5 cut(s) 660, 771, 1368, 1479, 1728
ZraI GACGTC 1 cut(s) 127
ZrmI AGTACT 1 cut(s) 948
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.