Rh2BG179000

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0000039
Physical Location & Seq
Forward (+)
15891045 .. 15898155
7111 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG179000.1

Sequence Viewer

Length: 3939 bp
ATGAAGGTGAAGCTACTGGAGGATGGGTTTACGAAGATTGTTGTGTGGGGTGTTGGAGGAGTCGGGAAGACCACATTGGTGAAAATGTTGTGTCATGATCAGGAAGTCAAAGATAAATTCAAGAAAATCTTCTTTACCACTGCTTCAAAATGGCAGAACCTGAACCTCATTATGCAAGAACTATATCAAGTCCTGTGTTCCCAGGTTCCTACTTTCCAAAACAAAGAAGGGAGGCGTTATCTGGTTGTCCTGGATGATGTTGGGGATGGATCAGAATCCATTCTTCCGGAGTTTGATGGATTGAAAATTCCAAATAGCAAGATTTTGATTACATCAAGATATGCATTTCCAGGAGTTGGTTCTCAATACCATTTGAAATCTCTGAATGATGAGGATGCAATGTCTCTTTTTCATCACTCAGCATCATTGGGAGATCAGTGCTCTTATATTCCAGAAGATCTTTTGAGAAAGATAGTAGAGTGTTGTAAGGGACTTCCACTTGCAATCACTGTGAACGGAAGATCACTTTGCGGGCAACCTATTGAAATCTGGCAAAAGAGAATAGTAGAATGGGGGAGAGGTTCTTCTATTTTTGATACAGAACCAGAAATGATTGTTTGCCTCCAAAGAAGCTTGGATGCCTTACATAGAGAAAAGACTATCATCAAAGAATGTTTTGTAGACCTTGCTTCATTTCCTGAAGACCAAGTAATCCCTGCTGCTGCCCTCATTGATATGTGGGCAGAATTATATGGACTAGATGAAGAGTATTGGTCCATTGCAAACCTCCAGAAGCTCACCATCCGCGGATTTGCCAATATTGTCTCAAGGGAGGAGGAGATGGAGGTGGATGGCTATTACAGTGATCTCTTTGTTACCCTGCATCATATGCTTAGAGGGCTGGCAATCCATGAGGCTAGTGAGGACACAATAGAACAGAGAAATAGACTGATTATAGACATACATGGAGACAATCTTCCTAGCTGGTGGGCAGAACAGAAGTATCAGCCTAGGAATGCTCGTCTACTATCTGTCTCAACTGATCGAGCGTTCTCAAGAAAATGGCACTACATGCAAGTACCAAAAGTTGAGGTTCTAGTTTTGAACTTCCAGACTGAGAAATATGAGTTACCTGATTTTCTGGATAAAATAGACAAATTAAAGGTTCTAGTAGTCACAAACTATGGCTCCTCGTCTGCTCAGTTAAGTAACTTTCAACTGGTAGGCTCATTGCGAAATCTGAAAAGAATCAGATTAGAGGGAGTTTCGATTACTTCCATAACCAAGAACCCCATACAACTGGATAGTCTAAAGAAGATAGCTTTTACCAAGTGTGACATGGGTCAAGCTTTTAGCAACTCTTCCTTTCAATTTTCTGTAGCATTTCCAAATCTAGTGGAGATGTATGTCGAGCATTGCCACGATTTGAAGGAATTGCCTGCTGACCTTGGTAATCTTTCCCACCTAGAGACACTCTCTATCTCCAATTGCCATAGGCTGTCCACCTTGCCTGAAGGGATTGGAAATCTGAGCAAGTTGAAAAGGTTGAGGGTTAGGTATGGTACAAACTTGGTAAAGTTTCCAGGATCAATTAGGAAGCTCAATAGCTTAGAGTTTCTTGACATATCTGGTTGCATCAAAATCATGGGTTTCCCTGAGGACATTGGTGAAATGAGCAGATTAAGAAAGCTGAACATAAGTGGTTGCTCAAGATTGAAAGAGCTGCCACTGTCTGTTTTGAGTCTTGAGCAGTTACAGGAAGTGATAATGGATGAAGAGACAGAAAAGTCATGGAATCCTTTCCTACTCAAAAACATAGACACAAGGGTGGTTCCTCCGCTTTCAGTTGGATTTGATGTGGCTTTGGAGGAGTTGAACTGTCAGGTACTCAAGGATAGGATGTCCAGACGTGTCGAGTGTGGTATAGCACAAAATAAAATTCAAACCGAAGGTTGGTGTCCTGTACCTGTGCCTTCTTCGCTCACTATGGGATTAGATGTCCTCGACGTGTGGGGAGCAATGAAGATGGATGAGAAATTGACTTCAGAAGTGAGGGTCAAGCAAATTGAAGGGAGTGATGTGGTGAAAAAACAACTTGGAATTAAAGGGATATCCGGGAATCACAGCAGGAACAACATAGTTTCCAATGCGAGCAGCAGTGCAGGAGGAAGTCAATTGTTGAAGGCAGCAGAGACAGATGAGTCGCAGACTGATGAGCAAAGTTTGGAGACATTTGTCTTAAGACGTTTCAATTTTGAAGAGTTGAATGTTGCTACTGGGAATTTCAGGTCAGATGGAATAATTGGTAGGGGGCCCTTTGGTAACATTTTCAAGGGTTGGGTGGATGAGAAGACGCTTGCACCTTCTAAGGTTGGCTCTGGAATGCCTGTTGCTGTCAAGAAACTGAATCCAGAAAGAGTGCTAGATTTTGAAGAGTGGCAGAATTTTCATTTCTATGAAGGGAGCCCTGGCATTGAAACACTACCTTGGAACTACAGACTCGATGCAGCTTTTGGCATGGAACCCCTATCTTGGAACAAAAGACTGGATATAGCTTCTGGAGTAGCTCAAGCCCTAGCCTACTTGCATACTTTTTCACCTAATCAAATTGTCCACAGTGACCTTAAGGCCTCAAATATCTTGCTTGATAGGAATTACAATGCAAAACTCTCAAATTTTGGATTAGAAAGACTTGGGAAAACTGGTGAACTGTCACATCAATCAACTCGCTTTGTAGGAACATCTCTTTATATTGATCCAAAGGAAATTACAACAGGTCATTCTTATGTAAAGAGCGATGTTTATAGGTTTGGTGTTACACTACTTCAGTTGCTGACAGGGTTAAAGACCACTGATAGAAATCGTCCCAGCGAACGGCAAAATCTGGGGTTAAAGACCACTGATAGAAATTGTCCCAGCGAACGGCAAAATCTGGTTGAATGGGGTAAACCACTACTCTTGAATGAGAGAAATTTGAAAACCATCATGGACGTGCGGATAGAGGGCCAATATTCCTCCAAGGCAGCATTTCAAGCAGCACAACTTACTCTAAAATGCCTAGCATTGGATCCCAAAAGCCGACCTTCCACGACAGAAGTTGTGGAAGAACTGGAACAAATTCAGGCAATAGAGGAAAGAACTTTAAACACCAGTATGCCCAGCAGTGAGTGCCGGAGGAACATAGATTCGAACACTAGCAGTGGCGGAGGAACAAGTGTATTCTCGGAGGGAAAAACATCAACATTTCAAAGCAAAGATGATGATCAGTCAATTGATGGCCATATTTCAGAGACATCCAACTTGAGAGTTTTCAGTTTTGCAGAGTTGAAGACTGCTACAAGGAATTTCAGGGCAGACACAATGCTTGGTGAGGGAGGTTTTGGGATTGTATTCAAGGGCTGGTTGGATGAAACGTCGGTTTCACCTTCTAAAGCTGGCACTGGAATGATGATTGCTATCAAGAAACTGAAAGCAGAAAGTTTTCAAGGCTTTAAAGAGTGGCAGGCAGAGGTGAACTTTGTAGGAAGGCTTTCTCATCCCAACCTTGTGAAGCTGTTGGGATACTGTTGGGAAGATAAGGAGTTACTCCTTGTTTATGAGTTCATGAGCAGAGGAAGCTTGGAGAATCATCTTTTCAGACGGTTACGAGCACTCGATACTAAACGCCCCAAGGAACAACTTAATCTGGTAAGCTGGGCTAATCCACTTCTTTCAAATAAAAGATATTTGAAAACCATCATCGATGGGCAGATGGAAGGCCAATATTCCTTCAAAGCAGCATCAAAGGCAGGACAGATTACTCTAAAATGTCTAGCACGAGATCCTAAAAACCGACCTTCCATGAAAGAAGTTGTGGAGGAACTGGAACAGATTCAGGCAATCGAGGAAAAACTTACGGCAACAGATTCAAGCAACTCCCATTTAGGTATGGTGTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
NB-ARC RPW8

Protein Analysis

1312

Amino Acids

147.73

Weight (kDa)

6.38

Isoelectric Point (pI)

40.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 4 - 140 3.5e-10 NB-ARC domain
LRR_RPS2 PF23247 453 - 589 7e-06 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_14 PF23598 475 - 571 6.4e-15 Leucine-rich repeat region
PK_Tyr_Ser-Thr PF07714 842 - 1037 2.8e-16 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 850 - 1035 2.9e-21 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 1119 - 1230 2.5e-16 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 1119 - 1214 4.5e-10 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 1786, 2200
AccB7I CCANNNNNTGG 1 cut(s) 356
AccI GTMKAC 2 cut(s) 681, 1024
AccII CGCG 1 cut(s) 807
AccIII TCCGGA 1 cut(s) 286
AciI CCGC 6 cut(s) 531, 805, 807, 1838, 2995, 3204
AclWI GGATC 6 cut(s) 277, 1594, 2750, 3062, 3075, 3815
AcoI YGGCCR 1 cut(s) 3277
AcsI RAATTY 9 cut(s) 116, 306, 1938, 2281, 2443, 2674, 2971, 3117, 3343
AcuI CTGAAG 4 cut(s) 720, 1533, 2028, 2810
AfaI GTAC 4 cut(s) 1080, 1564, 1887, 1965
AfiI CCNNNNNNNGG 6 cut(s) 356, 1953, 2532, 2874, 2922, 3064
AflII CTTAAG 2 cut(s) 2239, 2624
AflIII ACRYGT 2 cut(s) 1909, 2007
AjiI CACGTC 3 cut(s) 1910, 2008, 2992
AjnI CCWGG 5 cut(s) 201, 249, 349, 1582, 2467
AjuI GAANNNNNNNTTGG 2 cut(s) 59, 91
AleI CACNNNNGTG 2 cut(s) 77, 1826
Alw21I GWGCWC 2 cut(s) 443, 3652
Alw26I GTCTC 9 cut(s) 408, 829, 963, 1039, 1463, 1772, 2186, 2222, 3284
AlwI GGATC 6 cut(s) 277, 1594, 2750, 3062, 3075, 3815
AlwNI CAGNNNCTG 2 cut(s) 160, 2833
Aor13HI TCCGGA 1 cut(s) 286
AoxI GGCC 5 cut(s) 2312, 2628, 3004, 3277, 3757
ApaI GGGCCC 1 cut(s) 2316
ApeKI GCWGC 9 cut(s) 719, 722, 1723, 2154, 2186, 2507, 3023, 3035, 3776
ApoI RAATTY 9 cut(s) 116, 306, 1938, 2281, 2443, 2674, 2971, 3117, 3343
Asp700I GAANNNNTTC 7 cut(s) 128, 279, 1799, 3117, 3480, 3529, 3870
AspA2I CCTAGG 1 cut(s) 1010
AspS9I GGNCC 4 cut(s) 774, 2312, 2313, 3004
AsuC2I CCSGG 1 cut(s) 2116
AsuII TTCGAA 1 cut(s) 3188
AvaII GGWCC 1 cut(s) 774
AvrII CCTAGG 1 cut(s) 1010
AxyI CCTNAGG 1 cut(s) 1656
BaeGI GKGCMC 1 cut(s) 2316
BaeI ACNNNNGTAYC 2 cut(s) 986, 1019
BalI TGGCCA 1 cut(s) 3279
BamHI GGATCC 1 cut(s) 3067
BanII GRGCYC 2 cut(s) 2316, 2468
BauI CACGAG 1 cut(s) 3816
BbsI GAAGAC 4 cut(s) 74, 708, 2357, 3335
Bbv12I GWGCWC 2 cut(s) 443, 3652
BbvI GCAGC 9 cut(s) 706, 709, 1710, 2166, 2198, 2519, 3035, 3047, 3788
BceAI ACGGC 3 cut(s) 2891, 2939, 3912
BciT130I CCWGG 5 cut(s) 203, 251, 351, 1584, 2469
BciVI GTATCC 1 cut(s) 3554
BclI TGATCA 2 cut(s) 97, 3262
BcnI CCSGG 1 cut(s) 2116
BcoDI GTCTC 9 cut(s) 408, 829, 963, 1039, 1463, 1772, 2186, 2222, 3284
BfmI CTRYAG 2 cut(s) 1377, 2494
BfrI CTTAAG 2 cut(s) 2239, 2624
BfuI GTATCC 1 cut(s) 3554
BglII AGATCT 1 cut(s) 457
BisI GCNGC 9 cut(s) 720, 723, 1724, 2155, 2187, 2508, 3024, 3036, 3777
BlnI CCTAGG 1 cut(s) 1010
BlsI GCNGC 9 cut(s) 721, 724, 1725, 2156, 2188, 2509, 3025, 3037, 3778
Bme1390I CCNGG 6 cut(s) 203, 251, 351, 1584, 2116, 2469
Bme18I GGWCC 1 cut(s) 774
BmgBI CACGTC 3 cut(s) 1910, 2008, 2992
BmgT120I GGNCC 4 cut(s) 774, 2312, 2313, 3004
BmiI GGNNCC 8 cut(s) 207, 1189, 1833, 2313, 2314, 2465, 2523, 3069
BmrFI CCNGG 6 cut(s) 203, 251, 351, 1584, 2116, 2469
BmrI ACTGGG 1 cut(s) 2286
BmsI GCATC 7 cut(s) 385, 431, 628, 892, 1644, 2494, 3788
BmuI ACTGGG 1 cut(s) 2286
BoxI GACNNNNGTC 2 cut(s) 1341, 2234
BpiI GAAGAC 4 cut(s) 74, 708, 2357, 3335
BplI GAGNNNNNCTC 2 cut(s) 1460, 1492
BpmI CTGGAG 3 cut(s) 38, 773, 2580
Bpu14I TTCGAA 1 cut(s) 3188
BpuEI CTTGAG 7 cut(s) 811, 1039, 1693, 1766, 1874, 2553, 3322
BpuMI CCSGG 1 cut(s) 2116
Bsa29I ATCGAT 1 cut(s) 3741
BsaBI GATNNNNATC 4 cut(s) 274, 2859, 3261, 3455
BsaJI CCNNGG 8 cut(s) 201, 805, 1010, 1447, 2467, 2486, 3018, 3669
BsaWI WCCGGW 1 cut(s) 286
BsaXI ACNNNNNCTCC 4 cut(s) 11, 41, 1172, 1202
Bsc4I CCNNNNNNNGG 6 cut(s) 356, 1953, 2532, 2874, 2922, 3064
Bse21I CCTNAGG 1 cut(s) 1656
Bse3DI GCAATG 5 cut(s) 405, 777, 1229, 1414, 2025
Bse8I GATNNNNATC 4 cut(s) 274, 2859, 3261, 3455
BseAI TCCGGA 1 cut(s) 286
BseBI CCWGG 5 cut(s) 203, 251, 351, 1584, 2469
BseCI ATCGAT 1 cut(s) 3741
BseDI CCNNGG 8 cut(s) 201, 805, 1010, 1447, 2467, 2486, 3018, 3669
BseJI GATNNNNATC 4 cut(s) 274, 2859, 3261, 3455
BseLI CCNNNNNNNGG 6 cut(s) 356, 1953, 2532, 2874, 2922, 3064
BseMI GCAATG 5 cut(s) 405, 777, 1229, 1414, 2025
BseMII CTCAG 5 cut(s) 432, 1107, 1214, 1520, 1647
BseRI GAGGAG 5 cut(s) 72, 848, 851, 1180, 1883
BseSI GKGCMC 1 cut(s) 2316
BseXI GCAGC 9 cut(s) 706, 709, 1710, 2166, 2198, 2519, 3035, 3047, 3788
BseYI CCCAGC 4 cut(s) 2867, 2915, 3158, 3693
BsgI GTGCAG 1 cut(s) 2181
Bsh1236I CGCG 1 cut(s) 807
BshFI GGCC 5 cut(s) 2314, 2630, 3006, 3279, 3759
BshVI ATCGAT 1 cut(s) 3741
BsiHKAI GWGCWC 2 cut(s) 443, 3652
BsiSI CCGG 3 cut(s) 287, 2115, 3172
BslFI GGGAC 3 cut(s) 504, 2850, 2898
BslI CCNNNNNNNGG 6 cut(s) 356, 1953, 2532, 2874, 2922, 3064
BsmAI GTCTC 9 cut(s) 408, 829, 963, 1039, 1463, 1772, 2186, 2222, 3284
BsmFI GGGAC 3 cut(s) 504, 2850, 2898
BsmI GAATGC 2 cut(s) 1021, 2388
BsnI GGCC 5 cut(s) 2314, 2630, 3006, 3279, 3759
Bsp119I TTCGAA 1 cut(s) 3188
Bsp120I GGGCCC 1 cut(s) 2312
Bsp1286I GDGCHC 4 cut(s) 443, 2316, 2468, 3652
Bsp13I TCCGGA 1 cut(s) 286
BspACI CCGC 6 cut(s) 531, 805, 807, 1838, 2995, 3204
BspANI GGCC 5 cut(s) 2314, 2630, 3006, 3279, 3759
BspCNI CTCAG 5 cut(s) 431, 1108, 1213, 1521, 1648
BspDI ATCGAT 1 cut(s) 3741
BspEI TCCGGA 1 cut(s) 286
BspFNI CGCG 1 cut(s) 807
BspHI TCATGA 3 cut(s) 94, 3603, 3935
BspLI GGNNCC 8 cut(s) 207, 1189, 1833, 2313, 2314, 2465, 2523, 3069
BspPI GGATC 6 cut(s) 277, 1594, 2750, 3062, 3075, 3815
BspT104I TTCGAA 1 cut(s) 3188
BspTI CTTAAG 2 cut(s) 2239, 2624
BsrDI GCAATG 5 cut(s) 405, 777, 1229, 1414, 2025
BssECI CCNNGG 8 cut(s) 201, 805, 1010, 1447, 2467, 2486, 3018, 3669
BssSI CACGAG 1 cut(s) 3816
BssT1I CCWWGG 5 cut(s) 1010, 1447, 2486, 3018, 3669
Bst2BI CACGAG 1 cut(s) 3816
Bst2UI CCWGG 5 cut(s) 203, 251, 351, 1584, 2469
Bst4CI ACNGT 8 cut(s) 511, 863, 1731, 1880, 2618, 2712, 3566, 3642
Bst6I CTCTTC 5 cut(s) 759, 1366, 1770, 2253, 2427
BstAFI CTTAAG 2 cut(s) 2239, 2624
BstAPI GCANNNNNTGC 3 cut(s) 889, 1072, 3168
BstBI TTCGAA 1 cut(s) 3188
BstC8I GCNNGC 7 cut(s) 533, 903, 1440, 2152, 2358, 3436, 3504
BstDEI CTNAG 8 cut(s) 418, 893, 1116, 1200, 1529, 1609, 1656, 2367
BstDSI CCRYGG 1 cut(s) 805
BstFNI CGCG 1 cut(s) 807
BstMAI GTCTC 9 cut(s) 408, 829, 963, 1039, 1463, 1772, 2186, 2222, 3284
BstMWI GCNNNNNNNGC 8 cut(s) 889, 898, 1072, 1978, 3032, 3168, 3615, 3785
BstNI CCWGG 5 cut(s) 203, 251, 351, 1584, 2469
BstNSI RCATGY 1 cut(s) 1075
BstPAI GACNNNNGTC 2 cut(s) 1341, 2234
BstSCI CCNGG 6 cut(s) 201, 249, 349, 1582, 2114, 2467
BstSFI CTRYAG 2 cut(s) 1377, 2494
BstSLI GKGCMC 1 cut(s) 2316
BstUI CGCG 1 cut(s) 807
BstV1I GCAGC 9 cut(s) 706, 709, 1710, 2166, 2198, 2519, 3035, 3047, 3788
BstV2I GAAGAC 4 cut(s) 74, 708, 2357, 3335
BstX2I RGATCY 3 cut(s) 457, 3067, 3820
BstXI CCANNNNNNTGG 1 cut(s) 1300
BstYI RGATCY 3 cut(s) 457, 3067, 3820
Bsu15I ATCGAT 1 cut(s) 3741
Bsu36I CCTNAGG 1 cut(s) 1656
BsuI GTATCC 1 cut(s) 3554
BsuRI GGCC 5 cut(s) 2314, 2630, 3006, 3279, 3759
BsuTUI ATCGAT 1 cut(s) 3741
BtgI CCRYGG 1 cut(s) 805
BtgZI GCGATG 1 cut(s) 2811
BtrI CACGTC 3 cut(s) 1910, 2008, 2992
BtsI GCAGTG 4 cut(s) 138, 2164, 3169, 3205
Cac8I GCNNGC 7 cut(s) 533, 903, 1440, 2152, 2358, 3436, 3504
CaiI CAGNNNCTG 2 cut(s) 160, 2833
CciI TCATGA 3 cut(s) 94, 3603, 3935
Cfr13I GGNCC 4 cut(s) 774, 2312, 2313, 3004
Cfr42I CCGCGG 1 cut(s) 808
ClaI ATCGAT 1 cut(s) 3741
CseI GACGC 1 cut(s) 2362
Csp6I GTAC 4 cut(s) 1079, 1563, 1886, 1964
CspCI CAANNNNNGTGG 4 cut(s) 1377, 1412, 2940, 2975
CviQI GTAC 4 cut(s) 1079, 1563, 1886, 1964
DdeI CTNAG 8 cut(s) 418, 893, 1116, 1200, 1529, 1609, 1656, 2367
DraI TTTAAA 2 cut(s) 3144, 3493
DrdI GACNNNNNNGTC 2 cut(s) 1786, 2200
DseDI GACNNNNNNGTC 2 cut(s) 1786, 2200
EaeI YGGCCR 1 cut(s) 3277
Eam1104I CTCTTC 5 cut(s) 759, 1366, 1770, 2253, 2427
EarI CTCTTC 5 cut(s) 759, 1366, 1770, 2253, 2427
EciI GGCGGA 1 cut(s) 3219
Eco130I CCWWGG 5 cut(s) 1010, 1447, 2486, 3018, 3669
Eco147I AGGCCT 1 cut(s) 2630
Eco24I GRGCYC 2 cut(s) 2316, 2468
Eco32I GATATC 1 cut(s) 2112
Eco47I GGWCC 1 cut(s) 774
Eco57I CTGAAG 4 cut(s) 720, 1533, 2028, 2810
Eco81I CCTNAGG 1 cut(s) 1656
EcoO109I RGGNCCY 2 cut(s) 2312, 2313
EcoRII CCWGG 5 cut(s) 201, 249, 349, 1582, 2467
EcoRV GATATC 1 cut(s) 2112
EcoT14I CCWWGG 5 cut(s) 1010, 1447, 2486, 3018, 3669
EcoT22I ATGCAT 1 cut(s) 346
EcoT38I GRGCYC 2 cut(s) 2316, 2468
ErhI CCWWGG 5 cut(s) 1010, 1447, 2486, 3018, 3669
FalI AAGNNNNNCTT 4 cut(s) 113, 145, 3067, 3099
FaqI GGGAC 3 cut(s) 504, 2850, 2898
FauI CCCGC 1 cut(s) 524
FauNDI CATATG 1 cut(s) 888
FbaI TGATCA 2 cut(s) 97, 3262
FblI GTMKAC 2 cut(s) 681, 1024
Fnu4HI GCNGC 9 cut(s) 720, 723, 1724, 2155, 2187, 2508, 3024, 3036, 3777
FriOI GRGCYC 2 cut(s) 2316, 2468
Fsp4HI GCNGC 9 cut(s) 720, 723, 1724, 2155, 2187, 2508, 3024, 3036, 3777
GluI GCNGC 9 cut(s) 720, 723, 1724, 2155, 2187, 2508, 3024, 3036, 3777
GsaI CCCAGC 4 cut(s) 2871, 2919, 3162, 3697
GsuI CTGGAG 3 cut(s) 38, 773, 2580
HaeIII GGCC 5 cut(s) 2314, 2630, 3006, 3279, 3759
HapII CCGG 3 cut(s) 287, 2115, 3172
HgaI GACGC 1 cut(s) 2362
HindIII AAGCTT 3 cut(s) 631, 1347, 3616
HpaII CCGG 3 cut(s) 287, 2115, 3172
Hpy166II GTNNAC 9 cut(s) 30, 514, 682, 1025, 1503, 2614, 2708, 2948, 3514
Hpy8I GTNNAC 9 cut(s) 30, 514, 682, 1025, 1503, 2614, 2708, 2948, 3514
Hpy99I CGWCG 2 cut(s) 2009, 3418
HpyCH4III ACNGT 8 cut(s) 511, 863, 1731, 1880, 2618, 2712, 3566, 3642
HpyCH4IV ACGT 5 cut(s) 1909, 2007, 2245, 2991, 3413
HpyF10VI GCNNNNNNNGC 8 cut(s) 889, 898, 1072, 1978, 3032, 3168, 3615, 3785
HpyF3I CTNAG 8 cut(s) 418, 893, 1116, 1200, 1529, 1609, 1656, 2367
HpySE526I ACGT 5 cut(s) 1909, 2007, 2245, 2991, 3413
Kpn2I TCCGGA 1 cut(s) 286
Ksp22I TGATCA 2 cut(s) 97, 3262
KspI CCGCGG 1 cut(s) 808
LmnI GCTCC 3 cut(s) 1193, 2015, 2463
Lsp1109I GCAGC 9 cut(s) 706, 709, 1710, 2166, 2198, 2519, 3035, 3047, 3788
LweI GCATC 7 cut(s) 385, 431, 628, 892, 1644, 2494, 3788
MaeII ACGT 5 cut(s) 1909, 2007, 2245, 2991, 3413
MfeI CAATTG 3 cut(s) 1486, 2174, 3270
MflI RGATCY 3 cut(s) 457, 3067, 3820
MhlI GDGCHC 4 cut(s) 443, 2316, 2468, 3652
MlsI TGGCCA 1 cut(s) 3279
MluNI TGGCCA 1 cut(s) 3279
MlyI GAGTC 4 cut(s) 69, 1750, 2210, 2493
MmeI TCCRAC 4 cut(s) 34, 1828, 3321, 3384
Mox20I TGGCCA 1 cut(s) 3279
Mph1103I ATGCAT 1 cut(s) 346
MroI TCCGGA 1 cut(s) 286
MroXI GAANNNNTTC 7 cut(s) 128, 279, 1799, 3117, 3480, 3529, 3870
MscI TGGCCA 1 cut(s) 3279
MslI CAYNNNNRTG 8 cut(s) 77, 734, 1826, 2454, 2784, 2990, 3152, 3443
Msp20I TGGCCA 1 cut(s) 3279
MspA1I CMGCKG 1 cut(s) 807
MspCI CTTAAG 2 cut(s) 2239, 2624
MspI CCGG 3 cut(s) 287, 2115, 3172
MspR9I CCNGG 6 cut(s) 203, 251, 351, 1584, 2116, 2469
MunI CAATTG 3 cut(s) 1486, 2174, 3270
Mva1269I GAATGC 2 cut(s) 1021, 2388
MvaI CCWGG 5 cut(s) 203, 251, 351, 1584, 2469
MvnI CGCG 1 cut(s) 807
MwoI GCNNNNNNNGC 8 cut(s) 889, 898, 1072, 1978, 3032, 3168, 3615, 3785
NciI CCSGG 1 cut(s) 2116
NdeI CATATG 1 cut(s) 888
NlaIV GGNNCC 8 cut(s) 207, 1189, 1833, 2313, 2314, 2465, 2523, 3069
NmuCI GTSAC 4 cut(s) 1174, 1334, 2618, 2712
NsiI ATGCAT 1 cut(s) 346
NspI RCATGY 1 cut(s) 1075
NspV TTCGAA 1 cut(s) 3188
OliI CACNNNNGTG 2 cut(s) 77, 1826
PagI TCATGA 3 cut(s) 94, 3603, 3935
PceI AGGCCT 1 cut(s) 2630
PctI GAATGC 2 cut(s) 1021, 2388
PdmI GAANNNNTTC 7 cut(s) 128, 279, 1799, 3117, 3480, 3529, 3870
PfeI GAWTC 9 cut(s) 275, 1248, 1795, 2119, 2407, 3185, 3625, 3871, 3905
PflMI CCANNNNNTGG 1 cut(s) 356
PfoI TCCNGGA 4 cut(s) 249, 349, 1582, 2114
PkrI GCNGC 9 cut(s) 721, 724, 1725, 2156, 2188, 2509, 3025, 3037, 3778
PleI GAGTC 4 cut(s) 68, 1749, 2209, 2493
PpsI GAGTC 4 cut(s) 68, 1749, 2209, 2493
PshAI GACNNNNGTC 2 cut(s) 1341, 2234
Psp6I CCWGG 5 cut(s) 201, 249, 349, 1582, 2467
PspFI CCCAGC 4 cut(s) 2867, 2915, 3158, 3693
PspGI CCWGG 5 cut(s) 201, 249, 349, 1582, 2467
PspN4I GGNNCC 8 cut(s) 207, 1189, 1833, 2313, 2314, 2465, 2523, 3069
PspOMI GGGCCC 1 cut(s) 2312
PspPI GGNCC 4 cut(s) 774, 2312, 2313, 3004
PstNI CAGNNNCTG 2 cut(s) 160, 2833
PsuI RGATCY 3 cut(s) 457, 3067, 3820
RsaI GTAC 4 cut(s) 1080, 1564, 1887, 1965
RsaNI GTAC 4 cut(s) 1079, 1563, 1886, 1964
RseI CAYNNNNRTG 8 cut(s) 77, 734, 1826, 2454, 2784, 2990, 3152, 3443
SacII CCGCGG 1 cut(s) 808
SatI GCNGC 9 cut(s) 720, 723, 1724, 2155, 2187, 2508, 3024, 3036, 3777
Sau96I GGNCC 4 cut(s) 774, 2312, 2313, 3004
SchI GAGTC 4 cut(s) 69, 1750, 2210, 2493
ScrFI CCNGG 6 cut(s) 203, 251, 351, 1584, 2116, 2469
SduI GDGCHC 4 cut(s) 443, 2316, 2468, 3652
SfaNI GCATC 7 cut(s) 385, 431, 628, 892, 1644, 2494, 3788
SfcI CTRYAG 2 cut(s) 1377, 2494
Sfr303I CCGCGG 1 cut(s) 808
SfuI TTCGAA 1 cut(s) 3188
SgrBI CCGCGG 1 cut(s) 808
SinI GGWCC 1 cut(s) 774
SmiMI CAYNNNNRTG 8 cut(s) 77, 734, 1826, 2454, 2784, 2990, 3152, 3443
SmlI CTYRAG 9 cut(s) 826, 1054, 1708, 1745, 1889, 2239, 2568, 2624, 3301
SmoI CTYRAG 9 cut(s) 826, 1054, 1708, 1745, 1889, 2239, 2568, 2624, 3301
SseBI AGGCCT 1 cut(s) 2630
SsiI CCGC 6 cut(s) 531, 805, 807, 1838, 2995, 3204
SspI AATATT 3 cut(s) 820, 3011, 3764
StuI AGGCCT 1 cut(s) 2630
StyD4I CCNGG 6 cut(s) 201, 249, 349, 1582, 2114, 2467
StyI CCWWGG 5 cut(s) 1010, 1447, 2486, 3018, 3669
TaaI ACNGT 8 cut(s) 511, 863, 1731, 1880, 2618, 2712, 3566, 3642
TaiI ACGT 5 cut(s) 1912, 2010, 2248, 2994, 3416
TfiI GAWTC 9 cut(s) 275, 1248, 1795, 2119, 2407, 3185, 3625, 3871, 3905
TseFI GTSAC 4 cut(s) 1174, 1334, 2618, 2712
TseI GCWGC 9 cut(s) 719, 722, 1723, 2154, 2186, 2507, 3023, 3035, 3776
Tsp45I GTSAC 4 cut(s) 1174, 1334, 2618, 2712
TspGWI ACGGA 1 cut(s) 531
Van91I CCANNNNNTGG 1 cut(s) 356
Vha464I CTTAAG 2 cut(s) 2239, 2624
VpaK11BI GGWCC 1 cut(s) 774
XapI RAATTY 9 cut(s) 116, 306, 1938, 2281, 2443, 2674, 2971, 3117, 3343
XceI RCATGY 1 cut(s) 1075
XcmI CCANNNNNNNNNTGG 1 cut(s) 1336
XmaJI CCTAGG 1 cut(s) 1010
XmiI GTMKAC 2 cut(s) 681, 1024
XmnI GAANNNNTTC 7 cut(s) 128, 279, 1799, 3117, 3480, 3529, 3870
Zsp2I ATGCAT 1 cut(s) 346
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.