MD02G1166000.v1.1

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
OG0000039
Physical Location & Seq
Forward (+)
14226770 .. 14228851
2082 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1166000.v1.1.491

Sequence Viewer

Length: 1380 bp
ATGAAACTTTTTCATCATTCAGCATCCCTTGGAGATAAGAGCTCTCATATTCCAAAAGATCTTCCAGAAAAGATAGTTGAGCGTTGCAAGGGATTTCCACTTGCTATTACAGTGGTGGGGAGATCGCTTAGTGGGGAGCCTATAGAGATATGGCAAAAAAGAGAACTTGAATTGTCTAAAGGTTTTTCTATTCTTGATTCAGAGACTGAATTGCTGCTCTGCCTTGAACGAAGCTTGGATGCCTTAGATAAAGAAATCATCAAGGAATGTTTCTTAGACTTAGGTTCATTTCCAGAAGACCAAAGAATCGCTGCAGCTGCCCTTGTTGATATCTGGGCAGAGTTATATGATGTAGATACAGATATAGAGTGCATTGCAAACATCTACGAGCTCACCAAACGAAGTCTAGCTAATCTTGTTGTCACAAGGAAGGACAAGATGGAGGGGGACGGGTATTATAGTGAGCACTTTGTTACCCAGCATGATGTTCTTAGGGAACTGGCCATCTATGACACAAAAAAAGGACCGGTAGAACATAGAAAAAGACTGATTATTGACATATGTGGAGACAAACTTCCAAAATGGTGGAGAGAACAGAAGCAGATGAAGGCCCGCTTATTATCTATAACAACTGATGAAGGGTTTTCAACAAAATGGCACAACTTGCAAATGCCAGAAGCTGAGGTTTTAGTATTGAATTTACAGACAAAGAACTATGCTTTACCCGATTCCGTGGTGAACATGGGTGAATTGAAGGCTGTGATAGTCACAAATTATGGTTTCTTACCAGCTGAATTGAGTAACTTCCAACTTTTGAGTTCATTACCAAATCTTAAGAGAATTAGATTAGAACGCATCTCAATTCCTTCCATAACCAAGAATCCCATTCAATTGGAAATGAACATCGACTATTGCAGTGATTTAATTGAATTGCCCGTGGAGGTTTGTGATCTTAGTAAACTAAGGAAGCTCAATGTTACTAACTGTCATAAGCTATCTGCCTTGCCTGAAGAGATTGGAAAGTTGGAAAATTTAGAACTGTTGAGGCTAAGATCCTGCTCAGAACTGTCGAAGCTTCCAACCTCAATGAAGAACCTTGGAAAGGCAAACTTTCTTGACATATCTGATTGCTTCAGCATCAAGGTGTTGCCCGAAGACATTGGTGAAATGAGTAGTTTAAGAAAGATCAACATGAGACAATGCTCAAGGTTGCAAGAGCTGCCTCCATCAGTCATGGATCTTGAGCAGTTAGAGGAAGTGGTCTGTGATGAAGAGACAAAATATTTATGGGAAGCCTTCTCACCGTTTCTCAGCAACGTAAGGATAACTGTGGCCAAAGAGAATATGAACCTAAATTGGCTCCACAAGACTCGGTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
NB-ARC RPW8

Protein Analysis

460

Amino Acids

52.61

Weight (kDa)

5.45

Isoelectric Point (pI)

49.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 314 - 376 1e-07 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 613
AclWI GGATC 2 cut(s) 1047, 1245
AcoI YGGCCR 2 cut(s) 501, 1332
AcsI RAATTY 2 cut(s) 697, 1030
AcuI CTGAAG 2 cut(s) 1029, 1117
AfiI CCNNNNNNNGG 1 cut(s) 1102
AflII CTTAAG 1 cut(s) 833
AgeI ACCGGT 1 cut(s) 526
AgsI TTSAA 7 cut(s) 170, 227, 648, 697, 754, 890, 929
Alw21I GWGCWC 3 cut(s) 44, 393, 468
Alw26I GTCTC 4 cut(s) 197, 561, 1189, 1268
AlwI GGATC 2 cut(s) 1047, 1245
AlwNI CAGNNNCTG 2 cut(s) 206, 680
AoxI GGCC 3 cut(s) 501, 609, 1332
ApeKI GCWGC 5 cut(s) 214, 311, 314, 317, 1219
ApoI RAATTY 2 cut(s) 697, 1030
AsiGI ACCGGT 1 cut(s) 526
AspS9I GGNCC 2 cut(s) 524, 610
AsuHPI GGTGA 5 cut(s) 385, 748, 758, 1175, 1293
AvaII GGWCC 1 cut(s) 524
BalI TGGCCA 2 cut(s) 503, 1334
BanII GRGCYC 2 cut(s) 44, 393
BbsI GAAGAC 2 cut(s) 303, 1161
Bbv12I GWGCWC 3 cut(s) 44, 393, 468
BbvCI CCTCAGC 1 cut(s) 681
BbvI GCAGC 5 cut(s) 201, 298, 304, 326, 1206
BccI CCATC 3 cut(s) 433, 512, 1234
BcoDI GTCTC 4 cut(s) 197, 561, 1189, 1268
BfaI CTAG 1 cut(s) 407
BfmI CTRYAG 2 cut(s) 141, 312
BfrI CTTAAG 1 cut(s) 833
BglII AGATCT 1 cut(s) 58
BisI GCNGC 5 cut(s) 215, 312, 315, 318, 1220
BlsI GCNGC 5 cut(s) 216, 313, 316, 319, 1221
Bme18I GGWCC 1 cut(s) 524
BmgT120I GGNCC 2 cut(s) 524, 610
BmiI GGNNCC 2 cut(s) 138, 1361
BmsI GCATC 4 cut(s) 32, 229, 864, 1146
BpiI GAAGAC 2 cut(s) 303, 1161
Bpu10I CCTNAGC 1 cut(s) 681
BpuEI CTTGAG 2 cut(s) 1189, 1262
BsaJI CCNNGG 4 cut(s) 28, 732, 936, 1096
BsaWI WCCGGW 1 cut(s) 526
Bsc4I CCNNNNNNNGG 1 cut(s) 1102
Bse118I RCCGGY 1 cut(s) 526
Bse1I ACTGG 1 cut(s) 504
Bse3DI GCAATG 1 cut(s) 372
BseDI CCNNGG 4 cut(s) 28, 732, 936, 1096
BseGI GGATG 2 cut(s) 23, 244
BseLI CCNNNNNNNGG 1 cut(s) 1102
BseMI GCAATG 1 cut(s) 372
BseMII CTCAG 3 cut(s) 672, 1074, 1324
BseNI ACTGG 1 cut(s) 504
BseXI GCAGC 5 cut(s) 201, 298, 304, 326, 1206
BseYI CCCAGC 1 cut(s) 477
BshFI GGCC 3 cut(s) 503, 611, 1334
BshTI ACCGGT 1 cut(s) 526
BsiHKAI GWGCWC 3 cut(s) 44, 393, 468
BsiSI CCGG 1 cut(s) 527
BslFI GGGAC 1 cut(s) 461
BslI CCNNNNNNNGG 1 cut(s) 1102
BsmAI GTCTC 4 cut(s) 197, 561, 1189, 1268
BsmFI GGGAC 1 cut(s) 461
BsnI GGCC 3 cut(s) 503, 611, 1334
Bsp1286I GDGCHC 3 cut(s) 44, 393, 468
Bsp143I GATC 6 cut(s) 58, 122, 949, 1052, 1185, 1237
BspACI CCGC 1 cut(s) 613
BspANI GGCC 3 cut(s) 503, 611, 1334
BspCNI CTCAG 3 cut(s) 673, 1073, 1323
BspLI GGNNCC 2 cut(s) 138, 1361
BspMAI CTGCAG 1 cut(s) 316
BspPI GGATC 2 cut(s) 1047, 1245
BspTI CTTAAG 1 cut(s) 833
BsrDI GCAATG 1 cut(s) 372
BsrFI RCCGGY 1 cut(s) 526
BsrI ACTGG 1 cut(s) 504
BssAI RCCGGY 1 cut(s) 526
BssECI CCNNGG 4 cut(s) 28, 732, 936, 1096
BssMI GATC 6 cut(s) 58, 122, 949, 1052, 1185, 1237
BssT1I CCWWGG 2 cut(s) 28, 1096
Bst4CI ACNGT 6 cut(s) 112, 986, 1041, 1068, 1305, 1330
Bst6I CTCTTC 2 cut(s) 1005, 1266
BstAFI CTTAAG 1 cut(s) 833
BstAPI GCANNNNNTGC 2 cut(s) 664, 1219
BstC8I GCNNGC 1 cut(s) 613
BstDSI CCRYGG 2 cut(s) 732, 936
BstENI CCTNNNNNAGG 1 cut(s) 1100
BstF5I GGATG 2 cut(s) 23, 244
BstKTI GATC 6 cut(s) 61, 125, 952, 1055, 1188, 1240
BstMAI GTCTC 4 cut(s) 197, 561, 1189, 1268
BstMBI GATC 6 cut(s) 58, 122, 949, 1052, 1185, 1237
BstMWI GCNNNNNNNGC 3 cut(s) 317, 664, 1219
BstSFI CTRYAG 2 cut(s) 141, 312
BstV1I GCAGC 5 cut(s) 201, 298, 304, 326, 1206
BstV2I GAAGAC 2 cut(s) 303, 1161
BstX2I RGATCY 3 cut(s) 58, 1052, 1237
BstXI CCANNNNNNTGG 2 cut(s) 585, 892
BstYI RGATCY 3 cut(s) 58, 1052, 1237
BsuRI GGCC 3 cut(s) 503, 611, 1334
BtgI CCRYGG 2 cut(s) 732, 936
BtsCI GGATG 2 cut(s) 23, 244
BtsI GCAGTG 1 cut(s) 922
BtsIMutI CAGTG 2 cut(s) 117, 922
Cac8I GCNNGC 1 cut(s) 613
CaiI CAGNNNCTG 2 cut(s) 206, 680
Cfr10I RCCGGY 1 cut(s) 526
Cfr13I GGNCC 2 cut(s) 524, 610
CspAI ACCGGT 1 cut(s) 526
CviAII CATG 4 cut(s) 482, 742, 1192, 1234
DpnI GATC 6 cut(s) 60, 124, 951, 1054, 1187, 1239
DpnII GATC 6 cut(s) 58, 122, 949, 1052, 1185, 1237
EaeI YGGCCR 2 cut(s) 501, 1332
Eam1104I CTCTTC 2 cut(s) 1005, 1266
EarI CTCTTC 2 cut(s) 1005, 1266
Ecl136II GAGCTC 2 cut(s) 42, 391
Eco130I CCWWGG 2 cut(s) 28, 1096
Eco24I GRGCYC 2 cut(s) 44, 393
Eco32I GATATC 1 cut(s) 331
Eco47I GGWCC 1 cut(s) 524
Eco53kI GAGCTC 2 cut(s) 42, 391
Eco57I CTGAAG 2 cut(s) 1029, 1117
EcoICRI GAGCTC 2 cut(s) 42, 391
EcoNI CCTNNNNNAGG 1 cut(s) 1100
EcoRV GATATC 1 cut(s) 331
EcoT14I CCWWGG 2 cut(s) 28, 1096
EcoT38I GRGCYC 2 cut(s) 44, 393
ErhI CCWWGG 2 cut(s) 28, 1096
FaeI CATG 4 cut(s) 485, 745, 1195, 1237
FalI AAGNNNNNCTT 4 cut(s) 599, 631, 1094, 1126
FaqI GGGAC 1 cut(s) 461
FatI CATG 4 cut(s) 481, 741, 1191, 1233
FauI CCCGC 1 cut(s) 620
FauNDI CATATG 1 cut(s) 560
Fnu4HI GCNGC 5 cut(s) 215, 312, 315, 318, 1220
FokI GGATG 2 cut(s) 10, 251
FriOI GRGCYC 2 cut(s) 44, 393
Fsp4HI GCNGC 5 cut(s) 215, 312, 315, 318, 1220
FspBI CTAG 1 cut(s) 407
GluI GCNGC 5 cut(s) 215, 312, 315, 318, 1220
GsaI CCCAGC 1 cut(s) 481
HaeIII GGCC 3 cut(s) 503, 611, 1334
HapII CCGG 1 cut(s) 527
Hin1II CATG 4 cut(s) 485, 745, 1195, 1237
HindIII AAGCTT 2 cut(s) 232, 1073
HinfI GANTC 5 cut(s) 197, 306, 728, 880, 1369
HpaII CCGG 1 cut(s) 527
HphI GGTGA 5 cut(s) 385, 748, 758, 1175, 1293
Hpy166II GTNNAC 2 cut(s) 739, 959
Hpy188I TCNGA 4 cut(s) 202, 1063, 1126, 1379
Hpy188III TCNNGA 5 cut(s) 65, 194, 293, 1115, 1241
Hpy8I GTNNAC 2 cut(s) 739, 959
HpyAV CCTTC 6 cut(s) 424, 601, 632, 748, 876, 1306
HpyCH4III ACNGT 6 cut(s) 112, 986, 1041, 1068, 1305, 1330
HpyCH4IV ACGT 1 cut(s) 1317
HpyCH4V TGCA 7 cut(s) 87, 314, 372, 377, 667, 915, 1213
HpyF10VI GCNNNNNNNGC 3 cut(s) 317, 664, 1219
HpySE526I ACGT 1 cut(s) 1317
Hsp92II CATG 4 cut(s) 485, 745, 1195, 1237
Kzo9I GATC 6 cut(s) 58, 122, 949, 1052, 1185, 1237
LmnI GCTCC 2 cut(s) 136, 1365
Lsp1109I GCAGC 5 cut(s) 201, 298, 304, 326, 1206
LweI GCATC 4 cut(s) 32, 229, 864, 1146
MaeI CTAG 1 cut(s) 407
MaeII ACGT 1 cut(s) 1317
MaeIII GTNAC 5 cut(s) 421, 472, 766, 800, 976
MalI GATC 6 cut(s) 60, 124, 951, 1054, 1187, 1239
MboI GATC 6 cut(s) 58, 122, 949, 1052, 1185, 1237
MboII GAAGA 6 cut(s) 53, 308, 1022, 1102, 1166, 1283
MfeI CAATTG 1 cut(s) 890
MflI RGATCY 3 cut(s) 58, 1052, 1237
MhlI GDGCHC 3 cut(s) 44, 393, 468
MlsI TGGCCA 2 cut(s) 503, 1334
MluNI TGGCCA 2 cut(s) 503, 1334
MlyI GAGTC 1 cut(s) 1363
MmeI TCCRAC 3 cut(s) 832, 1005, 1103
MnlI CCTC 7 cut(s) 436, 676, 934, 1038, 1093, 1233, 1246
Mox20I TGGCCA 2 cut(s) 503, 1334
MscI TGGCCA 2 cut(s) 503, 1334
MseI TTAA 3 cut(s) 834, 923, 1178
MslI CAYNNNNRTG 1 cut(s) 1142
Msp20I TGGCCA 2 cut(s) 503, 1334
MspA1I CMGCKG 2 cut(s) 317, 791
MspCI CTTAAG 1 cut(s) 833
MspI CCGG 1 cut(s) 527
MunI CAATTG 1 cut(s) 890
MwoI GCNNNNNNNGC 3 cut(s) 317, 664, 1219
NdeI CATATG 1 cut(s) 560
NdeII GATC 6 cut(s) 58, 122, 949, 1052, 1185, 1237
NlaIII CATG 4 cut(s) 485, 745, 1195, 1237
NlaIV GGNNCC 2 cut(s) 138, 1361
NmuCI GTSAC 2 cut(s) 421, 766
PfeI GAWTC 4 cut(s) 197, 306, 728, 880
PinAI ACCGGT 1 cut(s) 526
PkrI GCNGC 5 cut(s) 216, 313, 316, 319, 1221
PleI GAGTC 1 cut(s) 1363
PpsI GAGTC 1 cut(s) 1363
Psp124BI GAGCTC 2 cut(s) 44, 393
PspFI CCCAGC 1 cut(s) 477
PspN4I GGNNCC 2 cut(s) 138, 1361
PspPI GGNCC 2 cut(s) 524, 610
PstI CTGCAG 1 cut(s) 316
PstNI CAGNNNCTG 2 cut(s) 206, 680
PsuI RGATCY 3 cut(s) 58, 1052, 1237
PvuII CAGCTG 2 cut(s) 317, 791
RseI CAYNNNNRTG 1 cut(s) 1142
SacI GAGCTC 2 cut(s) 44, 393
SaqAI TTAA 3 cut(s) 834, 923, 1178
SatI GCNGC 5 cut(s) 215, 312, 315, 318, 1220
Sau3AI GATC 6 cut(s) 58, 122, 949, 1052, 1185, 1237
Sau96I GGNCC 2 cut(s) 524, 610
SchI GAGTC 1 cut(s) 1363
SduI GDGCHC 3 cut(s) 44, 393, 468
SfaNI GCATC 4 cut(s) 32, 229, 864, 1146
SfcI CTRYAG 2 cut(s) 141, 312
SinI GGWCC 1 cut(s) 524
SmiMI CAYNNNNRTG 1 cut(s) 1142
SmlI CTYRAG 3 cut(s) 833, 1204, 1241
SmoI CTYRAG 3 cut(s) 833, 1204, 1241
SsiI CCGC 1 cut(s) 613
SspI AATATT 1 cut(s) 1283
SspMI CTAG 1 cut(s) 407
SstI GAGCTC 2 cut(s) 44, 393
StyI CCWWGG 2 cut(s) 28, 1096
TaaI ACNGT 6 cut(s) 112, 986, 1041, 1068, 1305, 1330
TaiI ACGT 1 cut(s) 1320
TaqI TCGA 2 cut(s) 906, 1070
TfiI GAWTC 4 cut(s) 197, 306, 728, 880
Tru1I TTAA 3 cut(s) 834, 923, 1178
Tru9I TTAA 3 cut(s) 834, 923, 1178
TscAI CASTG 2 cut(s) 117, 922
TseFI GTSAC 2 cut(s) 421, 766
TseI GCWGC 5 cut(s) 214, 311, 314, 317, 1219
Tsp45I GTSAC 2 cut(s) 421, 766
TspDTI ATGAA 9 cut(s) 17, 276, 620, 651, 810, 914, 1103, 1284, 1361
TspGWI ACGGA 1 cut(s) 721
TspRI CASTG 2 cut(s) 117, 922
Vha464I CTTAAG 1 cut(s) 833
VpaK11BI GGWCC 1 cut(s) 524
XagI CCTNNNNNAGG 1 cut(s) 1100
XapI RAATTY 2 cut(s) 697, 1030
XspI CTAG 1 cut(s) 407
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.