Rh2DG643700

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Reverse (-)
87074547 .. 87082894
8348 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG643700.1

Sequence Viewer

Length: 1746 bp
ATGACATCGAGGTCTGAATTTTTGGGATTCGGTTCTTCATATCGTCTACAACTATTAGACAATGACAATGCAATGCAGCTATTTCATCATACAGCATCCTTGGGAGATAAGAGCTCTCATATTCCAATACATCTTTCAAAAGAGATAGTAAAGCGCTGTAATGGATTTCCACTGGCCATTACAGTGGTGGGAAGATCACTTTGCGGTAAACCTATAGATATGTGGCGAAGCAGAGTAATTGAATGGTCGAAAGGTTATTCTATTTTAGATTTTGAGACAGAATTGCTTCTTCGCCTCAAAACTAGCTTAGATGCCTTAGATAATGAAATGCCTATGGTTAAGGAATGTTTCTTAGACCTAGGTGTGTTTCCAGAAGATGCTACTATCGAAGTTACAGGTCTCATTGATATGTGGGCAGAGTTGTATGATTTGGACTTGGGGACTTTATGCATTGCCAAACTCTATGAACTCAACAATCGCAGTCTAGCTAATTTGTCACGATTTAGAGGTATTGGGTTGATAGTTGAGGAGGATGGAGACTATAGTGACTACACTGTTAAACAACATGATTTGCTTAGAGAATTGGCTATCTACCATTCGAAACGAGATCCGATGGAGCATAGAGAAAGAGTAATTATAGAAATATCTGGAAACAATCTTCCCAAGTGGTGGAGTGAACAGAAGTATCAACCCATCAAGGCTCGTCTTGTATCAATCTTAACTGATGGAGAATTCTCTGCGAAATGGCCCGACATGCAACTACCTGAAGCACAGGTTCTAGTGTTGAATTTTCAGACGCAATATAACTTTGCCTTGCCCGAATGTGTGGAGAAAATGGAAAAGCTCAAGATGCTCGTTCTCATAAATTCTAGCTTTTATAATAACATAGATAATTTTCAACTTCTGGATTCCTTATCAAATCTAAGGAGTATAAGATTAGACGGCCTCAATCTTTCTTTCATAACCGAGAGCCCGGTACAGTTGAAGACTCTACACAAGTTATATTTGGTAAACGGTGAATCTCTCGGCAACGGTCCTGTCAAATTATCACATGTATTTCCAAATCTAAAGGAAATGTTCATTGATTGGTTCATCAAATTGGAGGAATTGCCTGCAGAGCTCTGCGAGCTGATTGAATTAACAAAGCTCACAATCAGCAGTTGTAATGTGCTTTCTGGCTTGCCTGAAGCGATTGGAAATCTGGTTAATTTAGAAGTGTTGAGGCTTCGGTTCAATTCAGAGCTTTCAGAGGTTCCAGACTCGATTGGAAATCTCAACAAATTAAAAAATTTTGAGATTTCTGCTTGCCATAAAATTGAGAAATTGCCTGAACACATAGGTGAGCTGAAGTGTTTAACAAATCTCCGCATCATGTGGTGCGATTTGCTATCTGCCTTGCCTGAAGCGATTGGAAATTTGGTCAATCTAGAAGTATTGAGTCTAAGGTTCTGTGGCAGGTTTTCAGAGTTGCCAGAGTCGATTAGAAATCTCAAAAAGTTAAACTTTCTAGACATTCATGATTGCAGCATAATCAAGGAGTTGCCTGAACAGATTGGTGAATTGAAGAGTTTAAGAATGCTGCAAATGAGTGGTTGCTCCGAATTGAGAAACCTGCCTCAATCAGTTTCAGATCTTGAGCAGTTAGAGGAAGTGATATGCGATGAGTGGGACGAAACACATCTATGGACACCCTTTTTACCCACTCTCAAAAACCTTCGCATCGTGGTGTATAAGGAGGAAGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

581

Amino Acids

66.59

Weight (kDa)

5.07

Isoelectric Point (pI)

47.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 373 - 483 1.2e-13 Leucine-rich repeat region
LRR_14 PF23598 464 - 508 4.3e-06 Leucine-rich repeat region
LRR_13 PF23286 473 - 544 7.4e-06 Disease resistance protein RPS4B-like, leucine-rich repeats
LRR_14 PF23598 493 - 577 2.9e-10 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 879
AasI GACNNNNNNGTC 1 cut(s) 10
Acc36I ACCTGC 2 cut(s) 1446, 1620
AccB7I CCANNNNNTGG 1 cut(s) 669
AccI GTMKAC 1 cut(s) 46
AciI CCGC 2 cut(s) 204, 1366
AclWI GGATC 1 cut(s) 602
AcoI YGGCCR 1 cut(s) 174
AcsI RAATTY 6 cut(s) 17, 731, 787, 865, 1288, 1414
AcuI CTGAAG 4 cut(s) 786, 1206, 1367, 1422
AfaI GTAC 1 cut(s) 978
AfeI AGCGCT 1 cut(s) 155
AfiI CCNNNNNNNGG 1 cut(s) 669
AflIII ACRYGT 1 cut(s) 1051
AgsI TTSAA 8 cut(s) 138, 242, 787, 899, 985, 1136, 1234, 1564
AjuI GAANNNNNNNTTGG 2 cut(s) 118, 150
AleI CACNNNNGTG 1 cut(s) 1338
Alw21I GWGCWC 2 cut(s) 116, 1122
Alw26I GTCTC 3 cut(s) 269, 404, 531
AlwI GGATC 1 cut(s) 602
Aor51HI AGCGCT 1 cut(s) 155
AoxI GGCC 3 cut(s) 174, 746, 943
ApeKI GCWGC 3 cut(s) 76, 1524, 1579
ApoI RAATTY 6 cut(s) 17, 731, 787, 865, 1288, 1414
Asp700I GAANNNNTTC 1 cut(s) 285
AspA2I CCTAGG 1 cut(s) 358
AspLEI GCGC 1 cut(s) 156
AspS9I GGNCC 2 cut(s) 747, 1034
AsuC2I CCSGG 1 cut(s) 974
AsuHPI GGTGA 3 cut(s) 1028, 1352, 1568
AsuII TTCGAA 1 cut(s) 599
AvaII GGWCC 1 cut(s) 1034
AvrII CCTAGG 1 cut(s) 358
BaeI ACNNNNGTAYC 2 cut(s) 668, 701
BalI TGGCCA 1 cut(s) 176
BanII GRGCYC 3 cut(s) 116, 974, 1122
BbsI GAAGAC 1 cut(s) 992
Bbv12I GWGCWC 2 cut(s) 116, 1122
BbvI GCAGC 3 cut(s) 88, 1536, 1566
BccI CCATC 4 cut(s) 527, 607, 701, 719
BceAI ACGGC 1 cut(s) 958
BcnI CCSGG 1 cut(s) 974
BcoDI GTCTC 3 cut(s) 269, 404, 531
BfaI CTAG 7 cut(s) 303, 359, 485, 779, 870, 1427, 1508
BfmI CTRYAG 3 cut(s) 213, 541, 1113
BfoI RGCGCY 1 cut(s) 157
BfuAI ACCTGC 2 cut(s) 1446, 1620
BglII AGATCT 1 cut(s) 1630
BisI GCNGC 3 cut(s) 77, 1525, 1580
BlnI CCTAGG 1 cut(s) 358
BlsI GCNGC 3 cut(s) 78, 1526, 1581
Bme1390I CCNGG 1 cut(s) 974
Bme18I GGWCC 1 cut(s) 1034
BmgT120I GGNCC 2 cut(s) 747, 1034
BmiI GGNNCC 1 cut(s) 1254
BmrFI CCNGG 1 cut(s) 974
BmsI GCATC 6 cut(s) 104, 301, 367, 840, 1377, 1728
BpiI GAAGAC 1 cut(s) 992
Bpu14I TTCGAA 1 cut(s) 599
BpuEI CTTGAG 2 cut(s) 830, 1655
BpuMI CCSGG 1 cut(s) 974
BsaI GGTCTC 1 cut(s) 404
BsaJI CCNNGG 2 cut(s) 99, 358
Bsc4I CCNNNNNNNGG 1 cut(s) 669
Bse1I ACTGG 1 cut(s) 177
Bse3DI GCAATG 2 cut(s) 78, 450
BseDI CCNNGG 2 cut(s) 99, 358
BseGI GGATG 2 cut(s) 95, 538
BseLI CCNNNNNNNGG 1 cut(s) 669
BseMI GCAATG 2 cut(s) 78, 450
BseNI ACTGG 1 cut(s) 177
BseRI GAGGAG 1 cut(s) 542
BseXI GCAGC 3 cut(s) 88, 1536, 1566
BshFI GGCC 3 cut(s) 176, 748, 945
BsiHKAI GWGCWC 2 cut(s) 116, 1122
BsiSI CCGG 1 cut(s) 974
BslFI GGGAC 2 cut(s) 454, 1682
BslI CCNNNNNNNGG 1 cut(s) 669
BsmAI GTCTC 3 cut(s) 269, 404, 531
BsmFI GGGAC 2 cut(s) 454, 1682
BsmI GAATGC 1 cut(s) 1581
BsnI GGCC 3 cut(s) 176, 748, 945
Bso31I GGTCTC 1 cut(s) 404
Bsp119I TTCGAA 1 cut(s) 599
Bsp1286I GDGCHC 3 cut(s) 116, 974, 1122
Bsp143I GATC 3 cut(s) 194, 607, 1630
BspACI CCGC 2 cut(s) 204, 1366
BspANI GGCC 3 cut(s) 176, 748, 945
BspHI TCATGA 1 cut(s) 1516
BspLI GGNNCC 1 cut(s) 1254
BspMAI CTGCAG 1 cut(s) 1117
BspMI ACCTGC 2 cut(s) 1446, 1620
BspPI GGATC 1 cut(s) 602
BspT104I TTCGAA 1 cut(s) 599
BspTNI GGTCTC 1 cut(s) 404
BsrDI GCAATG 2 cut(s) 78, 450
BsrI ACTGG 1 cut(s) 177
BssECI CCNNGG 2 cut(s) 99, 358
BssMI GATC 3 cut(s) 194, 607, 1630
BssT1I CCWWGG 2 cut(s) 99, 358
Bst4CI ACNGT 5 cut(s) 184, 556, 981, 1016, 1034
Bst6I CTCTTC 1 cut(s) 1559
BstBI TTCGAA 1 cut(s) 599
BstC8I GCNNGC 4 cut(s) 1113, 1127, 1181, 1306
BstDEI CTNAG 6 cut(s) 307, 316, 352, 575, 923, 1442
BstF5I GGATG 2 cut(s) 95, 538
BstH2I RGCGCY 1 cut(s) 157
BstHHI GCGC 1 cut(s) 156
BstKTI GATC 3 cut(s) 197, 610, 1633
BstMAI GTCTC 3 cut(s) 269, 404, 531
BstMBI GATC 3 cut(s) 194, 607, 1630
BstMWI GCNNNNNNNGC 4 cut(s) 754, 850, 1117, 1126
BstNSI RCATGY 2 cut(s) 757, 1055
BstSCI CCNGG 1 cut(s) 972
BstSFI CTRYAG 3 cut(s) 213, 541, 1113
BstV1I GCAGC 3 cut(s) 88, 1536, 1566
BstV2I GAAGAC 1 cut(s) 992
BstX2I RGATCY 2 cut(s) 607, 1630
BstXI CCANNNNNNTGG 1 cut(s) 184
BstYI RGATCY 2 cut(s) 607, 1630
BsuRI GGCC 3 cut(s) 176, 748, 945
BtgZI GCGATG 1 cut(s) 1674
BtsCI GGATG 2 cut(s) 95, 538
BtsIMutI CAGTG 3 cut(s) 170, 189, 552
BveI ACCTGC 2 cut(s) 1446, 1620
Cac8I GCNNGC 4 cut(s) 1113, 1127, 1181, 1306
CciI TCATGA 1 cut(s) 1516
CfoI GCGC 1 cut(s) 156
Cfr13I GGNCC 2 cut(s) 747, 1034
CseI GACGC 1 cut(s) 805
Csp6I GTAC 1 cut(s) 977
CviAII CATG 5 cut(s) 566, 754, 1052, 1372, 1517
CviQI GTAC 1 cut(s) 977
DdeI CTNAG 6 cut(s) 307, 316, 352, 575, 923, 1442
DpnI GATC 3 cut(s) 196, 609, 1632
DpnII GATC 3 cut(s) 194, 607, 1630
DrdI GACNNNNNNGTC 1 cut(s) 10
DseDI GACNNNNNNGTC 1 cut(s) 10
EaeI YGGCCR 1 cut(s) 174
Eam1104I CTCTTC 1 cut(s) 1559
EarI CTCTTC 1 cut(s) 1559
Ecl136II GAGCTC 2 cut(s) 114, 1120
Eco130I CCWWGG 2 cut(s) 99, 358
Eco24I GRGCYC 3 cut(s) 116, 974, 1122
Eco31I GGTCTC 1 cut(s) 404
Eco47I GGWCC 1 cut(s) 1034
Eco47III AGCGCT 1 cut(s) 155
Eco53kI GAGCTC 2 cut(s) 114, 1120
Eco57I CTGAAG 4 cut(s) 786, 1206, 1367, 1422
EcoICRI GAGCTC 2 cut(s) 114, 1120
EcoRI GAATTC 1 cut(s) 731
EcoT14I CCWWGG 2 cut(s) 99, 358
EcoT22I ATGCAT 1 cut(s) 452
EcoT38I GRGCYC 3 cut(s) 116, 974, 1122
ErhI CCWWGG 2 cut(s) 99, 358
FaeI CATG 5 cut(s) 569, 757, 1055, 1375, 1520
FalI AAGNNNNNCTT 2 cut(s) 1487, 1519
FaqI GGGAC 2 cut(s) 454, 1682
FatI CATG 5 cut(s) 565, 753, 1051, 1371, 1516
FblI GTMKAC 1 cut(s) 46
Fnu4HI GCNGC 3 cut(s) 77, 1525, 1580
FokI GGATG 2 cut(s) 82, 545
FriOI GRGCYC 3 cut(s) 116, 974, 1122
Fsp4HI GCNGC 3 cut(s) 77, 1525, 1580
FspBI CTAG 7 cut(s) 303, 359, 485, 779, 870, 1427, 1508
GlaI GCGC 1 cut(s) 155
GluI GCNGC 3 cut(s) 77, 1525, 1580
HaeII RGCGCY 1 cut(s) 157
HaeIII GGCC 3 cut(s) 176, 748, 945
HapII CCGG 1 cut(s) 974
HgaI GACGC 1 cut(s) 805
HhaI GCGC 1 cut(s) 156
Hin1II CATG 5 cut(s) 569, 757, 1055, 1375, 1520
Hin6I GCGC 1 cut(s) 154
HinP1I GCGC 1 cut(s) 154
HinfI GANTC 7 cut(s) 27, 908, 988, 1019, 1259, 1438, 1475
HpaII CCGG 1 cut(s) 974
HphI GGTGA 3 cut(s) 1028, 1352, 1568
Hpy166II GTNNAC 4 cut(s) 47, 209, 677, 1012
Hpy188I TCNGA 8 cut(s) 16, 612, 795, 1240, 1249, 1465, 1600, 1630
Hpy8I GTNNAC 4 cut(s) 47, 209, 677, 1012
HpyAV CCTTC 1 cut(s) 1724
HpyCH4III ACNGT 5 cut(s) 184, 556, 981, 1016, 1034
HpyCH4V TGCA 7 cut(s) 71, 76, 450, 757, 1115, 1524, 1582
HpyF10VI GCNNNNNNNGC 4 cut(s) 754, 850, 1117, 1126
HpyF3I CTNAG 6 cut(s) 307, 316, 352, 575, 923, 1442
Hsp92II CATG 5 cut(s) 569, 757, 1055, 1375, 1520
HspAI GCGC 1 cut(s) 154
Kzo9I GATC 3 cut(s) 194, 607, 1630
LmnI GCTCC 2 cut(s) 616, 1601
Lsp1109I GCAGC 3 cut(s) 88, 1536, 1566
LweI GCATC 6 cut(s) 104, 301, 367, 840, 1377, 1728
MaeI CTAG 7 cut(s) 303, 359, 485, 779, 870, 1427, 1508
MaeIII GTNAC 3 cut(s) 391, 495, 545
MalI GATC 3 cut(s) 196, 609, 1632
MboI GATC 3 cut(s) 194, 607, 1630
MboII GAAGA 7 cut(s) 27, 204, 281, 386, 650, 997, 1576
MflI RGATCY 2 cut(s) 607, 1630
MhlI GDGCHC 3 cut(s) 116, 974, 1122
MlsI TGGCCA 1 cut(s) 176
MluNI TGGCCA 1 cut(s) 176
MlyI GAGTC 4 cut(s) 982, 1253, 1447, 1484
Mox20I TGGCCA 1 cut(s) 176
Mph1103I ATGCAT 1 cut(s) 452
MroXI GAANNNNTTC 1 cut(s) 285
MscI TGGCCA 1 cut(s) 176
MseI TTAA 9 cut(s) 339, 558, 719, 1139, 1206, 1283, 1355, 1499, 1571
MslI CAYNNNNRTG 5 cut(s) 182, 407, 1338, 1681, 1724
Msp20I TGGCCA 1 cut(s) 176
MspI CCGG 1 cut(s) 974
MspR9I CCNGG 1 cut(s) 974
Mva1269I GAATGC 1 cut(s) 1581
MwoI GCNNNNNNNGC 4 cut(s) 754, 850, 1117, 1126
NciI CCSGG 1 cut(s) 974
NdeII GATC 3 cut(s) 194, 607, 1630
NlaIII CATG 5 cut(s) 569, 757, 1055, 1375, 1520
NlaIV GGNNCC 1 cut(s) 1254
NmeAIII GCCGAG 1 cut(s) 1005
NmuCI GTSAC 2 cut(s) 495, 545
NsiI ATGCAT 1 cut(s) 452
NspI RCATGY 2 cut(s) 757, 1055
NspV TTCGAA 1 cut(s) 599
OliI CACNNNNGTG 1 cut(s) 1338
PagI TCATGA 1 cut(s) 1516
PciI ACATGT 1 cut(s) 1051
PctI GAATGC 1 cut(s) 1581
PdmI GAANNNNTTC 1 cut(s) 285
PfeI GAWTC 3 cut(s) 27, 908, 1019
PflMI CCANNNNNTGG 1 cut(s) 669
PkrI GCNGC 3 cut(s) 78, 1526, 1581
PleI GAGTC 4 cut(s) 982, 1253, 1446, 1483
PpsI GAGTC 4 cut(s) 982, 1253, 1446, 1483
PscI ACATGT 1 cut(s) 1051
PsiI TTATAA 1 cut(s) 879
Psp124BI GAGCTC 2 cut(s) 116, 1122
PspN4I GGNNCC 1 cut(s) 1254
PspPI GGNCC 2 cut(s) 747, 1034
PstI CTGCAG 1 cut(s) 1117
PsuI RGATCY 2 cut(s) 607, 1630
RsaI GTAC 1 cut(s) 978
RsaNI GTAC 1 cut(s) 977
RseI CAYNNNNRTG 5 cut(s) 182, 407, 1338, 1681, 1724
SacI GAGCTC 2 cut(s) 116, 1122
SaqAI TTAA 9 cut(s) 339, 558, 719, 1139, 1206, 1283, 1355, 1499, 1571
SatI GCNGC 3 cut(s) 77, 1525, 1580
Sau3AI GATC 3 cut(s) 194, 607, 1630
Sau96I GGNCC 2 cut(s) 747, 1034
SchI GAGTC 4 cut(s) 982, 1253, 1447, 1484
ScrFI CCNGG 1 cut(s) 974
SduI GDGCHC 3 cut(s) 116, 974, 1122
SfaNI GCATC 6 cut(s) 104, 301, 367, 840, 1377, 1728
SfcI CTRYAG 3 cut(s) 213, 541, 1113
SfuI TTCGAA 1 cut(s) 599
SinI GGWCC 1 cut(s) 1034
SmiMI CAYNNNNRTG 5 cut(s) 182, 407, 1338, 1681, 1724
SmlI CTYRAG 2 cut(s) 845, 1634
SmoI CTYRAG 2 cut(s) 845, 1634
SsiI CCGC 2 cut(s) 204, 1366
SspMI CTAG 7 cut(s) 303, 359, 485, 779, 870, 1427, 1508
SstI GAGCTC 2 cut(s) 116, 1122
StyD4I CCNGG 1 cut(s) 972
StyI CCWWGG 2 cut(s) 99, 358
TaaI ACNGT 5 cut(s) 184, 556, 981, 1016, 1034
TaqI TCGA 6 cut(s) 8, 248, 387, 599, 1262, 1478
TfiI GAWTC 3 cut(s) 27, 908, 1019
Tru1I TTAA 9 cut(s) 339, 558, 719, 1139, 1206, 1283, 1355, 1499, 1571
Tru9I TTAA 9 cut(s) 339, 558, 719, 1139, 1206, 1283, 1355, 1499, 1571
TscAI CASTG 3 cut(s) 177, 189, 559
TseFI GTSAC 2 cut(s) 495, 545
TseI GCWGC 3 cut(s) 76, 1524, 1579
Tsp45I GTSAC 2 cut(s) 495, 545
TspDTI ATGAA 8 cut(s) 27, 74, 339, 480, 949, 1069, 1081, 1505
TspRI CASTG 3 cut(s) 177, 189, 559
Van91I CCANNNNNTGG 1 cut(s) 669
VpaK11BI GGWCC 1 cut(s) 1034
XapI RAATTY 6 cut(s) 17, 731, 787, 865, 1288, 1414
XbaI TCTAGA 2 cut(s) 1426, 1507
XceI RCATGY 2 cut(s) 757, 1055
XcmI CCANNNNNNNNNTGG 1 cut(s) 184
XmaJI CCTAGG 1 cut(s) 358
XmiI GTMKAC 1 cut(s) 46
XmnI GAANNNNTTC 1 cut(s) 285
XspI CTAG 7 cut(s) 303, 359, 485, 779, 870, 1427, 1508
Zsp2I ATGCAT 1 cut(s) 452
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.