Rmu_sc0025829.1_g000001

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0025829.1
OG0000039
Physical Location & Seq
Forward (+)
38 .. 2225
2188 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0025829.1_g000001.1.cds

Sequence Viewer

Length: 1569 bp
atgccaaatttcaagattctggtgacatcaagatcacagtttcctgaatatggctcagtttatcatctaaagtcattgaatgatagagatgcaatgactcttttccgccattcggcatccctgggagatggtcaatggaataatcttgctagagagatagtagcgccttgtaagggatatccacttgcaattaaagtggttggaaaatcacttcgcggaaaaccgattgagttctggcgtaaaagagcattggcatggtctaaaggtgattctattattgattctgagactgaagtgcttcttcgccttcaaaccagcttagatgctttggatgaaaaagaagctttcatcaaagaatgttttttagaccttggttcatttccccaagaccaaagaattccagcagctgctctgattgatatgtgggcagagttatatgaaggtctcgataaagattttctggccattacaaacgtgtatgagcttaccacccgaagtttggctgatcttgtagtcacaaggaaggagacagtggaggattatgactactacagtgaacactttgtcacccaacatgatttgctcagacagctcgctgtctaccaagcgaaactagacccaagtaaaaaacgactgatcataggcaaccgtggagacaatctacctaagtgcttgactgaacagaagcatcaaccaattaaacctcgcctattatccatctcctctgatgaaacgttctcgacaaacttacacaacattcaactagctgatgttgaggttctagttttgaatttcaacacaaagagttatgctttacctgaatttgtggagaaaatggttaatctgaaggttctaatagtcacaaatcatggtttcatacctgctgaattgagtaattttcacctactggactctttaccaaatctgaagagaatcagactagagcgtgtttcaattccttctataaccaagcatcccatacagttgaagagtttaaagaagatctctttattcatgtgcagtattggtgaagctttcagcaattgctccttccaaatttcaaatgcattgccaaatttagaggaactgaatattgactattgcaatgatttggtgaaattgcctgaggagctctgcaatctggttcgcctaaagaagctgagtatcaccaactgtcataagctatctgccttgcctcaagatattgggaaactggtgaaggtagaagttttgcggctaaggtcttgtacagacttggtaaaactcccatgctcagttaaagacctaaagagattagaatttcttgacatatctgattgcttcagcattgtggagttgcctgaagacattggtgagctgagcagtttaagaaagatcaacatgagacaatgctctagattgcaagagctccccttatcaattctggatcttcagaaactagaggaagtgatatgcgatgaagagacagcagggctgtgggaacccttctcatccggactttgcaacggagtattaaagcaagtcaaagaagaattcagcctagattggctccaaaagtttcaatattga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
NB-ARC RPW8

Protein Analysis

522

Amino Acids

59.59

Weight (kDa)

6.02

Isoelectric Point (pI)

38.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 889
AccI GTMKAC 1 cut(s) 600
AccII CGCG 1 cut(s) 216
AccIII TCCGGA 1 cut(s) 1493
AciI CCGC 3 cut(s) 106, 216, 1234
AclI AACGTT 1 cut(s) 734
AclWI GGATC 1 cut(s) 1434
AcoI YGGCCR 1 cut(s) 462
AcsI RAATTY 8 cut(s) 7, 396, 790, 821, 1056, 1075, 1298, 1532
AcuI CTGAAG 6 cut(s) 312, 866, 947, 1306, 1362, 1415
AfaI GTAC 1 cut(s) 1249
AfiI CCNNNNNNNGG 4 cut(s) 50, 112, 173, 499
AflIII ACRYGT 1 cut(s) 474
AjnI CCWGG 1 cut(s) 120
Alw21I GWGCWC 2 cut(s) 1134, 1410
Alw26I GTCTC 6 cut(s) 281, 449, 521, 648, 1378, 1457
AlwI GGATC 1 cut(s) 1434
AlwNI CAGNNNCTG 1 cut(s) 407
Aor13HI TCCGGA 1 cut(s) 1493
AoxI GGCC 1 cut(s) 462
ApeKI GCWGC 2 cut(s) 404, 407
ApoI RAATTY 8 cut(s) 7, 396, 790, 821, 1056, 1075, 1298, 1532
Asp700I GAANNNNTTC 1 cut(s) 297
AspLEI GCGC 1 cut(s) 166
AsuHPI GGTGA 9 cut(s) 34, 278, 559, 893, 1040, 1126, 1159, 1228, 1364
AxyI CCTNAGG 1 cut(s) 1125
BalI TGGCCA 1 cut(s) 464
BanII GRGCYC 2 cut(s) 1134, 1410
BbsI GAAGAC 1 cut(s) 1350
Bbv12I GWGCWC 2 cut(s) 1134, 1410
BbvI GCAGC 2 cut(s) 394, 416
BccI CCATC 2 cut(s) 122, 725
BciT130I CCWGG 1 cut(s) 122
BclI TGATCA 1 cut(s) 636
BcoDI GTCTC 6 cut(s) 281, 449, 521, 648, 1378, 1457
BfaI CTAG 8 cut(s) 150, 614, 764, 782, 941, 1395, 1439, 1541
BfmI CTRYAG 1 cut(s) 550
BfoI RGCGCY 1 cut(s) 167
BfuAI ACCTGC 1 cut(s) 889
BglII AGATCT 1 cut(s) 1002
BisI GCNGC 3 cut(s) 405, 408, 1235
BlpI GCTNAGC 1 cut(s) 1358
BlsI GCNGC 3 cut(s) 406, 409, 1236
Bme1390I CCNGG 1 cut(s) 122
BmiI GGNNCC 2 cut(s) 1482, 1550
BmrFI CCNGG 1 cut(s) 122
BmsI GCATC 5 cut(s) 79, 125, 313, 697, 982
BpiI GAAGAC 1 cut(s) 1350
Bpu10I CCTNAGC 1 cut(s) 1238
Bpu1102I GCTNAGC 1 cut(s) 1358
BpuEI CTTGAG 1 cut(s) 1182
BsaI GGTCTC 1 cut(s) 449
BsaJI CCNNGG 4 cut(s) 120, 121, 370, 649
BsaWI WCCGGW 1 cut(s) 1493
Bsc4I CCNNNNNNNGG 4 cut(s) 50, 112, 173, 499
Bse1I ACTGG 2 cut(s) 912, 1218
Bse21I CCTNAGG 1 cut(s) 1125
Bse3DI GCAATG 3 cut(s) 99, 1067, 1111
BseAI TCCGGA 1 cut(s) 1493
BseBI CCWGG 1 cut(s) 122
BseDI CCNNGG 4 cut(s) 120, 121, 370, 649
BseGI GGATG 4 cut(s) 116, 337, 973, 1490
BseLI CCNNNNNNNGG 4 cut(s) 50, 112, 173, 499
BseMI GCAATG 3 cut(s) 99, 1067, 1111
BseMII CTCAG 7 cut(s) 69, 276, 598, 1116, 1151, 1287, 1349
BseNI ACTGG 2 cut(s) 912, 1218
BseRI GAGGAG 2 cut(s) 712, 1142
BseXI GCAGC 2 cut(s) 394, 416
BsgI GTGCAG 1 cut(s) 1039
Bsh1236I CGCG 1 cut(s) 216
BshFI GGCC 1 cut(s) 464
BsiHKAI GWGCWC 2 cut(s) 1134, 1410
BsiSI CCGG 1 cut(s) 1494
BslI CCNNNNNNNGG 4 cut(s) 50, 112, 173, 499
BsmAI GTCTC 6 cut(s) 281, 449, 521, 648, 1378, 1457
BsnI GGCC 1 cut(s) 464
Bso31I GGTCTC 1 cut(s) 449
Bsp1286I GDGCHC 2 cut(s) 1134, 1410
Bsp13I TCCGGA 1 cut(s) 1493
Bsp1407I TGTACA 1 cut(s) 1247
Bsp143I GATC 6 cut(s) 32, 505, 636, 1002, 1374, 1426
Bsp1720I GCTNAGC 1 cut(s) 1358
BspACI CCGC 3 cut(s) 106, 216, 1234
BspANI GGCC 1 cut(s) 464
BspCNI CTCAG 7 cut(s) 68, 277, 597, 1117, 1152, 1286, 1350
BspEI TCCGGA 1 cut(s) 1493
BspFNI CGCG 1 cut(s) 216
BspLI GGNNCC 2 cut(s) 1482, 1550
BspMI ACCTGC 1 cut(s) 889
BspPI GGATC 1 cut(s) 1434
BspTNI GGTCTC 1 cut(s) 449
BsrDI GCAATG 3 cut(s) 99, 1067, 1111
BsrGI TGTACA 1 cut(s) 1247
BsrI ACTGG 2 cut(s) 912, 1218
BssECI CCNNGG 4 cut(s) 120, 121, 370, 649
BssMI GATC 6 cut(s) 32, 505, 636, 1002, 1374, 1426
BssT1I CCWWGG 1 cut(s) 370
Bst2UI CCWGG 1 cut(s) 122
Bst4CI ACNGT 6 cut(s) 39, 532, 554, 650, 984, 1175
Bst6I CTCTTC 3 cut(s) 923, 983, 1455
BstAUI TGTACA 1 cut(s) 1247
BstC8I GCNNGC 1 cut(s) 594
BstDSI CCRYGG 1 cut(s) 649
BstF5I GGATG 4 cut(s) 116, 337, 973, 1490
BstFNI CGCG 1 cut(s) 216
BstH2I RGCGCY 1 cut(s) 167
BstHHI GCGC 1 cut(s) 166
BstKTI GATC 6 cut(s) 35, 508, 639, 1005, 1377, 1429
BstMAI GTCTC 6 cut(s) 281, 449, 521, 648, 1378, 1457
BstMBI GATC 6 cut(s) 32, 505, 636, 1002, 1374, 1426
BstMWI GCNNNNNNNGC 2 cut(s) 589, 1129
BstNI CCWGG 1 cut(s) 122
BstSCI CCNGG 1 cut(s) 120
BstSFI CTRYAG 1 cut(s) 550
BstUI CGCG 1 cut(s) 216
BstV1I GCAGC 2 cut(s) 394, 416
BstV2I GAAGAC 1 cut(s) 1350
BstX2I RGATCY 2 cut(s) 1002, 1426
BstYI RGATCY 2 cut(s) 1002, 1426
Bsu36I CCTNAGG 1 cut(s) 1125
BsuRI GGCC 1 cut(s) 464
BtgI CCRYGG 1 cut(s) 649
BtgZI GCGATG 1 cut(s) 1470
BtsCI GGATG 4 cut(s) 116, 337, 973, 1490
BtsIMutI CAGTG 2 cut(s) 537, 559
BveI ACCTGC 1 cut(s) 889
Cac8I GCNNGC 1 cut(s) 594
CaiI CAGNNNCTG 1 cut(s) 407
CfoI GCGC 1 cut(s) 166
Csp6I GTAC 1 cut(s) 1248
CspCI CAANNNNNGTGG 2 cut(s) 177, 212
CviAII CATG 6 cut(s) 255, 575, 869, 1015, 1269, 1381
CviQI GTAC 1 cut(s) 1248
DpnI GATC 6 cut(s) 34, 507, 638, 1004, 1376, 1428
DpnII GATC 6 cut(s) 32, 505, 636, 1002, 1374, 1426
DraI TTTAAA 1 cut(s) 996
EaeI YGGCCR 1 cut(s) 462
Eam1104I CTCTTC 3 cut(s) 923, 983, 1455
EarI CTCTTC 3 cut(s) 923, 983, 1455
EciI GGCGGA 1 cut(s) 95
Ecl136II GAGCTC 2 cut(s) 1132, 1408
Eco130I CCWWGG 1 cut(s) 370
Eco24I GRGCYC 2 cut(s) 1134, 1410
Eco31I GGTCTC 1 cut(s) 449
Eco32I GATATC 1 cut(s) 179
Eco53kI GAGCTC 2 cut(s) 1132, 1408
Eco57I CTGAAG 6 cut(s) 312, 866, 947, 1306, 1362, 1415
Eco81I CCTNAGG 1 cut(s) 1125
EcoICRI GAGCTC 2 cut(s) 1132, 1408
EcoRI GAATTC 2 cut(s) 396, 1532
EcoRII CCWGG 1 cut(s) 120
EcoRV GATATC 1 cut(s) 179
EcoT14I CCWWGG 1 cut(s) 370
EcoT22I ATGCAT 1 cut(s) 1069
EcoT38I GRGCYC 2 cut(s) 1134, 1410
ErhI CCWWGG 1 cut(s) 370
FaeI CATG 6 cut(s) 258, 578, 872, 1018, 1272, 1384
FalI AAGNNNNNCTT 2 cut(s) 285, 317
FatI CATG 6 cut(s) 254, 574, 868, 1014, 1268, 1380
FbaI TGATCA 1 cut(s) 636
FblI GTMKAC 1 cut(s) 600
Fnu4HI GCNGC 3 cut(s) 405, 408, 1235
FokI GGATG 4 cut(s) 103, 344, 960, 1477
FriOI GRGCYC 2 cut(s) 1134, 1410
Fsp4HI GCNGC 3 cut(s) 405, 408, 1235
FspBI CTAG 8 cut(s) 150, 614, 764, 782, 941, 1395, 1439, 1541
GlaI GCGC 1 cut(s) 165
GluI GCNGC 3 cut(s) 405, 408, 1235
HaeII RGCGCY 1 cut(s) 167
HaeIII GGCC 1 cut(s) 464
HapII CCGG 1 cut(s) 1494
HhaI GCGC 1 cut(s) 166
Hin1II CATG 6 cut(s) 258, 578, 872, 1018, 1272, 1384
Hin6I GCGC 1 cut(s) 164
HinP1I GCGC 1 cut(s) 164
HindIII AAGCTT 2 cut(s) 342, 1032
HinfI GANTC 6 cut(s) 16, 97, 269, 281, 911, 933
HpaII CCGG 1 cut(s) 1494
HphI GGTGA 9 cut(s) 34, 278, 559, 893, 1040, 1126, 1159, 1228, 1364
Hpy166II GTNNAC 2 cut(s) 557, 601
Hpy188I TCNGA 9 cut(s) 286, 414, 587, 727, 846, 927, 938, 1315, 1434
Hpy8I GTNNAC 2 cut(s) 557, 601
HpyAV CCTTC 8 cut(s) 317, 434, 517, 841, 969, 1060, 1213, 1495
HpyCH4III ACNGT 6 cut(s) 39, 532, 554, 650, 984, 1175
HpyCH4IV ACGT 2 cut(s) 474, 734
HpyCH4V TGCA 8 cut(s) 92, 188, 1020, 1067, 1104, 1137, 1402, 1503
HpyF10VI GCNNNNNNNGC 2 cut(s) 589, 1129
HpySE526I ACGT 2 cut(s) 474, 734
Hsp92II CATG 6 cut(s) 258, 578, 872, 1018, 1272, 1384
HspAI GCGC 1 cut(s) 164
Kpn2I TCCGGA 1 cut(s) 1493
Ksp22I TGATCA 1 cut(s) 636
Kzo9I GATC 6 cut(s) 32, 505, 636, 1002, 1374, 1426
LmnI GCTCC 4 cut(s) 1052, 1129, 1413, 1554
Lsp1109I GCAGC 2 cut(s) 394, 416
LweI GCATC 5 cut(s) 79, 125, 313, 697, 982
MaeI CTAG 8 cut(s) 150, 614, 764, 782, 941, 1395, 1439, 1541
MaeII ACGT 2 cut(s) 474, 734
MaeIII GTNAC 4 cut(s) 22, 514, 565, 859
MalI GATC 6 cut(s) 34, 507, 638, 1004, 1376, 1428
MboI GATC 6 cut(s) 32, 505, 636, 1002, 1374, 1426
MboII GAAGA 8 cut(s) 293, 940, 1000, 1012, 1355, 1421, 1472, 1541
MfeI CAATTG 1 cut(s) 1042
MflI RGATCY 2 cut(s) 1002, 1426
MhlI GDGCHC 2 cut(s) 1134, 1410
MlsI TGGCCA 1 cut(s) 464
MluNI TGGCCA 1 cut(s) 464
MlyI GAGTC 2 cut(s) 91, 905
MmeI TCCRAC 1 cut(s) 181
MnlI CCTC 8 cut(s) 529, 714, 733, 769, 1075, 1120, 1206, 1435
Mox20I TGGCCA 1 cut(s) 464
Mph1103I ATGCAT 1 cut(s) 1069
MroI TCCGGA 1 cut(s) 1493
MroXI GAANNNNTTC 1 cut(s) 297
MscI TGGCCA 1 cut(s) 464
MseI TTAA 7 cut(s) 192, 699, 840, 995, 1278, 1367, 1514
MslI CAYNNNNRTG 1 cut(s) 253
Msp20I TGGCCA 1 cut(s) 464
MspA1I CMGCKG 1 cut(s) 407
MspI CCGG 1 cut(s) 1494
MspR9I CCNGG 1 cut(s) 122
MunI CAATTG 1 cut(s) 1042
MvaI CCWGG 1 cut(s) 122
MvnI CGCG 1 cut(s) 216
MwoI GCNNNNNNNGC 2 cut(s) 589, 1129
NdeII GATC 6 cut(s) 32, 505, 636, 1002, 1374, 1426
NlaIII CATG 6 cut(s) 258, 578, 872, 1018, 1272, 1384
NlaIV GGNNCC 2 cut(s) 1482, 1550
NmuCI GTSAC 4 cut(s) 22, 514, 565, 859
NsiI ATGCAT 1 cut(s) 1069
PasI CCCWGGG 1 cut(s) 121
PdmI GAANNNNTTC 1 cut(s) 297
PfeI GAWTC 4 cut(s) 16, 269, 281, 933
PkrI GCNGC 3 cut(s) 406, 409, 1236
PleI GAGTC 2 cut(s) 91, 905
PpsI GAGTC 2 cut(s) 91, 905
Psp124BI GAGCTC 2 cut(s) 1134, 1410
Psp1406I AACGTT 1 cut(s) 734
Psp6I CCWGG 1 cut(s) 120
PspGI CCWGG 1 cut(s) 120
PspN4I GGNNCC 2 cut(s) 1482, 1550
PstNI CAGNNNCTG 1 cut(s) 407
PsuI RGATCY 2 cut(s) 1002, 1426
PvuII CAGCTG 1 cut(s) 407
RsaI GTAC 1 cut(s) 1249
RsaNI GTAC 1 cut(s) 1248
RseI CAYNNNNRTG 1 cut(s) 253
SacI GAGCTC 2 cut(s) 1134, 1410
SaqAI TTAA 7 cut(s) 192, 699, 840, 995, 1278, 1367, 1514
SatI GCNGC 3 cut(s) 405, 408, 1235
Sau3AI GATC 6 cut(s) 32, 505, 636, 1002, 1374, 1426
SchI GAGTC 2 cut(s) 91, 905
ScrFI CCNGG 1 cut(s) 122
SduI GDGCHC 2 cut(s) 1134, 1410
SfaNI GCATC 5 cut(s) 79, 125, 313, 697, 982
SfcI CTRYAG 1 cut(s) 550
SmiMI CAYNNNNRTG 1 cut(s) 253
SmlI CTYRAG 1 cut(s) 1197
SmoI CTYRAG 1 cut(s) 1197
SsiI CCGC 3 cut(s) 106, 216, 1234
SspI AATATT 2 cut(s) 1093, 1565
SspMI CTAG 8 cut(s) 150, 614, 764, 782, 941, 1395, 1439, 1541
SstI GAGCTC 2 cut(s) 1134, 1410
StyD4I CCNGG 1 cut(s) 120
StyI CCWWGG 1 cut(s) 370
TaaI ACNGT 6 cut(s) 39, 532, 554, 650, 984, 1175
TaiI ACGT 2 cut(s) 477, 737
TaqI TCGA 2 cut(s) 447, 740
TatI WGTACW 1 cut(s) 1247
TauI GCSGC 1 cut(s) 1237
TfiI GAWTC 4 cut(s) 16, 269, 281, 933
Tru1I TTAA 7 cut(s) 192, 699, 840, 995, 1278, 1367, 1514
Tru9I TTAA 7 cut(s) 192, 699, 840, 995, 1278, 1367, 1514
TscAI CASTG 2 cut(s) 537, 559
TseFI GTSAC 4 cut(s) 22, 514, 565, 859
TseI GCWGC 2 cut(s) 404, 407
Tsp45I GTSAC 4 cut(s) 22, 514, 565, 859
TspDTI ATGAA 8 cut(s) 337, 348, 366, 453, 744, 865, 1003, 1473
TspGWI ACGGA 1 cut(s) 1521
TspRI CASTG 2 cut(s) 537, 559
XapI RAATTY 8 cut(s) 7, 396, 790, 821, 1056, 1075, 1298, 1532
XbaI TCTAGA 1 cut(s) 1394
XcmI CCANNNNNNNNNTGG 1 cut(s) 496
XmiI GTMKAC 1 cut(s) 600
XmnI GAANNNNTTC 1 cut(s) 297
XspI CTAG 8 cut(s) 150, 614, 764, 782, 941, 1395, 1439, 1541
Zsp2I ATGCAT 1 cut(s) 1069
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.