Rroxscaffold_1G00049350

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Reverse (-)
69520974 .. 69524023
3050 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00049350.1

Sequence Viewer

Length: 1065 bp
ATGTGGGAAGAGTTGTACGATCTGAATGACGATACAGATACGTGGTGCATGGCAAACCTTTATGAACTCAGCAATCGGAGTTTAGTTAATATTCTGGACAGAAGGAGTATAAAGATGAAGAGGGATACATTCTACGGTCACCACTTTTTTATCCAGCATAGTATACTTAGAGAGCTGGCTATCTACAACTCTAAACAAGTCCCGGTACAGGATAGAAAACGAATGATTATAGACACATCTGGAGATAATCTCATTCCCAAGTGGTGGAGGGAACAGAAGCATCAAACCATCAAGGCTCGCCTATTATCCATCACAACAGATCAAAATTTCTCAGCAAATTGGCCCAGCATGCGACTACCAGAAGTAGAGGTTCTAGTATTAAACTTGCAGAAGAATGGCAAATGGGACTTACCTGAAATTCTGGAGAAAATGGATAAACTGAAGGTACTGATAGTCACATGTGATTATTTGTTCCGTGCGCAATTAAACAATTTTCAACTCCTGAGTTCCTTGGCGTATGTAAAGAGAATCCGATTAGAGGGCATTTTAATTTCTTCAATATTTAACAATCCCATGCAATTGAAGAGTCTACAGAAGATATCATTATGCAAGTGTGGCATTAACGCTGGAGCGTTCAGCAACATGGTAGATGCATTTCCAAATATACAGGAAATGAACCTTGAGCATTGCAATGGATTCAAGGAATTAGCTGTAAAGCTCTGTGATCTGATTCATTTAAAGAAGCTCAGTATCACCAACTGTAAAGGGTTATCTAGGTTGCCTAGAAGGATTGGAAAGTTGGAGAATTTAGAACTACTGAGGCTAAGGGCATGTTATGGGTTGTTGAACTTACCCCGCTCGATTAGGAATCTCAAAAATTTGAAATATTTTGACATTTGCGATTGCTACAGGATTGCGGCGTTGCCAGAGTACATTGGTGAAATGAAGAGTCTAAAGAAGTTTGACATAAGATATTGCCTGTCACTAAAAACGCTGCCTCAGTCAATTTCGGAACTTGAGCAGTTGAAGGAAGTATTGTGTGATGCCCTTACGCAAAAATTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

354

Amino Acids

41.39

Weight (kDa)

9.14

Isoelectric Point (pI)

37.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 215 - 344 1.7e-15 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 480
AccB7I CCANNNNNTGG 1 cut(s) 264
AccBSI CCGCTC 1 cut(s) 858
AccI GTMKAC 2 cut(s) 163, 589
AciI CCGC 2 cut(s) 856, 917
AcsI RAATTY 4 cut(s) 325, 417, 805, 877
AcuI CTGAAG 1 cut(s) 461
AfaI GTAC 4 cut(s) 17, 207, 447, 932
AfiI CCNNNNNNNGG 3 cut(s) 208, 264, 538
AflIII ACRYGT 1 cut(s) 458
AgsI TTSAA 7 cut(s) 497, 558, 583, 700, 847, 883, 1027
AluBI AGCT 4 cut(s) 175, 710, 718, 745
AluI AGCT 4 cut(s) 175, 710, 718, 745
AoxI GGCC 1 cut(s) 341
ApeKI GCWGC 1 cut(s) 994
ApoI RAATTY 4 cut(s) 325, 417, 805, 877
AspLEI GCGC 1 cut(s) 481
AspS9I GGNCC 1 cut(s) 342
AsuC2I CCSGG 1 cut(s) 203
AsuHPI GGTGA 3 cut(s) 131, 745, 950
BbvI GCAGC 1 cut(s) 981
BccI CCATC 2 cut(s) 296, 317
BciVI GTATCC 1 cut(s) 118
BcnI CCSGG 1 cut(s) 203
BfaI CTAG 3 cut(s) 374, 774, 783
BfmI CTRYAG 2 cut(s) 590, 907
BfuI GTATCC 1 cut(s) 118
BisI GCNGC 2 cut(s) 918, 995
BlsI GCNGC 2 cut(s) 919, 996
Bme1390I CCNGG 1 cut(s) 203
BmgT120I GGNCC 1 cut(s) 342
BmrFI CCNGG 1 cut(s) 203
BmsI GCATC 3 cut(s) 289, 640, 1033
BplI GAGNNNNNCTC 2 cut(s) 234, 266
BpmI CTGGAG 3 cut(s) 261, 443, 648
Bpu10I CCTNAGC 1 cut(s) 824
BpuEI CTTGAG 2 cut(s) 701, 1037
BpuMI CCSGG 1 cut(s) 203
BsaAI YACGTR 1 cut(s) 42
BsaJI CCNNGG 1 cut(s) 510
Bsc4I CCNNNNNNNGG 3 cut(s) 208, 264, 538
Bse3DI GCAATG 2 cut(s) 685, 697
BseDI CCNNGG 1 cut(s) 510
BseLI CCNNNNNNNGG 3 cut(s) 208, 264, 538
BseMI GCAATG 2 cut(s) 685, 697
BseMII CTCAG 6 cut(s) 82, 345, 494, 760, 809, 1013
BseXI GCAGC 1 cut(s) 981
BseYI CCCAGC 1 cut(s) 344
BshFI GGCC 1 cut(s) 343
BsiSI CCGG 1 cut(s) 203
BslFI GGGAC 2 cut(s) 185, 419
BslI CCNNNNNNNGG 3 cut(s) 208, 264, 538
BsmFI GGGAC 2 cut(s) 185, 419
BsnI GGCC 1 cut(s) 343
Bsp143I GATC 3 cut(s) 19, 319, 724
BspACI CCGC 2 cut(s) 856, 917
BspANI GGCC 1 cut(s) 343
BspCNI CTCAG 6 cut(s) 81, 344, 495, 759, 810, 1012
BsrBI CCGCTC 1 cut(s) 858
BsrDI GCAATG 2 cut(s) 685, 697
BssECI CCNNGG 1 cut(s) 510
BssMI GATC 3 cut(s) 19, 319, 724
BssNAI GTATAC 1 cut(s) 164
BssT1I CCWWGG 1 cut(s) 510
Bst1107I GTATAC 1 cut(s) 164
Bst4CI ACNGT 2 cut(s) 137, 761
Bst6I CTCTTC 4 cut(s) 3, 113, 578, 941
BstBAI YACGTR 1 cut(s) 42
BstC8I GCNNGC 3 cut(s) 177, 298, 350
BstDEI CTNAG 8 cut(s) 68, 167, 331, 503, 746, 818, 824, 999
BstEII GGTNACC 1 cut(s) 137
BstHHI GCGC 1 cut(s) 481
BstKTI GATC 3 cut(s) 22, 322, 727
BstMBI GATC 3 cut(s) 19, 319, 724
BstMWI GCNNNNNNNGC 2 cut(s) 349, 615
BstNSI RCATGY 3 cut(s) 352, 462, 834
BstPI GGTNACC 1 cut(s) 137
BstSCI CCNGG 1 cut(s) 201
BstSFI CTRYAG 2 cut(s) 590, 907
BstV1I GCAGC 1 cut(s) 981
BstZ17I GTATAC 1 cut(s) 164
BsuI GTATCC 1 cut(s) 118
BsuRI GGCC 1 cut(s) 343
Cac8I GCNNGC 3 cut(s) 177, 298, 350
CfoI GCGC 1 cut(s) 481
Cfr13I GGNCC 1 cut(s) 342
Csp6I GTAC 4 cut(s) 16, 206, 446, 931
CviAII CATG 6 cut(s) 49, 349, 459, 574, 643, 831
CviJI RGCY 8 cut(s) 175, 179, 296, 343, 710, 718, 745, 823
CviKI_1 RGCY 8 cut(s) 175, 179, 296, 343, 710, 718, 745, 823
CviQI GTAC 4 cut(s) 16, 206, 446, 931
DdeI CTNAG 8 cut(s) 68, 167, 331, 503, 746, 818, 824, 999
DpnI GATC 3 cut(s) 21, 321, 726
DpnII GATC 3 cut(s) 19, 319, 724
DraI TTTAAA 1 cut(s) 738
Eam1104I CTCTTC 4 cut(s) 3, 113, 578, 941
EarI CTCTTC 4 cut(s) 3, 113, 578, 941
Eco130I CCWWGG 1 cut(s) 510
Eco32I GATATC 1 cut(s) 600
Eco57I CTGAAG 1 cut(s) 461
Eco91I GGTNACC 1 cut(s) 137
EcoO65I GGTNACC 1 cut(s) 137
EcoRV GATATC 1 cut(s) 600
EcoT14I CCWWGG 1 cut(s) 510
EcoT22I ATGCAT 1 cut(s) 655
ErhI CCWWGG 1 cut(s) 510
FaeI CATG 6 cut(s) 52, 352, 462, 577, 646, 834
FaqI GGGAC 2 cut(s) 185, 419
FatI CATG 6 cut(s) 48, 348, 458, 573, 642, 830
FauI CCCGC 1 cut(s) 863
FblI GTMKAC 2 cut(s) 163, 589
Fnu4HI GCNGC 2 cut(s) 918, 995
Fsp4HI GCNGC 2 cut(s) 918, 995
FspBI CTAG 3 cut(s) 374, 774, 783
FspI TGCGCA 1 cut(s) 480
GlaI GCGC 1 cut(s) 480
GluI GCNGC 2 cut(s) 918, 995
GsaI CCCAGC 1 cut(s) 348
GsuI CTGGAG 3 cut(s) 261, 443, 648
HaeIII GGCC 1 cut(s) 343
HapII CCGG 1 cut(s) 203
HhaI GCGC 1 cut(s) 481
Hin1II CATG 6 cut(s) 52, 352, 462, 577, 646, 834
Hin6I GCGC 1 cut(s) 479
HinP1I GCGC 1 cut(s) 479
HinfI GANTC 6 cut(s) 528, 586, 696, 730, 868, 949
HpaII CCGG 1 cut(s) 203
HphI GGTGA 3 cut(s) 131, 745, 950
Hpy166II GTNNAC 2 cut(s) 164, 590
Hpy188I TCNGA 5 cut(s) 24, 78, 533, 729, 1012
Hpy188III TCNNGA 4 cut(s) 95, 240, 422, 502
Hpy8I GTNNAC 2 cut(s) 164, 590
HpyAV CCTTC 4 cut(s) 96, 436, 780, 1021
HpyCH4III ACNGT 2 cut(s) 137, 761
HpyCH4IV ACGT 1 cut(s) 41
HpyCH4V TGCA 6 cut(s) 48, 388, 577, 609, 653, 690
HpyF10VI GCNNNNNNNGC 2 cut(s) 349, 615
HpyF3I CTNAG 8 cut(s) 68, 167, 331, 503, 746, 818, 824, 999
HpySE526I ACGT 1 cut(s) 41
Hsp92II CATG 6 cut(s) 52, 352, 462, 577, 646, 834
HspAI GCGC 1 cut(s) 479
Kzo9I GATC 3 cut(s) 19, 319, 724
LmnI GCTCC 1 cut(s) 629
Lsp1109I GCAGC 1 cut(s) 981
LweI GCATC 3 cut(s) 289, 640, 1033
MaeI CTAG 3 cut(s) 374, 774, 783
MaeII ACGT 1 cut(s) 41
MaeIII GTNAC 3 cut(s) 137, 454, 981
MalI GATC 3 cut(s) 21, 321, 726
MbiI CCGCTC 1 cut(s) 858
MboI GATC 3 cut(s) 19, 319, 724
MboII GAAGA 7 cut(s) 20, 130, 403, 546, 595, 607, 958
MfeI CAATTG 1 cut(s) 578
MlyI GAGTC 2 cut(s) 595, 958
MmeI TCCRAC 1 cut(s) 780
MnlI CCTC 6 cut(s) 114, 261, 361, 532, 813, 1008
Mph1103I ATGCAT 1 cut(s) 655
MseI TTAA 7 cut(s) 87, 380, 485, 548, 564, 621, 737
MslI CAYNNNNRTG 1 cut(s) 690
MspI CCGG 1 cut(s) 203
MspR9I CCNGG 1 cut(s) 203
MunI CAATTG 1 cut(s) 578
MwoI GCNNNNNNNGC 2 cut(s) 349, 615
NciI CCSGG 1 cut(s) 203
NdeII GATC 3 cut(s) 19, 319, 724
NlaIII CATG 6 cut(s) 52, 352, 462, 577, 646, 834
NmuCI GTSAC 3 cut(s) 137, 454, 981
NsbI TGCGCA 1 cut(s) 480
NsiI ATGCAT 1 cut(s) 655
NspI RCATGY 3 cut(s) 352, 462, 834
PaeI GCATGC 1 cut(s) 352
PciI ACATGT 1 cut(s) 458
PfeI GAWTC 4 cut(s) 528, 696, 730, 868
PflMI CCANNNNNTGG 1 cut(s) 264
PkrI GCNGC 2 cut(s) 919, 996
PleI GAGTC 2 cut(s) 594, 957
PpsI GAGTC 2 cut(s) 594, 957
Ppu21I YACGTR 1 cut(s) 42
PscI ACATGT 1 cut(s) 458
PspEI GGTNACC 1 cut(s) 137
PspFI CCCAGC 1 cut(s) 344
PspPI GGNCC 1 cut(s) 342
RsaI GTAC 4 cut(s) 17, 207, 447, 932
RsaNI GTAC 4 cut(s) 16, 206, 446, 931
RseI CAYNNNNRTG 1 cut(s) 690
SaqAI TTAA 7 cut(s) 87, 380, 485, 548, 564, 621, 737
SatI GCNGC 2 cut(s) 918, 995
Sau3AI GATC 3 cut(s) 19, 319, 724
Sau96I GGNCC 1 cut(s) 342
SchI GAGTC 2 cut(s) 595, 958
ScrFI CCNGG 1 cut(s) 203
SfaNI GCATC 3 cut(s) 289, 640, 1033
SfcI CTRYAG 2 cut(s) 590, 907
SmiMI CAYNNNNRTG 1 cut(s) 690
SmlI CTYRAG 2 cut(s) 680, 1016
SmoI CTYRAG 2 cut(s) 680, 1016
SphI GCATGC 1 cut(s) 352
SsiI CCGC 2 cut(s) 856, 917
SspI AATATT 3 cut(s) 91, 561, 887
SspMI CTAG 3 cut(s) 374, 774, 783
StyD4I CCNGG 1 cut(s) 201
StyI CCWWGG 1 cut(s) 510
TaaI ACNGT 2 cut(s) 137, 761
TaiI ACGT 1 cut(s) 44
TaqI TCGA 1 cut(s) 860
TatI WGTACW 1 cut(s) 930
TauI GCSGC 1 cut(s) 920
TfiI GAWTC 4 cut(s) 528, 696, 730, 868
Tru1I TTAA 7 cut(s) 87, 380, 485, 548, 564, 621, 737
Tru9I TTAA 7 cut(s) 87, 380, 485, 548, 564, 621, 737
TseFI GTSAC 3 cut(s) 137, 454, 981
TseI GCWGC 1 cut(s) 994
Tsp45I GTSAC 3 cut(s) 137, 454, 981
TspDTI ATGAA 5 cut(s) 78, 131, 689, 722, 959
TspGWI ACGGA 1 cut(s) 464
Van91I CCANNNNNTGG 1 cut(s) 264
XapI RAATTY 4 cut(s) 325, 417, 805, 877
XceI RCATGY 3 cut(s) 352, 462, 834
XmiI GTMKAC 2 cut(s) 163, 589
XspI CTAG 3 cut(s) 374, 774, 783
Zsp2I ATGCAT 1 cut(s) 655
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.