RchiOBHm_Chr3g0473971

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
OG0000039
Physical Location & Seq
Reverse (-)
19721919 .. 19724499
2581 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ43962

Sequence Viewer

Length: 1560 bp
ATGAAGAAGTCGGGGTCACTTGTTGGAGGTGCTGTTCTAGGAACGGTATTCAATGCTTTGTATGAAGGCCTTAAACATCTGATTCACAAGAATCACATATTTAAAGCGTTCTTCAAGGACATGAAATCCAGTCTAGACCACTTACGGCCACTGATCCAACAGATTGTTGAATGCAACGACAAGCTAATTTACTGCTCCAAGGAGGAACTAGAAGGTTTAGAAGAAGTGATCAAGGAAGGCGGGCAGCTGGTCGAAAAGTGCTTGAAGGTTAGCCGGTGGAAGCACTTAAAAAAGTACAAATACGCCAGAAAGCTTCTTGAATGGGACGAATCTCTTAAAATGCAGTTAGTTATACTCAAGGTCCAGGAATCAAGGGATGTGAAGAAGATCGCAGTTGAGTTAGATAATCTAGCAATCAAGGTGGATCATATGAATGATATGATACAAAATCAATCTGCTGGAAGTTCATCAAGTCATGCAGCACTTGAACTTCCACCGCTTCCTGACCTTATAGTTGGATTGGAAGTTCCTTTAATGGAGTTGAAGCGAAAGCTTCTTACTGATGATGGTGAGTCAATGCTTGTGCTGACTGCTCCCGGAGGATGCGGGAAGACTACTCTAGCTAAAAAGTTTTGTCAAGATCAACAAGTCAAAGAACAAGTAGGTCGGTGGCTGCAAAGATATTTTGTGGAAAAAAGACATCATCCTATACTATTGGTCCTGGATGATGTTTGGTCGGGATCTGAATCCATTGTTGGGCACTTTCATTTTGAAATGTCGAATTACAAGATTTTAGTAACATCAAGATCTGAATTTCCATGGTTCGCTTCTTCATATCATTTAAAACTATTGGACGAACATAATGCTATGAAACTTTTTCATCACTATGCGTCATTGGGAGACGGAAGCTCCCTCATCAAAGAAGAACTTTCAAGAAAGATAGTACAGCGATGTAACGGATTTCCACTTGCCATTACAATTGTGGGAAGATCACTGTGTGAAAAACCTATAGAGTTTTGGAGAAAAACAGAAGCTGAATGGGCGAAAGGTTCCTCTATTCTTGATACTGAGACCAAATTGTTTCTTTGCCTGCAAAGCAGCTTAGATGCCTTAGATGAAGATATGGCCCTTGTCAAGGAATGTTTCTTCGACCTAGGTTCATTTCCTGAAGATTATCAAATCCCTCTTGCTACCCTCTTTGATATGTGGGTGGAGTTACATGGGCTAGATGAACACAGTAAGTGCATTGCAAACGTCTATGAACTCAGGACTCGGACATTGGCTAACCTTATAGATCACAGAGAGATGAAGATGGAGGGGGACGACTTCTATGATGAACGCTTTCTTACCCAACATGATTTGCTTAGAGAGCTAGCAATTTACCATGCTAAACTAGAACCAGTAGAGCGTAGAAAAAGAGTAATCATAGAGATATGTGGAAACGATCTTCCTAAATGGTGGAGGGAACGAAAGTATCAACCAATGAAAGCTCGTCTATTGTCTATCTCAACTGATAGGGGTTCTCAATGGAATGGCCCAACATGCAAGTGCCAGAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
NB-ARC RPW8

Protein Analysis

519

Amino Acids

59.92

Weight (kDa)

6.86

Isoelectric Point (pI)

40.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RPW8 PF05659 6 - 142 2.4e-28 Arabidopsis broad-spectrum mildew resistance protein RPW8
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 240, 497, 606
AclWI GGATC 3 cut(s) 148, 432, 748
AcoI YGGCCR 1 cut(s) 146
AcsI RAATTY 1 cut(s) 812
AcuI CTGAAG 1 cut(s) 1188
AdeI CACNNNGTG 1 cut(s) 998
AfaI GTAC 2 cut(s) 296, 945
AfiI CCNNNNNNNGG 2 cut(s) 756, 1135
AgsI TTSAA 9 cut(s) 52, 115, 170, 265, 320, 488, 544, 773, 933
AjnI CCWGG 2 cut(s) 363, 720
AjuI GAANNNNNNNTTGG 2 cut(s) 738, 770
AloI GAACNNNNNNTCC 4 cut(s) 18, 50, 510, 542
Alw26I GTCTC 2 cut(s) 894, 1064
AlwI GGATC 3 cut(s) 148, 432, 748
AlwNI CAGNNNCTG 1 cut(s) 1034
AoxI GGCC 4 cut(s) 67, 146, 1125, 1534
ApeKI GCWGC 4 cut(s) 244, 479, 673, 1098
ApoI RAATTY 1 cut(s) 812
Asp700I GAANNNNTTC 1 cut(s) 1341
AspA2I CCTAGG 1 cut(s) 1153
AspS9I GGNCC 4 cut(s) 361, 718, 1126, 1535
AsuC2I CCSGG 1 cut(s) 597
AsuHPI GGTGA 1 cut(s) 581
AsuNHI GCTAGC 1 cut(s) 1372
AvaII GGWCC 2 cut(s) 361, 718
AvrII CCTAGG 1 cut(s) 1153
BaeGI GKGCMC 1 cut(s) 762
BaeI ACNNNNGTAYC 2 cut(s) 1457, 1490
BbsI GAAGAC 1 cut(s) 617
BbvI GCAGC 4 cut(s) 256, 491, 660, 1110
BccI CCATC 2 cut(s) 560, 1306
BceAI ACGGC 1 cut(s) 161
BcgI CGANNNNNNTGC 2 cut(s) 845, 879
BciT130I CCWGG 2 cut(s) 365, 722
BclI TGATCA 1 cut(s) 228
BcnI CCSGG 1 cut(s) 597
BcoDI GTCTC 2 cut(s) 894, 1064
BfaI CTAG 9 cut(s) 38, 134, 209, 410, 620, 1154, 1226, 1373, 1394
BfmI CTRYAG 1 cut(s) 1008
BglII AGATCT 1 cut(s) 806
BisI GCNGC 4 cut(s) 245, 480, 674, 1099
BlnI CCTAGG 1 cut(s) 1153
BlsI GCNGC 4 cut(s) 246, 481, 675, 1100
Bme1390I CCNGG 3 cut(s) 365, 597, 722
Bme18I GGWCC 2 cut(s) 361, 718
BmgT120I GGNCC 4 cut(s) 361, 718, 1126, 1535
BmiI GGNNCC 1 cut(s) 1051
BmrFI CCNGG 3 cut(s) 365, 597, 722
BmsI GCATC 2 cut(s) 593, 1096
BmtI GCTAGC 1 cut(s) 1376
BpiI GAAGAC 1 cut(s) 617
BpuEI CTTGAG 1 cut(s) 341
BpuMI CCSGG 1 cut(s) 597
BsaBI GATNNNNATC 1 cut(s) 745
BsaI GGTCTC 1 cut(s) 1064
BsaJI CCNNGG 3 cut(s) 198, 818, 1153
BsaXI ACNNNNNCTCC 4 cut(s) 18, 48, 893, 923
Bsc4I CCNNNNNNNGG 2 cut(s) 756, 1135
Bse118I RCCGGY 1 cut(s) 273
Bse1I ACTGG 2 cut(s) 129, 1400
Bse3DI GCAATG 1 cut(s) 1245
Bse8I GATNNNNATC 1 cut(s) 745
BseBI CCWGG 2 cut(s) 365, 722
BseDI CCNNGG 3 cut(s) 198, 818, 1153
BseGI GGATG 4 cut(s) 382, 608, 703, 730
BseJI GATNNNNATC 1 cut(s) 745
BseLI CCNNNNNNNGG 2 cut(s) 756, 1135
BseMI GCAATG 1 cut(s) 1245
BseMII CTCAG 2 cut(s) 1059, 1279
BseNI ACTGG 2 cut(s) 129, 1400
BseSI GKGCMC 1 cut(s) 762
BseXI GCAGC 4 cut(s) 256, 491, 660, 1110
BshFI GGCC 4 cut(s) 69, 148, 1127, 1536
BsiSI CCGG 2 cut(s) 274, 597
BslFI GGGAC 2 cut(s) 338, 1334
BslI CCNNNNNNNGG 2 cut(s) 756, 1135
BsmAI GTCTC 2 cut(s) 894, 1064
BsmBI CGTCTC 1 cut(s) 894
BsmFI GGGAC 2 cut(s) 338, 1334
BsmI GAATGC 1 cut(s) 176
BsnI GGCC 4 cut(s) 69, 148, 1127, 1536
Bso31I GGTCTC 1 cut(s) 1064
Bsp1286I GDGCHC 1 cut(s) 762
Bsp19I CCATGG 1 cut(s) 818
BspACI CCGC 3 cut(s) 240, 497, 606
BspANI GGCC 4 cut(s) 69, 148, 1127, 1536
BspCNI CTCAG 2 cut(s) 1060, 1278
BspLI GGNNCC 1 cut(s) 1051
BspOI GCTAGC 1 cut(s) 1376
BspPI GGATC 3 cut(s) 148, 432, 748
BspTNI GGTCTC 1 cut(s) 1064
BsrDI GCAATG 1 cut(s) 1245
BsrFI RCCGGY 1 cut(s) 273
BsrI ACTGG 2 cut(s) 129, 1400
BssAI RCCGGY 1 cut(s) 273
BssECI CCNNGG 3 cut(s) 198, 818, 1153
BssT1I CCWWGG 3 cut(s) 198, 818, 1153
Bst2UI CCWGG 2 cut(s) 365, 722
Bst4CI ACNGT 3 cut(s) 46, 996, 1238
BstC8I GCNNGC 3 cut(s) 242, 1091, 1374
BstDEI CTNAG 5 cut(s) 1068, 1102, 1111, 1265, 1364
BstDSI CCRYGG 1 cut(s) 818
BstENI CCTNNNNNAGG 1 cut(s) 1133
BstF5I GGATG 4 cut(s) 382, 608, 703, 730
BstMAI GTCTC 2 cut(s) 894, 1064
BstMWI GCNNNNNNNGC 4 cut(s) 1040, 1095, 1369, 1542
BstNI CCWGG 2 cut(s) 365, 722
BstNSI RCATGY 1 cut(s) 1545
BstSCI CCNGG 3 cut(s) 363, 595, 720
BstSFI CTRYAG 1 cut(s) 1008
BstSLI GKGCMC 1 cut(s) 762
BstV1I GCAGC 4 cut(s) 256, 491, 660, 1110
BstV2I GAAGAC 1 cut(s) 617
BstX2I RGATCY 2 cut(s) 740, 806
BstYI RGATCY 2 cut(s) 740, 806
BsuRI GGCC 4 cut(s) 69, 148, 1127, 1536
BtgI CCRYGG 1 cut(s) 818
BtgZI GCGATG 1 cut(s) 964
BtsCI GGATG 4 cut(s) 382, 608, 703, 730
BtsIMutI CAGTG 2 cut(s) 149, 992
Cac8I GCNNGC 3 cut(s) 242, 1091, 1374
CaiI CAGNNNCTG 1 cut(s) 1034
Cfr10I RCCGGY 1 cut(s) 273
Cfr13I GGNCC 4 cut(s) 361, 718, 1126, 1535
CseI GACGC 1 cut(s) 879
Csp6I GTAC 2 cut(s) 295, 944
CspCI CAANNNNNGTGG 2 cut(s) 402, 437
CviAII CATG 7 cut(s) 121, 476, 819, 1220, 1355, 1385, 1542
CviQI GTAC 2 cut(s) 295, 944
DdeI CTNAG 5 cut(s) 1068, 1102, 1111, 1265, 1364
DraI TTTAAA 2 cut(s) 103, 843
DraIII CACNNNGTG 1 cut(s) 998
EaeI YGGCCR 1 cut(s) 146
Eco130I CCWWGG 3 cut(s) 198, 818, 1153
Eco147I AGGCCT 1 cut(s) 69
Eco31I GGTCTC 1 cut(s) 1064
Eco47I GGWCC 2 cut(s) 361, 718
Eco57I CTGAAG 1 cut(s) 1188
EcoNI CCTNNNNNAGG 1 cut(s) 1133
EcoRII CCWGG 2 cut(s) 363, 720
EcoT14I CCWWGG 3 cut(s) 198, 818, 1153
ErhI CCWWGG 3 cut(s) 198, 818, 1153
Esp3I CGTCTC 1 cut(s) 894
FaeI CATG 7 cut(s) 124, 479, 822, 1223, 1358, 1388, 1545
FalI AAGNNNNNCTT 2 cut(s) 912, 944
FaqI GGGAC 2 cut(s) 338, 1334
FatI CATG 7 cut(s) 120, 475, 818, 1219, 1354, 1384, 1541
FauI CCCGC 2 cut(s) 233, 599
FauNDI CATATG 1 cut(s) 429
FbaI TGATCA 1 cut(s) 228
Fnu4HI GCNGC 4 cut(s) 245, 480, 674, 1099
FokI GGATG 4 cut(s) 389, 615, 690, 737
Fsp4HI GCNGC 4 cut(s) 245, 480, 674, 1099
FspBI CTAG 9 cut(s) 38, 134, 209, 410, 620, 1154, 1226, 1373, 1394
GluI GCNGC 4 cut(s) 245, 480, 674, 1099
HaeIII GGCC 4 cut(s) 69, 148, 1127, 1536
HapII CCGG 2 cut(s) 274, 597
HgaI GACGC 1 cut(s) 879
Hin1II CATG 7 cut(s) 124, 479, 822, 1223, 1358, 1388, 1545
HindIII AAGCTT 2 cut(s) 311, 551
HinfI GANTC 7 cut(s) 82, 91, 329, 368, 572, 746, 1270
HpaII CCGG 2 cut(s) 274, 597
HphI GGTGA 1 cut(s) 581
Hpy188I TCNGA 4 cut(s) 81, 745, 811, 1275
HpyAV CCTTC 4 cut(s) 59, 206, 230, 259
HpyCH4III ACNGT 3 cut(s) 46, 996, 1238
HpyCH4IV ACGT 1 cut(s) 1254
HpyCH4V TGCA 8 cut(s) 174, 343, 479, 676, 1093, 1245, 1250, 1545
HpyF10VI GCNNNNNNNGC 4 cut(s) 1040, 1095, 1369, 1542
HpyF3I CTNAG 5 cut(s) 1068, 1102, 1111, 1265, 1364
HpySE526I ACGT 1 cut(s) 1254
Hsp92II CATG 7 cut(s) 124, 479, 822, 1223, 1358, 1388, 1545
Ksp22I TGATCA 1 cut(s) 228
LmnI GCTCC 3 cut(s) 200, 598, 914
Lsp1109I GCAGC 4 cut(s) 256, 491, 660, 1110
LweI GCATC 2 cut(s) 593, 1096
MaeI CTAG 9 cut(s) 38, 134, 209, 410, 620, 1154, 1226, 1373, 1394
MaeII ACGT 1 cut(s) 1254
MaeIII GTNAC 4 cut(s) 15, 796, 953, 1215
MfeI CAATTG 1 cut(s) 978
MflI RGATCY 2 cut(s) 740, 806
MhlI GDGCHC 1 cut(s) 762
MluCI AATT 6 cut(s) 186, 781, 812, 978, 1076, 1377
MlyI GAGTC 2 cut(s) 581, 1264
MmeI TCCRAC 3 cut(s) 4, 181, 496
MnlI CCTC 9 cut(s) 20, 196, 593, 923, 1063, 1194, 1205, 1309, 1455
MroXI GAANNNNTTC 1 cut(s) 1341
MseI TTAA 6 cut(s) 72, 102, 287, 336, 533, 842
MslI CAYNNNNRTG 3 cut(s) 432, 885, 1546
MspA1I CMGCKG 1 cut(s) 247
MspI CCGG 2 cut(s) 274, 597
MspR9I CCNGG 3 cut(s) 365, 597, 722
MunI CAATTG 1 cut(s) 978
Mva1269I GAATGC 1 cut(s) 176
MvaI CCWGG 2 cut(s) 365, 722
MwoI GCNNNNNNNGC 4 cut(s) 1040, 1095, 1369, 1542
NciI CCSGG 1 cut(s) 597
NcoI CCATGG 1 cut(s) 818
NdeI CATATG 1 cut(s) 429
NheI GCTAGC 1 cut(s) 1372
NlaIII CATG 7 cut(s) 124, 479, 822, 1223, 1358, 1388, 1545
NlaIV GGNNCC 1 cut(s) 1051
NmuCI GTSAC 1 cut(s) 15
NspI RCATGY 1 cut(s) 1545
PceI AGGCCT 1 cut(s) 69
PctI GAATGC 1 cut(s) 176
PdmI GAANNNNTTC 1 cut(s) 1341
PfeI GAWTC 5 cut(s) 82, 91, 329, 368, 746
PfoI TCCNGGA 3 cut(s) 363, 595, 720
PkrI GCNGC 4 cut(s) 246, 481, 675, 1100
PleI GAGTC 2 cut(s) 580, 1264
PpsI GAGTC 2 cut(s) 580, 1264
Psp6I CCWGG 2 cut(s) 363, 720
PspGI CCWGG 2 cut(s) 363, 720
PspN4I GGNNCC 1 cut(s) 1051
PspPI GGNCC 4 cut(s) 361, 718, 1126, 1535
PstNI CAGNNNCTG 1 cut(s) 1034
PsuI RGATCY 2 cut(s) 740, 806
PvuII CAGCTG 1 cut(s) 247
RsaI GTAC 2 cut(s) 296, 945
RsaNI GTAC 2 cut(s) 295, 944
RseI CAYNNNNRTG 3 cut(s) 432, 885, 1546
SaqAI TTAA 6 cut(s) 72, 102, 287, 336, 533, 842
SatI GCNGC 4 cut(s) 245, 480, 674, 1099
Sau96I GGNCC 4 cut(s) 361, 718, 1126, 1535
SchI GAGTC 2 cut(s) 581, 1264
ScrFI CCNGG 3 cut(s) 365, 597, 722
SduI GDGCHC 1 cut(s) 762
SfaNI GCATC 2 cut(s) 593, 1096
SfcI CTRYAG 1 cut(s) 1008
SinI GGWCC 2 cut(s) 361, 718
SmiMI CAYNNNNRTG 3 cut(s) 432, 885, 1546
SmlI CTYRAG 1 cut(s) 356
SmoI CTYRAG 1 cut(s) 356
Sse9I AATT 6 cut(s) 186, 781, 812, 978, 1076, 1377
SseBI AGGCCT 1 cut(s) 69
SsiI CCGC 3 cut(s) 240, 497, 606
SspMI CTAG 9 cut(s) 38, 134, 209, 410, 620, 1154, 1226, 1373, 1394
StuI AGGCCT 1 cut(s) 69
StyD4I CCNGG 3 cut(s) 363, 595, 720
StyI CCWWGG 3 cut(s) 198, 818, 1153
TaaI ACNGT 3 cut(s) 46, 996, 1238
TaiI ACGT 1 cut(s) 1257
TaqI TCGA 3 cut(s) 252, 779, 1149
TasI AATT 6 cut(s) 186, 781, 812, 978, 1076, 1377
TatI WGTACW 2 cut(s) 294, 943
TfiI GAWTC 5 cut(s) 82, 91, 329, 368, 746
Tru1I TTAA 6 cut(s) 72, 102, 287, 336, 533, 842
Tru9I TTAA 6 cut(s) 72, 102, 287, 336, 533, 842
TscAI CASTG 2 cut(s) 156, 999
TseFI GTSAC 1 cut(s) 15
TseI GCWGC 4 cut(s) 244, 479, 673, 1098
Tsp45I GTSAC 1 cut(s) 15
TspGWI ACGGA 2 cut(s) 918, 972
TspRI CASTG 2 cut(s) 156, 999
VpaK11BI GGWCC 2 cut(s) 361, 718
XagI CCTNNNNNAGG 1 cut(s) 1133
XapI RAATTY 1 cut(s) 812
XbaI TCTAGA 1 cut(s) 133
XceI RCATGY 1 cut(s) 1545
XcmI CCANNNNNNNNNTGG 1 cut(s) 979
XmaJI CCTAGG 1 cut(s) 1153
XmnI GAANNNNTTC 1 cut(s) 1341
XspI CTAG 9 cut(s) 38, 134, 209, 410, 620, 1154, 1226, 1373, 1394
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.