Prupe.7G138800_v2.0.a1

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0000039
Physical Location & Seq
Reverse (-)
15503122 .. 15509769
6648 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G138800.2

Sequence Viewer

Length: 2442 bp
ATGGCAGTGGATTTAGTCGGAGGGGGTACTTTTAGAGTAGCATTTCAAATGCTATTTGATGCTGTTATAGCAGTGAAGAAGGAGACTACCATGTTTAAATCCATGCTTGGAGATATCAAATCCACACTGGACTCTTTACAGCCAGTGATCAAAGAGAGAGAAAAATATGACTCAAAGGAGGGGCTAGAAAATTTTGCAATGCAAATGGAGGAGGGGGTAAAGCTTGTTTACAAATGCAGCAAGGTTGGTGTGTGGAGCTGGTGCAGAAAATACAGATACACCAGAAAGCTTGATGAATTGGATAAATGTCTTCAAAGACTAGTGGAGGTGTTGAAAGTGCAGGGCATAAGGGATGTCAAGGAGACCTTGGTTTCTTTGAGGAATATAGAGACGGTGCTGCATCGAATTGAAGGGAACTTGGTGATGCAAAACCAACCTGAAAAAATCAATGGTTGGTCTTCAGTGCCTGAACCTCCACCGGTTACAGTTGGGTTGGATGTGCCATTGAAAGAATTGAAGATAAAGCTTCTTAAGGATGATGTGTCAATGCTTGTGCTGACTGCTGCTGGTGGATGTGGGAAAACCACATTGGCAAAAAAGTTTTGTCAAGATCAGGAAGTTAAAGATAAATTCAAGAACAATATCTTCTTCGTCACTCTTTCAAAAAATCCCAACTTGGACCTTATTGTACATGAGCTATATCAACGCAAGGGTTCCCAGGTGCCTGCTTTCGAAAATGAAGTAATTGCAGTTTACTGGTTGCAACTATTTCTGAAGGAAACATCACAAAATCCTGTACTGTTTGTCCTGGATGATGTTTGGTCAGGATCAGAGTCCCTACTTGAGAAGTTTGATGAATTCAAAATGACAAATTACAAAGTTTTGGTCACATCAAGAATTGCATTTCCAAGATTTGGTTCTCCATATCATTTGGAATTCTTGAATGATGAAGATGCAATGGCTCTTTTTCATCATTCAGCATTTTTGGAGGATAAGAGCTCTTATGCTCGGGAAGATCTTTCGAGAAAGATAATAAAGCTATGTAAGGGATTTCCACTTGCGATTACAGCGGTTGGAAGATCACTTCGCGGCCAACCTATAGAGATCTGGCGAAAAAGAGTAATGGAATGGTCTAAAGGTTCTTCTATACTTGCGTCAAACAATGATTTGCTTGCTTGCCTCAAAAGCAGCATAGATGCCTTGGATAAAGAAAAGCCTACCCTCAAGGAATGTTTCCTTGACCTTTGCTCATTTCCTAAAGATCAAAGGATCTCTGCTGCCACCCTCATAGATATGTGGGCAGAGTTATATGGCCTAGACGAACCTAGTCTGTCCATTGCAAACCTCTACGAACTAACCACCCAGAGTTTAGCTAATCTTATAGCCACAAGGAATGAGCGGGAGGCTGATGGCTATTACACTGAACGCTTTGTTACTCAGCCTGATATGCTTAGAGAGTTGGCTATCCATCAGGCGAGCCAGGACCCAATAGGACAGAGAAAAAGACTGATTATAGACATACGTGGAGATAATCTTCCTAACTGGCTGACAGAGGCAAAGCATCAGCCCATGCAGGCTCGACTATTATCTATCTCAACTGATGGGGCCTTCTCAAAAAAATGGCCAAACATGCAACTACCAAAAGCAGAGGTTCTAGTTCTAAATTTTGAAACAAACAGCTACGACTTACCTGAATTTGTGACGAAAATGGATAAATTAAAGGTTCTAATAGTCACAAATTTCAGTTTCTTACCTGCCGAATTAAATAATTTTCAACTACTTGGTTCATCATCAAATCTGAAGAGAATTAGATTGGAACGCATTTCAATTCCTTCAATAAGCAAGAACATCAAACAGTTGGAAAGTGTACAGAAGATATCTTTGTTCATGTGTAGCATCGGTCAAGCTTTTGGTAAAGGTTCCATCAACATTTTAGATGCATTGCCAAATCTAGGCGAAATGGACATAGATTGTTGCCATGAGCTGGTGGAGTTGCCTGTCGAGGTTTGTGATCTCATTCACCTTAAGAAGCTTAGCATCACCAACTGTCATAACCTATCCGCCTTGCCTGAAAAGATCGGAAAGTTACTCAGTTTGGAAGTGTTGAGGCTTAGGTCTTGTACAGACTTGTTAGAGTTGCCAAGCTCGATTAGGAACCTCAAAAAGTTAAACTTTCTTGACATATCCTTTTGCTTTAGCATTACGCAGTTGCCTGAACACATTGGTGAGATTTGCAGTTTAAAAAAGCTCAACATGAGACAATGCTCAAGATTGCAAGATCTCCCTGCATCAGTTTTGGACCTTGAGCAGTTGAAGGATGTGATATGTGATGAAGAGACAGAACTTTTATGGGAACCCTTCTTACCCTTTCTCAAAAACATACACATAAAGGTGGTCAAAGAAGATAACAACCTAAATTGGCTCCACAAGCTTCGATCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
NB-ARC RPW8

Protein Analysis

814

Amino Acids

92.7

Weight (kDa)

6.71

Isoelectric Point (pI)

37.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1762
AccB1I GGYRCC 1 cut(s) 721
AccB7I CCANNNNNTGG 2 cut(s) 914, 1984
AccBSI CCGCTC 1 cut(s) 1399
AccII CGCG 1 cut(s) 1089
AciI CCGC 4 cut(s) 1070, 1089, 1399, 2061
AclWI GGATC 2 cut(s) 835, 1277
AcoI YGGCCR 2 cut(s) 1090, 1622
AcsI RAATTY 7 cut(s) 190, 629, 857, 935, 1663, 1694, 1738
AcuI CTGAAG 3 cut(s) 444, 794, 1820
AfaI GTAC 5 cut(s) 28, 690, 798, 1869, 2122
AfiI CCNNNNNNNGG 3 cut(s) 914, 1952, 1984
AflII CTTAAG 2 cut(s) 530, 2024
AgeI ACCGGT 1 cut(s) 478
AhlI ACTAGT 1 cut(s) 319
AjnI CCWGG 3 cut(s) 717, 807, 1479
AjuI GAANNNNNNNTTGG 4 cut(s) 572, 604, 901, 933
AleI CACNNNNGTG 1 cut(s) 2223
Alw21I GWGCWC 1 cut(s) 1001
Alw26I GTCTC 5 cut(s) 77, 356, 383, 2251, 2330
AlwI GGATC 2 cut(s) 835, 1277
AlwNI CAGNNNCTG 1 cut(s) 467
Ama87I CYCGRG 1 cut(s) 1008
AoxI GGCC 4 cut(s) 1090, 1312, 1605, 1622
ApeKI GCWGC 5 cut(s) 237, 397, 563, 1188, 1277
ApoI RAATTY 7 cut(s) 190, 629, 857, 935, 1663, 1694, 1738
ArsI GACNNNNNNTTYG 2 cut(s) 870, 902
AsiGI ACCGGT 1 cut(s) 478
AspS9I GGNCC 4 cut(s) 679, 1483, 1605, 2299
AsuHPI GGTGA 4 cut(s) 433, 2012, 2032, 2237
AsuII TTCGAA 1 cut(s) 732
AvaI CYCGRG 1 cut(s) 1008
AvaII GGWCC 3 cut(s) 679, 1483, 2299
BalI TGGCCA 1 cut(s) 1624
BanI GGYRCC 1 cut(s) 721
BanII GRGCYC 1 cut(s) 1001
BbsI GAAGAC 2 cut(s) 302, 450
Bbv12I GWGCWC 1 cut(s) 1001
BbvI GCAGC 5 cut(s) 249, 384, 550, 1200, 1264
BccI CCATC 4 cut(s) 1403, 1476, 1595, 1931
BciT130I CCWGG 3 cut(s) 719, 809, 1481
BclI TGATCA 1 cut(s) 147
BcoDI GTCTC 5 cut(s) 77, 356, 383, 2251, 2330
BcuI ACTAGT 1 cut(s) 319
BfaI CTAG 6 cut(s) 185, 320, 1316, 1326, 1655, 1952
BfmI CTRYAG 1 cut(s) 1098
BfrI CTTAAG 2 cut(s) 530, 2024
BfuAI ACCTGC 1 cut(s) 1762
BglII AGATCT 3 cut(s) 1015, 1104, 2278
BisI GCNGC 6 cut(s) 238, 398, 564, 1090, 1189, 1278
BlpI GCTNAGC 1 cut(s) 2033
BlsI GCNGC 6 cut(s) 239, 399, 565, 1091, 1190, 1279
Bme1390I CCNGG 3 cut(s) 719, 809, 1481
Bme18I GGWCC 3 cut(s) 679, 1483, 2299
BmeT110I CYCGRG 1 cut(s) 1008
BmgT120I GGNCC 4 cut(s) 679, 1483, 1605, 2299
BmiI GGNNCC 8 cut(s) 715, 723, 1485, 1606, 1921, 2156, 2355, 2423
BmrFI CCNGG 3 cut(s) 719, 809, 1481
BpiI GAAGAC 2 cut(s) 302, 450
Bpu10I CCTNAGC 1 cut(s) 2111
Bpu1102I GCTNAGC 1 cut(s) 2033
Bpu14I TTCGAA 1 cut(s) 732
BpuEI CTTGAG 4 cut(s) 863, 1208, 2251, 2324
BsaAI YACGTR 1 cut(s) 1523
BsaI GGTCTC 1 cut(s) 356
BsaJI CCNNGG 3 cut(s) 366, 717, 1200
BsaWI WCCGGW 1 cut(s) 478
Bsc4I CCNNNNNNNGG 3 cut(s) 914, 1952, 1984
Bse118I RCCGGY 1 cut(s) 478
Bse1I ACTGG 4 cut(s) 132, 143, 761, 1547
Bse3DI GCAATG 4 cut(s) 204, 963, 1335, 1940
BseBI CCWGG 3 cut(s) 719, 809, 1481
BseDI CCNNGG 3 cut(s) 366, 717, 1200
BseGI GGATG 6 cut(s) 358, 502, 541, 578, 817, 2323
BseLI CCNNNNNNNGG 3 cut(s) 914, 1952, 1984
BseMI GCAATG 4 cut(s) 204, 963, 1335, 1940
BseMII CTCAG 2 cut(s) 1451, 2104
BseNI ACTGG 4 cut(s) 132, 143, 761, 1547
BseRI GAGGAG 1 cut(s) 224
BseXI GCAGC 5 cut(s) 249, 384, 550, 1200, 1264
BsgI GTGCAG 2 cut(s) 283, 359
Bsh1236I CGCG 1 cut(s) 1089
BshFI GGCC 4 cut(s) 1092, 1314, 1607, 1624
BshNI GGYRCC 1 cut(s) 721
BshTI ACCGGT 1 cut(s) 478
BsiHKAI GWGCWC 1 cut(s) 1001
BsiHKCI CYCGRG 1 cut(s) 1008
BsiSI CCGG 1 cut(s) 479
BslFI GGGAC 1 cut(s) 820
BslI CCNNNNNNNGG 3 cut(s) 914, 1952, 1984
BsmAI GTCTC 5 cut(s) 77, 356, 383, 2251, 2330
BsmBI CGTCTC 1 cut(s) 383
BsmFI GGGAC 1 cut(s) 820
BsnI GGCC 4 cut(s) 1092, 1314, 1607, 1624
Bso31I GGTCTC 1 cut(s) 356
BsoBI CYCGRG 1 cut(s) 1008
Bsp119I TTCGAA 1 cut(s) 732
Bsp1286I GDGCHC 1 cut(s) 1001
Bsp1407I TGTACA 3 cut(s) 688, 1867, 2120
Bsp1720I GCTNAGC 1 cut(s) 2033
BspACI CCGC 4 cut(s) 1070, 1089, 1399, 2061
BspANI GGCC 4 cut(s) 1092, 1314, 1607, 1624
BspCNI CTCAG 2 cut(s) 1450, 2103
BspFNI CGCG 1 cut(s) 1089
BspLI GGNNCC 8 cut(s) 715, 723, 1485, 1606, 1921, 2156, 2355, 2423
BspMI ACCTGC 1 cut(s) 1762
BspPI GGATC 2 cut(s) 835, 1277
BspT104I TTCGAA 1 cut(s) 732
BspT107I GGYRCC 1 cut(s) 721
BspTI CTTAAG 2 cut(s) 530, 2024
BspTNI GGTCTC 1 cut(s) 356
BsrBI CCGCTC 1 cut(s) 1399
BsrDI GCAATG 4 cut(s) 204, 963, 1335, 1940
BsrFI RCCGGY 1 cut(s) 478
BsrGI TGTACA 3 cut(s) 688, 1867, 2120
BsrI ACTGG 4 cut(s) 132, 143, 761, 1547
BssAI RCCGGY 1 cut(s) 478
BssECI CCNNGG 3 cut(s) 366, 717, 1200
BssT1I CCWWGG 2 cut(s) 366, 1200
Bst2UI CCWGG 3 cut(s) 719, 809, 1481
Bst4CI ACNGT 5 cut(s) 394, 487, 801, 1857, 2048
Bst6I CTCTTC 2 cut(s) 1796, 2328
BstAFI CTTAAG 2 cut(s) 530, 2024
BstAUI TGTACA 3 cut(s) 688, 1867, 2120
BstBAI YACGTR 1 cut(s) 1523
BstBI TTCGAA 1 cut(s) 732
BstC8I GCNNGC 5 cut(s) 726, 1173, 1177, 1477, 1575
BstDEI CTNAG 5 cut(s) 1437, 1451, 2033, 2090, 2111
BstF5I GGATG 6 cut(s) 358, 502, 541, 578, 817, 2323
BstFNI CGCG 1 cut(s) 1089
BstMAI GTCTC 5 cut(s) 77, 356, 383, 2251, 2330
BstMWI GCNNNNNNNGC 6 cut(s) 68, 1067, 1185, 1447, 1630, 2428
BstNI CCWGG 3 cut(s) 719, 809, 1481
BstNSI RCATGY 1 cut(s) 1633
BstSCI CCNGG 3 cut(s) 717, 807, 1479
BstSFI CTRYAG 1 cut(s) 1098
BstUI CGCG 1 cut(s) 1089
BstV1I GCAGC 5 cut(s) 249, 384, 550, 1200, 1264
BstV2I GAAGAC 2 cut(s) 302, 450
BstX2I RGATCY 4 cut(s) 1015, 1104, 1269, 2278
BstYI RGATCY 4 cut(s) 1015, 1104, 1269, 2278
BsuRI GGCC 4 cut(s) 1092, 1314, 1607, 1624
BtsCI GGATG 6 cut(s) 358, 502, 541, 578, 817, 2323
BtsI GCAGTG 2 cut(s) 12, 78
BtsIMutI CAGTG 6 cut(s) 12, 78, 125, 150, 468, 1419
BveI ACCTGC 1 cut(s) 1762
Cac8I GCNNGC 5 cut(s) 726, 1173, 1177, 1477, 1575
CaiI CAGNNNCTG 1 cut(s) 467
Cfr10I RCCGGY 1 cut(s) 478
Cfr13I GGNCC 4 cut(s) 679, 1483, 1605, 2299
CseI GACGC 1 cut(s) 1143
Csp6I GTAC 5 cut(s) 27, 689, 797, 1868, 2121
CspAI ACCGGT 1 cut(s) 478
CviAII CATG 8 cut(s) 91, 103, 692, 1570, 1630, 1888, 1979, 2254
CviQI GTAC 5 cut(s) 27, 689, 797, 1868, 2121
DdeI CTNAG 5 cut(s) 1437, 1451, 2033, 2090, 2111
DraI TTTAAA 2 cut(s) 97, 2241
EaeI YGGCCR 2 cut(s) 1090, 1622
Eam1104I CTCTTC 2 cut(s) 1796, 2328
EarI CTCTTC 2 cut(s) 1796, 2328
EciI GGCGGA 1 cut(s) 2050
Ecl136II GAGCTC 1 cut(s) 999
Eco130I CCWWGG 2 cut(s) 366, 1200
Eco24I GRGCYC 1 cut(s) 1001
Eco31I GGTCTC 1 cut(s) 356
Eco32I GATATC 2 cut(s) 115, 1878
Eco47I GGWCC 3 cut(s) 679, 1483, 2299
Eco53kI GAGCTC 1 cut(s) 999
Eco57I CTGAAG 3 cut(s) 444, 794, 1820
Eco88I CYCGRG 1 cut(s) 1008
EcoICRI GAGCTC 1 cut(s) 999
EcoO109I RGGNCCY 2 cut(s) 1483, 1605
EcoRI GAATTC 2 cut(s) 857, 935
EcoRII CCWGG 3 cut(s) 717, 807, 1479
EcoRV GATATC 2 cut(s) 115, 1878
EcoT14I CCWWGG 2 cut(s) 366, 1200
EcoT22I ATGCAT 1 cut(s) 1942
EcoT38I GRGCYC 1 cut(s) 1001
ErhI CCWWGG 2 cut(s) 366, 1200
Esp3I CGTCTC 1 cut(s) 383
FaeI CATG 8 cut(s) 94, 106, 695, 1573, 1633, 1891, 1982, 2257
FalI AAGNNNNNCTT 4 cut(s) 350, 382, 2156, 2188
FaqI GGGAC 1 cut(s) 820
FatI CATG 8 cut(s) 90, 102, 691, 1569, 1629, 1887, 1978, 2253
FauI CCCGC 1 cut(s) 1392
FbaI TGATCA 1 cut(s) 147
Fnu4HI GCNGC 6 cut(s) 238, 398, 564, 1090, 1189, 1278
FokI GGATG 6 cut(s) 365, 509, 548, 585, 824, 2330
FriOI GRGCYC 1 cut(s) 1001
Fsp4HI GCNGC 6 cut(s) 238, 398, 564, 1090, 1189, 1278
FspBI CTAG 6 cut(s) 185, 320, 1316, 1326, 1655, 1952
GluI GCNGC 6 cut(s) 238, 398, 564, 1090, 1189, 1278
HaeIII GGCC 4 cut(s) 1092, 1314, 1607, 1624
HapII CCGG 1 cut(s) 479
HgaI GACGC 1 cut(s) 1143
Hin1II CATG 8 cut(s) 94, 106, 695, 1573, 1633, 1891, 1982, 2257
HindIII AAGCTT 6 cut(s) 221, 287, 524, 1905, 2030, 2429
HinfI GANTC 3 cut(s) 131, 170, 833
HpaII CCGG 1 cut(s) 479
HphI GGTGA 4 cut(s) 433, 2012, 2032, 2237
Hpy166II GTNNAC 3 cut(s) 229, 754, 1868
Hpy188I TCNGA 5 cut(s) 20, 774, 832, 1800, 2081
Hpy8I GTNNAC 3 cut(s) 229, 754, 1868
HpyAV CCTTC 7 cut(s) 73, 404, 769, 1618, 1842, 2308, 2368
HpyCH4III ACNGT 5 cut(s) 394, 487, 801, 1857, 2048
HpyCH4IV ACGT 1 cut(s) 1522
HpyF10VI GCNNNNNNNGC 6 cut(s) 68, 1067, 1185, 1447, 1630, 2428
HpyF3I CTNAG 5 cut(s) 1437, 1451, 2033, 2090, 2111
HpySE526I ACGT 1 cut(s) 1522
Hsp92II CATG 8 cut(s) 94, 106, 695, 1573, 1633, 1891, 1982, 2257
Ksp22I TGATCA 1 cut(s) 147
LmnI GCTCC 2 cut(s) 255, 2427
Lsp1109I GCAGC 5 cut(s) 249, 384, 550, 1200, 1264
MaeI CTAG 6 cut(s) 185, 320, 1316, 1326, 1655, 1952
MaeII ACGT 1 cut(s) 1522
MaeIII GTNAC 7 cut(s) 481, 652, 886, 1432, 1699, 1732, 2085
MbiI CCGCTC 1 cut(s) 1399
MflI RGATCY 4 cut(s) 1015, 1104, 1269, 2278
MhlI GDGCHC 1 cut(s) 1001
MlsI TGGCCA 1 cut(s) 1624
MluNI TGGCCA 1 cut(s) 1624
MlyI GAGTC 3 cut(s) 125, 164, 842
MmeI TCCRAC 3 cut(s) 474, 1054, 1839
Mox20I TGGCCA 1 cut(s) 1624
Mph1103I ATGCAT 1 cut(s) 1942
MscI TGGCCA 1 cut(s) 1624
MseI TTAA 8 cut(s) 96, 531, 621, 1718, 1763, 2025, 2168, 2240
MslI CAYNNNNRTG 3 cut(s) 1292, 2223, 2390
Msp20I TGGCCA 1 cut(s) 1624
MspA1I CMGCKG 1 cut(s) 1070
MspCI CTTAAG 2 cut(s) 530, 2024
MspI CCGG 1 cut(s) 479
MspR9I CCNGG 3 cut(s) 719, 809, 1481
MvaI CCWGG 3 cut(s) 719, 809, 1481
MvnI CGCG 1 cut(s) 1089
MwoI GCNNNNNNNGC 6 cut(s) 68, 1067, 1185, 1447, 1630, 2428
NlaIII CATG 8 cut(s) 94, 106, 695, 1573, 1633, 1891, 1982, 2257
NlaIV GGNNCC 8 cut(s) 715, 723, 1485, 1606, 1921, 2156, 2355, 2423
NmuCI GTSAC 4 cut(s) 652, 886, 1699, 1732
NsiI ATGCAT 1 cut(s) 1942
NspI RCATGY 1 cut(s) 1633
NspV TTCGAA 1 cut(s) 732
OliI CACNNNNGTG 1 cut(s) 2223
PflMI CCANNNNNTGG 2 cut(s) 914, 1984
PfoI TCCNGGA 1 cut(s) 807
PinAI ACCGGT 1 cut(s) 478
PkrI GCNGC 6 cut(s) 239, 399, 565, 1091, 1190, 1279
PleI GAGTC 3 cut(s) 125, 164, 841
PpsI GAGTC 3 cut(s) 125, 164, 841
Ppu21I YACGTR 1 cut(s) 1523
PpuMI RGGWCCY 1 cut(s) 1483
Psp124BI GAGCTC 1 cut(s) 1001
Psp5II RGGWCCY 1 cut(s) 1483
Psp6I CCWGG 3 cut(s) 717, 807, 1479
PspGI CCWGG 3 cut(s) 717, 807, 1479
PspN4I GGNNCC 8 cut(s) 715, 723, 1485, 1606, 1921, 2156, 2355, 2423
PspPI GGNCC 4 cut(s) 679, 1483, 1605, 2299
PspPPI RGGWCCY 1 cut(s) 1483
PsrI GAACNNNNNNTAC 2 cut(s) 2346, 2378
PstNI CAGNNNCTG 1 cut(s) 467
PsuI RGATCY 4 cut(s) 1015, 1104, 1269, 2278
RsaI GTAC 5 cut(s) 28, 690, 798, 1869, 2122
RsaNI GTAC 5 cut(s) 27, 689, 797, 1868, 2121
RseI CAYNNNNRTG 3 cut(s) 1292, 2223, 2390
SacI GAGCTC 1 cut(s) 1001
SaqAI TTAA 8 cut(s) 96, 531, 621, 1718, 1763, 2025, 2168, 2240
SatI GCNGC 6 cut(s) 238, 398, 564, 1090, 1189, 1278
Sau96I GGNCC 4 cut(s) 679, 1483, 1605, 2299
SchI GAGTC 3 cut(s) 125, 164, 842
ScrFI CCNGG 3 cut(s) 719, 809, 1481
SduI GDGCHC 1 cut(s) 1001
SfcI CTRYAG 1 cut(s) 1098
SfuI TTCGAA 1 cut(s) 732
SinI GGWCC 3 cut(s) 679, 1483, 2299
SmiMI CAYNNNNRTG 3 cut(s) 1292, 2223, 2390
SmlI CTYRAG 6 cut(s) 530, 842, 1223, 2024, 2266, 2303
SmoI CTYRAG 6 cut(s) 530, 842, 1223, 2024, 2266, 2303
SpeI ACTAGT 1 cut(s) 319
SsiI CCGC 4 cut(s) 1070, 1089, 1399, 2061
SspMI CTAG 6 cut(s) 185, 320, 1316, 1326, 1655, 1952
SstI GAGCTC 1 cut(s) 1001
StyD4I CCNGG 3 cut(s) 717, 807, 1479
StyI CCWWGG 2 cut(s) 366, 1200
TaaI ACNGT 5 cut(s) 394, 487, 801, 1857, 2048
TaiI ACGT 1 cut(s) 1525
TaqI TCGA 7 cut(s) 403, 732, 1022, 1579, 2001, 2147, 2434
TaqII GACCGA 1 cut(s) 1889
TatI WGTACW 4 cut(s) 688, 796, 1867, 2120
TauI GCSGC 1 cut(s) 1092
Tru1I TTAA 8 cut(s) 96, 531, 621, 1718, 1763, 2025, 2168, 2240
Tru9I TTAA 8 cut(s) 96, 531, 621, 1718, 1763, 2025, 2168, 2240
TscAI CASTG 6 cut(s) 12, 78, 132, 150, 468, 1426
TseFI GTSAC 4 cut(s) 652, 886, 1699, 1732
TseI GCWGC 5 cut(s) 237, 397, 563, 1188, 1277
Tsp45I GTSAC 4 cut(s) 652, 886, 1699, 1732
TspDTI ATGAA 8 cut(s) 309, 753, 870, 959, 963, 1776, 1876, 2346
TspRI CASTG 6 cut(s) 12, 78, 132, 150, 468, 1426
Van91I CCANNNNNTGG 2 cut(s) 914, 1984
Vha464I CTTAAG 2 cut(s) 530, 2024
VpaK11BI GGWCC 3 cut(s) 679, 1483, 2299
XapI RAATTY 7 cut(s) 190, 629, 857, 935, 1663, 1694, 1738
XceI RCATGY 1 cut(s) 1633
XspI CTAG 6 cut(s) 185, 320, 1316, 1326, 1655, 1952
Zsp2I ATGCAT 1 cut(s) 1942
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.