Prupe.7G139500_v2.0.a1

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0000039
Physical Location & Seq
Reverse (-)
15544201 .. 15547481
3281 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G139500.1

Sequence Viewer

Length: 2442 bp
ATGGCATTGGCAGTAGGCGTGGGTGCTCTAAGAGCAGCATTTCAAATGCTGCTTGATGCGGTTATAGCAGTGAAGGCAGAGACTATCATGTTTAAGCCTCTCCTTGGAAATATCAAATCCACACTAGACGCTTTACAGCCAATGATAGAAGACATAGAAAAATATAACCCAAAGGAGGGGCTAGAAAATTATGCAATGCAAATGGAGGAGGGGGTAAATCTTGTTCGCAAGTGCAGCAAGGTTGGTGTGTGGAGCTGCTGCAGGAAATATAGATACACCAAAAAACTTGATGAATTGGATAGATGTCTTCAAAGACTAGTGGAAGTGTTGAAAGTGCAGGGCATAAGGGATGTCAGGGAGACCTTGGTTTCATTAAGGAACATAGAGACGGTGCTGCATCGTATTGAAGGGAACTTAGTGATGCAAAATCAGTCTGAAAAAATCAATGGTTGGTCTGCTGTGCCTGAACCTCCACCGGTTACAGTCGGGTTGGATGTGCCAGTGAAGGAGTTGAAGATAAAGCTTCTTAAGGATCATGTGTCCATGCTTGTGCTGACTGCTGCTGGTGGATGTGGGAAAACCACATTGGCAAAAAAGTTTTGTCAAGATCAGGAAGTAAAAGATAAATTCAAGGACAATATCTTCTTTGTCACTCTTTCCAAGAAGCCCAACTTGGACCTTATTGTACATGAACTATATCAACGGAAGGGTTCCCAGGTGCCTGCTTTCCAAAACGAAGTAATTGCGGTTAACTGGTTGCAACAATTTCTGAAGGAAACAGGACAAAGTCCTTTACTGTTTGTCCTGGATGATGTTTGGTCAGGATCAGAGTCCCTTCTTGAGAAGTTTGATCAATTCAAAATGTCAAATTACAAAGTTTTGGTCACGTCAAGATTTGCATTTCCAAGATTTGGTTCTCCATATCATTTGGAATCATTGAATGATGCAGATGCAATGGCTCTTTTTCGTCATTCAGCATCCTTGGATGATAAAACCTCTTATGCTCGGGAAGACCTTTCAAGAAAGATTATACTAGAGCTCTGTAAGGGATTTCCACTTGCCATTACAGAGGTTGGAAGATCACTTCGCGGCCAGCCTATAGAGATCTGGCGAAAAAAAGTAATGGAATGGTCTAAAGGTTCTTCTATACTTGCATCTAACAGTGATTTGCTTGCTTGCCTCCAAAGCAGCTTAGATGCCTTGGACAAAGAAAAACCTATCCTCAAGGAATGTTTCCTAGACTTTTGCTCATTTCCTAAAGATCAAAGGATCTCTGCTGCCACCCTCATAGATATGTGGGCTGAGTTATATGGGCTAGACGAACCTAGTCTGTCCATTGCAAACCTCTATGAACTAACCACCCAGAGTTTAGCTAATCTTGTAGACATAAGGAATGAGAGGGAGGCGGATGGCTATTACACTGAACACTTTGTTACTCAGCATGATATGCTTAGAGAGTTGGCTATCCATCAGGCGAGCCAGGAACCAATAGGACAGAGAAAAAGACTAACTACAGACATACGTGGAGACAATCTTCCTAACTGGCTGACAGAGGCAAAGCATCAGCTCATGCAGGCTCGACTATTATCTATCTCAACTGATGGAGCGTTCTCAAAAAAATGGCCAAACATGCAACTACCAAAATTAGAGGTTCTAGTTCTAAATTTTGAAACAAACAGCTACACCTTACCCGAATTTGTCAAGAAAATGGATAATTTAAAGGTTCTAATAGTCACAAATTACTGTTTCTTACCTTCGGAGTTAAATAATTTTCAACTACTTTGTTCGTCATCAAATCTGAAAAGAATTAGATTGGAACGCATTTCAATTCCTTCCATAAGCAAGAACCTCAAACAGTTGAAAAGTGTACAGAAGATATCCTTATTCATGTGTAGCATCGGTCAAGCTTTTGGTAAAGGTTCCATCCAAATTCTAGATGCATTGCCAAATCTAGCTGAAATGCACATAGATTATTGCCATGATCTGGTGGAATTGCCAGCCGAGCTTTGTGATCTTATTCGCCTTAAGAAGCTTAGCATCACTAACTGTCATAACTTATCCGCCTTGCCTGAAAAGATTGGAAAGCTAGTAAGTTTGGAAGTGTTGAGGCTTAGGTCATGTACAAACTTGTTAGAGTTGCCAAACTCGATTAGGAACCTTGAAAAGTTAAAGTTTCTCGACATATCCTATTGCTTGAGCATTAAGGAGTTGCCTGAACACATTGGTGAGATGTGCAGTTTAAAAAAGCTCAACATGAGACAATGCTCAAGATTGCAAGATCTGCCTGCATCAGTTTTGGACCTTGAACGGTTGAAGAATGTGATATGTGACGAAGAGACTGAAATTTTATGGGAACCCTTCTTACCCCTTCTCAAAAACGTACACATAAAGGTGGTCAAAGAAGATATCAACCTAAATTGGCTCCACAAGCATCCATCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
NB-ARC RPW8

Protein Analysis

814

Amino Acids

92.57

Weight (kDa)

7.72

Isoelectric Point (pI)

39.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 718
AccB7I CCANNNNNTGG 2 cut(s) 911, 1984
AccI GTMKAC 1 cut(s) 1383
AccII CGCG 1 cut(s) 1089
AciI CCGC 5 cut(s) 59, 746, 1089, 1406, 2061
AclWI GGATC 3 cut(s) 540, 832, 1277
AcoI YGGCCR 2 cut(s) 1090, 1622
AcsI RAATTY 5 cut(s) 626, 1663, 1694, 1929, 2343
AcuI CTGAAG 1 cut(s) 791
AfaI GTAC 4 cut(s) 687, 1869, 2122, 2382
AfiI CCNNNNNNNGG 5 cut(s) 104, 175, 176, 911, 1984
AflII CTTAAG 2 cut(s) 527, 2024
AgeI ACCGGT 1 cut(s) 475
AhlI ACTAGT 1 cut(s) 316
AjiI CACGTC 1 cut(s) 888
AjnI CCWGG 3 cut(s) 714, 804, 1479
AjuI GAANNNNNNNTTGG 6 cut(s) 569, 601, 656, 688, 898, 930
AleI CACNNNNGTG 1 cut(s) 2223
Alw21I GWGCWC 2 cut(s) 28, 1041
Alw26I GTCTC 6 cut(s) 74, 353, 380, 1521, 2251, 2330
AlwI GGATC 3 cut(s) 540, 832, 1277
Ama87I CYCGRG 1 cut(s) 1005
AoxI GGCC 2 cut(s) 1090, 1622
ApeKI GCWGC 9 cut(s) 35, 49, 234, 255, 258, 394, 560, 1188, 1277
ApoI RAATTY 5 cut(s) 626, 1663, 1694, 1929, 2343
ArsI GACNNNNNNTTYG 2 cut(s) 867, 899
AsiGI ACCGGT 1 cut(s) 475
AspS9I GGNCC 2 cut(s) 676, 2299
AsuHPI GGTGA 1 cut(s) 2237
AvaI CYCGRG 1 cut(s) 1005
AvaII GGWCC 2 cut(s) 676, 2299
BalI TGGCCA 1 cut(s) 1624
BanI GGYRCC 1 cut(s) 718
BanII GRGCYC 1 cut(s) 1041
BbsI GAAGAC 3 cut(s) 156, 299, 1017
Bbv12I GWGCWC 2 cut(s) 28, 1041
BbvI GCAGC 9 cut(s) 36, 47, 242, 245, 246, 381, 547, 1200, 1264
BccI CCATC 4 cut(s) 1403, 1476, 1595, 1931
BcgI CGANNNNNNTGC 2 cut(s) 725, 759
BciT130I CCWGG 3 cut(s) 716, 806, 1481
BclI TGATCA 1 cut(s) 850
BcoDI GTCTC 6 cut(s) 74, 353, 380, 1521, 2251, 2330
BcuI ACTAGT 1 cut(s) 316
BfmI CTRYAG 3 cut(s) 259, 1098, 1512
BfrI CTTAAG 2 cut(s) 527, 2024
BglII AGATCT 2 cut(s) 1104, 2278
BlpI GCTNAGC 1 cut(s) 2033
Bme1390I CCNGG 3 cut(s) 716, 806, 1481
Bme18I GGWCC 2 cut(s) 676, 2299
BmeT110I CYCGRG 1 cut(s) 1005
BmgBI CACGTC 1 cut(s) 888
BmgT120I GGNCC 2 cut(s) 676, 2299
BmiI GGNNCC 7 cut(s) 712, 720, 1485, 1921, 2156, 2355, 2423
BmrFI CCNGG 3 cut(s) 716, 806, 1481
BpiI GAAGAC 3 cut(s) 156, 299, 1017
Bpu10I CCTNAGC 1 cut(s) 2111
Bpu1102I GCTNAGC 1 cut(s) 2033
BpuEI CTTGAG 4 cut(s) 860, 1208, 2215, 2251
BsaAI YACGTR 1 cut(s) 1523
BsaI GGTCTC 1 cut(s) 353
BsaJI CCNNGG 5 cut(s) 103, 363, 714, 981, 1200
BsaWI WCCGGW 1 cut(s) 475
Bsc4I CCNNNNNNNGG 5 cut(s) 104, 175, 176, 911, 1984
Bse118I RCCGGY 1 cut(s) 475
Bse1I ACTGG 3 cut(s) 500, 758, 1547
Bse3DI GCAATG 4 cut(s) 201, 960, 1335, 1940
BseBI CCWGG 3 cut(s) 716, 806, 1481
BseDI CCNNGG 5 cut(s) 103, 363, 714, 981, 1200
BseGI GGATG 9 cut(s) 355, 499, 575, 814, 977, 991, 1414, 1923, 2431
BseLI CCNNNNNNNGG 5 cut(s) 104, 175, 176, 911, 1984
BseMI GCAATG 4 cut(s) 201, 960, 1335, 1940
BseMII CTCAG 2 cut(s) 1293, 1451
BseNI ACTGG 3 cut(s) 500, 758, 1547
BseRI GAGGAG 1 cut(s) 221
BseXI GCAGC 9 cut(s) 36, 47, 242, 245, 246, 381, 547, 1200, 1264
BsgI GTGCAG 3 cut(s) 253, 356, 2254
Bsh1236I CGCG 1 cut(s) 1089
BshFI GGCC 2 cut(s) 1092, 1624
BshNI GGYRCC 1 cut(s) 718
BshTI ACCGGT 1 cut(s) 475
BsiHKAI GWGCWC 2 cut(s) 28, 1041
BsiHKCI CYCGRG 1 cut(s) 1005
BsiSI CCGG 1 cut(s) 476
BslFI GGGAC 1 cut(s) 817
BslI CCNNNNNNNGG 5 cut(s) 104, 175, 176, 911, 1984
BsmAI GTCTC 6 cut(s) 74, 353, 380, 1521, 2251, 2330
BsmBI CGTCTC 1 cut(s) 380
BsmFI GGGAC 1 cut(s) 817
BsnI GGCC 2 cut(s) 1092, 1624
Bso31I GGTCTC 1 cut(s) 353
BsoBI CYCGRG 1 cut(s) 1005
Bsp1286I GDGCHC 2 cut(s) 28, 1041
Bsp1407I TGTACA 3 cut(s) 685, 1867, 2120
Bsp1720I GCTNAGC 1 cut(s) 2033
BspACI CCGC 5 cut(s) 59, 746, 1089, 1406, 2061
BspANI GGCC 2 cut(s) 1092, 1624
BspCNI CTCAG 2 cut(s) 1294, 1450
BspFNI CGCG 1 cut(s) 1089
BspLI GGNNCC 7 cut(s) 712, 720, 1485, 1921, 2156, 2355, 2423
BspMAI CTGCAG 1 cut(s) 263
BspPI GGATC 3 cut(s) 540, 832, 1277
BspT107I GGYRCC 1 cut(s) 718
BspTI CTTAAG 2 cut(s) 527, 2024
BspTNI GGTCTC 1 cut(s) 353
BsrDI GCAATG 4 cut(s) 201, 960, 1335, 1940
BsrFI RCCGGY 1 cut(s) 475
BsrGI TGTACA 3 cut(s) 685, 1867, 2120
BsrI ACTGG 3 cut(s) 500, 758, 1547
BssAI RCCGGY 1 cut(s) 475
BssECI CCNNGG 5 cut(s) 103, 363, 714, 981, 1200
BssT1I CCWWGG 4 cut(s) 103, 363, 981, 1200
Bst2UI CCWGG 3 cut(s) 716, 806, 1481
Bst4CI ACNGT 8 cut(s) 391, 484, 798, 1163, 1745, 1857, 2048, 2310
Bst6I CTCTTC 1 cut(s) 2328
BstAFI CTTAAG 2 cut(s) 527, 2024
BstAPI GCANNNNNTGC 2 cut(s) 1447, 2281
BstAUI TGTACA 3 cut(s) 685, 1867, 2120
BstBAI YACGTR 1 cut(s) 1523
BstC8I GCNNGC 8 cut(s) 723, 1094, 1173, 1177, 1477, 1575, 1998, 2286
BstDEI CTNAG 8 cut(s) 29, 415, 1192, 1302, 1437, 1451, 2033, 2111
BstF5I GGATG 9 cut(s) 355, 499, 575, 814, 977, 991, 1414, 1923, 2431
BstFNI CGCG 1 cut(s) 1089
BstMAI GTCTC 6 cut(s) 74, 353, 380, 1521, 2251, 2330
BstNI CCWGG 3 cut(s) 716, 806, 1481
BstNSI RCATGY 1 cut(s) 1633
BstSCI CCNGG 3 cut(s) 714, 804, 1479
BstSFI CTRYAG 3 cut(s) 259, 1098, 1512
BstUI CGCG 1 cut(s) 1089
BstV1I GCAGC 9 cut(s) 36, 47, 242, 245, 246, 381, 547, 1200, 1264
BstV2I GAAGAC 3 cut(s) 156, 299, 1017
BstX2I RGATCY 3 cut(s) 1104, 1269, 2278
BstYI RGATCY 3 cut(s) 1104, 1269, 2278
BsuRI GGCC 2 cut(s) 1092, 1624
BtrI CACGTC 1 cut(s) 888
BtsCI GGATG 9 cut(s) 355, 499, 575, 814, 977, 991, 1414, 1923, 2431
BtsI GCAGTG 1 cut(s) 75
BtsIMutI CAGTG 4 cut(s) 75, 507, 1168, 1419
Cac8I GCNNGC 8 cut(s) 723, 1094, 1173, 1177, 1477, 1575, 1998, 2286
Cfr10I RCCGGY 1 cut(s) 475
Cfr13I GGNCC 2 cut(s) 676, 2299
CseI GACGC 1 cut(s) 137
Csp6I GTAC 4 cut(s) 686, 1868, 2121, 2381
CspAI ACCGGT 1 cut(s) 475
CviQI GTAC 4 cut(s) 686, 1868, 2121, 2381
DdeI CTNAG 8 cut(s) 29, 415, 1192, 1302, 1437, 1451, 2033, 2111
DraI TTTAAA 2 cut(s) 1719, 2241
EaeI YGGCCR 2 cut(s) 1090, 1622
Eam1104I CTCTTC 1 cut(s) 2328
EarI CTCTTC 1 cut(s) 2328
EciI GGCGGA 2 cut(s) 1421, 2050
Ecl136II GAGCTC 1 cut(s) 1039
Eco130I CCWWGG 4 cut(s) 103, 363, 981, 1200
Eco24I GRGCYC 1 cut(s) 1041
Eco31I GGTCTC 1 cut(s) 353
Eco32I GATATC 2 cut(s) 1878, 2407
Eco47I GGWCC 2 cut(s) 676, 2299
Eco53kI GAGCTC 1 cut(s) 1039
Eco57I CTGAAG 1 cut(s) 791
Eco88I CYCGRG 1 cut(s) 1005
EcoICRI GAGCTC 1 cut(s) 1039
EcoRII CCWGG 3 cut(s) 714, 804, 1479
EcoRV GATATC 2 cut(s) 1878, 2407
EcoT14I CCWWGG 4 cut(s) 103, 363, 981, 1200
EcoT22I ATGCAT 1 cut(s) 1942
EcoT38I GRGCYC 1 cut(s) 1041
ErhI CCWWGG 4 cut(s) 103, 363, 981, 1200
Esp3I CGTCTC 1 cut(s) 380
FalI AAGNNNNNCTT 4 cut(s) 656, 688, 1865, 1897
FaqI GGGAC 1 cut(s) 817
FbaI TGATCA 1 cut(s) 850
FblI GTMKAC 1 cut(s) 1383
FokI GGATG 9 cut(s) 362, 506, 582, 821, 964, 998, 1421, 1910, 2418
FriOI GRGCYC 1 cut(s) 1041
HaeIII GGCC 2 cut(s) 1092, 1624
HapII CCGG 1 cut(s) 476
HgaI GACGC 1 cut(s) 137
HincII GTYRAC 1 cut(s) 751
HindII GTYRAC 1 cut(s) 751
HindIII AAGCTT 3 cut(s) 521, 1905, 2030
HinfI GANTC 2 cut(s) 830, 932
HpaI GTTAAC 1 cut(s) 751
HpaII CCGG 1 cut(s) 476
HphI GGTGA 1 cut(s) 2237
Hpy166II GTNNAC 4 cut(s) 751, 1384, 1868, 2383
Hpy188I TCNGA 5 cut(s) 436, 771, 829, 1759, 1800
Hpy8I GTNNAC 4 cut(s) 751, 1384, 1868, 2383
HpyCH4III ACNGT 8 cut(s) 391, 484, 798, 1163, 1745, 1857, 2048, 2310
HpyCH4IV ACGT 3 cut(s) 887, 1522, 2379
HpyF3I CTNAG 8 cut(s) 29, 415, 1192, 1302, 1437, 1451, 2033, 2111
HpySE526I ACGT 3 cut(s) 887, 1522, 2379
Ksp22I TGATCA 1 cut(s) 850
KspAI GTTAAC 1 cut(s) 751
LmnI GCTCC 3 cut(s) 252, 1604, 2427
Lsp1109I GCAGC 9 cut(s) 36, 47, 242, 245, 246, 381, 547, 1200, 1264
MaeII ACGT 3 cut(s) 887, 1522, 2379
MaeIII GTNAC 6 cut(s) 478, 649, 883, 1432, 1732, 2327
MflI RGATCY 3 cut(s) 1104, 1269, 2278
MhlI GDGCHC 2 cut(s) 28, 1041
MlsI TGGCCA 1 cut(s) 1624
MluNI TGGCCA 1 cut(s) 1624
MlyI GAGTC 1 cut(s) 839
MmeI TCCRAC 2 cut(s) 471, 1054
Mox20I TGGCCA 1 cut(s) 1624
Mph1103I ATGCAT 1 cut(s) 1942
MscI TGGCCA 1 cut(s) 1624
MslI CAYNNNNRTG 4 cut(s) 548, 1292, 2223, 2390
Msp20I TGGCCA 1 cut(s) 1624
MspCI CTTAAG 2 cut(s) 527, 2024
MspI CCGG 1 cut(s) 476
MspR9I CCNGG 3 cut(s) 716, 806, 1481
MvaI CCWGG 3 cut(s) 716, 806, 1481
MvnI CGCG 1 cut(s) 1089
NlaIV GGNNCC 7 cut(s) 712, 720, 1485, 1921, 2156, 2355, 2423
NmeAIII GCCGAG 1 cut(s) 2026
NmuCI GTSAC 4 cut(s) 649, 883, 1732, 2327
NsiI ATGCAT 1 cut(s) 1942
NspI RCATGY 1 cut(s) 1633
OliI CACNNNNGTG 1 cut(s) 2223
PfeI GAWTC 1 cut(s) 932
PflFI GACNNNGTC 1 cut(s) 786
PflMI CCANNNNNTGG 2 cut(s) 911, 1984
PfoI TCCNGGA 1 cut(s) 804
PinAI ACCGGT 1 cut(s) 475
PleI GAGTC 1 cut(s) 838
PpsI GAGTC 1 cut(s) 838
Ppu21I YACGTR 1 cut(s) 1523
Psp124BI GAGCTC 1 cut(s) 1041
Psp6I CCWGG 3 cut(s) 714, 804, 1479
PspGI CCWGG 3 cut(s) 714, 804, 1479
PspN4I GGNNCC 7 cut(s) 712, 720, 1485, 1921, 2156, 2355, 2423
PspPI GGNCC 2 cut(s) 676, 2299
PsrI GAACNNNNNNTAC 4 cut(s) 207, 239, 2346, 2378
PstI CTGCAG 1 cut(s) 263
PsuI RGATCY 3 cut(s) 1104, 1269, 2278
PsyI GACNNNGTC 1 cut(s) 786
RsaI GTAC 4 cut(s) 687, 1869, 2122, 2382
RsaNI GTAC 4 cut(s) 686, 1868, 2121, 2381
RseI CAYNNNNRTG 4 cut(s) 548, 1292, 2223, 2390
SacI GAGCTC 1 cut(s) 1041
Sau96I GGNCC 2 cut(s) 676, 2299
SchI GAGTC 1 cut(s) 839
ScrFI CCNGG 3 cut(s) 716, 806, 1481
SduI GDGCHC 2 cut(s) 28, 1041
SfcI CTRYAG 3 cut(s) 259, 1098, 1512
SinI GGWCC 2 cut(s) 676, 2299
SmiMI CAYNNNNRTG 4 cut(s) 548, 1292, 2223, 2390
SmlI CTYRAG 6 cut(s) 527, 839, 1223, 2024, 2194, 2266
SmoI CTYRAG 6 cut(s) 527, 839, 1223, 2024, 2194, 2266
SpeI ACTAGT 1 cut(s) 316
SsiI CCGC 5 cut(s) 59, 746, 1089, 1406, 2061
SstI GAGCTC 1 cut(s) 1041
StyD4I CCNGG 3 cut(s) 714, 804, 1479
StyI CCWWGG 4 cut(s) 103, 363, 981, 1200
TaaI ACNGT 8 cut(s) 391, 484, 798, 1163, 1745, 1857, 2048, 2310
TaiI ACGT 3 cut(s) 890, 1525, 2382
TaqI TCGA 3 cut(s) 1579, 2147, 2178
TaqII GACCGA 1 cut(s) 1889
TatI WGTACW 3 cut(s) 685, 1867, 2120
TauI GCSGC 1 cut(s) 1092
TfiI GAWTC 1 cut(s) 932
TscAI CASTG 4 cut(s) 75, 507, 1168, 1426
TseFI GTSAC 4 cut(s) 649, 883, 1732, 2327
TseI GCWGC 9 cut(s) 35, 49, 234, 255, 258, 394, 560, 1188, 1277
Tsp45I GTSAC 4 cut(s) 649, 883, 1732, 2327
TspDTI ATGAA 5 cut(s) 306, 360, 705, 1365, 1876
TspGWI ACGGA 1 cut(s) 718
TspRI CASTG 4 cut(s) 75, 507, 1168, 1426
Tth111I GACNNNGTC 1 cut(s) 786
Van91I CCANNNNNTGG 2 cut(s) 911, 1984
Vha464I CTTAAG 2 cut(s) 527, 2024
VpaK11BI GGWCC 2 cut(s) 676, 2299
XapI RAATTY 5 cut(s) 626, 1663, 1694, 1929, 2343
XbaI TCTAGA 1 cut(s) 1933
XceI RCATGY 1 cut(s) 1633
XmiI GTMKAC 1 cut(s) 1383
Zsp2I ATGCAT 1 cut(s) 1942
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.