RLG00000021950

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000039
Physical Location & Seq
Reverse (-)
79479584 .. 79485661
6078 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000021950

Sequence Viewer

Length: 2619 bp
ATGGCGATTGTGGGGGATTTTCTTGTAGGGAAAGCACTCGAAGCACTGTATGCTGGTGTTGAAAAGCTGATTGCCAATAATCTACTCTTTAAATCCCTCTCCACCGACATCAAGTCTAAGCTAGACTCTTTGAGACCGATGATCCAACAGATGGTACAATGTAACCAGCAACCCGATTGTCCAGAGGATCCAGTTTTAAGAGATTTACGAGTACTAATGGAGGAAGGCACAGTGCTGATCGGTAATTGCTTCTCTGATATTCGTATTTGGCACACCTACAAAAAGTACAAATACACCAACAAACTTCTCGAGTTGAATGAATCTCTTGAGAAGCAGTTAACTTTACTGAATGTGCGTGTAGCGGTTGTTGTAGACGAGAACAATCGTATGCTCCATGAAGTCTTAGATATTGTGAATCCAAATAAACCTGCAGAAATTGAAGCTCGTTGTGCACTACCTGAACTACCGCCATATACAGTTGGATTGGATATTCCACTGGAGAAATTGAAGATGGAAATTTTTAAGGATGAGGTATCGAGGCTTGTACTGACTGCTCCCGGAGGATGTGGGAAAACTACTCTGGCATCAACGTTTTGTCAAGAACAAGACGTCAAAGATAAATTCAAGAACAACATCTTCTTCGTCACTGTTTCTAAAAAGCCCAATTTGGAACTTATTATGAAAGAGCTATACAAACAAAAGGGTTATAAGGTACCTACTTTCCAGAATGGAGTCTTTCCAGTGAAATGGCTACAACAAATTGTGAAGGAAAAAGGTGATGATCCTTTATTGTTGGTCTTGGATGATGTTTGGTCTGGATCAGAATCTCTTCTGCAGAAGTTTGAATTCAAAATGTCAAATTACAAGATTTTAGTGACATCGAGGTCTGAATTTCCGGGATTCGGTTCTTCATATCATCTACAACTATTAGATAATGACAATGCAATGGAACTATTTCATCATACAGCATCCTTGGGAAACAAGAGCTCTCATATTCCAAAAGATCTTTCAAAAGAGATAGTAAAGCACTGTAATGGATTTCCACTGGCCATTACAGTGGCGGGAAGATCACTTTGCGGTAAACCAATAGAAATGTGGCGAAGCAGAGTTATTGAATGGTCGAAAGGTTATTCTATTCTGGATTTTGAGACCGAATTGCTTCTTTGCCTCAAAACTAGCTTAGATGCCTTGGATAATGATATGCCTATGGTTAAGGAATGTTTCTTGGACCTAGGTGTGTTTCCAGAAGATGCTAGAATCGAAGTTACAACTCTCATTGACATGTGGGCAGAGTTGTATGGTCTGGACTCAGGAAGTTTATGCATTGCCAAACTATATGAACTCAACAATCGCAGTCTAGCTAATTTGTCACATTTTAGGGGTAGGGCGTTGGTAGTTCATGAGGAGGATGGAGACTATAGTGACTACATTGTTAAGCAGCATGATTTGCTAAGAGAATTGGCCGTCTACCATTCGAAACGAGATCCGATAGAGCGTAGAGAAAGAGTGATTATAGAAATATCTGGAAACAATCTTCCCAAGTGGTGGAGTGAACAGAAGTACCAACCCATCAAGGCTCGTCTAGTATCAATCTCAACTGATGGAGACTTCTGTGTGAAATGGCCCCACATGCAACTACCTGAAGTCCAGGTTCTAGTGTTGAATTTTCAGACTAAATATAAATTTGCCTTGCCCGAATTTGTGGAGAAAATGGAAAAGCTCAAGATGCTCATTCTGAAAAATTCTAGCTTTTATAGTGAAATAGATAATTTTCAACTTCTGGATGCCTTATCAAATCTAAGGAGTATCATATTAGACGGCATCGATGTTTCTTTCATAACCAAGAGCCCAGTGCAGTTGAAGACTCTGCACAAGTTATATTTGAGAAATGTTGAATCTCTCGGCAACGGTCCTGTCAAATTGTCACATGTATTTCCAAATCTCAAGGAAATGGTCATTCATTGTTGCCGCCAATTCAAGGAATTGCCTGCAGAGCTCTGCGAGCTGATTCATCTTACAAAGCTCGCAATCATCGCTTCTATTCGTTCTGGCTTGCCCAAATGGATTGGAAATCTGGTCAATTTAGAAGTGTTGAGGCTTCGGTTCAATATAGAGCTTTTAGAGATTCCAGACTCGATTGGAAATCTCAACAAATTAAAATTTCTTGAGATTACTGCTTCCAATAAACTTGAGAAATTGCCTGAAAACATTAGTGAGCTCAAGTGTTTGACAAATCTCAGCATCACGTACGGCTATTGGCTATCTGCCTTGCCGGAAGCGATTGGAAATTTGGTCAATTTAGAAGTATTGAGTCTAAGGCTCTGTGACAGTTTGACAGAGTTGCCGGAGTCGATTAGAAACCTCAAAAAGTTGACCTTTCTTGACATCCATCGGTGCGACAAAATCAAGGAGTTGCCTGAACAGATTGGTGAATTGAAGAGTTTAAGAAAGCTGCAAATGAGTCGTTGCCCCGAATTGACAAAACTGCCTCAATCAGTTTCGGATCTTCAGCAGTTAGAGGAAGTCATATGCGATGAGTGGGCCGCAACACATCTATGGACACCCTTGTTACCCACTCTCAAACACCTTCGCATCGTGGTGTATAAGGGGGAACACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
NB-ARC RPW8

Protein Analysis

873

Amino Acids

99.79

Weight (kDa)

6.26

Isoelectric Point (pI)

42.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RPW8 PF05659 4 - 122 5.4e-15 Arabidopsis broad-spectrum mildew resistance protein RPW8
NB-ARC PF00931 166 - 323 6.3e-14 NB-ARC domain
LRR_14 PF23598 664 - 748 2.2e-10 Leucine-rich repeat region
LRR_14 PF23598 754 - 799 2.9e-06 Leucine-rich repeat region
LRR_14 PF23598 801 - 867 1.4e-06 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 708
AasI GACNNNNNNGTC 1 cut(s) 883
AatII GACGTC 1 cut(s) 612
Acc36I ACCTGC 1 cut(s) 436
Acc65I GGTACC 1 cut(s) 712
AccB1I GGYRCC 1 cut(s) 712
AccB7I CCANNNNNTGG 2 cut(s) 151, 1545
AccI GTMKAC 2 cut(s) 372, 1467
AciI CCGC 6 cut(s) 362, 467, 1061, 1077, 1969, 2544
AclI AACGTT 1 cut(s) 590
AclWI GGATC 7 cut(s) 136, 182, 195, 776, 826, 1478, 2511
AcoI YGGCCR 2 cut(s) 1047, 1461
AcuI CTGAAG 2 cut(s) 1662, 2492
AcyI GRCGYC 1 cut(s) 609
AfaI GTAC 7 cut(s) 156, 213, 287, 546, 714, 1562, 2249
AfiI CCNNNNNNNGG 4 cut(s) 151, 902, 1545, 1978
AflIII ACRYGT 2 cut(s) 1281, 1927
AhdI GACNNNNNGTC 1 cut(s) 112
AjnI CCWGG 1 cut(s) 1647
AjuI GAANNNNNNNTTGG 2 cut(s) 991, 1023
Alw21I GWGCWC 4 cut(s) 454, 989, 1998, 2220
Alw26I GTCTC 4 cut(s) 127, 1142, 1407, 1599
Alw44I GTGCAC 1 cut(s) 450
AlwI GGATC 7 cut(s) 136, 182, 195, 776, 826, 1478, 2511
Ama87I CYCGRG 1 cut(s) 308
AoxI GGCC 4 cut(s) 1047, 1461, 1622, 2541
ApaLI GTGCAC 1 cut(s) 450
ApeKI GCWGC 2 cut(s) 1438, 2452
Asp700I GAANNNNTTC 3 cut(s) 828, 954, 1158
Asp718I GGTACC 1 cut(s) 712
AspA2I CCTAGG 1 cut(s) 1231
AspS9I GGNCC 4 cut(s) 1228, 1623, 1910, 2541
AsuC2I CCSGG 2 cut(s) 558, 897
AsuHPI GGTGA 2 cut(s) 788, 2441
AsuII TTCGAA 1 cut(s) 1475
AvaI CYCGRG 1 cut(s) 308
AvaII GGWCC 2 cut(s) 1228, 1910
AvrII CCTAGG 1 cut(s) 1231
BaeGI GKGCMC 1 cut(s) 454
BaeI ACNNNNGTAYC 2 cut(s) 1544, 1577
BalI TGGCCA 1 cut(s) 1049
BamHI GGATCC 1 cut(s) 187
BanI GGYRCC 1 cut(s) 712
BanII GRGCYC 4 cut(s) 989, 1850, 1998, 2220
BbsI GAAGAC 1 cut(s) 1868
Bbv12I GWGCWC 4 cut(s) 454, 989, 1998, 2220
BbvI GCAGC 2 cut(s) 1450, 2439
BccI CCATC 6 cut(s) 145, 505, 1403, 1577, 1595, 2397
BceAI ACGGC 3 cut(s) 1448, 1834, 2266
BcgI CGANNNNNNTGC 2 cut(s) 2444, 2478
BciT130I CCWGG 1 cut(s) 1649
BcnI CCSGG 2 cut(s) 558, 897
BcoDI GTCTC 4 cut(s) 127, 1142, 1407, 1599
BfaI CTAG 8 cut(s) 122, 1176, 1232, 1254, 1358, 1583, 1655, 1746
BfmI CTRYAG 4 cut(s) 429, 833, 1417, 1989
BfuAI ACCTGC 1 cut(s) 436
BglII AGATCT 1 cut(s) 1003
BisI GCNGC 4 cut(s) 1439, 1969, 2453, 2544
BlnI CCTAGG 1 cut(s) 1231
BlsI GCNGC 4 cut(s) 1440, 1970, 2454, 2545
BmcAI AGTACT 1 cut(s) 213
Bme1390I CCNGG 3 cut(s) 558, 897, 1649
Bme18I GGWCC 2 cut(s) 1228, 1910
BmeRI GACNNNNNGTC 1 cut(s) 112
BmeT110I CYCGRG 1 cut(s) 308
BmgT120I GGNCC 4 cut(s) 1228, 1623, 1910, 2541
BmiI GGNNCC 3 cut(s) 189, 714, 1625
BmrFI CCNGG 3 cut(s) 558, 897, 1649
BmrI ACTGGG 1 cut(s) 1844
BmsI GCATC 9 cut(s) 593, 977, 1174, 1240, 1716, 1774, 1830, 2250, 2601
BmuI ACTGGG 1 cut(s) 1844
BpiI GAAGAC 1 cut(s) 1868
BpmI CTGGAG 1 cut(s) 518
Bpu14I TTCGAA 1 cut(s) 1475
BpuEI CTTGAG 6 cut(s) 347, 1706, 1928, 2186, 2204, 2210
BpuMI CCSGG 2 cut(s) 558, 897
Bsa29I ATCGAT 1 cut(s) 1824
BsaAI YACGTR 1 cut(s) 2247
BsaBI GATNNNNATC 1 cut(s) 823
BsaHI GRCGYC 1 cut(s) 609
BsaI GGTCTC 2 cut(s) 127, 1142
BsaJI CCNNGG 3 cut(s) 972, 1188, 1231
Bsc4I CCNNNNNNNGG 4 cut(s) 151, 902, 1545, 1978
Bse1I ACTGG 5 cut(s) 191, 501, 740, 1050, 1850
Bse3DI GCAATG 2 cut(s) 951, 1323
Bse8I GATNNNNATC 1 cut(s) 823
BseBI CCWGG 1 cut(s) 1649
BseCI ATCGAT 1 cut(s) 1824
BseDI CCNNGG 3 cut(s) 972, 1188, 1231
BseGI GGATG 7 cut(s) 532, 569, 808, 968, 1414, 1789, 2385
BseJI GATNNNNATC 1 cut(s) 823
BseLI CCNNNNNNNGG 4 cut(s) 151, 902, 1545, 1978
BseMI GCAATG 2 cut(s) 951, 1323
BseMII CTCAG 2 cut(s) 1323, 2251
BseNI ACTGG 5 cut(s) 191, 501, 740, 1050, 1850
BseRI GAGGAG 1 cut(s) 1418
BseSI GKGCMC 1 cut(s) 454
BseXI GCAGC 2 cut(s) 1450, 2439
BsgI GTGCAG 2 cut(s) 1853, 1874
BshFI GGCC 4 cut(s) 1049, 1463, 1624, 2543
BshNI GGYRCC 1 cut(s) 712
BshVI ATCGAT 1 cut(s) 1824
BsiHKAI GWGCWC 4 cut(s) 454, 989, 1998, 2220
BsiHKCI CYCGRG 1 cut(s) 308
BsiSI CCGG 4 cut(s) 558, 896, 2273, 2345
BsiWI CGTACG 1 cut(s) 2247
BslI CCNNNNNNNGG 4 cut(s) 151, 902, 1545, 1978
BsmAI GTCTC 4 cut(s) 127, 1142, 1407, 1599
BsnI GGCC 4 cut(s) 1049, 1463, 1624, 2543
Bso31I GGTCTC 2 cut(s) 127, 1142
BsoBI CYCGRG 1 cut(s) 308
Bsp119I TTCGAA 1 cut(s) 1475
Bsp1286I GDGCHC 5 cut(s) 454, 989, 1850, 1998, 2220
Bsp143I GATC 9 cut(s) 141, 187, 237, 781, 818, 1003, 1067, 1483, 2503
BspACI CCGC 6 cut(s) 362, 467, 1061, 1077, 1969, 2544
BspANI GGCC 4 cut(s) 1049, 1463, 1624, 2543
BspCNI CTCAG 2 cut(s) 1322, 2250
BspDI ATCGAT 1 cut(s) 1824
BspHI TCATGA 1 cut(s) 1399
BspLI GGNNCC 3 cut(s) 189, 714, 1625
BspMAI CTGCAG 3 cut(s) 433, 837, 1993
BspMI ACCTGC 1 cut(s) 436
BspPI GGATC 7 cut(s) 136, 182, 195, 776, 826, 1478, 2511
BspT104I TTCGAA 1 cut(s) 1475
BspT107I GGYRCC 1 cut(s) 712
BspTNI GGTCTC 2 cut(s) 127, 1142
BsrDI GCAATG 2 cut(s) 951, 1323
BsrI ACTGG 5 cut(s) 191, 501, 740, 1050, 1850
BssECI CCNNGG 3 cut(s) 972, 1188, 1231
BssMI GATC 9 cut(s) 141, 187, 237, 781, 818, 1003, 1067, 1483, 2503
BssNI GRCGYC 1 cut(s) 609
BssT1I CCWWGG 3 cut(s) 972, 1188, 1231
Bst2UI CCWGG 1 cut(s) 1649
Bst4CI ACNGT 8 cut(s) 48, 232, 478, 649, 1031, 1057, 1910, 2330
Bst6I CTCTTC 2 cut(s) 834, 2432
BstACI GRCGYC 1 cut(s) 609
BstAPI GCANNNNNTGC 2 cut(s) 50, 1447
BstBAI YACGTR 1 cut(s) 2247
BstBI TTCGAA 1 cut(s) 1475
BstC8I GCNNGC 4 cut(s) 1989, 2003, 2025, 2054
BstDEI CTNAG 8 cut(s) 117, 403, 1180, 1309, 1451, 1799, 2237, 2315
BstF5I GGATG 7 cut(s) 532, 569, 808, 968, 1414, 1789, 2385
BstKTI GATC 9 cut(s) 144, 190, 240, 784, 821, 1006, 1070, 1486, 2506
BstMAI GTCTC 4 cut(s) 127, 1142, 1407, 1599
BstMBI GATC 9 cut(s) 141, 187, 237, 781, 818, 1003, 1067, 1483, 2503
BstMWI GCNNNNNNNGC 9 cut(s) 41, 50, 449, 1447, 1630, 1726, 1993, 2002, 2033
BstNI CCWGG 1 cut(s) 1649
BstNSI RCATGY 3 cut(s) 1285, 1633, 1931
BstSCI CCNGG 3 cut(s) 556, 895, 1647
BstSFI CTRYAG 4 cut(s) 429, 833, 1417, 1989
BstSLI GKGCMC 1 cut(s) 454
BstV1I GCAGC 2 cut(s) 1450, 2439
BstV2I GAAGAC 1 cut(s) 1868
BstX2I RGATCY 4 cut(s) 187, 1003, 1483, 2503
BstXI CCANNNNNNTGG 2 cut(s) 747, 1057
BstYI RGATCY 4 cut(s) 187, 1003, 1483, 2503
Bsu15I ATCGAT 1 cut(s) 1824
BsuRI GGCC 4 cut(s) 1049, 1463, 1624, 2543
BsuTUI ATCGAT 1 cut(s) 1824
BtgZI GCGATG 2 cut(s) 2017, 2547
BtsCI GGATG 7 cut(s) 532, 569, 808, 968, 1414, 1789, 2385
BveI ACCTGC 1 cut(s) 436
Cac8I GCNNGC 4 cut(s) 1989, 2003, 2025, 2054
CciI TCATGA 1 cut(s) 1399
Cfr13I GGNCC 4 cut(s) 1228, 1623, 1910, 2541
ClaI ATCGAT 1 cut(s) 1824
Csp6I GTAC 7 cut(s) 155, 212, 286, 545, 713, 1561, 2248
CviAII CATG 6 cut(s) 395, 1282, 1400, 1442, 1630, 1928
CviQI GTAC 7 cut(s) 155, 212, 286, 545, 713, 1561, 2248
DdeI CTNAG 8 cut(s) 117, 403, 1180, 1309, 1451, 1799, 2237, 2315
DpnI GATC 9 cut(s) 143, 189, 239, 783, 820, 1005, 1069, 1485, 2505
DpnII GATC 9 cut(s) 141, 187, 237, 781, 818, 1003, 1067, 1483, 2503
DraI TTTAAA 1 cut(s) 91
DrdI GACNNNNNNGTC 1 cut(s) 883
DriI GACNNNNNGTC 1 cut(s) 112
DseDI GACNNNNNNGTC 1 cut(s) 883
EaeI YGGCCR 2 cut(s) 1047, 1461
Eam1104I CTCTTC 2 cut(s) 834, 2432
Eam1105I GACNNNNNGTC 1 cut(s) 112
EarI CTCTTC 2 cut(s) 834, 2432
Ecl136II GAGCTC 3 cut(s) 987, 1996, 2218
Eco130I CCWWGG 3 cut(s) 972, 1188, 1231
Eco24I GRGCYC 4 cut(s) 989, 1850, 1998, 2220
Eco31I GGTCTC 2 cut(s) 127, 1142
Eco47I GGWCC 2 cut(s) 1228, 1910
Eco53kI GAGCTC 3 cut(s) 987, 1996, 2218
Eco57I CTGAAG 2 cut(s) 1662, 2492
Eco88I CYCGRG 1 cut(s) 308
EcoICRI GAGCTC 3 cut(s) 987, 1996, 2218
EcoRI GAATTC 1 cut(s) 845
EcoRII CCWGG 1 cut(s) 1647
EcoT14I CCWWGG 3 cut(s) 972, 1188, 1231
EcoT22I ATGCAT 1 cut(s) 1325
EcoT38I GRGCYC 4 cut(s) 989, 1850, 1998, 2220
ErhI CCWWGG 3 cut(s) 972, 1188, 1231
FaeI CATG 6 cut(s) 398, 1285, 1403, 1445, 1633, 1931
FalI AAGNNNNNCTT 2 cut(s) 2360, 2392
FatI CATG 6 cut(s) 394, 1281, 1399, 1441, 1629, 1927
FauI CCCGC 1 cut(s) 1054
FauNDI CATATG 1 cut(s) 2528
FblI GTMKAC 2 cut(s) 372, 1467
Fnu4HI GCNGC 4 cut(s) 1439, 1969, 2453, 2544
FokI GGATG 7 cut(s) 539, 576, 815, 955, 1421, 1796, 2372
FriOI GRGCYC 4 cut(s) 989, 1850, 1998, 2220
Fsp4HI GCNGC 4 cut(s) 1439, 1969, 2453, 2544
FspBI CTAG 8 cut(s) 122, 1176, 1232, 1254, 1358, 1583, 1655, 1746
GluI GCNGC 4 cut(s) 1439, 1969, 2453, 2544
GsuI CTGGAG 1 cut(s) 518
HaeIII GGCC 4 cut(s) 1049, 1463, 1624, 2543
HapII CCGG 4 cut(s) 558, 896, 2273, 2345
Hin1I GRCGYC 1 cut(s) 609
Hin1II CATG 6 cut(s) 398, 1285, 1403, 1445, 1633, 1931
HincII GTYRAC 2 cut(s) 339, 2373
HindII GTYRAC 2 cut(s) 339, 2373
HpaI GTTAAC 1 cut(s) 339
HpaII CCGG 4 cut(s) 558, 896, 2273, 2345
HphI GGTGA 2 cut(s) 788, 2441
Hpy166II GTNNAC 7 cut(s) 339, 373, 452, 1082, 1468, 1553, 2373
Hpy188I TCNGA 7 cut(s) 256, 823, 889, 1488, 1671, 1737, 2503
Hpy8I GTNNAC 7 cut(s) 339, 373, 452, 1082, 1468, 1553, 2373
HpyAV CCTTC 3 cut(s) 218, 760, 2597
HpyCH4III ACNGT 8 cut(s) 48, 232, 478, 649, 1031, 1057, 1910, 2330
HpyCH4IV ACGT 3 cut(s) 590, 609, 2246
HpyF10VI GCNNNNNNNGC 9 cut(s) 41, 50, 449, 1447, 1630, 1726, 1993, 2002, 2033
HpyF3I CTNAG 8 cut(s) 117, 403, 1180, 1309, 1451, 1799, 2237, 2315
HpySE526I ACGT 3 cut(s) 590, 609, 2246
Hsp92I GRCGYC 1 cut(s) 609
Hsp92II CATG 6 cut(s) 398, 1285, 1403, 1445, 1633, 1931
KpnI GGTACC 1 cut(s) 716
KspAI GTTAAC 1 cut(s) 339
Kzo9I GATC 9 cut(s) 141, 187, 237, 781, 818, 1003, 1067, 1483, 2503
LmnI GCTCC 2 cut(s) 396, 559
Lsp1109I GCAGC 2 cut(s) 1450, 2439
LweI GCATC 9 cut(s) 593, 977, 1174, 1240, 1716, 1774, 1830, 2250, 2601
MaeI CTAG 8 cut(s) 122, 1176, 1232, 1254, 1358, 1583, 1655, 1746
MaeII ACGT 3 cut(s) 590, 609, 2246
MaeIII GTNAC 9 cut(s) 161, 643, 874, 1264, 1368, 1421, 1923, 2324, 2568
MalI GATC 9 cut(s) 143, 189, 239, 783, 820, 1005, 1069, 1485, 2505
MboI GATC 9 cut(s) 141, 187, 237, 781, 818, 1003, 1067, 1483, 2503
MflI RGATCY 4 cut(s) 187, 1003, 1483, 2503
MhlI GDGCHC 5 cut(s) 454, 989, 1850, 1998, 2220
MlsI TGGCCA 1 cut(s) 1049
MluNI TGGCCA 1 cut(s) 1049
MlyI GAGTC 8 cut(s) 119, 741, 1301, 1858, 2126, 2320, 2357, 2470
MmeI TCCRAC 2 cut(s) 169, 460
Mox20I TGGCCA 1 cut(s) 1049
Mph1103I ATGCAT 1 cut(s) 1325
MroXI GAANNNNTTC 3 cut(s) 828, 954, 1158
MscI TGGCCA 1 cut(s) 1049
MseI TTAA 8 cut(s) 90, 197, 338, 522, 1212, 1434, 2156, 2444
MslI CAYNNNNRTG 5 cut(s) 1032, 1055, 1280, 2554, 2597
Msp20I TGGCCA 1 cut(s) 1049
MspI CCGG 4 cut(s) 558, 896, 2273, 2345
MspR9I CCNGG 3 cut(s) 558, 897, 1649
MvaI CCWGG 1 cut(s) 1649
MwoI GCNNNNNNNGC 9 cut(s) 41, 50, 449, 1447, 1630, 1726, 1993, 2002, 2033
NciI CCSGG 2 cut(s) 558, 897
NdeI CATATG 1 cut(s) 2528
NdeII GATC 9 cut(s) 141, 187, 237, 781, 818, 1003, 1067, 1483, 2503
NlaIII CATG 6 cut(s) 398, 1285, 1403, 1445, 1633, 1931
NlaIV GGNNCC 3 cut(s) 189, 714, 1625
NmeAIII GCCGAG 1 cut(s) 1881
NmuCI GTSAC 6 cut(s) 643, 874, 1368, 1421, 1923, 2324
NsiI ATGCAT 1 cut(s) 1325
NspI RCATGY 3 cut(s) 1285, 1633, 1931
NspV TTCGAA 1 cut(s) 1475
PaeR7I CTCGAG 1 cut(s) 308
PagI TCATGA 1 cut(s) 1399
PciI ACATGT 2 cut(s) 1281, 1927
PdmI GAANNNNTTC 3 cut(s) 828, 954, 1158
PfeI GAWTC 8 cut(s) 320, 415, 824, 900, 1257, 1895, 2008, 2125
Pfl23II CGTACG 1 cut(s) 2247
PflMI CCANNNNNTGG 2 cut(s) 151, 1545
PfoI TCCNGGA 2 cut(s) 556, 895
PkrI GCNGC 4 cut(s) 1440, 1970, 2454, 2545
PleI GAGTC 8 cut(s) 119, 740, 1301, 1858, 2126, 2319, 2356, 2469
PpsI GAGTC 8 cut(s) 119, 740, 1301, 1858, 2126, 2319, 2356, 2469
Ppu21I YACGTR 1 cut(s) 2247
PscI ACATGT 2 cut(s) 1281, 1927
PsiI TTATAA 1 cut(s) 708
Psp124BI GAGCTC 3 cut(s) 989, 1998, 2220
Psp1406I AACGTT 1 cut(s) 590
Psp6I CCWGG 1 cut(s) 1647
PspGI CCWGG 1 cut(s) 1647
PspLI CGTACG 1 cut(s) 2247
PspN4I GGNNCC 3 cut(s) 189, 714, 1625
PspPI GGNCC 4 cut(s) 1228, 1623, 1910, 2541
PstI CTGCAG 3 cut(s) 433, 837, 1993
PsuI RGATCY 4 cut(s) 187, 1003, 1483, 2503
RsaI GTAC 7 cut(s) 156, 213, 287, 546, 714, 1562, 2249
RsaNI GTAC 7 cut(s) 155, 212, 286, 545, 713, 1561, 2248
RseI CAYNNNNRTG 5 cut(s) 1032, 1055, 1280, 2554, 2597
SacI GAGCTC 3 cut(s) 989, 1998, 2220
SaqAI TTAA 8 cut(s) 90, 197, 338, 522, 1212, 1434, 2156, 2444
SatI GCNGC 4 cut(s) 1439, 1969, 2453, 2544
Sau3AI GATC 9 cut(s) 141, 187, 237, 781, 818, 1003, 1067, 1483, 2503
Sau96I GGNCC 4 cut(s) 1228, 1623, 1910, 2541
ScaI AGTACT 1 cut(s) 213
SchI GAGTC 8 cut(s) 119, 741, 1301, 1858, 2126, 2320, 2357, 2470
ScrFI CCNGG 3 cut(s) 558, 897, 1649
SduI GDGCHC 5 cut(s) 454, 989, 1850, 1998, 2220
SfaNI GCATC 9 cut(s) 593, 977, 1174, 1240, 1716, 1774, 1830, 2250, 2601
SfcI CTRYAG 4 cut(s) 429, 833, 1417, 1989
Sfr274I CTCGAG 1 cut(s) 308
SfuI TTCGAA 1 cut(s) 1475
SinI GGWCC 2 cut(s) 1228, 1910
SlaI CTCGAG 1 cut(s) 308
SmiMI CAYNNNNRTG 5 cut(s) 1032, 1055, 1280, 2554, 2597
SmlI CTYRAG 7 cut(s) 308, 326, 1721, 1943, 2165, 2189, 2219
SmoI CTYRAG 7 cut(s) 308, 326, 1721, 1943, 2165, 2189, 2219
SsiI CCGC 6 cut(s) 362, 467, 1061, 1077, 1969, 2544
SspMI CTAG 8 cut(s) 122, 1176, 1232, 1254, 1358, 1583, 1655, 1746
SstI GAGCTC 3 cut(s) 989, 1998, 2220
StyD4I CCNGG 3 cut(s) 556, 895, 1647
StyI CCWWGG 3 cut(s) 972, 1188, 1231
TaaI ACNGT 8 cut(s) 48, 232, 478, 649, 1031, 1057, 1910, 2330
TaiI ACGT 3 cut(s) 593, 612, 2249
TaqII GACCGA 2 cut(s) 151, 1166
TatI WGTACW 3 cut(s) 211, 285, 544
TauI GCSGC 2 cut(s) 1971, 2546
TfiI GAWTC 8 cut(s) 320, 415, 824, 900, 1257, 1895, 2008, 2125
Tru1I TTAA 8 cut(s) 90, 197, 338, 522, 1212, 1434, 2156, 2444
Tru9I TTAA 8 cut(s) 90, 197, 338, 522, 1212, 1434, 2156, 2444
TscAI CASTG 9 cut(s) 51, 237, 501, 652, 747, 1034, 1050, 1062, 1857
TseFI GTSAC 6 cut(s) 643, 874, 1368, 1421, 1923, 2324
TseI GCWGC 2 cut(s) 1438, 2452
Tsp45I GTSAC 6 cut(s) 643, 874, 1368, 1421, 1923, 2324
TspRI CASTG 9 cut(s) 51, 237, 501, 652, 747, 1034, 1050, 1062, 1857
Van91I CCANNNNNTGG 2 cut(s) 151, 1545
VneI GTGCAC 1 cut(s) 450
VpaK11BI GGWCC 2 cut(s) 1228, 1910
XceI RCATGY 3 cut(s) 1285, 1633, 1931
XcmI CCANNNNNNNNNTGG 1 cut(s) 1092
XhoI CTCGAG 1 cut(s) 308
XmaJI CCTAGG 1 cut(s) 1231
XmiI GTMKAC 2 cut(s) 372, 1467
XmnI GAANNNNTTC 3 cut(s) 828, 954, 1158
XspI CTAG 8 cut(s) 122, 1176, 1232, 1254, 1358, 1583, 1655, 1746
ZraI GACGTC 1 cut(s) 610
ZrmI AGTACT 1 cut(s) 213
Zsp2I ATGCAT 1 cut(s) 1325
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.