Rroxscaffold_4G00323740

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
Physical Location & Seq
Reverse (-)
54721738 .. 54725615
3878 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00323740.1

Sequence Viewer

Length: 1251 bp
ATGGAGTTTATTGGAGTAGTATTTGAACAGCTGTTTAAGGTCGCTCTGAAACTTGCCAAATCCATGAAGTTTCAACCCATCCTCGGACAGATCGAATCCACTCTAGTCTCTTTGAAACCATTGATCGAAGAGATGGTAGGTCTAAACATGGGTTTGAAACTGAAAAGCGAGGCAATAGATAAGTTACAAGATGAAATCCTGAAGGGCCTAGTTCTTGTCCGCAAGTGCGTCAAGTGCTCCAAGGTTAACTTCCCCAAACGGATAAAATACAAGAAAAAGCTTGAGAAATTGGATAATTTTCTCAAAAGTCTGTTACAGGAACTCAAGGTAGAGGAAACGAGGAACGTAATGTTGAACTTGCTTTTGACAACGGAAACCTCCAAAAAAGTAGATGAAATGGCAAATGATGTGAAGGAGATTTTGCTTGGGACAGTGAAACATGGCGGCCTACTGGAAGAATTGCTACAGGGTGAGGAGGAGAGCTTGCTTCTGATCCGGAAAAACTACGACCAGATTGAACGATCGGAGAAAGAACAGAAGCAGTTCAGAGGGTTGGTCGAGTGGAGTATGGTCAATGTGCCTTCAAAGGATGACTTGCCTCCAATTAATTGGGATGAAGTCAAAGCTTCCACACTTCCCGTTGGATTTGATAAACCTATGGAGGAATTGAAGACAGATCTTCTCAAAAATGGGTTCCAAATGTTGGGGCTGACTGGTCTTCAAGGATCCGGGAAAACCACATTGGCAAAACAGTTTTGTCAAGATAAGGATGTCAAAGGTACATTCAAGGACAATATCTTCTTTGTCTATGTTTCGAAAGAGCTCAGCTGTGGAGATATTGTAAGAAGGATTGTAAGGAAACTAAATAAGTACAAGAAAACTGAGTTACCTGACAACATAGATGACAAAGTAATTGCAGTTGAGTGGCTGCAACAATTTCTGAATAAAGCAGGACAAAATCCTATACTGTTAGTCTTGGATGATGTTTGGCCTGGATCGGAATTCCTTCTTAAGAAGTTCAATGAATGCAAAATGTCGAATTGCAAGATTTTGGTGACATCAATTTACAATTTTCCAGGATTTTCTAGCCGAGATTATTTTGAACCATTGGATGAATACAATGCAATCATTCTTCTTCAACATTCAGCATCCAGATATAAGCCCGCTTGTTTTACAGATGATTTTGCTAGAAAGGTAGTTGAGCGCTGCAGGGGTTTCCACTCGCCATTGAGGAGGTCGGAAGATCACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

416

Amino Acids

47.83

Weight (kDa)

8.66

Isoelectric Point (pI)

43.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RPW8 PF05659 3 - 131 4.2e-16 Arabidopsis broad-spectrum mildew resistance protein RPW8
NB-ARC PF00931 217 - 354 2e-19 NB-ARC domain
AAA_22 PF13401 234 - 329 1.1e-06 AAA domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 703
AccIII TCCGGA 1 cut(s) 495
AciI CCGC 3 cut(s) 220, 444, 1164
AclWI GGATC 4 cut(s) 487, 720, 733, 1003
AcsI RAATTY 1 cut(s) 1001
AcuI CTGAAG 1 cut(s) 221
AfaI GTAC 2 cut(s) 781, 872
AfeI AGCGCT 1 cut(s) 1205
AfiI CCNNNNNNNGG 2 cut(s) 83, 703
AflII CTTAAG 1 cut(s) 1010
AjnI CCWGG 2 cut(s) 991, 1075
AjuI GAANNNNNNNTTGG 4 cut(s) 233, 265, 725, 757
AluBI AGCT 6 cut(s) 31, 280, 483, 626, 823, 828
AluI AGCT 6 cut(s) 31, 280, 483, 626, 823, 828
Alw21I GWGCWC 2 cut(s) 239, 825
Alw26I GTCTC 1 cut(s) 112
AlwI GGATC 4 cut(s) 487, 720, 733, 1003
Aor13HI TCCGGA 1 cut(s) 495
Aor51HI AGCGCT 1 cut(s) 1205
AoxI GGCC 3 cut(s) 205, 445, 989
ApeKI GCWGC 2 cut(s) 928, 1206
ApoI RAATTY 1 cut(s) 1001
AseI ATTAAT 1 cut(s) 606
Asp700I GAANNNNTTC 2 cut(s) 542, 1005
AspLEI GCGC 1 cut(s) 1206
AspS9I GGNCC 1 cut(s) 205
AsuC2I CCSGG 1 cut(s) 730
AsuHPI GGTGA 2 cut(s) 482, 1066
AsuII TTCGAA 1 cut(s) 815
BamHI GGATCC 1 cut(s) 725
BanII GRGCYC 1 cut(s) 825
BarI GAAGNNNNNNTAC 2 cut(s) 447, 479
BbsI GAAGAC 2 cut(s) 677, 710
Bbv12I GWGCWC 2 cut(s) 239, 825
BbvI GCAGC 2 cut(s) 915, 1193
BccI CCATC 2 cut(s) 86, 127
BciT130I CCWGG 2 cut(s) 993, 1077
BcnI CCSGG 1 cut(s) 730
BcoDI GTCTC 1 cut(s) 112
BfaI CTAG 5 cut(s) 104, 209, 1086, 1188, 1249
BfmI CTRYAG 2 cut(s) 464, 1207
BfoI RGCGCY 1 cut(s) 1207
BfrI CTTAAG 1 cut(s) 1010
BglII AGATCT 1 cut(s) 676
BisI GCNGC 3 cut(s) 445, 929, 1207
BlpI GCTNAGC 1 cut(s) 824
BlsI GCNGC 3 cut(s) 446, 930, 1208
Bme1390I CCNGG 3 cut(s) 730, 993, 1077
BmgT120I GGNCC 1 cut(s) 205
BmiI GGNNCC 2 cut(s) 695, 727
BmrFI CCNGG 3 cut(s) 730, 993, 1077
BmsI GCATC 1 cut(s) 1157
BpiI GAAGAC 2 cut(s) 677, 710
Bpu1102I GCTNAGC 1 cut(s) 824
Bpu14I TTCGAA 1 cut(s) 815
BpuEI CTTGAG 2 cut(s) 302, 308
BpuMI CCSGG 1 cut(s) 730
BsaJI CCNNGG 2 cut(s) 82, 240
BsaWI WCCGGW 1 cut(s) 495
BsaXI ACNNNNNCTCC 2 cut(s) 825, 855
Bsc4I CCNNNNNNNGG 2 cut(s) 83, 703
Bse1I ACTGG 2 cut(s) 456, 718
BseAI TCCGGA 1 cut(s) 495
BseBI CCWGG 2 cut(s) 993, 1077
BseDI CCNNGG 2 cut(s) 82, 240
BseGI GGATG 7 cut(s) 78, 595, 619, 775, 985, 1117, 1148
BseLI CCNNNNNNNGG 2 cut(s) 83, 703
BseMII CTCAG 2 cut(s) 838, 873
BseNI ACTGG 2 cut(s) 456, 718
BseRI GAGGAG 3 cut(s) 488, 491, 1246
BseXI GCAGC 2 cut(s) 915, 1193
Bsh1285I CGRYCG 1 cut(s) 524
BshFI GGCC 3 cut(s) 207, 447, 991
BsiEI CGRYCG 1 cut(s) 524
BsiHKAI GWGCWC 2 cut(s) 239, 825
BsiSI CCGG 2 cut(s) 496, 729
BslFI GGGAC 1 cut(s) 442
BslI CCNNNNNNNGG 2 cut(s) 83, 703
BsmAI GTCTC 1 cut(s) 112
BsmFI GGGAC 1 cut(s) 442
BsmI GAATGC 1 cut(s) 1031
BsnI GGCC 3 cut(s) 207, 447, 991
Bsp119I TTCGAA 1 cut(s) 815
Bsp1286I GDGCHC 2 cut(s) 239, 825
Bsp13I TCCGGA 1 cut(s) 495
Bsp143I GATC 8 cut(s) 90, 123, 492, 521, 676, 725, 995, 1243
Bsp1720I GCTNAGC 1 cut(s) 824
BspACI CCGC 3 cut(s) 220, 444, 1164
BspANI GGCC 3 cut(s) 207, 447, 991
BspCNI CTCAG 2 cut(s) 837, 874
BspEI TCCGGA 1 cut(s) 495
BspLI GGNNCC 2 cut(s) 695, 727
BspMAI CTGCAG 1 cut(s) 1211
BspPI GGATC 4 cut(s) 487, 720, 733, 1003
BspT104I TTCGAA 1 cut(s) 815
BspTI CTTAAG 1 cut(s) 1010
BsrI ACTGG 2 cut(s) 456, 718
BssECI CCNNGG 2 cut(s) 82, 240
BssMI GATC 8 cut(s) 90, 123, 492, 521, 676, 725, 995, 1243
BssT1I CCWWGG 1 cut(s) 240
Bst2UI CCWGG 2 cut(s) 993, 1077
Bst4CI ACNGT 3 cut(s) 433, 753, 969
Bst6I CTCTTC 1 cut(s) 123
BstAFI CTTAAG 1 cut(s) 1010
BstBI TTCGAA 1 cut(s) 815
BstC8I GCNNGC 2 cut(s) 485, 1164
BstDEI CTNAG 2 cut(s) 824, 882
BstF5I GGATG 7 cut(s) 78, 595, 619, 775, 985, 1117, 1148
BstH2I RGCGCY 1 cut(s) 1207
BstHHI GCGC 1 cut(s) 1206
BstKTI GATC 8 cut(s) 93, 126, 495, 524, 679, 728, 998, 1246
BstMAI GTCTC 1 cut(s) 112
BstMBI GATC 8 cut(s) 90, 123, 492, 521, 676, 725, 995, 1243
BstMCI CGRYCG 1 cut(s) 524
BstMWI GCNNNNNNNGC 1 cut(s) 234
BstNI CCWGG 2 cut(s) 993, 1077
BstSCI CCNGG 3 cut(s) 728, 991, 1075
BstSFI CTRYAG 2 cut(s) 464, 1207
BstV1I GCAGC 2 cut(s) 915, 1193
BstV2I GAAGAC 2 cut(s) 677, 710
BstX2I RGATCY 2 cut(s) 676, 725
BstXI CCANNNNNNTGG 1 cut(s) 609
BstYI RGATCY 2 cut(s) 676, 725
BsuRI GGCC 3 cut(s) 207, 447, 991
BtsCI GGATG 7 cut(s) 78, 595, 619, 775, 985, 1117, 1148
BtsIMutI CAGTG 1 cut(s) 438
Cac8I GCNNGC 2 cut(s) 485, 1164
CfoI GCGC 1 cut(s) 1206
Cfr13I GGNCC 1 cut(s) 205
CseI GACGC 1 cut(s) 217
Csp6I GTAC 2 cut(s) 780, 871
CviAII CATG 3 cut(s) 64, 148, 440
CviQI GTAC 2 cut(s) 780, 871
DdeI CTNAG 2 cut(s) 824, 882
DpnI GATC 8 cut(s) 92, 125, 494, 523, 678, 727, 997, 1245
DpnII GATC 8 cut(s) 90, 123, 492, 521, 676, 725, 995, 1243
Eam1104I CTCTTC 1 cut(s) 123
EarI CTCTTC 1 cut(s) 123
Ecl136II GAGCTC 1 cut(s) 823
Eco130I CCWWGG 1 cut(s) 240
Eco24I GRGCYC 1 cut(s) 825
Eco47III AGCGCT 1 cut(s) 1205
Eco53kI GAGCTC 1 cut(s) 823
Eco57I CTGAAG 1 cut(s) 221
EcoICRI GAGCTC 1 cut(s) 823
EcoO109I RGGNCCY 1 cut(s) 205
EcoRI GAATTC 1 cut(s) 1001
EcoRII CCWGG 2 cut(s) 991, 1075
EcoT14I CCWWGG 1 cut(s) 240
EcoT38I GRGCYC 1 cut(s) 825
ErhI CCWWGG 1 cut(s) 240
FaeI CATG 3 cut(s) 67, 151, 443
FaiI YATR 9 cut(s) 65, 149, 441, 569, 659, 810, 899, 965, 1158
FalI AAGNNNNNCTT 4 cut(s) 233, 265, 578, 610
FaqI GGGAC 1 cut(s) 442
FatI CATG 3 cut(s) 63, 147, 439
FauI CCCGC 1 cut(s) 1171
Fnu4HI GCNGC 3 cut(s) 445, 929, 1207
FokI GGATG 7 cut(s) 65, 602, 626, 782, 992, 1124, 1135
FriOI GRGCYC 1 cut(s) 825
Fsp4HI GCNGC 3 cut(s) 445, 929, 1207
FspBI CTAG 5 cut(s) 104, 209, 1086, 1188, 1249
GlaI GCGC 1 cut(s) 1205
GluI GCNGC 3 cut(s) 445, 929, 1207
HaeII RGCGCY 1 cut(s) 1207
HaeIII GGCC 3 cut(s) 207, 447, 991
HapII CCGG 2 cut(s) 496, 729
HgaI GACGC 1 cut(s) 217
HhaI GCGC 1 cut(s) 1206
Hin1II CATG 3 cut(s) 67, 151, 443
Hin6I GCGC 1 cut(s) 1204
HinP1I GCGC 1 cut(s) 1204
HincII GTYRAC 1 cut(s) 247
HindII GTYRAC 1 cut(s) 247
HindIII AAGCTT 2 cut(s) 278, 624
HinfI GANTC 1 cut(s) 95
HpaI GTTAAC 1 cut(s) 247
HpaII CCGG 2 cut(s) 496, 729
HphI GGTGA 2 cut(s) 482, 1066
Hpy166II GTNNAC 1 cut(s) 247
Hpy188I TCNGA 8 cut(s) 48, 86, 492, 526, 548, 942, 1000, 1240
Hpy188III TCNNGA 4 cut(s) 199, 496, 761, 1152
Hpy8I GTNNAC 1 cut(s) 247
HpyAV CCTTC 5 cut(s) 196, 406, 591, 840, 1016
HpyCH4III ACNGT 3 cut(s) 433, 753, 969
HpyCH4IV ACGT 1 cut(s) 345
HpyCH4V TGCA 6 cut(s) 917, 931, 1029, 1044, 1124, 1209
HpyF10VI GCNNNNNNNGC 1 cut(s) 234
HpyF3I CTNAG 2 cut(s) 824, 882
HpySE526I ACGT 1 cut(s) 345
Hsp92II CATG 3 cut(s) 67, 151, 443
HspAI GCGC 1 cut(s) 1204
Kpn2I TCCGGA 1 cut(s) 495
KspAI GTTAAC 1 cut(s) 247
Kzo9I GATC 8 cut(s) 90, 123, 492, 521, 676, 725, 995, 1243
LmnI GCTCC 1 cut(s) 242
Lsp1109I GCAGC 2 cut(s) 915, 1193
LweI GCATC 1 cut(s) 1157
MaeI CTAG 5 cut(s) 104, 209, 1086, 1188, 1249
MaeII ACGT 1 cut(s) 345
MaeIII GTNAC 4 cut(s) 183, 312, 885, 1054
MalI GATC 8 cut(s) 92, 125, 494, 523, 678, 727, 997, 1245
MboI GATC 8 cut(s) 90, 123, 492, 521, 676, 725, 995, 1243
MboII GAAGA 8 cut(s) 140, 467, 671, 682, 710, 790, 1124, 1127
MflI RGATCY 2 cut(s) 676, 725
MhlI GDGCHC 2 cut(s) 239, 825
MmeI TCCRAC 2 cut(s) 622, 1218
MroI TCCGGA 1 cut(s) 495
MroXI GAANNNNTTC 2 cut(s) 542, 1005
MseI TTAA 4 cut(s) 36, 246, 606, 1011
MspA1I CMGCKG 2 cut(s) 31, 828
MspCI CTTAAG 1 cut(s) 1010
MspI CCGG 2 cut(s) 496, 729
MspR9I CCNGG 3 cut(s) 730, 993, 1077
Mva1269I GAATGC 1 cut(s) 1031
MvaI CCWGG 2 cut(s) 993, 1077
MwoI GCNNNNNNNGC 1 cut(s) 234
NciI CCSGG 1 cut(s) 730
NdeII GATC 8 cut(s) 90, 123, 492, 521, 676, 725, 995, 1243
NlaIII CATG 3 cut(s) 67, 151, 443
NlaIV GGNNCC 2 cut(s) 695, 727
NmeAIII GCCGAG 1 cut(s) 1115
NmuCI GTSAC 1 cut(s) 1054
NspV TTCGAA 1 cut(s) 815
PcsI WCGNNNNNNNCGW 1 cut(s) 90
PctI GAATGC 1 cut(s) 1031
PdmI GAANNNNTTC 2 cut(s) 542, 1005
PfeI GAWTC 1 cut(s) 95
PflMI CCANNNNNTGG 1 cut(s) 703
PfoI TCCNGGA 2 cut(s) 728, 1075
PkrI GCNGC 3 cut(s) 446, 930, 1208
Ple19I CGATCG 1 cut(s) 524
PshBI ATTAAT 1 cut(s) 606
Psp124BI GAGCTC 1 cut(s) 825
Psp6I CCWGG 2 cut(s) 991, 1075
PspGI CCWGG 2 cut(s) 991, 1075
PspN4I GGNNCC 2 cut(s) 695, 727
PspPI GGNCC 1 cut(s) 205
PstI CTGCAG 1 cut(s) 1211
PsuI RGATCY 2 cut(s) 676, 725
PvuI CGATCG 1 cut(s) 524
PvuII CAGCTG 2 cut(s) 31, 828
RsaI GTAC 2 cut(s) 781, 872
RsaNI GTAC 2 cut(s) 780, 871
SacI GAGCTC 1 cut(s) 825
SaqAI TTAA 4 cut(s) 36, 246, 606, 1011
SatI GCNGC 3 cut(s) 445, 929, 1207
Sau3AI GATC 8 cut(s) 90, 123, 492, 521, 676, 725, 995, 1243
Sau96I GGNCC 1 cut(s) 205
ScrFI CCNGG 3 cut(s) 730, 993, 1077
SduI GDGCHC 2 cut(s) 239, 825
SfaNI GCATC 1 cut(s) 1157
SfcI CTRYAG 2 cut(s) 464, 1207
SfuI TTCGAA 1 cut(s) 815
SmlI CTYRAG 3 cut(s) 281, 323, 1010
SmoI CTYRAG 3 cut(s) 281, 323, 1010
SsiI CCGC 3 cut(s) 220, 444, 1164
SspMI CTAG 5 cut(s) 104, 209, 1086, 1188, 1249
SstI GAGCTC 1 cut(s) 825
StyD4I CCNGG 3 cut(s) 728, 991, 1075
StyI CCWWGG 1 cut(s) 240
TaaI ACNGT 3 cut(s) 433, 753, 969
TaiI ACGT 1 cut(s) 348
TaqI TCGA 5 cut(s) 93, 126, 558, 815, 1037
TatI WGTACW 1 cut(s) 870
TauI GCSGC 1 cut(s) 447
TfiI GAWTC 1 cut(s) 95
Tru1I TTAA 4 cut(s) 36, 246, 606, 1011
Tru9I TTAA 4 cut(s) 36, 246, 606, 1011
TscAI CASTG 1 cut(s) 438
TseFI GTSAC 1 cut(s) 1054
TseI GCWGC 2 cut(s) 928, 1206
Tsp45I GTSAC 1 cut(s) 1054
TspDTI ATGAA 6 cut(s) 80, 207, 408, 630, 1038, 1128
TspGWI ACGGA 2 cut(s) 274, 386
TspRI CASTG 1 cut(s) 438
Van91I CCANNNNNTGG 1 cut(s) 703
Vha464I CTTAAG 1 cut(s) 1010
VspI ATTAAT 1 cut(s) 606
XapI RAATTY 1 cut(s) 1001
XmnI GAANNNNTTC 2 cut(s) 542, 1005
XspI CTAG 5 cut(s) 104, 209, 1086, 1188, 1249
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.