Rh2DG175100

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Forward (+)
15386012 .. 15389795
3784 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG175100.1

Sequence Viewer

Length: 2523 bp
ATGGCGGACCTCGCTGCAGGTGGTGCTATGGGAGTGCCGTTTACTATGCTCTATGAAGTGATTAAGGACGTGGTGATCAAGACTTCGATGTTTGAACCTCTCCTTGAAGAGCTGAAGTCGAAGATAGAAGCTTTGAATCCACTGATTGATAAGATGGACAGCTGGAATAAGGTGTTGGATCGTCCAGAGAAGGAACTTAGACAATTTAAAGTACAAATGGAGAAGGGCCGTGAGCTTATTACCAAGTGCGCCAAGCTTAGCAAGCTTAGCAAGTGGAACAGCTACAAAAAGTATAAATACAGCTACCAACTTCTTGAATTGCAGAACTCTCTTCAGAATCTGCTGTTTATACTGCAATGGCAACAAGCAAGGGATGTGAAGGAGACCTTGGTTGTAGCAAAGAATGTAGAGACGGTGGTGCAGCGAGTGGATGTCAGTGTTGCGGAATTGAAAGAAGAAGTTATGAAGGTGACCTTGGATAGAAATATAGGGACGATGGTCCAGCGGATTGATAAGAAAGGTGAGGTACAGAGCCAAATAGATTGTGAAGTACCTGAACCTCCGTTGGTTACAGTTGGATTGGATCTGCCTTTGAGGGAATTGAAGATGAAGCTTCTTAAGAATGATAATGTGTCAATGCTTGTGCTAACTGCTCCTGGAGGCTGCGGGAAAACCACATTGGCGACAAAGTTTTGCCAAGATGAGGAAGTCAAAGGTATATTCAAGAACAATATCTTCTTCATCACTGTTACAAAGAAGTCAACCTTCAACCTTATTGTACAAGGACTACATCAATGCAAGAGTACCGACGCACCTATGTTCCACAATGAAGGAACTGCTGTTAAGCGGCTGCGTAAATTTCTAAGGGAAGAAGGACAGAAACCTGTGCTGTTGGTCCTGGATGATGTTTGGCCTGAATCAGAATGTCTTCTTGAAAAATTAGATGAAGTGAAAATGCGAAATTTCAAGATTCTGGTGACATCAAGATCACAGTTTCCAGAATATGGCTCAGTTTATCCTCTAAAGTCATTGGATGATACAGATGCAATGACTCTTTTCCGCCATTCAGCATCCCTGGGAGATGGTCAATGGAACAATCTTGCTAGAGAGATCATAGCACATTGCAAGGGATATCCACTTGCAATTAAAGTGGTTGGAAAATCACTTCGCGGAAAACCAATGGTGTTCTGGCGTAAAAGAGCATTGCAGTGGTCTAAAGGTGATTCTATTATTGATTCCGAGACTGAAGTGCTTCTTTGCCTTCAAACCAGCCTAGATGCTTTGGATGAAAAAGAAGCTCTCATCAAAGAATGTTTTTTAGACCTTGGTTCATTTCCGCAAGACCAAAGAATTCCAGCAGGTGCTCTGATTGATATGTGGGCAGAGTTATATGAAGATCTCGATAAAGATTTTCTGGCCATTACAAACATGTATGAGCTTACCACCCGAAGTTTGGCTGATCTTGTAGTCACAAGGAAGGAGACAGTGGAGGACGATGACTACTACAGTGAACACTTTGTCACCCAACATGATTTGCTTAGACAGCTCGCTGTCTACCACTCCAAATTAGACCCAAGTAAAAAGCGACTGATCATTGGCAACTGTGGAGACAATCTGCCTAAGTGCTTGACTGAAAAGAAGCATCAACTGATCAAACCTCGTCTATTATCTATCTCCTCTGATGAAACGTTCTCGACAAACTTACACAACATTCAACTAGCTGATGTTGAGGTTCTAGTTCTGAATTTCAACACAAAGAGTTATGCTTTACCTGAATTTGTGGAGAAAATGGTTAATCTGAAGGTTCTAATAGTCACAAATCATGGTTTCATACCTGCTGAATTGAGTAACTTTCACCTACTGGACTCTTTACCAAATCTGAAGAGAATCAGACTAGAGCGTGTTTCAATTCCTTCTATAACCAAGCATCCCATACAGTTGAAGAGTTTAAAGAAGATCTCTTTATTCATGTGCAGTATTGGTGAATCTTTCAGCAATTGCTCCTTCCAAATTTCAAATGCATTGCCAAATTTAGAGGAACTGAATATTGACTATTGCAATGATTTGGTGAAATTGCCTGAAGAGCTCTGCAATCTGGTTCGCCTAAAGAAGCTCAGTATCACCAACTGTCATAAGCTATCTGCCTTGCCTCAAGATATTGGGAAACTGGTGAAGGTAGAAGTTTTGCGGCTAAGGTCTTGTACGGACTTGGTGAAACTCCCATGCTCAGTTAAAGACCTAAAGACATTAGATTTTCTTGACATATCTGATTGCTTCAGCATTGTGGAGTTGCCTGAAGACATTGGTGAGCTGAGCAGTTTAAGAAAGATCAACATGAGACAGTGCTCTAGATTGCAAGAACTCCCCTTATCAATTCTGGATCTTCAGAAACTAGAGGAAGTGATATGCGATGAAGAGACAGCAGGGCTGTGGGAACCCTTCTCATCCGGACTTTGCAACGGAGTAGTAAAGGAAGTCAAAGAAGAATTCAGCCTAGATTGGCTCCAAAAGTTTCAATATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

840

Amino Acids

95.82

Weight (kDa)

6.05

Isoelectric Point (pI)

36.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RPW8 PF05659 2 - 140 7.9e-28 Arabidopsis broad-spectrum mildew resistance protein RPW8
NB-ARC PF00931 198 - 331 3.5e-17 NB-ARC domain
LRR_14 PF23598 694 - 757 3.5e-07 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 8, 1349
Acc36I ACCTGC 3 cut(s) 8, 1349, 1843
AccB7I CCANNNNNTGG 1 cut(s) 1004
AccI GTMKAC 1 cut(s) 1554
AccII CGCG 1 cut(s) 1170
AccIII TCCGGA 1 cut(s) 2447
AciI CCGC 9 cut(s) 5, 443, 505, 666, 847, 1060, 1170, 1337, 2188
AclI AACGTT 1 cut(s) 1688
AclWI GGATC 3 cut(s) 186, 591, 2388
AcoI YGGCCR 1 cut(s) 1416
AcsI RAATTY 8 cut(s) 857, 961, 1350, 1744, 1775, 2010, 2029, 2486
AcuI CTGAAG 9 cut(s) 134, 317, 1266, 1820, 1901, 2100, 2260, 2316, 2369
AfaI GTAC 6 cut(s) 213, 528, 552, 780, 805, 2203
AfiI CCNNNNNNNGG 3 cut(s) 703, 1004, 1453
AflII CTTAAG 1 cut(s) 617
AflIII ACRYGT 1 cut(s) 1428
AjiI CACGTC 1 cut(s) 70
AjnI CCWGG 3 cut(s) 655, 897, 1074
AjuI GAANNNNNNNTTGG 8 cut(s) 158, 190, 371, 403, 458, 490, 662, 694
Alw21I GWGCWC 3 cut(s) 1366, 2088, 2348
Alw26I GTCTC 7 cut(s) 377, 404, 1235, 1475, 1602, 2332, 2411
AlwI GGATC 3 cut(s) 186, 591, 2388
AlwNI CAGNNNCTG 1 cut(s) 340
Aor13HI TCCGGA 1 cut(s) 2447
AoxI GGCC 3 cut(s) 226, 911, 1416
ApeKI GCWGC 4 cut(s) 14, 421, 663, 850
ApoI RAATTY 8 cut(s) 857, 961, 1350, 1744, 1775, 2010, 2029, 2486
Asp700I GAANNNNTTC 2 cut(s) 927, 1251
AspLEI GCGC 1 cut(s) 251
AspS9I GGNCC 4 cut(s) 7, 226, 499, 895
AvaII GGWCC 3 cut(s) 7, 499, 895
BalI TGGCCA 1 cut(s) 1418
BanII GRGCYC 1 cut(s) 2088
BbsI GAAGAC 2 cut(s) 920, 2304
Bbv12I GWGCWC 3 cut(s) 1366, 2088, 2348
BbvI GCAGC 3 cut(s) 433, 650, 837
BccI CCATC 3 cut(s) 148, 490, 1076
BceAI ACGGC 2 cut(s) 22, 213
BciT130I CCWGG 3 cut(s) 657, 899, 1076
BclI TGATCA 3 cut(s) 75, 1590, 1650
BcoDI GTCTC 7 cut(s) 377, 404, 1235, 1475, 1602, 2332, 2411
BfaI CTAG 8 cut(s) 1104, 1274, 1718, 1736, 1895, 2349, 2393, 2495
BfmI CTRYAG 2 cut(s) 15, 1504
BfrI CTTAAG 1 cut(s) 617
BfuAI ACCTGC 3 cut(s) 8, 1349, 1843
BglII AGATCT 2 cut(s) 1396, 1956
BisI GCNGC 6 cut(s) 15, 422, 664, 848, 851, 2189
BlpI GCTNAGC 3 cut(s) 257, 266, 2312
BlsI GCNGC 6 cut(s) 16, 423, 665, 849, 852, 2190
Bme1390I CCNGG 3 cut(s) 657, 899, 1076
Bme18I GGWCC 3 cut(s) 7, 499, 895
BmgBI CACGTC 1 cut(s) 70
BmgT120I GGNCC 4 cut(s) 7, 226, 499, 895
BmiI GGNNCC 2 cut(s) 2436, 2504
BmrFI CCNGG 3 cut(s) 657, 899, 1076
BmsI GCATC 5 cut(s) 1033, 1079, 1267, 1651, 1936
BoxI GACNNNNGTC 1 cut(s) 497
BpiI GAAGAC 2 cut(s) 920, 2304
BpmI CTGGAG 1 cut(s) 678
Bpu10I CCTNAGC 1 cut(s) 2192
Bpu1102I GCTNAGC 3 cut(s) 257, 266, 2312
BpuEI CTTGAG 1 cut(s) 2136
BsaI GGTCTC 1 cut(s) 377
BsaJI CCNNGG 5 cut(s) 387, 474, 1074, 1075, 1324
BsaWI WCCGGW 1 cut(s) 2447
Bsc4I CCNNNNNNNGG 3 cut(s) 703, 1004, 1453
Bse1I ACTGG 2 cut(s) 1866, 2172
Bse3DI GCAATG 6 cut(s) 362, 1053, 1120, 1202, 2021, 2065
BseAI TCCGGA 1 cut(s) 2447
BseBI CCWGG 3 cut(s) 657, 899, 1076
BseDI CCNNGG 5 cut(s) 387, 474, 1074, 1075, 1324
BseGI GGATG 8 cut(s) 379, 436, 907, 1039, 1070, 1291, 1927, 2444
BseLI CCNNNNNNNGG 3 cut(s) 703, 1004, 1453
BseMI GCAATG 6 cut(s) 362, 1053, 1120, 1202, 2021, 2065
BseMII CTCAG 4 cut(s) 1023, 2128, 2241, 2303
BseNI ACTGG 2 cut(s) 1866, 2172
BseRI GAGGAG 1 cut(s) 1666
BseXI GCAGC 3 cut(s) 433, 650, 837
BsgI GTGCAG 2 cut(s) 440, 1993
Bsh1236I CGCG 1 cut(s) 1170
BshFI GGCC 3 cut(s) 228, 913, 1418
BsiHKAI GWGCWC 3 cut(s) 1366, 2088, 2348
BsiSI CCGG 1 cut(s) 2448
BslFI GGGAC 1 cut(s) 505
BslI CCNNNNNNNGG 3 cut(s) 703, 1004, 1453
BsmAI GTCTC 7 cut(s) 377, 404, 1235, 1475, 1602, 2332, 2411
BsmBI CGTCTC 1 cut(s) 404
BsmFI GGGAC 1 cut(s) 505
BsnI GGCC 3 cut(s) 228, 913, 1418
Bso31I GGTCTC 1 cut(s) 377
Bsp1286I GDGCHC 3 cut(s) 1366, 2088, 2348
Bsp13I TCCGGA 1 cut(s) 2447
Bsp1407I TGTACA 1 cut(s) 778
Bsp1720I GCTNAGC 3 cut(s) 257, 266, 2312
BspACI CCGC 9 cut(s) 5, 443, 505, 666, 847, 1060, 1170, 1337, 2188
BspANI GGCC 3 cut(s) 228, 913, 1418
BspCNI CTCAG 4 cut(s) 1022, 2127, 2240, 2304
BspEI TCCGGA 1 cut(s) 2447
BspFNI CGCG 1 cut(s) 1170
BspLI GGNNCC 2 cut(s) 2436, 2504
BspMAI CTGCAG 1 cut(s) 19
BspMI ACCTGC 3 cut(s) 8, 1349, 1843
BspPI GGATC 3 cut(s) 186, 591, 2388
BspQI GCTCTTC 2 cut(s) 102, 2076
BspTI CTTAAG 1 cut(s) 617
BspTNI GGTCTC 1 cut(s) 377
BsrDI GCAATG 6 cut(s) 362, 1053, 1120, 1202, 2021, 2065
BsrGI TGTACA 1 cut(s) 778
BsrI ACTGG 2 cut(s) 1866, 2172
BssECI CCNNGG 5 cut(s) 387, 474, 1074, 1075, 1324
BssT1I CCWWGG 3 cut(s) 387, 474, 1324
Bst2UI CCWGG 3 cut(s) 657, 899, 1076
Bst6I CTCTTC 6 cut(s) 102, 336, 1877, 1937, 2076, 2409
BstAFI CTTAAG 1 cut(s) 617
BstAPI GCANNNNNTGC 1 cut(s) 23
BstAUI TGTACA 1 cut(s) 778
BstC8I GCNNGC 2 cut(s) 263, 1548
BstEII GGTNACC 1 cut(s) 469
BstF5I GGATG 8 cut(s) 379, 436, 907, 1039, 1070, 1291, 1927, 2444
BstFNI CGCG 1 cut(s) 1170
BstHHI GCGC 1 cut(s) 251
BstMAI GTCTC 7 cut(s) 377, 404, 1235, 1475, 1602, 2332, 2411
BstMWI GCNNNNNNNGC 6 cut(s) 11, 23, 262, 267, 1543, 2083
BstNI CCWGG 3 cut(s) 657, 899, 1076
BstNSI RCATGY 1 cut(s) 1432
BstPAI GACNNNNGTC 1 cut(s) 497
BstPI GGTNACC 1 cut(s) 469
BstSCI CCNGG 3 cut(s) 655, 897, 1074
BstSFI CTRYAG 2 cut(s) 15, 1504
BstUI CGCG 1 cut(s) 1170
BstV1I GCAGC 3 cut(s) 433, 650, 837
BstV2I GAAGAC 2 cut(s) 920, 2304
BstX2I RGATCY 4 cut(s) 583, 1396, 1956, 2380
BstYI RGATCY 4 cut(s) 583, 1396, 1956, 2380
BsuRI GGCC 3 cut(s) 228, 913, 1418
BtgZI GCGATG 1 cut(s) 2424
BtrI CACGTC 1 cut(s) 70
BtsCI GGATG 8 cut(s) 379, 436, 907, 1039, 1070, 1291, 1927, 2444
BtsI GCAGTG 1 cut(s) 1214
BtsIMutI CAGTG 7 cut(s) 140, 442, 744, 1214, 1491, 1513, 2348
BveI ACCTGC 3 cut(s) 8, 1349, 1843
Cac8I GCNNGC 2 cut(s) 263, 1548
CaiI CAGNNNCTG 1 cut(s) 340
CfoI GCGC 1 cut(s) 251
Cfr13I GGNCC 4 cut(s) 7, 226, 499, 895
CseI GACGC 1 cut(s) 818
Csp6I GTAC 6 cut(s) 212, 527, 551, 779, 804, 2202
CspCI CAANNNNNGTGG 2 cut(s) 1131, 1166
CviAII CATG 6 cut(s) 1429, 1529, 1823, 1969, 2223, 2335
CviQI GTAC 6 cut(s) 212, 527, 551, 779, 804, 2202
DraI TTTAAA 2 cut(s) 208, 1950
EaeI YGGCCR 1 cut(s) 1416
Eam1104I CTCTTC 6 cut(s) 102, 336, 1877, 1937, 2076, 2409
EarI CTCTTC 6 cut(s) 102, 336, 1877, 1937, 2076, 2409
EciI GGCGGA 2 cut(s) 20, 1049
Ecl136II GAGCTC 1 cut(s) 2086
Eco130I CCWWGG 3 cut(s) 387, 474, 1324
Eco24I GRGCYC 1 cut(s) 2088
Eco31I GGTCTC 1 cut(s) 377
Eco32I GATATC 1 cut(s) 1133
Eco47I GGWCC 3 cut(s) 7, 499, 895
Eco53kI GAGCTC 1 cut(s) 2086
Eco57I CTGAAG 9 cut(s) 134, 317, 1266, 1820, 1901, 2100, 2260, 2316, 2369
Eco91I GGTNACC 1 cut(s) 469
EcoICRI GAGCTC 1 cut(s) 2086
EcoO65I GGTNACC 1 cut(s) 469
EcoRI GAATTC 2 cut(s) 1350, 2486
EcoRII CCWGG 3 cut(s) 655, 897, 1074
EcoRV GATATC 1 cut(s) 1133
EcoT14I CCWWGG 3 cut(s) 387, 474, 1324
EcoT22I ATGCAT 1 cut(s) 2023
EcoT38I GRGCYC 1 cut(s) 2088
ErhI CCWWGG 3 cut(s) 387, 474, 1324
Esp3I CGTCTC 1 cut(s) 404
FaeI CATG 6 cut(s) 1432, 1532, 1826, 1972, 2226, 2338
FalI AAGNNNNNCTT 8 cut(s) 371, 403, 458, 490, 749, 781, 1239, 1271
FaqI GGGAC 1 cut(s) 505
FatI CATG 6 cut(s) 1428, 1528, 1822, 1968, 2222, 2334
FauI CCCGC 1 cut(s) 659
FbaI TGATCA 3 cut(s) 75, 1590, 1650
FblI GTMKAC 1 cut(s) 1554
Fnu4HI GCNGC 6 cut(s) 15, 422, 664, 848, 851, 2189
FokI GGATG 8 cut(s) 386, 443, 914, 1046, 1057, 1298, 1914, 2431
FriOI GRGCYC 1 cut(s) 2088
Fsp4HI GCNGC 6 cut(s) 15, 422, 664, 848, 851, 2189
FspBI CTAG 8 cut(s) 1104, 1274, 1718, 1736, 1895, 2349, 2393, 2495
GlaI GCGC 1 cut(s) 250
GluI GCNGC 6 cut(s) 15, 422, 664, 848, 851, 2189
GsuI CTGGAG 1 cut(s) 678
HaeIII GGCC 3 cut(s) 228, 913, 1418
HapII CCGG 1 cut(s) 2448
HgaI GACGC 1 cut(s) 818
HhaI GCGC 1 cut(s) 251
Hin1II CATG 6 cut(s) 1432, 1532, 1826, 1972, 2226, 2338
Hin6I GCGC 1 cut(s) 249
HinP1I GCGC 1 cut(s) 249
HincII GTYRAC 1 cut(s) 762
HindII GTYRAC 1 cut(s) 762
HindIII AAGCTT 4 cut(s) 129, 254, 263, 611
HpaII CCGG 1 cut(s) 2448
Hpy166II GTNNAC 4 cut(s) 42, 762, 1511, 1555
Hpy8I GTNNAC 4 cut(s) 42, 762, 1511, 1555
Hpy99I CGWCG 1 cut(s) 812
HpyCH4IV ACGT 2 cut(s) 69, 1688
HpyF10VI GCNNNNNNNGC 6 cut(s) 11, 23, 262, 267, 1543, 2083
HpySE526I ACGT 2 cut(s) 69, 1688
Hsp92II CATG 6 cut(s) 1432, 1532, 1826, 1972, 2226, 2338
HspAI GCGC 1 cut(s) 249
Kpn2I TCCGGA 1 cut(s) 2447
Ksp22I TGATCA 3 cut(s) 75, 1590, 1650
LguI GCTCTTC 2 cut(s) 102, 2076
LmnI GCTCC 3 cut(s) 658, 2006, 2508
Lsp1109I GCAGC 3 cut(s) 433, 650, 837
LweI GCATC 5 cut(s) 1033, 1079, 1267, 1651, 1936
MaeI CTAG 8 cut(s) 1104, 1274, 1718, 1736, 1895, 2349, 2393, 2495
MaeII ACGT 2 cut(s) 69, 1688
MaeIII GTNAC 8 cut(s) 469, 568, 748, 976, 1468, 1519, 1813, 1847
MfeI CAATTG 1 cut(s) 1996
MflI RGATCY 4 cut(s) 583, 1396, 1956, 2380
MhlI GDGCHC 3 cut(s) 1366, 2088, 2348
MlsI TGGCCA 1 cut(s) 1418
MluNI TGGCCA 1 cut(s) 1418
MlyI GAGTC 2 cut(s) 1045, 1859
MmeI TCCRAC 3 cut(s) 156, 556, 1135
Mox20I TGGCCA 1 cut(s) 1418
Mph1103I ATGCAT 1 cut(s) 2023
MroI TCCGGA 1 cut(s) 2447
MroXI GAANNNNTTC 2 cut(s) 927, 1251
MscI TGGCCA 1 cut(s) 1418
MseI TTAA 9 cut(s) 63, 207, 618, 843, 1146, 1794, 1949, 2232, 2321
MslI CAYNNNNRTG 1 cut(s) 1207
Msp20I TGGCCA 1 cut(s) 1418
MspA1I CMGCKG 2 cut(s) 162, 505
MspCI CTTAAG 1 cut(s) 617
MspI CCGG 1 cut(s) 2448
MspR9I CCNGG 3 cut(s) 657, 899, 1076
MunI CAATTG 1 cut(s) 1996
MvaI CCWGG 3 cut(s) 657, 899, 1076
MvnI CGCG 1 cut(s) 1170
MwoI GCNNNNNNNGC 6 cut(s) 11, 23, 262, 267, 1543, 2083
NlaIII CATG 6 cut(s) 1432, 1532, 1826, 1972, 2226, 2338
NlaIV GGNNCC 2 cut(s) 2436, 2504
NmuCI GTSAC 5 cut(s) 469, 976, 1468, 1519, 1813
NsiI ATGCAT 1 cut(s) 2023
NspI RCATGY 1 cut(s) 1432
PaqCI CACCTGC 2 cut(s) 8, 1349
PasI CCCWGGG 1 cut(s) 1075
PciI ACATGT 1 cut(s) 1428
PciSI GCTCTTC 2 cut(s) 102, 2076
PdmI GAANNNNTTC 2 cut(s) 927, 1251
PfeI GAWTC 8 cut(s) 136, 337, 917, 970, 1223, 1235, 1887, 1985
PflMI CCANNNNNTGG 1 cut(s) 1004
PfoI TCCNGGA 2 cut(s) 655, 897
PkrI GCNGC 6 cut(s) 16, 423, 665, 849, 852, 2190
PleI GAGTC 2 cut(s) 1045, 1859
PpsI GAGTC 2 cut(s) 1045, 1859
PscI ACATGT 1 cut(s) 1428
PshAI GACNNNNGTC 1 cut(s) 497
Psp124BI GAGCTC 1 cut(s) 2088
Psp1406I AACGTT 1 cut(s) 1688
Psp6I CCWGG 3 cut(s) 655, 897, 1074
PspEI GGTNACC 1 cut(s) 469
PspGI CCWGG 3 cut(s) 655, 897, 1074
PspN4I GGNNCC 2 cut(s) 2436, 2504
PspPI GGNCC 4 cut(s) 7, 226, 499, 895
PstI CTGCAG 1 cut(s) 19
PstNI CAGNNNCTG 1 cut(s) 340
PsuI RGATCY 4 cut(s) 583, 1396, 1956, 2380
PvuII CAGCTG 1 cut(s) 162
RsaI GTAC 6 cut(s) 213, 528, 552, 780, 805, 2203
RsaNI GTAC 6 cut(s) 212, 527, 551, 779, 804, 2202
RseI CAYNNNNRTG 1 cut(s) 1207
SacI GAGCTC 1 cut(s) 2088
SapI GCTCTTC 2 cut(s) 102, 2076
SaqAI TTAA 9 cut(s) 63, 207, 618, 843, 1146, 1794, 1949, 2232, 2321
SatI GCNGC 6 cut(s) 15, 422, 664, 848, 851, 2189
Sau96I GGNCC 4 cut(s) 7, 226, 499, 895
SchI GAGTC 2 cut(s) 1045, 1859
ScrFI CCNGG 3 cut(s) 657, 899, 1076
SduI GDGCHC 3 cut(s) 1366, 2088, 2348
SfaNI GCATC 5 cut(s) 1033, 1079, 1267, 1651, 1936
SfcI CTRYAG 2 cut(s) 15, 1504
SinI GGWCC 3 cut(s) 7, 499, 895
SmiMI CAYNNNNRTG 1 cut(s) 1207
SmlI CTYRAG 2 cut(s) 617, 2151
SmoI CTYRAG 2 cut(s) 617, 2151
SsiI CCGC 9 cut(s) 5, 443, 505, 666, 847, 1060, 1170, 1337, 2188
SspI AATATT 2 cut(s) 2047, 2519
SspMI CTAG 8 cut(s) 1104, 1274, 1718, 1736, 1895, 2349, 2393, 2495
SstI GAGCTC 1 cut(s) 2088
StyD4I CCNGG 3 cut(s) 655, 897, 1074
StyI CCWWGG 3 cut(s) 387, 474, 1324
TaiI ACGT 2 cut(s) 72, 1691
TaqI TCGA 4 cut(s) 86, 119, 1401, 1694
TatI WGTACW 2 cut(s) 211, 778
TauI GCSGC 2 cut(s) 850, 2191
TfiI GAWTC 8 cut(s) 136, 337, 917, 970, 1223, 1235, 1887, 1985
Tru1I TTAA 9 cut(s) 63, 207, 618, 843, 1146, 1794, 1949, 2232, 2321
Tru9I TTAA 9 cut(s) 63, 207, 618, 843, 1146, 1794, 1949, 2232, 2321
TscAI CASTG 7 cut(s) 147, 442, 751, 1214, 1491, 1513, 2348
TseFI GTSAC 5 cut(s) 469, 976, 1468, 1519, 1813
TseI GCWGC 4 cut(s) 14, 421, 663, 850
Tsp45I GTSAC 5 cut(s) 469, 976, 1468, 1519, 1813
TspGWI ACGGA 3 cut(s) 552, 2219, 2475
TspRI CASTG 7 cut(s) 147, 442, 751, 1214, 1491, 1513, 2348
Van91I CCANNNNNTGG 1 cut(s) 1004
Vha464I CTTAAG 1 cut(s) 617
VpaK11BI GGWCC 3 cut(s) 7, 499, 895
XapI RAATTY 8 cut(s) 857, 961, 1350, 1744, 1775, 2010, 2029, 2486
XbaI TCTAGA 1 cut(s) 2348
XceI RCATGY 1 cut(s) 1432
XcmI CCANNNNNNNNNTGG 2 cut(s) 1185, 1450
XmiI GTMKAC 1 cut(s) 1554
XmnI GAANNNNTTC 2 cut(s) 927, 1251
XspI CTAG 8 cut(s) 1104, 1274, 1718, 1736, 1895, 2349, 2393, 2495
Zsp2I ATGCAT 1 cut(s) 2023
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.