Rmu_sc0019728.1_g000001

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0019728.1
OG0000039
Physical Location & Seq
Forward (+)
160 .. 2235
2076 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0019728.1_g000001.1.cds

Sequence Viewer

Length: 1107 bp
atggccaatccagtggatgttttcgccggggctggtggaggattactattcaatgtgctctatgatggcctcaaggagctgaccaccaagtatgtgctgttcaaatacgtcctcaaaagcgtcaaatccacactcgaatctctggagcaagtggttcaagagatagcacgacttaacgaggatctggatcgcccggaggaagaactagcgggtctaaaaacccaactacaggagggtgaagtgctcgttgccaagtgcggcaaggttcgtgtgtggagtgtgtacaagaagtacaagtactccaggaaacttcttggatggaatgacagtcttaaagaacagttggagatgctcaaagttcatgcaataagagatgggaaggagaccctgacaacggtgaagagaacagagaagactgtgagccaaatcaaatcgaccagtttcagtataaaggagggagtggagcaaattgaaaccaacactgcaaatctacaggtggtggtaagccgagtggaagcgagagtttcgaatatagaggctgggataaagcagatacaaccggaagctaaaattgaagcttggtgtgcagtacctgaacttccaactgttacagttggattggatgggcctttgaacgaactgaagatgaagttgttcaacaatggagtgtcaatggttgtgctgaccgctcccggaggatgtggaaaaaccactttggcaacaaagttctgtcaagatgagcaagtccaaggagtggtcccttttataaggaaaggagtcactctcctttacattttcttcaatgtgggacaagaagtccttcttctagtcttcaaagtatattgtgaaggcatattgtcatggttgggaagttggcttcccggcaagctcttgagcacttccgattaccgcggcgtagcttggatatcgagctacgggatgcatatcgctgttgggtcccaccatggcttgtgggcccccgaaagagcaccatcgccagtgcaagctccacaaccgctagtaccacaactagacactagtgcaggctccgccaacccgctagccaaagccatcctccgctggccatccttgccaccactccgctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
NB-ARC RPW8

Protein Analysis

368

Amino Acids

40.55

Weight (kDa)

8.77

Isoelectric Point (pI)

40.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 767
AccB7I CCANNNNNTGG 1 cut(s) 754
AccBSI CCGCTC 1 cut(s) 689
AccII CGCG 1 cut(s) 912
AclWI GGATC 2 cut(s) 189, 195
AcoI YGGCCR 2 cut(s) 3, 1082
AcuI CTGAAG 1 cut(s) 662
AfaI GTAC 5 cut(s) 284, 293, 299, 591, 1023
AfiI CCNNNNNNNGG 3 cut(s) 229, 394, 754
AgsI TTSAA 9 cut(s) 52, 103, 158, 473, 575, 634, 658, 802, 835
AhdI GACNNNNNGTC 1 cut(s) 815
AhlI ACTAGT 1 cut(s) 1037
AjnI CCWGG 1 cut(s) 302
AluBI AGCT 7 cut(s) 79, 566, 578, 889, 920, 933, 1007
AluI AGCT 7 cut(s) 79, 566, 578, 889, 920, 933, 1007
Alw21I GWGCWC 4 cut(s) 60, 246, 899, 991
Alw26I GTCTC 1 cut(s) 377
AlwI GGATC 2 cut(s) 189, 195
AlwNI CAGNNNCTG 1 cut(s) 593
AoxI GGCC 5 cut(s) 3, 67, 626, 975, 1082
ApaI GGGCCC 1 cut(s) 979
Asp700I GAANNNNTTC 2 cut(s) 653, 819
AspS9I GGNCC 5 cut(s) 626, 757, 957, 975, 976
AsuC2I CCSGG 4 cut(s) 28, 194, 693, 882
AsuHPI GGTGA 2 cut(s) 248, 409
AsuII TTCGAA 1 cut(s) 527
AsuNHI GCTAGC 1 cut(s) 1060
AvaII GGWCC 2 cut(s) 757, 957
BaeGI GKGCMC 1 cut(s) 979
BalI TGGCCA 2 cut(s) 5, 1084
BanII GRGCYC 1 cut(s) 979
BarI GAAGNNNNNNTAC 4 cut(s) 281, 313, 582, 614
BbsI GAAGAC 2 cut(s) 419, 823
Bbv12I GWGCWC 4 cut(s) 60, 246, 899, 991
BccI CCATC 7 cut(s) 59, 312, 368, 617, 1000, 1079, 1093
BciT130I CCWGG 1 cut(s) 304
BcnI CCSGG 4 cut(s) 28, 194, 693, 882
BcoDI GTCTC 1 cut(s) 377
BcuI ACTAGT 1 cut(s) 1037
BfaI CTAG 7 cut(s) 206, 827, 1019, 1031, 1038, 1061, 1105
BfmI CTRYAG 2 cut(s) 227, 491
BisI GCNGC 2 cut(s) 259, 913
BlsI GCNGC 2 cut(s) 260, 914
BmcAI AGTACT 1 cut(s) 299
Bme1390I CCNGG 5 cut(s) 28, 194, 304, 693, 882
Bme18I GGWCC 2 cut(s) 757, 957
BmeRI GACNNNNNGTC 1 cut(s) 815
BmgT120I GGNCC 5 cut(s) 626, 757, 957, 975, 976
BmiI GGNNCC 6 cut(s) 759, 958, 959, 977, 978, 1048
BmrFI CCNGG 5 cut(s) 28, 194, 304, 693, 882
BmsI GCATC 2 cut(s) 339, 930
BmtI GCTAGC 1 cut(s) 1064
BpiI GAAGAC 2 cut(s) 419, 823
BplI GAGNNNNNCTC 2 cut(s) 768, 800
BpmI CTGGAG 2 cut(s) 164, 286
Bpu14I TTCGAA 1 cut(s) 527
BpuEI CTTGAG 2 cut(s) 56, 913
BpuMI CCSGG 4 cut(s) 28, 194, 693, 882
BsaBI GATNNNNATC 2 cut(s) 186, 944
BsaI GGTCTC 1 cut(s) 377
BsaJI CCNNGG 4 cut(s) 27, 748, 910, 964
BsaWI WCCGGW 1 cut(s) 559
BsaXI ACNNNNNCTCC 2 cut(s) 284, 314
Bsc4I CCNNNNNNNGG 3 cut(s) 229, 394, 754
Bse1I ACTGG 3 cut(s) 11, 438, 998
Bse8I GATNNNNATC 2 cut(s) 186, 944
BseBI CCWGG 1 cut(s) 304
BseDI CCNNGG 4 cut(s) 27, 748, 910, 964
BseGI GGATG 7 cut(s) 22, 323, 628, 704, 945, 1071, 1085
BseJI GATNNNNATC 2 cut(s) 186, 944
BseLI CCNNNNNNNGG 3 cut(s) 229, 394, 754
BseNI ACTGG 3 cut(s) 11, 438, 998
BseSI GKGCMC 1 cut(s) 979
BseYI CCCAGC 1 cut(s) 539
BsgI GTGCAG 2 cut(s) 606, 1062
Bsh1236I CGCG 1 cut(s) 912
BshFI GGCC 5 cut(s) 5, 69, 628, 977, 1084
BsiHKAI GWGCWC 4 cut(s) 60, 246, 899, 991
BsiSI CCGG 5 cut(s) 27, 194, 560, 693, 882
BslFI GGGAC 3 cut(s) 743, 822, 943
BslI CCNNNNNNNGG 3 cut(s) 229, 394, 754
BsmAI GTCTC 1 cut(s) 377
BsmFI GGGAC 3 cut(s) 743, 822, 943
BsnI GGCC 5 cut(s) 5, 69, 628, 977, 1084
Bso31I GGTCTC 1 cut(s) 377
Bsp119I TTCGAA 1 cut(s) 527
Bsp120I GGGCCC 1 cut(s) 975
Bsp1286I GDGCHC 5 cut(s) 60, 246, 899, 979, 991
Bsp1407I TGTACA 1 cut(s) 282
Bsp143I GATC 2 cut(s) 181, 187
Bsp19I CCATGG 1 cut(s) 964
BspANI GGCC 5 cut(s) 5, 69, 628, 977, 1084
BspFNI CGCG 1 cut(s) 912
BspLI GGNNCC 6 cut(s) 759, 958, 959, 977, 978, 1048
BspOI GCTAGC 1 cut(s) 1064
BspPI GGATC 2 cut(s) 189, 195
BspT104I TTCGAA 1 cut(s) 527
BspTNI GGTCTC 1 cut(s) 377
BsrBI CCGCTC 1 cut(s) 689
BsrGI TGTACA 1 cut(s) 282
BsrI ACTGG 3 cut(s) 11, 438, 998
BssECI CCNNGG 4 cut(s) 27, 748, 910, 964
BssMI GATC 2 cut(s) 181, 187
BssT1I CCWWGG 2 cut(s) 748, 964
Bst2UI CCWGG 1 cut(s) 304
Bst4CI ACNGT 6 cut(s) 329, 342, 397, 418, 607, 613
Bst6I CTCTTC 1 cut(s) 395
BstAUI TGTACA 1 cut(s) 282
BstBI TTCGAA 1 cut(s) 527
BstC8I GCNNGC 5 cut(s) 887, 1005, 1045, 1062, 1082
BstDSI CCRYGG 2 cut(s) 910, 964
BstF5I GGATG 7 cut(s) 22, 323, 628, 704, 945, 1071, 1085
BstFNI CGCG 1 cut(s) 912
BstKTI GATC 2 cut(s) 184, 190
BstMAI GTCTC 1 cut(s) 377
BstMBI GATC 2 cut(s) 181, 187
BstMWI GCNNNNNNNGC 3 cut(s) 584, 1049, 1090
BstNI CCWGG 1 cut(s) 304
BstSCI CCNGG 5 cut(s) 26, 192, 302, 691, 880
BstSFI CTRYAG 2 cut(s) 227, 491
BstSLI GKGCMC 1 cut(s) 979
BstUI CGCG 1 cut(s) 912
BstV2I GAAGAC 2 cut(s) 419, 823
BstX2I RGATCY 1 cut(s) 181
BstXI CCANNNNNNTGG 1 cut(s) 13
BstYI RGATCY 1 cut(s) 181
BsuRI GGCC 5 cut(s) 5, 69, 628, 977, 1084
BtgI CCRYGG 2 cut(s) 910, 964
BtgZI GCGATG 1 cut(s) 978
BtsCI GGATG 7 cut(s) 22, 323, 628, 704, 945, 1071, 1085
BtsI GCAGTG 1 cut(s) 480
BtsIMutI CAGTG 3 cut(s) 18, 480, 1005
Cac8I GCNNGC 5 cut(s) 887, 1005, 1045, 1062, 1082
CaiI CAGNNNCTG 1 cut(s) 593
Cfr13I GGNCC 5 cut(s) 626, 757, 957, 975, 976
Cfr42I CCGCGG 1 cut(s) 913
CseI GACGC 1 cut(s) 109
Csp6I GTAC 5 cut(s) 283, 292, 298, 590, 1022
CviAII CATG 3 cut(s) 362, 861, 965
CviQI GTAC 5 cut(s) 283, 292, 298, 590, 1022
DpnI GATC 2 cut(s) 183, 189
DpnII GATC 2 cut(s) 181, 187
DriI GACNNNNNGTC 1 cut(s) 815
EaeI YGGCCR 2 cut(s) 3, 1082
Eam1104I CTCTTC 1 cut(s) 395
Eam1105I GACNNNNNGTC 1 cut(s) 815
EarI CTCTTC 1 cut(s) 395
EciI GGCGGA 1 cut(s) 1039
Eco130I CCWWGG 2 cut(s) 748, 964
Eco24I GRGCYC 1 cut(s) 979
Eco31I GGTCTC 1 cut(s) 377
Eco32I GATATC 1 cut(s) 927
Eco47I GGWCC 2 cut(s) 757, 957
Eco57I CTGAAG 1 cut(s) 662
EcoO109I RGGNCCY 2 cut(s) 957, 976
EcoRII CCWGG 1 cut(s) 302
EcoRV GATATC 1 cut(s) 927
EcoT14I CCWWGG 2 cut(s) 748, 964
EcoT22I ATGCAT 1 cut(s) 945
EcoT38I GRGCYC 1 cut(s) 979
ErhI CCWWGG 2 cut(s) 748, 964
FaeI CATG 3 cut(s) 365, 864, 968
FalI AAGNNNNNCTT 4 cut(s) 804, 836, 807, 839
FaqI GGGAC 3 cut(s) 743, 822, 943
FatI CATG 3 cut(s) 361, 860, 964
FauI CCCGC 2 cut(s) 202, 1065
Fnu4HI GCNGC 2 cut(s) 259, 913
FokI GGATG 7 cut(s) 29, 330, 635, 711, 952, 1058, 1072
FriOI GRGCYC 1 cut(s) 979
Fsp4HI GCNGC 2 cut(s) 259, 913
FspBI CTAG 7 cut(s) 206, 827, 1019, 1031, 1038, 1061, 1105
GluI GCNGC 2 cut(s) 259, 913
GsaI CCCAGC 1 cut(s) 543
GsuI CTGGAG 2 cut(s) 164, 286
HaeIII GGCC 5 cut(s) 5, 69, 628, 977, 1084
HapII CCGG 5 cut(s) 27, 194, 560, 693, 882
HgaI GACGC 1 cut(s) 109
Hin1II CATG 3 cut(s) 365, 864, 968
HindIII AAGCTT 1 cut(s) 576
HinfI GANTC 2 cut(s) 137, 777
HpaII CCGG 5 cut(s) 27, 194, 560, 693, 882
HphI GGTGA 2 cut(s) 248, 409
Hpy166II GTNNAC 1 cut(s) 283
Hpy188I TCNGA 1 cut(s) 904
Hpy188III TCNNGA 5 cut(s) 143, 158, 185, 734, 892
Hpy8I GTNNAC 1 cut(s) 283
HpyAV CCTTC 3 cut(s) 373, 830, 842
HpyCH4III ACNGT 6 cut(s) 329, 342, 397, 418, 607, 613
HpyCH4IV ACGT 1 cut(s) 108
HpyCH4V TGCA 6 cut(s) 365, 485, 587, 943, 1003, 1043
HpyF10VI GCNNNNNNNGC 3 cut(s) 584, 1049, 1090
HpySE526I ACGT 1 cut(s) 108
Hsp92II CATG 3 cut(s) 365, 864, 968
KflI GGGWCCC 1 cut(s) 957
KspI CCGCGG 1 cut(s) 913
Kzo9I GATC 2 cut(s) 181, 187
LmnI GCTCC 6 cut(s) 76, 145, 463, 694, 1012, 1052
LweI GCATC 2 cut(s) 339, 930
MaeI CTAG 7 cut(s) 206, 827, 1019, 1031, 1038, 1061, 1105
MaeII ACGT 1 cut(s) 108
MaeIII GTNAC 2 cut(s) 607, 778
MalI GATC 2 cut(s) 183, 189
MbiI CCGCTC 1 cut(s) 689
MboI GATC 2 cut(s) 181, 187
MboII GAAGA 7 cut(s) 212, 412, 424, 655, 790, 815, 823
MflI RGATCY 1 cut(s) 181
MhlI GDGCHC 5 cut(s) 60, 246, 899, 979, 991
MlsI TGGCCA 2 cut(s) 5, 1084
MluCI AATT 2 cut(s) 468, 570
MluNI TGGCCA 2 cut(s) 5, 1084
MlyI GAGTC 1 cut(s) 786
MmeI TCCRAC 3 cut(s) 324, 595, 626
Mox20I TGGCCA 2 cut(s) 5, 1084
Mph1103I ATGCAT 1 cut(s) 945
MroXI GAANNNNTTC 2 cut(s) 653, 819
MscI TGGCCA 2 cut(s) 5, 1084
MseI TTAA 2 cut(s) 174, 333
Msp20I TGGCCA 2 cut(s) 5, 1084
MspA1I CMGCKG 2 cut(s) 912, 1080
MspI CCGG 5 cut(s) 27, 194, 560, 693, 882
MspR9I CCNGG 5 cut(s) 28, 194, 304, 693, 882
MvaI CCWGG 1 cut(s) 304
MvnI CGCG 1 cut(s) 912
MwoI GCNNNNNNNGC 3 cut(s) 584, 1049, 1090
NciI CCSGG 4 cut(s) 28, 194, 693, 882
NcoI CCATGG 1 cut(s) 964
NdeII GATC 2 cut(s) 181, 187
NheI GCTAGC 1 cut(s) 1060
NlaIII CATG 3 cut(s) 365, 864, 968
NlaIV GGNNCC 6 cut(s) 759, 958, 959, 977, 978, 1048
NmeAIII GCCGAG 1 cut(s) 533
NmuCI GTSAC 1 cut(s) 778
NsiI ATGCAT 1 cut(s) 945
NspV TTCGAA 1 cut(s) 527
PdmI GAANNNNTTC 2 cut(s) 653, 819
PfeI GAWTC 1 cut(s) 137
PflMI CCANNNNNTGG 1 cut(s) 754
PfoI TCCNGGA 2 cut(s) 302, 691
PkrI GCNGC 2 cut(s) 260, 914
PleI GAGTC 1 cut(s) 785
PpsI GAGTC 1 cut(s) 785
PpuMI RGGWCCY 1 cut(s) 957
PsiI TTATAA 1 cut(s) 767
Psp5II RGGWCCY 1 cut(s) 957
Psp6I CCWGG 1 cut(s) 302
PspFI CCCAGC 1 cut(s) 539
PspGI CCWGG 1 cut(s) 302
PspN4I GGNNCC 6 cut(s) 759, 958, 959, 977, 978, 1048
PspOMI GGGCCC 1 cut(s) 975
PspPI GGNCC 5 cut(s) 626, 757, 957, 975, 976
PspPPI RGGWCCY 1 cut(s) 957
PsrI GAACNNNNNNTAC 2 cut(s) 83, 115
PstNI CAGNNNCTG 1 cut(s) 593
PsuI RGATCY 1 cut(s) 181
RsaI GTAC 5 cut(s) 284, 293, 299, 591, 1023
RsaNI GTAC 5 cut(s) 283, 292, 298, 590, 1022
SacII CCGCGG 1 cut(s) 913
SaqAI TTAA 2 cut(s) 174, 333
SatI GCNGC 2 cut(s) 259, 913
Sau3AI GATC 2 cut(s) 181, 187
Sau96I GGNCC 5 cut(s) 626, 757, 957, 975, 976
ScaI AGTACT 1 cut(s) 299
SchI GAGTC 1 cut(s) 786
ScrFI CCNGG 5 cut(s) 28, 194, 304, 693, 882
SduI GDGCHC 5 cut(s) 60, 246, 899, 979, 991
SfaNI GCATC 2 cut(s) 339, 930
SfcI CTRYAG 2 cut(s) 227, 491
Sfr303I CCGCGG 1 cut(s) 913
SfuI TTCGAA 1 cut(s) 527
SgrBI CCGCGG 1 cut(s) 913
SinI GGWCC 2 cut(s) 757, 957
SmlI CTYRAG 2 cut(s) 71, 892
SmoI CTYRAG 2 cut(s) 71, 892
SpeI ACTAGT 1 cut(s) 1037
Sse9I AATT 2 cut(s) 468, 570
SspMI CTAG 7 cut(s) 206, 827, 1019, 1031, 1038, 1061, 1105
StyD4I CCNGG 5 cut(s) 26, 192, 302, 691, 880
StyI CCWWGG 2 cut(s) 748, 964
TaaI ACNGT 6 cut(s) 329, 342, 397, 418, 607, 613
TaiI ACGT 1 cut(s) 111
TaqI TCGA 4 cut(s) 135, 434, 527, 929
TasI AATT 2 cut(s) 468, 570
TatI WGTACW 3 cut(s) 282, 291, 297
TauI GCSGC 2 cut(s) 261, 915
TfiI GAWTC 1 cut(s) 137
Tru1I TTAA 2 cut(s) 174, 333
Tru9I TTAA 2 cut(s) 174, 333
TscAI CASTG 3 cut(s) 18, 487, 1005
TseFI GTSAC 1 cut(s) 778
Tsp45I GTSAC 1 cut(s) 778
TspDTI ATGAA 2 cut(s) 350, 662
TspRI CASTG 3 cut(s) 18, 487, 1005
Van91I CCANNNNNTGG 1 cut(s) 754
VpaK11BI GGWCC 2 cut(s) 757, 957
XmnI GAANNNNTTC 2 cut(s) 653, 819
XspI CTAG 7 cut(s) 206, 827, 1019, 1031, 1038, 1061, 1105
ZrmI AGTACT 1 cut(s) 299
Zsp2I ATGCAT 1 cut(s) 945
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.