FvH4_1g15500

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000039
Physical Location & Seq
Reverse (-)
8792521 .. 8798767
6247 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g15500.t2

Sequence Viewer

Length: 3648 bp
ATGGTTATAGTAGGGGAATTTGTAGGAGGGGCTGCTCTTGGCGCAGCATTTGGCATTCTCTTTGATGTGGTTAAGGAGGCTCTGGAGAAATCTGCAAAGTTTAAACCCCTACTCCAGACCATTAAGTCCAGTCTCGATTCTTTACGACCGGTGATCCAACAGATAGAAATGCACAATTCTGAGTTGAATCTCCCAACCCAGGAAATTGAATCATGTCTGAAGCAGATGGAGGAAGGCGTTGAGCTCGTCCGCAAGCTATCCAAAGTTTCCAAGTGGAACTGCAAGAAGCCTCGTTACACTGATCAACTTGTTAAGTTGGATGGATCCCTTAAGAGAATGATAGATATACTGAAGGTGCAGGAAGCAAGGGATGTGAAGGAAACATTGGTGCTGGTGCGGAGTATAGAGACTGTGGTTAAGCGAATTGAAGGAAATGGTTTGGTACAAAGTCAATTTGAGATCAATGGTTGTTGTCCAGTGCTTGACCATGAACCTCCTCCGACGATTATAGTTGGAGTGGATGCTCCATTGAAGGAACTAAAGAAGAATTTTCTCAAGGATGGGGTGTCAATGCTTGTACTGACCGGTCCCGGAGGATGTGGGAAAACCACATTGGCAAAAGCTTTCTGTCAAGATCAAGAAGTTAAAGATATATTCAAGAGAAATATCTTCTTTGTTACTGTCTCTAAAACGTCCAACTTGAACCATATTGTTCGAGAACTATATCAACTTAAGGGCTTTCAGGTGCCTTTTTTCCATACCGAAGTAACTGCAGTTAGCTGGCTGGAAAGATTTCTGAGGGAAACAGTTCAACATCCGCTATTGTTGGTCCTAGATGGCGTTTGGTCTGGATCAGAATCCTTTCTTCACAAGTTCGCAATCAAAATGTCAAATCACAAGATTTTGGTGACATCAAGATTTGCATTTCCAAGATTTGGTTCTCCGTACTACTTAGAATCACTGAAAGATGAAGATGCAATGACTCTTTTTCGTCATTCTGCCTCTTTGGGAGACAGGAGCTCTAATATTCCAGACCATATTTCAAGAAAGATAGTCGAGCGCTTAAAGGGATTTCCCCCAGCCATTAAAATGGTAGGAAGGTCACTTTGCGGGCAGCCTATTGAGATTTGGAAAAATAGATTGACGCAATGGTCTAAAGGTTCTTCTATTCTTGATTCGGAGAGTGATTTGCTTGACTACCTCCAGACCAACTTAGATTTCTTGGACAAAGAAGAAATTACTATTAAGGAATGTTTCATAGACCTTGGTTCATTTCCTGAAGACCAGAGAATCCCTGTTGCCGCCCTCATTGATATATGGACCGAGTTATACAAGCTAGACGAAGACAGCATGTCCATTCAGATATTATATGAGCTTGCCTCCCAGGGTCTGGCAAATCTTGTAAGCACAAGACAGGATAACTGGGAGGTGGATCAATACTTCAGCGAACACTTTGTCACCCAACACTATATGCTCAGAGAGCTAGCAATCCATCAGACTAGACAGGAACCAATAGCACTGAGAAAAAGATTGATTATAGACATATGCGGAAACAATCTTCCCACATGGTGGACAGAACAGAAGTTTCAACCTGTTAGAGCGCGCTTATTATCTATCTCAACTGATGGAGTGTTCTCAACAAAATGGCACAACATGCAACTACCAGAAGGTGAGGTTCTAGTGCTCAACTTTCAGACAAAGAACTATGCCTTACCCGAATTTGTGGAGAAAATGGATAAACTGAAGGTTCTAATAGTCACAAATTATGGATTCTTACCGGCTGAGTTAAGCAATTTTCAACTCTTGGGGTCTTTATCAAATCTAACGAGAATCAGATTAGAGCGCATTTCAATTCCTTCTCTAATCAATGACTCTGTACAATTGAAGAGTCTGCAGAAGATTTCCTTATATATGTGTAACATAGGCCAAGCTTTTAGCAATCGCTCCTTTCAAATTTCATATGCATTTCCAAATCTAGTGGAAATAAACATAGATTACTGCCATGATTTGTTGGCTTTACCTTACAACCTTTGTGATCTTATTCATCTAAAGAAGTTCAGTATCACAAACTGTCATAAGTTATATGCCTTGCCTGAAGAGATTGGAAAGCTGGTCAACCTACAAGCTCTGAGGCTAAGGTCTTGTACACACTTGTTAGAGTTGCCAAATTCGATCAGGAGCCTCAAAATGCTATACTTTCTGGACATCTCTGATTGCTGCAGTATTAAGGAATTGCCTGAAGACATTGGAGAGTTATGCAGTTTGAAAAAGCTCCATATGAGGCAGTGTTCAAAATTGCAGGAGTTGCCCCCATCAGTTTTATGGCTCAAGTCGTTAAAGGAAGTGGTATGTGATGAACATGCAGAAAAATTATGGGAACCTTTCTTACCTTATCTCAGAAAGATGCACGTAAAGGTGGCCAAACAGAATTGGCACCCCTACTCAAATTGGAATAATCTTTTACTGACAAGGATGGAAAAGACAGAGATAGTTGACAGCATGGTTAAATCGCAGCTAAACACAGTTCAGGCTGAGTTGCAACAAGCAGAATTTAAGGCTGAGAAAAAGGTGGCCAGAGATGATTGGTATCTCACCCAGAGTCAGGCTAATGTTGTAGTCACAAGGGTGGAGAAGATAGAGGTGATGGATAGGCCAGTAAAATCGCAGATCGAGACTATGAAGACAGAGTTACAAGCAGAATTTAAGGCCGAGATAGAAGCACTCAGAGACACGTTTACAAAAAAATTTGATGTCATTACGGATTTACTTATCCACCTCATACAAGGAAAGAATGAGAAGGAATGGGAAGGCAAGGACATTCAAGAACGAAAAACAAGTGTTTTCGGAGACAGTGAGAGTGAGACTGCCAAATCAAGACTCTGTATGGATAGAAACTCAAATAAGGTAATACACCAACTTCAAAAGGGCTATCGGCTTAACCCTCTCCTGCCTGAGGAACAGATAGCCAGGCGGTTTAGTGCATGGATCAGTAATCCAAACACCAGACGGTGGAACTTGGAAATCTTTGATGCACCTAAAGAGTGGTTTATAGACTTAATGACCTCGGGCACATGGTTAACTGACTCGCATGTAGACCTGTTCTTGTATTCTGTTCGCAAGAGAGCACATCTTCAGTCCCAATCTTCCTCTCAGTGTTGCACCATCCTGGATACTGTGTTTTGGAGTTGGATGAATGGGAGATGGGAGGATTTCCAGAAGAATCCCAAGTACTATAAGTGGGATTCAGACCTTAGGGACTATCCACTTGGCAAGTCGCCTAAATATGCTCGAAGATGGAGTGAAGTTGATCATTTGTACATTCCCATCAACATCAACAACCAGCATTGGGTAGCTTTATGCGCCGACATAACACGAAGAAAGTTGACTGTATACAATTCTATGCATTCTGCAGCTCAAGATGGGTTCATTTGTGACATACTGAAGCCAATGGCGACGATGTTGCCAACGTTACTTGTACAGTCGGGCTTTTACGAACATAGGCCTGAGTTGTCCCCTCTGACTACTCCGTTTAAGGTGGTACATTTAGCAGACAACATCCCACAGCAGATTGTCAGTGGCGACTGTGGGGTGTTCATGCTCAAATACATAGAGAACTTGAGCTCCGGACTACCATTGAGTTTTGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
NB-ARC RPW8

Protein Analysis

1216

Amino Acids

140.05

Weight (kDa)

7.32

Isoelectric Point (pI)

52.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RPW8 PF05659 6 - 139 2.5e-31 Arabidopsis broad-spectrum mildew resistance protein RPW8
NB-ARC PF00931 176 - 332 5.8e-13 NB-ARC domain
AAA_22 PF13401 190 - 280 4e-06 AAA domain
LRR_14 PF23598 676 - 739 2e-08 Leucine-rich repeat region
LRR_14 PF23598 734 - 787 8.5e-06 Leucine-rich repeat region
Peptidase_C48 PF02902 1025 - 1189 4.5e-20 Ulp1 protease family, C-terminal catalytic domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 124, 1150
AccB1I GGYRCC 2 cut(s) 745, 2433
AccB7I CCANNNNNTGG 4 cut(s) 935, 1390, 1569, 3009
AccI GTMKAC 2 cut(s) 3093, 3390
AccII CGCG 1 cut(s) 1603
AccIII TCCGGA 1 cut(s) 3623
AciI CCGC 7 cut(s) 250, 397, 818, 1110, 1302, 1548, 2971
AclI AACGTT 1 cut(s) 3467
AclWI GGATC 6 cut(s) 148, 318, 331, 859, 1440, 2993
AcoI YGGCCR 2 cut(s) 2418, 2571
AcsI RAATTY 8 cut(s) 17, 547, 1718, 1953, 2167, 2549, 2699, 2744
AcuI CTGAAG 9 cut(s) 239, 371, 1299, 1426, 1763, 2115, 2259, 3116, 3461
AdeI CACNNNGTG 1 cut(s) 1569
AfaI GTAC 9 cut(s) 444, 579, 947, 1878, 2146, 3230, 3317, 3477, 3540
AfeI AGCGCT 1 cut(s) 1061
AfiI CCNNNNNNNGG 8 cut(s) 199, 935, 1390, 1569, 2602, 2953, 3009, 3346
AflII CTTAAG 2 cut(s) 329, 731
AflIII ACRYGT 1 cut(s) 2730
AgeI ACCGGT 2 cut(s) 148, 584
AhdI GACNNNNNGTC 1 cut(s) 1351
AjnI CCWGG 4 cut(s) 198, 1383, 2966, 3165
AjuI GAANNNNNNNTTGG 8 cut(s) 368, 400, 596, 628, 922, 954, 1202, 1234
AleI CACNNNNGTG 1 cut(s) 2624
AloI GAACNNNNNNTCC 2 cut(s) 3605, 3637
Alw21I GWGCWC 5 cut(s) 246, 1022, 1686, 3127, 3623
Alw26I GTCTC 8 cut(s) 137, 401, 688, 1005, 2666, 2721, 2841, 2855
AlwI GGATC 6 cut(s) 148, 318, 331, 859, 1440, 2993
AlwNI CAGNNNCTG 1 cut(s) 1390
Ama87I CYCGRG 1 cut(s) 3064
Aor13HI TCCGGA 1 cut(s) 3623
Aor51HI AGCGCT 1 cut(s) 1061
AoxI GGCC 6 cut(s) 1924, 2418, 2571, 2651, 2706, 3500
ApeKI GCWGC 6 cut(s) 32, 44, 1114, 2217, 2512, 3410
ApoI RAATTY 8 cut(s) 17, 547, 1718, 1953, 2167, 2549, 2699, 2744
ArsI GACNNNNNNTTYG 2 cut(s) 1440, 1472
AsiGI ACCGGT 2 cut(s) 148, 584
Asp700I GAANNNNTTC 3 cut(s) 792, 807, 861
AspLEI GCGC 6 cut(s) 44, 1062, 1603, 1605, 1845, 3362
AspS9I GGNCC 3 cut(s) 587, 829, 1320
AsuC2I CCSGG 1 cut(s) 591
AsuHPI GGTGA 6 cut(s) 163, 919, 1450, 1682, 2584, 2653
AsuNHI GCTAGC 1 cut(s) 1483
AvaI CYCGRG 1 cut(s) 3064
AvaII GGWCC 3 cut(s) 587, 829, 1320
AxyI CCTNAGG 2 cut(s) 2952, 3251
BaeGI GKGCMC 1 cut(s) 3071
BalI TGGCCA 2 cut(s) 2420, 2573
BamHI GGATCC 1 cut(s) 323
BanI GGYRCC 2 cut(s) 745, 2433
BanII GRGCYC 3 cut(s) 246, 1022, 3623
BarI GAAGNNNNNNTAC 2 cut(s) 278, 310
BbsI GAAGAC 4 cut(s) 1287, 1350, 2247, 2687
Bbv12I GWGCWC 5 cut(s) 246, 1022, 1686, 3127, 3623
BbvI GCAGC 6 cut(s) 19, 56, 1126, 2204, 2524, 3422
BcgI CGANNNNNNTGC 4 cut(s) 752, 786, 3442, 3476
BciT130I CCWGG 4 cut(s) 200, 1385, 2968, 3167
BciVI GTATCC 1 cut(s) 3163
BclI TGATCA 2 cut(s) 301, 3307
BcnI CCSGG 1 cut(s) 591
BcoDI GTCTC 8 cut(s) 137, 401, 688, 1005, 2666, 2721, 2841, 2855
BfaI CTAG 6 cut(s) 833, 1337, 1484, 1500, 1679, 1976
BfmI CTRYAG 4 cut(s) 771, 1892, 2218, 3408
BfoI RGCGCY 1 cut(s) 1063
BfrI CTTAAG 2 cut(s) 329, 731
BfuI GTATCC 1 cut(s) 3163
BisI GCNGC 7 cut(s) 33, 45, 1115, 1302, 2218, 2513, 3411
BlsI GCNGC 7 cut(s) 34, 46, 1116, 1303, 2219, 2514, 3412
BmcAI AGTACT 1 cut(s) 3230
Bme1390I CCNGG 5 cut(s) 200, 591, 1385, 2968, 3167
Bme18I GGWCC 3 cut(s) 587, 829, 1320
BmeRI GACNNNNNGTC 1 cut(s) 1351
BmeT110I CYCGRG 1 cut(s) 3064
BmgT120I GGNCC 3 cut(s) 587, 829, 1320
BmiI GGNNCC 7 cut(s) 325, 589, 747, 1509, 2180, 2379, 2435
BmrFI CCNGG 5 cut(s) 200, 591, 1385, 2968, 3167
BmrI ACTGGG 1 cut(s) 1432
BmsI GCATC 4 cut(s) 511, 964, 2394, 3019
BmtI GCTAGC 1 cut(s) 1487
BmuI ACTGGG 1 cut(s) 1432
BpiI GAAGAC 4 cut(s) 1287, 1350, 2247, 2687
BplI GAGNNNNNCTC 2 cut(s) 1364, 1396
BpmI CTGGAG 3 cut(s) 98, 104, 1187
Bpu10I CCTNAGC 1 cut(s) 2135
BpuEI CTTGAG 4 cut(s) 539, 2312, 3399, 3637
BpuMI CCSGG 1 cut(s) 591
BsaAI YACGTR 1 cut(s) 2410
BsaBI GATNNNNATC 2 cut(s) 856, 2586
BsaJI CCNNGG 5 cut(s) 198, 1264, 1383, 1384, 3063
BsaWI WCCGGW 3 cut(s) 148, 584, 3623
BsaXI ACNNNNNCTCC 4 cut(s) 96, 126, 3605, 3635
Bsc4I CCNNNNNNNGG 8 cut(s) 199, 935, 1390, 1569, 2602, 2953, 3009, 3346
Bse118I RCCGGY 3 cut(s) 148, 584, 1777
Bse1I ACTGG 4 cut(s) 129, 476, 1427, 2654
Bse21I CCTNAGG 2 cut(s) 2952, 3251
Bse3DI GCAATG 2 cut(s) 984, 1154
Bse8I GATNNNNATC 2 cut(s) 856, 2586
BseAI TCCGGA 1 cut(s) 3623
BseBI CCWGG 4 cut(s) 200, 1385, 2968, 3167
BseDI CCNNGG 5 cut(s) 198, 1264, 1383, 1384, 3063
BseJI GATNNNNATC 2 cut(s) 856, 2586
BseLI CCNNNNNNNGG 8 cut(s) 199, 935, 1390, 1569, 2602, 2953, 3009, 3346
BseMI GCAATG 2 cut(s) 984, 1154
BseNI ACTGG 4 cut(s) 129, 476, 1427, 2654
BsePI GCGCGC 1 cut(s) 1601
BseRI GAGGAG 1 cut(s) 486
BseSI GKGCMC 1 cut(s) 3071
BseXI GCAGC 6 cut(s) 19, 56, 1126, 2204, 2524, 3422
BseYI CCCAGC 1 cut(s) 1078
BsgI GTGCAG 1 cut(s) 377
Bsh1236I CGCG 1 cut(s) 1603
Bsh1285I CGRYCG 1 cut(s) 149
BshFI GGCC 6 cut(s) 1926, 2420, 2573, 2653, 2708, 3502
BshNI GGYRCC 2 cut(s) 745, 2433
BshTI ACCGGT 2 cut(s) 148, 584
BsiEI CGRYCG 1 cut(s) 149
BsiHKAI GWGCWC 5 cut(s) 246, 1022, 1686, 3127, 3623
BsiHKCI CYCGRG 1 cut(s) 3064
BsiSI CCGG 5 cut(s) 149, 585, 591, 1778, 3624
BslFI GGGAC 4 cut(s) 573, 3121, 3269, 3496
BslI CCNNNNNNNGG 8 cut(s) 199, 935, 1390, 1569, 2602, 2953, 3009, 3346
BsmAI GTCTC 8 cut(s) 137, 401, 688, 1005, 2666, 2721, 2841, 2855
BsmFI GGGAC 4 cut(s) 573, 3121, 3269, 3496
BsmI GAATGC 2 cut(s) 54, 3403
BsnI GGCC 6 cut(s) 1926, 2420, 2573, 2653, 2708, 3502
BsoBI CYCGRG 1 cut(s) 3064
Bsp1286I GDGCHC 6 cut(s) 246, 1022, 1686, 3071, 3127, 3623
Bsp13I TCCGGA 1 cut(s) 3623
Bsp1407I TGTACA 4 cut(s) 1876, 2144, 3315, 3475
BspACI CCGC 7 cut(s) 250, 397, 818, 1110, 1302, 1548, 2971
BspANI GGCC 6 cut(s) 1926, 2420, 2573, 2653, 2708, 3502
BspEI TCCGGA 1 cut(s) 3623
BspFNI CGCG 1 cut(s) 1603
BspLI GGNNCC 7 cut(s) 325, 589, 747, 1509, 2180, 2379, 2435
BspMAI CTGCAG 4 cut(s) 775, 1896, 2222, 3412
BspOI GCTAGC 1 cut(s) 1487
BspPI GGATC 6 cut(s) 148, 318, 331, 859, 1440, 2993
BspT107I GGYRCC 2 cut(s) 745, 2433
BspTI CTTAAG 2 cut(s) 329, 731
BsrDI GCAATG 2 cut(s) 984, 1154
BsrFI RCCGGY 3 cut(s) 148, 584, 1777
BsrGI TGTACA 4 cut(s) 1876, 2144, 3315, 3475
BsrI ACTGG 4 cut(s) 129, 476, 1427, 2654
BssAI RCCGGY 3 cut(s) 148, 584, 1777
BssECI CCNNGG 5 cut(s) 198, 1264, 1383, 1384, 3063
BssHII GCGCGC 1 cut(s) 1601
BssNAI GTATAC 1 cut(s) 3391
BssT1I CCWWGG 1 cut(s) 1264
Bst1107I GTATAC 1 cut(s) 3391
Bst2UI CCWGG 4 cut(s) 200, 1385, 2968, 3167
Bst6I CTCTTC 2 cut(s) 1880, 2091
BstAFI CTTAAG 2 cut(s) 329, 731
BstAPI GCANNNNNTGC 2 cut(s) 1654, 2305
BstAUI TGTACA 4 cut(s) 1876, 2144, 3315, 3475
BstBAI YACGTR 1 cut(s) 2410
BstC8I GCNNGC 6 cut(s) 254, 782, 1112, 1377, 1485, 1603
BstENI CCTNNNNNAGG 1 cut(s) 2951
BstFNI CGCG 1 cut(s) 1603
BstH2I RGCGCY 1 cut(s) 1063
BstHHI GCGC 6 cut(s) 44, 1062, 1603, 1605, 1845, 3362
BstMAI GTCTC 8 cut(s) 137, 401, 688, 1005, 2666, 2721, 2841, 2855
BstMCI CGRYCG 1 cut(s) 149
BstMWI GCNNNNNNNGC 5 cut(s) 41, 1480, 1654, 2305, 3359
BstNI CCWGG 4 cut(s) 200, 1385, 2968, 3167
BstNSI RCATGY 4 cut(s) 1354, 1657, 2363, 3092
BstSCI CCNGG 5 cut(s) 198, 589, 1383, 2966, 3165
BstSFI CTRYAG 4 cut(s) 771, 1892, 2218, 3408
BstSLI GKGCMC 1 cut(s) 3071
BstUI CGCG 1 cut(s) 1603
BstV1I GCAGC 6 cut(s) 19, 56, 1126, 2204, 2524, 3422
BstV2I GAAGAC 4 cut(s) 1287, 1350, 2247, 2687
BstX2I RGATCY 1 cut(s) 323
BstXI CCANNNNNNTGG 1 cut(s) 1090
BstYI RGATCY 1 cut(s) 323
BstZ17I GTATAC 1 cut(s) 3391
Bsu36I CCTNAGG 2 cut(s) 2952, 3251
BsuI GTATCC 1 cut(s) 3163
BsuRI GGCC 6 cut(s) 1926, 2420, 2573, 2653, 2708, 3502
BtsI GCAGTG 1 cut(s) 2291
BtsIMutI CAGTG 8 cut(s) 297, 483, 959, 1517, 2291, 2857, 3158, 3580
Cac8I GCNNGC 6 cut(s) 254, 782, 1112, 1377, 1485, 1603
CaiI CAGNNNCTG 1 cut(s) 1390
CfoI GCGC 6 cut(s) 44, 1062, 1603, 1605, 1845, 3362
Cfr10I RCCGGY 3 cut(s) 148, 584, 1777
Cfr13I GGNCC 3 cut(s) 587, 829, 1320
CseI GACGC 1 cut(s) 1153
Csp6I GTAC 9 cut(s) 443, 578, 946, 1877, 2145, 3229, 3316, 3476, 3539
CspAI ACCGGT 2 cut(s) 148, 584
CspCI CAANNNNNGTGG 2 cut(s) 1959, 1994
CviQI GTAC 9 cut(s) 443, 578, 946, 1877, 2145, 3229, 3316, 3476, 3539
DraI TTTAAA 1 cut(s) 103
DraIII CACNNNGTG 1 cut(s) 1569
DrdI GACNNNNNNGTC 2 cut(s) 124, 1150
DriI GACNNNNNGTC 1 cut(s) 1351
DseDI GACNNNNNNGTC 2 cut(s) 124, 1150
EaeI YGGCCR 2 cut(s) 2418, 2571
Eam1104I CTCTTC 2 cut(s) 1880, 2091
Eam1105I GACNNNNNGTC 1 cut(s) 1351
EarI CTCTTC 2 cut(s) 1880, 2091
Ecl136II GAGCTC 3 cut(s) 244, 1020, 3621
Eco130I CCWWGG 1 cut(s) 1264
Eco147I AGGCCT 1 cut(s) 3502
Eco24I GRGCYC 3 cut(s) 246, 1022, 3623
Eco47I GGWCC 3 cut(s) 587, 829, 1320
Eco47III AGCGCT 1 cut(s) 1061
Eco53kI GAGCTC 3 cut(s) 244, 1020, 3621
Eco57I CTGAAG 9 cut(s) 239, 371, 1299, 1426, 1763, 2115, 2259, 3116, 3461
Eco81I CCTNAGG 2 cut(s) 2952, 3251
Eco88I CYCGRG 1 cut(s) 3064
EcoICRI GAGCTC 3 cut(s) 244, 1020, 3621
EcoNI CCTNNNNNAGG 1 cut(s) 2951
EcoRII CCWGG 4 cut(s) 198, 1383, 2966, 3165
EcoT14I CCWWGG 1 cut(s) 1264
EcoT22I ATGCAT 2 cut(s) 1966, 3405
EcoT38I GRGCYC 3 cut(s) 246, 1022, 3623
ErhI CCWWGG 1 cut(s) 1264
FalI AAGNNNNNCTT 2 cut(s) 1889, 1921
FaqI GGGAC 4 cut(s) 573, 3121, 3269, 3496
FauI CCCGC 1 cut(s) 1103
FauNDI CATATG 3 cut(s) 1544, 1960, 2277
FbaI TGATCA 2 cut(s) 301, 3307
FblI GTMKAC 2 cut(s) 3093, 3390
Fnu4HI GCNGC 7 cut(s) 33, 45, 1115, 1302, 2218, 2513, 3411
FriOI GRGCYC 3 cut(s) 246, 1022, 3623
Fsp4HI GCNGC 7 cut(s) 33, 45, 1115, 1302, 2218, 2513, 3411
FspBI CTAG 6 cut(s) 833, 1337, 1484, 1500, 1679, 1976
GlaI GCGC 6 cut(s) 43, 1061, 1602, 1604, 1844, 3361
GluI GCNGC 7 cut(s) 33, 45, 1115, 1302, 2218, 2513, 3411
GsaI CCCAGC 1 cut(s) 1082
GsuI CTGGAG 3 cut(s) 98, 104, 1187
HaeII RGCGCY 1 cut(s) 1063
HaeIII GGCC 6 cut(s) 1926, 2420, 2573, 2653, 2708, 3502
HapII CCGG 5 cut(s) 149, 585, 591, 1778, 3624
HgaI GACGC 1 cut(s) 1153
HhaI GCGC 6 cut(s) 44, 1062, 1603, 1605, 1845, 3362
Hin6I GCGC 6 cut(s) 42, 1060, 1601, 1603, 1843, 3360
HinP1I GCGC 6 cut(s) 42, 1060, 1601, 1603, 1843, 3360
HincII GTYRAC 4 cut(s) 2116, 2494, 3078, 3384
HindII GTYRAC 4 cut(s) 2116, 2494, 3078, 3384
HindIII AAGCTT 2 cut(s) 621, 1929
HpaI GTTAAC 1 cut(s) 3078
HpaII CCGG 5 cut(s) 149, 585, 591, 1778, 3624
HphI GGTGA 6 cut(s) 163, 919, 1450, 1682, 2584, 2653
Hpy166II GTNNAC 9 cut(s) 1572, 2116, 2147, 2494, 2736, 3078, 3094, 3384, 3391
Hpy8I GTNNAC 9 cut(s) 1572, 2116, 2147, 2494, 2736, 3078, 3094, 3384, 3391
Hpy99I CGWCG 2 cut(s) 505, 3457
HpyCH4IV ACGT 4 cut(s) 692, 2409, 2732, 3467
HpyF10VI GCNNNNNNNGC 5 cut(s) 41, 1480, 1654, 2305, 3359
HpySE526I ACGT 4 cut(s) 692, 2409, 2732, 3467
HspAI GCGC 6 cut(s) 42, 1060, 1601, 1603, 1843, 3360
Kpn2I TCCGGA 1 cut(s) 3623
Ksp22I TGATCA 2 cut(s) 301, 3307
KspAI GTTAAC 1 cut(s) 3078
LmnI GCTCC 6 cut(s) 529, 1017, 1949, 2178, 2277, 3626
Lsp1109I GCAGC 6 cut(s) 19, 56, 1126, 2204, 2524, 3422
LweI GCATC 4 cut(s) 511, 964, 2394, 3019
MaeI CTAG 6 cut(s) 833, 1337, 1484, 1500, 1679, 1976
MaeII ACGT 4 cut(s) 692, 2409, 2732, 3467
MfeI CAATTG 1 cut(s) 1880
MflI RGATCY 1 cut(s) 323
MhlI GDGCHC 6 cut(s) 246, 1022, 1686, 3071, 3127, 3623
MlsI TGGCCA 2 cut(s) 2420, 2573
MluNI TGGCCA 2 cut(s) 2420, 2573
MlyI GAGTC 6 cut(s) 976, 1865, 1897, 2608, 2871, 3077
MmeI TCCRAC 6 cut(s) 181, 297, 493, 524, 720, 3167
Mox20I TGGCCA 2 cut(s) 2420, 2573
Mph1103I ATGCAT 2 cut(s) 1966, 3405
MroI TCCGGA 1 cut(s) 3623
MroXI GAANNNNTTC 3 cut(s) 792, 807, 861
MscI TGGCCA 2 cut(s) 2420, 2573
MslI CAYNNNNRTG 2 cut(s) 1088, 2624
Msp20I TGGCCA 2 cut(s) 2420, 2573
MspCI CTTAAG 2 cut(s) 329, 731
MspI CCGG 5 cut(s) 149, 585, 591, 1778, 3624
MspR9I CCNGG 5 cut(s) 200, 591, 1385, 2968, 3167
MssI GTTTAAAC 1 cut(s) 103
MunI CAATTG 1 cut(s) 1880
Mva1269I GAATGC 2 cut(s) 54, 3403
MvaI CCWGG 4 cut(s) 200, 1385, 2968, 3167
MvnI CGCG 1 cut(s) 1603
MwoI GCNNNNNNNGC 5 cut(s) 41, 1480, 1654, 2305, 3359
NciI CCSGG 1 cut(s) 591
NdeI CATATG 3 cut(s) 1544, 1960, 2277
NheI GCTAGC 1 cut(s) 1483
NlaIV GGNNCC 7 cut(s) 325, 589, 747, 1509, 2180, 2379, 2435
NmeAIII GCCGAG 1 cut(s) 2734
NmuCI GTSAC 6 cut(s) 907, 1101, 1456, 1756, 2617, 3431
NsiI ATGCAT 2 cut(s) 1966, 3405
NspI RCATGY 4 cut(s) 1354, 1657, 2363, 3092
OliI CACNNNNGTG 1 cut(s) 2624
PasI CCCWGGG 1 cut(s) 1384
PauI GCGCGC 1 cut(s) 1601
PceI AGGCCT 1 cut(s) 3502
PctI GAATGC 2 cut(s) 54, 3403
PdmI GAANNNNTTC 3 cut(s) 792, 807, 861
PflMI CCANNNNNTGG 4 cut(s) 935, 1390, 1569, 3009
PfoI TCCNGGA 2 cut(s) 589, 3165
PinAI ACCGGT 2 cut(s) 148, 584
PkrI GCNGC 7 cut(s) 34, 46, 1116, 1303, 2219, 2514, 3412
PleI GAGTC 6 cut(s) 976, 1865, 1896, 2607, 2871, 3077
PmeI GTTTAAAC 1 cut(s) 103
PpsI GAGTC 6 cut(s) 976, 1865, 1896, 2607, 2871, 3077
Ppu21I YACGTR 1 cut(s) 2410
Psp124BI GAGCTC 3 cut(s) 246, 1022, 3623
Psp1406I AACGTT 1 cut(s) 3467
Psp6I CCWGG 4 cut(s) 198, 1383, 2966, 3165
PspFI CCCAGC 1 cut(s) 1078
PspGI CCWGG 4 cut(s) 198, 1383, 2966, 3165
PspN4I GGNNCC 7 cut(s) 325, 589, 747, 1509, 2180, 2379, 2435
PspPI GGNCC 3 cut(s) 587, 829, 1320
PsrI GAACNNNNNNTAC 2 cut(s) 2370, 2402
PstI CTGCAG 4 cut(s) 775, 1896, 2222, 3412
PstNI CAGNNNCTG 1 cut(s) 1390
PsuI RGATCY 1 cut(s) 323
PteI GCGCGC 1 cut(s) 1601
RsaI GTAC 9 cut(s) 444, 579, 947, 1878, 2146, 3230, 3317, 3477, 3540
RsaNI GTAC 9 cut(s) 443, 578, 946, 1877, 2145, 3229, 3316, 3476, 3539
RseI CAYNNNNRTG 2 cut(s) 1088, 2624
SacI GAGCTC 3 cut(s) 246, 1022, 3623
SatI GCNGC 7 cut(s) 33, 45, 1115, 1302, 2218, 2513, 3411
Sau96I GGNCC 3 cut(s) 587, 829, 1320
ScaI AGTACT 1 cut(s) 3230
SchI GAGTC 6 cut(s) 976, 1865, 1897, 2608, 2871, 3077
ScrFI CCNGG 5 cut(s) 200, 591, 1385, 2968, 3167
SduI GDGCHC 6 cut(s) 246, 1022, 1686, 3071, 3127, 3623
SfaNI GCATC 4 cut(s) 511, 964, 2394, 3019
SfcI CTRYAG 4 cut(s) 771, 1892, 2218, 3408
SinI GGWCC 3 cut(s) 587, 829, 1320
SmiMI CAYNNNNRTG 2 cut(s) 1088, 2624
SmlI CTYRAG 6 cut(s) 329, 554, 731, 2327, 3414, 3616
SmoI CTYRAG 6 cut(s) 329, 554, 731, 2327, 3414, 3616
SseBI AGGCCT 1 cut(s) 3502
SsiI CCGC 7 cut(s) 250, 397, 818, 1110, 1302, 1548, 2971
SspI AATATT 1 cut(s) 1027
SspMI CTAG 6 cut(s) 833, 1337, 1484, 1500, 1679, 1976
SstI GAGCTC 3 cut(s) 246, 1022, 3623
StuI AGGCCT 1 cut(s) 3502
StyD4I CCNGG 5 cut(s) 198, 589, 1383, 2966, 3165
StyI CCWWGG 1 cut(s) 1264
TaiI ACGT 4 cut(s) 695, 2412, 2735, 3470
TaqI TCGA 6 cut(s) 135, 715, 1056, 2171, 2670, 3289
TaqII GACCGA 1 cut(s) 1337
TatI WGTACW 6 cut(s) 577, 1876, 2144, 3228, 3315, 3475
TauI GCSGC 1 cut(s) 1304
TscAI CASTG 8 cut(s) 304, 483, 966, 1524, 2291, 2857, 3158, 3580
TseFI GTSAC 6 cut(s) 907, 1101, 1456, 1756, 2617, 3431
TseI GCWGC 6 cut(s) 32, 44, 1114, 2217, 2512, 3410
Tsp45I GTSAC 6 cut(s) 907, 1101, 1456, 1756, 2617, 3431
TspGWI ACGGA 3 cut(s) 933, 2774, 3516
TspRI CASTG 8 cut(s) 304, 483, 966, 1524, 2291, 2857, 3158, 3580
Van91I CCANNNNNTGG 4 cut(s) 935, 1390, 1569, 3009
Vha464I CTTAAG 2 cut(s) 329, 731
VpaK11BI GGWCC 3 cut(s) 587, 829, 1320
XagI CCTNNNNNAGG 1 cut(s) 2951
XapI RAATTY 8 cut(s) 17, 547, 1718, 1953, 2167, 2549, 2699, 2744
XceI RCATGY 4 cut(s) 1354, 1657, 2363, 3092
XcmI CCANNNNNNNNNTGG 1 cut(s) 2319
XmiI GTMKAC 2 cut(s) 3093, 3390
XmnI GAANNNNTTC 3 cut(s) 792, 807, 861
XspI CTAG 6 cut(s) 833, 1337, 1484, 1500, 1679, 1976
ZrmI AGTACT 1 cut(s) 3230
Zsp2I ATGCAT 2 cut(s) 1966, 3405
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.