RchiOBHm_Chr2g0104191

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000039
Physical Location & Seq
Forward (+)
15609040 .. 15612992
3953 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ47846

Sequence Viewer

Length: 2649 bp
ATGGTTGGTGGAGATGATGTTTTTGGTGGGGCTGCTGGAGGATTGCTGTTCAATGTTCTCTATGATGTGCTTAAAGAGCTCATCAGCAAGTCTATGATATATAGACCTCTCCTCCAAAACATTCTATCTGCGCTAGACTCATATGGACCACTGATCAAGCAGATAGAAGCAAGCAATGAGGAACTGGGTCTTCCAAAGGAGGAAGTAGAAAAGTTCAAAGCACATATGGAGAAGGGCATAGAGATAGGCCGGAAGTGCTCTAAGGTTCGCAAGTGGAACATCTACAAGAAGTACAAGTACGCCAACAAACTTCTTGGATGGGATGGTGCTCTTGTAAGACAGTTGGATGTACTGAAGGCGCAGGGAGTAAGGGATGTGAAGCAGACCATGGTTTCGGTAAAGAAGATCGAGAGGGTGGTCACTGGGATTGAAGCGAGTAGTATCTTTTTAGAGGCAGGGGTTGCGCATATTGCAACAGCCAGTAGGCATATGGAGAAGGCGCTCAGCGGAGTTGAAATGAGAAGTGGAGATATAGTGGAGGGGATGTGCCGAATTGAAGACCGAGTTGAAACAAGCTGTAGCATTGTGGAGGCAGGGGTCAAGCGGATTGAAGACCGACTTGATACACGAAATGGAGCTAAAGTTGGAGCTTGGTGTGTTGTGCCTGAACTTACACAGTTTACGGTTGGATTGGATGAGCCTTTGAAGGAATTGAAGATGAAACTTCTCAAGGAGGATGGAGTCTCGATGCTAGTGGTCACTGCTCCCGGAGGATGTGGGAAAACTACATTGGCAACAAAGTTTTGTCAAGATGAGCAAGTCAAAGATAAATTCAAGAATAATATCTTCTTTGTCACTGTGTCAAACACACCAAACCTGAGCCTTATTGTGCAAGAGCTATACCAATGCAAGGGTTCCCAGGTGCCTACTTTCCAAGATGAAATAACTGCAGTCAAGTGGCTGCAAACATTTCTGAAGGAAGAAGGACAAAACCCTTTACTATTAGTCTTGGATGATGTTTGGTCTGGATCAGAATCCCTACTAGACAAGTTTCAGTTCAAGATGCCAGATTACAAGATTTTGGTCACATCAAGATCTGAATTTCCGAGATTTGGTTCCTCATATCATTTGCAATCGTTGGATTATGACAATGCCATGAAACTTTTTCATCATTCAGCATCTTTGGGAGATAAAAGCTCACATATTCCAGAATACCTCTCGAGTCAGATAGTAAAGGGCTGTAAGGGATTTCCACTTGCAATTACGGTGGCAGGAGGATCACTTTGCGGACAAAGAATAGAGATCTGGCAACAAATACTAATTGAATGGTCCAGAGGGTCTTCTATTCTTGATTCTGAGACCAAATTGCTTCTTCGCCTCCAAAGCAGCTTAGTTGTCTCGGACTCAGATAAAGAAATGGCTATCATCAGGAAGTGTTTCTTAGACCTTGCTTCATTTCCTGAAGACCAAAGAATCCCAGTTACTGCCCTCATTGATATGTGGACAGAGTCATATGATCAGCTAGATGAAGATACTTTGTGTGTTGCATACCTCCAGAGGCTGACTAACCGAAGTCTGGCTAATCTTGTAGTCACACGGAAGGACCAGAGCCTGGGGGATGGATACTACAGCGAACATTTTGTTACCCAGCACGATCTGCTTAGAGAGTTGGCTATCTATGAGACAAAACAAGAAGACCCAGGACATAGAGAAAGACTGATTATAAACATATCTGGAGACAATTTTCCCAAGTGGTGGAGTGAAAAGAAGCATGAATCCTTGAAAGCTCGCTTATTATCCATCTCAACTGATGGAAATTTCTCATCAAAATGGCACCACATGGAACTACCATATGCTGAGGTTCTAGTCTTGAATTTTCAGACGAAGAACTACGCCTTACCCAAATTTGTGGACACTATGCGTAAATTGAAGGTACTTGTTGTCACAAATTATGGTTTCTCGCCTGCTGAACTAAGTAATATCCCACTACTGGGTTCATTATCTCATCTAAAGAGAATTAGATTGGAGCGTGTCTCAATACCATCAATGTCCAAGAACCCCATACAATTGGTGGGTCTAAAAAAGATATCTCTATTCATGTGTACCATTGGGAAAGCTTTCGGTGACGGTTCCATCCAGATTTCATACGCATTTCCAAATCTAGAGGAAATTAGCATTGACTATTGCAATGACTTGGTGGAAATGCCTGCCAACGTCTGTGATCTTAGTCATCTACGGAAGCTCAGTATCACCAACTCACATAAGCTTCTTGCCTTGCCTGAAGAAATTGGAAAACTGGAAAAGTTGGAACTGCTGAGACTAAGGTCATGTACAGACTTGGCACAGTTGCCAGGCTCGAGCAGGAACCTAAAGAAGTTGATCTTTCTTGACATTTCTTATTGCTTTAGCATCAAGGAGTTGCCTGGAGATATTGGTGAAATGAGCAGCTTAAGAAAGCTCAACATGAGAGAATGCTCAAGATTGCAAGAAGTGCCTGTATCGGTTTTGGATCTTGAGCATTTGGAGGAAGTGATATGTGATGACGAGACAAGAAATTTATGGGAACCATTCTTACCTCTCGGAAACACAAGAATAGTGGTGGAAAAAGAAAATATCAACCTAAATTGGCTCGATAAGCTTCAATCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
NB-ARC RPW8

Protein Analysis

882

Amino Acids

99.57

Weight (kDa)

6.18

Isoelectric Point (pI)

45.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RPW8 PF05659 6 - 137 3.6e-22 Arabidopsis broad-spectrum mildew resistance protein RPW8
NB-ARC PF00931 233 - 391 3.8e-16 NB-ARC domain
LRR_14 PF23598 736 - 842 2.2e-13 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1724
Acc16I TGCGCA 1 cut(s) 465
AccB1I GGYRCC 2 cut(s) 922, 1833
AccB7I CCANNNNNTGG 2 cut(s) 1612, 1755
AciI CCGC 3 cut(s) 507, 604, 1287
AclWI GGATC 3 cut(s) 1036, 1285, 2517
AcsI RAATTY 6 cut(s) 830, 1100, 1816, 1873, 1904, 2554
AcuI CTGAAG 4 cut(s) 374, 995, 1482, 2301
AfaI GTAC 6 cut(s) 293, 299, 351, 1935, 2104, 2332
AfiI CCNNNNNNNGG 7 cut(s) 910, 1112, 1576, 1612, 1755, 1990, 1991
AflII CTTAAG 1 cut(s) 2449
AjnI CCWGG 5 cut(s) 918, 1611, 1699, 2350, 2422
AjuI GAANNNNNNNTTGG 2 cut(s) 773, 805
Alw21I GWGCWC 3 cut(s) 81, 260, 331
Alw26I GTCTC 8 cut(s) 748, 1352, 1402, 1676, 1731, 2038, 2311, 2540
AlwI GGATC 3 cut(s) 1036, 1285, 2517
AlwNI CAGNNNCTG 3 cut(s) 1484, 1561, 1612
Ama87I CYCGRG 2 cut(s) 1219, 2356
AoxI GGCC 1 cut(s) 247
ApeKI GCWGC 4 cut(s) 32, 961, 1386, 2445
ApoI RAATTY 6 cut(s) 830, 1100, 1816, 1873, 1904, 2554
ArsI GACNNNNNNTTYG 2 cut(s) 376, 408
Asp700I GAANNNNTTC 2 cut(s) 1436, 2117
AspLEI GCGC 4 cut(s) 133, 361, 466, 502
AspS9I GGNCC 3 cut(s) 146, 1329, 1603
AsuC2I CCSGG 1 cut(s) 768
AsuHPI GGTGA 3 cut(s) 2135, 2242, 2447
AvaI CYCGRG 2 cut(s) 1219, 2356
AvaII GGWCC 3 cut(s) 146, 1329, 1603
BanI GGYRCC 2 cut(s) 922, 1833
BanII GRGCYC 1 cut(s) 81
BarI GAAGNNNNNNTAC 2 cut(s) 281, 313
BbsI GAAGAC 6 cut(s) 182, 564, 618, 1332, 1470, 1701
Bbv12I GWGCWC 3 cut(s) 81, 260, 331
BbvCI CCTCAGC 1 cut(s) 1857
BbvI GCAGC 4 cut(s) 19, 948, 1398, 2457
BccI CCATC 8 cut(s) 312, 317, 731, 1613, 1805, 1808, 2050, 2141
BciT130I CCWGG 5 cut(s) 920, 1613, 1701, 2352, 2424
BciVI GTATCC 1 cut(s) 1616
BclI TGATCA 2 cut(s) 153, 1516
BcnI CCSGG 1 cut(s) 768
BcoDI GTCTC 8 cut(s) 748, 1352, 1402, 1676, 1731, 2038, 2311, 2540
BfaI CTAG 6 cut(s) 134, 752, 1043, 1523, 1865, 2162
BfmI CTRYAG 3 cut(s) 577, 948, 1627
BfoI RGCGCY 1 cut(s) 503
BfrI CTTAAG 1 cut(s) 2449
BfuI GTATCC 1 cut(s) 1616
BglII AGATCT 2 cut(s) 1094, 1302
BisI GCNGC 4 cut(s) 33, 962, 1387, 2446
BlpI GCTNAGC 1 cut(s) 503
BlsI GCNGC 4 cut(s) 34, 963, 1388, 2447
Bme1390I CCNGG 6 cut(s) 768, 920, 1613, 1701, 2352, 2424
Bme18I GGWCC 3 cut(s) 146, 1329, 1603
BmeT110I CYCGRG 2 cut(s) 1219, 2356
BmgT120I GGNCC 3 cut(s) 146, 1329, 1603
BmiI GGNNCC 7 cut(s) 916, 924, 1117, 1835, 2131, 2366, 2565
BmrFI CCNGG 6 cut(s) 768, 920, 1613, 1701, 2352, 2424
BmrI ACTGGG 4 cut(s) 194, 432, 1472, 2000
BmsI GCATC 4 cut(s) 738, 1053, 1187, 2418
BmuI ACTGGG 4 cut(s) 194, 432, 1472, 2000
BoxI GACNNNNGTC 1 cut(s) 2323
BpiI GAAGAC 6 cut(s) 182, 564, 618, 1332, 1470, 1701
BplI GAGNNNNNCTC 2 cut(s) 2018, 2050
BpmI CTGGAG 4 cut(s) 57, 1538, 1755, 2445
Bpu10I CCTNAGC 2 cut(s) 878, 1857
Bpu1102I GCTNAGC 1 cut(s) 503
BpuEI CTTGAG 3 cut(s) 713, 2461, 2534
BpuMI CCSGG 1 cut(s) 768
BsaBI GATNNNNATC 1 cut(s) 1033
BsaI GGTCTC 1 cut(s) 1352
BsaJI CCNNGG 4 cut(s) 387, 918, 1612, 1699
BsaXI ACNNNNNCTCC 9 cut(s) 33, 96, 126, 519, 530, 549, 560, 627, 657
Bsc4I CCNNNNNNNGG 7 cut(s) 910, 1112, 1576, 1612, 1755, 1990, 1991
Bse1I ACTGG 6 cut(s) 189, 427, 480, 1478, 1995, 2301
Bse3DI GCAATG 2 cut(s) 181, 2194
Bse8I GATNNNNATC 1 cut(s) 1033
BseBI CCWGG 5 cut(s) 920, 1613, 1701, 2352, 2424
BseDI CCNNGG 4 cut(s) 387, 918, 1612, 1699
BseJI GATNNNNATC 1 cut(s) 1033
BseLI CCNNNNNNNGG 7 cut(s) 910, 1112, 1576, 1612, 1755, 1990, 1991
BseMI GCAATG 2 cut(s) 181, 2194
BseMII CTCAG 7 cut(s) 517, 869, 1347, 1419, 1848, 2257, 2306
BseNI ACTGG 6 cut(s) 189, 427, 480, 1478, 1995, 2301
BseRI GAGGAG 1 cut(s) 101
BseXI GCAGC 4 cut(s) 19, 948, 1398, 2457
BseYI CCCAGC 1 cut(s) 1647
BshFI GGCC 1 cut(s) 249
BshNI GGYRCC 2 cut(s) 922, 1833
BsiHKAI GWGCWC 3 cut(s) 81, 260, 331
BsiHKCI CYCGRG 2 cut(s) 1219, 2356
BsiSI CCGG 2 cut(s) 250, 768
BslI CCNNNNNNNGG 7 cut(s) 910, 1112, 1576, 1612, 1755, 1990, 1991
BsmAI GTCTC 8 cut(s) 748, 1352, 1402, 1676, 1731, 2038, 2311, 2540
BsmI GAATGC 1 cut(s) 2477
BsnI GGCC 1 cut(s) 249
Bso31I GGTCTC 1 cut(s) 1352
BsoBI CYCGRG 2 cut(s) 1219, 2356
Bsp1286I GDGCHC 3 cut(s) 81, 260, 331
Bsp1407I TGTACA 1 cut(s) 2330
Bsp1720I GCTNAGC 1 cut(s) 503
Bsp19I CCATGG 1 cut(s) 387
BspACI CCGC 3 cut(s) 507, 604, 1287
BspANI GGCC 1 cut(s) 249
BspCNI CTCAG 7 cut(s) 516, 870, 1348, 1418, 1849, 2256, 2307
BspLI GGNNCC 7 cut(s) 916, 924, 1117, 1835, 2131, 2366, 2565
BspMAI CTGCAG 1 cut(s) 952
BspPI GGATC 3 cut(s) 1036, 1285, 2517
BspT107I GGYRCC 2 cut(s) 922, 1833
BspTI CTTAAG 1 cut(s) 2449
BspTNI GGTCTC 1 cut(s) 1352
BsrDI GCAATG 2 cut(s) 181, 2194
BsrGI TGTACA 1 cut(s) 2330
BsrI ACTGG 6 cut(s) 189, 427, 480, 1478, 1995, 2301
BssECI CCNNGG 4 cut(s) 387, 918, 1612, 1699
BssT1I CCWWGG 1 cut(s) 387
Bst2UI CCWGG 5 cut(s) 920, 1613, 1701, 2352, 2424
Bst4CI ACNGT 7 cut(s) 342, 678, 685, 859, 1267, 2129, 2346
BstAFI CTTAAG 1 cut(s) 2449
BstAPI GCANNNNNTGC 3 cut(s) 461, 1657, 2491
BstAUI TGTACA 1 cut(s) 2330
BstC8I GCNNGC 4 cut(s) 172, 1789, 1965, 2208
BstDSI CCRYGG 1 cut(s) 387
BstH2I RGCGCY 1 cut(s) 503
BstHHI GCGC 4 cut(s) 133, 361, 466, 502
BstMAI GTCTC 8 cut(s) 748, 1352, 1402, 1676, 1731, 2038, 2311, 2540
BstMWI GCNNNNNNNGC 8 cut(s) 76, 255, 461, 470, 1383, 1657, 2491, 2635
BstNI CCWGG 5 cut(s) 920, 1613, 1701, 2352, 2424
BstPAI GACNNNNGTC 1 cut(s) 2323
BstSCI CCNGG 6 cut(s) 766, 918, 1611, 1699, 2350, 2422
BstSFI CTRYAG 3 cut(s) 577, 948, 1627
BstV1I GCAGC 4 cut(s) 19, 948, 1398, 2457
BstV2I GAAGAC 6 cut(s) 182, 564, 618, 1332, 1470, 1701
BstX2I RGATCY 3 cut(s) 1094, 1302, 2509
BstXI CCANNNNNNTGG 2 cut(s) 1909, 2068
BstYI RGATCY 3 cut(s) 1094, 1302, 2509
BsuI GTATCC 1 cut(s) 1616
BsuRI GGCC 1 cut(s) 249
BtgI CCRYGG 1 cut(s) 387
BtsI GCAGTG 1 cut(s) 759
BtsIMutI CAGTG 4 cut(s) 149, 420, 759, 855
Cac8I GCNNGC 4 cut(s) 172, 1789, 1965, 2208
CaiI CAGNNNCTG 3 cut(s) 1484, 1561, 1612
CfoI GCGC 4 cut(s) 133, 361, 466, 502
Cfr13I GGNCC 3 cut(s) 146, 1329, 1603
Csp6I GTAC 6 cut(s) 292, 298, 350, 1934, 2103, 2331
CspCI CAANNNNNGTGG 4 cut(s) 1248, 1283, 2577, 2612
CviAII CATG 7 cut(s) 388, 1156, 1772, 1840, 2098, 2328, 2464
CviQI GTAC 6 cut(s) 292, 298, 350, 1934, 2103, 2331
Ecl136II GAGCTC 1 cut(s) 79
Eco130I CCWWGG 1 cut(s) 387
Eco24I GRGCYC 1 cut(s) 81
Eco31I GGTCTC 1 cut(s) 1352
Eco32I GATATC 1 cut(s) 2088
Eco47I GGWCC 3 cut(s) 146, 1329, 1603
Eco53kI GAGCTC 1 cut(s) 79
Eco57I CTGAAG 4 cut(s) 374, 995, 1482, 2301
Eco88I CYCGRG 2 cut(s) 1219, 2356
EcoICRI GAGCTC 1 cut(s) 79
EcoRII CCWGG 5 cut(s) 918, 1611, 1699, 2350, 2422
EcoRV GATATC 1 cut(s) 2088
EcoT14I CCWWGG 1 cut(s) 387
EcoT38I GRGCYC 1 cut(s) 81
ErhI CCWWGG 1 cut(s) 387
FaeI CATG 7 cut(s) 391, 1159, 1775, 1843, 2101, 2331, 2467
FalI AAGNNNNNCTT 6 cut(s) 603, 635, 1424, 1456, 2366, 2398
FatI CATG 7 cut(s) 387, 1155, 1771, 1839, 2097, 2327, 2463
FauNDI CATATG 5 cut(s) 142, 225, 489, 1513, 1852
FbaI TGATCA 2 cut(s) 153, 1516
Fnu4HI GCNGC 4 cut(s) 33, 962, 1387, 2446
FriOI GRGCYC 1 cut(s) 81
Fsp4HI GCNGC 4 cut(s) 33, 962, 1387, 2446
FspBI CTAG 6 cut(s) 134, 752, 1043, 1523, 1865, 2162
FspI TGCGCA 1 cut(s) 465
GlaI GCGC 4 cut(s) 132, 360, 465, 501
GluI GCNGC 4 cut(s) 33, 962, 1387, 2446
GsaI CCCAGC 1 cut(s) 1651
GsuI CTGGAG 4 cut(s) 57, 1538, 1755, 2445
HaeII RGCGCY 1 cut(s) 503
HaeIII GGCC 1 cut(s) 249
HapII CCGG 2 cut(s) 250, 768
HhaI GCGC 4 cut(s) 133, 361, 466, 502
Hin1II CATG 7 cut(s) 391, 1159, 1775, 1843, 2101, 2331, 2467
Hin6I GCGC 4 cut(s) 131, 359, 464, 500
HinP1I GCGC 4 cut(s) 131, 359, 464, 500
HindIII AAGCTT 3 cut(s) 2115, 2264, 2636
HinfI GANTC 9 cut(s) 137, 741, 1034, 1222, 1352, 1403, 1473, 1508, 1775
HpaII CCGG 2 cut(s) 250, 768
HphI GGTGA 3 cut(s) 2135, 2242, 2447
Hpy166II GTNNAC 4 cut(s) 681, 1503, 1912, 2103
Hpy8I GTNNAC 4 cut(s) 681, 1503, 1912, 2103
HpyAV CCTTC 8 cut(s) 226, 349, 490, 700, 970, 977, 1594, 1924
HpyCH4III ACNGT 7 cut(s) 342, 678, 685, 859, 1267, 2129, 2346
HpyCH4IV ACGT 1 cut(s) 2214
HpyF10VI GCNNNNNNNGC 8 cut(s) 76, 255, 461, 470, 1383, 1657, 2491, 2635
HpySE526I ACGT 1 cut(s) 2214
Hsp92II CATG 7 cut(s) 391, 1159, 1775, 1843, 2101, 2331, 2467
HspAI GCGC 4 cut(s) 131, 359, 464, 500
Ksp22I TGATCA 2 cut(s) 153, 1516
LmnI GCTCC 4 cut(s) 635, 647, 769, 2026
Lsp1109I GCAGC 4 cut(s) 19, 948, 1398, 2457
LweI GCATC 4 cut(s) 738, 1053, 1187, 2418
MaeI CTAG 6 cut(s) 134, 752, 1043, 1523, 1865, 2162
MaeII ACGT 1 cut(s) 2214
MaeIII GTNAC 9 cut(s) 418, 757, 853, 1084, 1480, 1591, 1642, 1942, 2123
MfeI CAATTG 1 cut(s) 2066
MflI RGATCY 3 cut(s) 1094, 1302, 2509
MhlI GDGCHC 3 cut(s) 81, 260, 331
MlyI GAGTC 5 cut(s) 131, 750, 1231, 1397, 1517
MmeI TCCRAC 5 cut(s) 324, 625, 667, 1119, 2286
MroXI GAANNNNTTC 2 cut(s) 1436, 2117
MseI TTAA 2 cut(s) 72, 2450
MslI CAYNNNNRTG 2 cut(s) 1496, 1828
MspA1I CMGCKG 1 cut(s) 507
MspCI CTTAAG 1 cut(s) 2449
MspI CCGG 2 cut(s) 250, 768
MspR9I CCNGG 6 cut(s) 768, 920, 1613, 1701, 2352, 2424
MunI CAATTG 1 cut(s) 2066
Mva1269I GAATGC 1 cut(s) 2477
MvaI CCWGG 5 cut(s) 920, 1613, 1701, 2352, 2424
MwoI GCNNNNNNNGC 8 cut(s) 76, 255, 461, 470, 1383, 1657, 2491, 2635
NciI CCSGG 1 cut(s) 768
NcoI CCATGG 1 cut(s) 387
NdeI CATATG 5 cut(s) 142, 225, 489, 1513, 1852
NlaIII CATG 7 cut(s) 391, 1159, 1775, 1843, 2101, 2331, 2467
NlaIV GGNNCC 7 cut(s) 916, 924, 1117, 1835, 2131, 2366, 2565
NmuCI GTSAC 7 cut(s) 418, 757, 853, 1084, 1591, 1942, 2123
NsbI TGCGCA 1 cut(s) 465
PaeR7I CTCGAG 2 cut(s) 1219, 2356
PctI GAATGC 1 cut(s) 2477
PdmI GAANNNNTTC 2 cut(s) 1436, 2117
PfeI GAWTC 4 cut(s) 1034, 1352, 1473, 1775
PflFI GACNNNGTC 1 cut(s) 1507
PflMI CCANNNNNTGG 2 cut(s) 1612, 1755
PfoI TCCNGGA 1 cut(s) 766
PkrI GCNGC 4 cut(s) 34, 963, 1388, 2447
PleI GAGTC 5 cut(s) 131, 749, 1230, 1397, 1516
PpsI GAGTC 5 cut(s) 131, 749, 1230, 1397, 1516
PshAI GACNNNNGTC 1 cut(s) 2323
PsiI TTATAA 1 cut(s) 1724
Psp124BI GAGCTC 1 cut(s) 81
Psp6I CCWGG 5 cut(s) 918, 1611, 1699, 2350, 2422
PspFI CCCAGC 1 cut(s) 1647
PspGI CCWGG 5 cut(s) 918, 1611, 1699, 2350, 2422
PspN4I GGNNCC 7 cut(s) 916, 924, 1117, 1835, 2131, 2366, 2565
PspPI GGNCC 3 cut(s) 146, 1329, 1603
PspXI VCTCGAGB 1 cut(s) 2356
PsrI GAACNNNNNNTAC 2 cut(s) 2556, 2588
PstI CTGCAG 1 cut(s) 952
PstNI CAGNNNCTG 3 cut(s) 1484, 1561, 1612
PsuI RGATCY 3 cut(s) 1094, 1302, 2509
PsyI GACNNNGTC 1 cut(s) 1507
RsaI GTAC 6 cut(s) 293, 299, 351, 1935, 2104, 2332
RsaNI GTAC 6 cut(s) 292, 298, 350, 1934, 2103, 2331
RseI CAYNNNNRTG 2 cut(s) 1496, 1828
SacI GAGCTC 1 cut(s) 81
SaqAI TTAA 2 cut(s) 72, 2450
SatI GCNGC 4 cut(s) 33, 962, 1387, 2446
Sau96I GGNCC 3 cut(s) 146, 1329, 1603
SchI GAGTC 5 cut(s) 131, 750, 1231, 1397, 1517
ScrFI CCNGG 6 cut(s) 768, 920, 1613, 1701, 2352, 2424
SduI GDGCHC 3 cut(s) 81, 260, 331
SfaNI GCATC 4 cut(s) 738, 1053, 1187, 2418
SfcI CTRYAG 3 cut(s) 577, 948, 1627
Sfr274I CTCGAG 2 cut(s) 1219, 2356
SinI GGWCC 3 cut(s) 146, 1329, 1603
SlaI CTCGAG 2 cut(s) 1219, 2356
SmiMI CAYNNNNRTG 2 cut(s) 1496, 1828
SmlI CTYRAG 6 cut(s) 728, 1219, 2356, 2449, 2476, 2513
SmoI CTYRAG 6 cut(s) 728, 1219, 2356, 2449, 2476, 2513
SsiI CCGC 3 cut(s) 507, 604, 1287
SspMI CTAG 6 cut(s) 134, 752, 1043, 1523, 1865, 2162
SstI GAGCTC 1 cut(s) 81
StyD4I CCNGG 6 cut(s) 766, 918, 1611, 1699, 2350, 2422
StyI CCWWGG 1 cut(s) 387
TaaI ACNGT 7 cut(s) 342, 678, 685, 859, 1267, 2129, 2346
TaiI ACGT 1 cut(s) 2217
TaqI TCGA 5 cut(s) 408, 746, 1220, 2357, 2631
TaqII GACCGA 2 cut(s) 576, 630
TatI WGTACW 3 cut(s) 291, 349, 2330
TfiI GAWTC 4 cut(s) 1034, 1352, 1473, 1775
Tru1I TTAA 2 cut(s) 72, 2450
Tru9I TTAA 2 cut(s) 72, 2450
TscAI CASTG 4 cut(s) 156, 427, 766, 862
TseFI GTSAC 7 cut(s) 418, 757, 853, 1084, 1591, 1942, 2123
TseI GCWGC 4 cut(s) 32, 961, 1386, 2445
Tsp45I GTSAC 7 cut(s) 418, 757, 853, 1084, 1591, 1942, 2123
TspGWI ACGGA 2 cut(s) 1612, 2251
TspRI CASTG 4 cut(s) 156, 427, 766, 862
Tth111I GACNNNGTC 1 cut(s) 1507
Van91I CCANNNNNTGG 2 cut(s) 1612, 1755
Vha464I CTTAAG 1 cut(s) 2449
VpaK11BI GGWCC 3 cut(s) 146, 1329, 1603
XapI RAATTY 6 cut(s) 830, 1100, 1816, 1873, 1904, 2554
XbaI TCTAGA 1 cut(s) 2161
XcmI CCANNNNNNNNNTGG 2 cut(s) 487, 2068
XhoI CTCGAG 2 cut(s) 1219, 2356
XmnI GAANNNNTTC 2 cut(s) 1436, 2117
XspI CTAG 6 cut(s) 134, 752, 1043, 1523, 1865, 2162
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.