MD02G1165500.v1.1

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
OG0000039
Physical Location & Seq
Forward (+)
14178668 .. 14182408
3741 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1165500.v1.1.491

Sequence Viewer

Length: 2535 bp
ATGAAGTTTCCCAGACATGCTATTGCTAAGGTTAACGCGCTTCAACTCCGAAATTTCTATCGAGCTTCAGTAAATCAAGGAATGGGTGGAGAAGGCGGCCTTATCGGCGGGGCTGGTCTCGGAACACTATTCAATGCGCTGTATGAGGGCCTCGGGGAGCTGATTGCCAAGAATCTAGTGTTTAAGCCCCTACTCAAAAACATCAGGTTAGACTCTTTGGAGCCATTGTTGAAAGATATAGAAGAATCCAACAAGAAATTGGATCTTCCGGTTGTGGAACTGGAAAACTTAAAAGCACATTTGGAGGAGGGCATAGAGCTCCTTCGAAAGTGCAAAAAGATTCGATGGTGGATCGTCTACAAAAGGTACAAATACGCCACTAAGCTGATTCGATGGGATAAATCTCTTCAACGATTTCTGGAAATACTAAACGTTCAGGGAATAAGGGATGTGAAGGACAGCACGGTTTCGGTGAAGAATATAGAGAAGCTGGTCAGCAGAATTGAATCGAATATGGGGATACCAAAACAAACCGACAGTGAAGCTTGGTGTGCGGTACCTGAACTTCCCCCGCTAGTGGTTGGATTGGATTTTCCTCTCAAGGAATTGAAGAGGAAGCTTCTAAAGGACGAAAACGTGTCAATGGTTGTGCTGACTGCTCCCGGAGGATGTGGAAAAACCACTCTGGCTACAAAGTTTTGTCAAGACAAGGATGTCAAAGATACATTCAAGGAGAATATCTTCTTCGTCACGGTTTCAAAAAAGCCTAAATTGGAAAATATTGTTCAAGATTTATATCAACGCAAGGGTTTCCCGGCACCTACTTTCCAAAACGAAGGCAGTGTAGTGACGTGGCTGCAACATTTTCTGAGGGAAGAAGGGCAGAATCCTTTACTGATTGTCCTGGATGATGTTTGGTCTGGATCAGAATCCCTTCTGGAGAAGTTTGATCAATTCAAAACGGAAAATTTCAAGTTTTTGGTGACATCTAGGTCTGAATTTCGGGGATATGGTTCCCCTTATTATTTGCAATCATTGGATCATGACAATGCGATGAAACTTTTTCATCATTCAGCATCCCTTGGAGATAAGAGCTCTCATATTCCAAAAGATCTTCCGGAAAAGATAGTTGAGCGTTGCAAGGGATTTCCACTTGCTATTACAGTGGTGGGGAGATCACTTTGCGGGGAGCCTATTGAGATATGGCGCGAAAGAGAACTCGAATGGTCGAAAGGATTTTCTATTCTTGATTCAGAGACTGAATTGCTGCTCTGCCTTGAAAGAAGCTTGGATGCCGTTGATAAAGAAATCATCAAGGAATGTTTCTTAGACTTGGGTTCATTTCCTGAAGACCAAAGAATCCCTGCTGCTGCCCTCATTGATATCTGGGCAGAGTTATATGATGTGGATACAGATATAGAGTGCATTGCAAATCTCTACGAGCTAACCAAACGAAGTCTAGCTAATCTTGTTGTTACAAGGAAGGACAAGACTGAGGGGGACTGGTACTATAGTGAGCACTTTGTTACCCAGCATGATGTTCTTAGGGAGCTGGCTATCTACAACACAAAAACAGGACCGGTAGAACATAGAGAAAGACTGATTATTGACATATGTGGAGACAAACTTCCAAAATGGTGGAGAGAACAGAAGCATCAGCCGATGAAGGCCCGCTTATTATCCATAACAACTGATGAAGGGTTTTCTTCAAAATGGCACGACATGCAAATGCCACAAGTTGAGGTTTTAGTGTTGAATTTCCAGACAAAGAACTATGCCTTACCCAACTCCGTGGTGAACATGGATGAATTGAAGGCTGTGATAGTCACAAATTATGGTTTCTTACCTGCTGAATTAAGTAACTTTCAACTTTTGAGTTCATTACCAAATCTTAAGAGAATCAGATTAGAACGCATCTCAATTCCTTCCATAACCAAGAATCCCATACATTTGGCGGGTCTGAAGAAGATATCCTTGTTCATGTGTAACATTGGTGAAGCATTCAACAACTGTGCCATCTCAATCTCATCAGCATTCCCAAATCTAGAGGAAATGAACATCGACTATTGCAGTGATTTAATTGAATTGCCCTCCGAGGTTTGTGATCTTATTAAATTAAGGAAGCTCAGTGTCACTAACTGTCATAAGCTATCTGCCTTGCCTGAAGGGATTGGAAATTTGGAAAATTTAGAAATGTTGAGGCTAAGATCCTGCACAGAACTGTCGAAGCTTCCAACCTCGATGAAGTACCTTGGAAAGGTAAACTTTCTTGACATATCTGATTGCTTCAGCATCAAGGTGTTGCCCGAAGACATTGGTGAAATGAGTAGTTTAAGAAAGATCAACATGAGACAATGCTCAAGGTTGCAAGAGCTGCCTCCATCAGTCATGGGTCTTGAGCAGTTAAAGGAAGTGGTCTGTGATGAAGAAACAAAATATTTATGGGAACCCATCTCATCGTATCTCAAGAACGTAACGATAATTGTGGCCAAAGAGAATATGAACCTAAATTGGCTCCACAAGACTCGGTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
NB-ARC RPW8

Protein Analysis

845

Amino Acids

96.53

Weight (kDa)

6.39

Isoelectric Point (pI)

42.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RPW8 PF05659 34 - 162 6.7e-23 Arabidopsis broad-spectrum mildew resistance protein RPW8
NB-ARC PF00931 200 - 358 7.7e-16 NB-ARC domain
AAA_22 PF13401 214 - 316 2.6e-06 AAA domain
LRR_14 PF23598 676 - 780 5.8e-12 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 713, 991
Acc36I ACCTGC 1 cut(s) 1855
Acc65I GGTACC 1 cut(s) 556
AccB1I GGYRCC 2 cut(s) 556, 817
AccI GTMKAC 1 cut(s) 357
AccII CGCG 2 cut(s) 38, 1209
AccIII TCCGGA 1 cut(s) 1117
AciI CCGC 7 cut(s) 96, 108, 554, 572, 1185, 1672, 1955
AclI AACGTT 1 cut(s) 432
AclWI GGATC 5 cut(s) 270, 359, 931, 1047, 2202
AcoI YGGCCR 1 cut(s) 2487
AcsI RAATTY 6 cut(s) 52, 967, 998, 1756, 2176, 2185
AcuI CTGAAG 5 cut(s) 51, 1368, 1982, 2184, 2272
AfaI GTAC 4 cut(s) 368, 558, 1508, 2249
AfiI CCNNNNNNNGG 2 cut(s) 577, 2257
AflII CTTAAG 1 cut(s) 1892
AflIII ACRYGT 1 cut(s) 636
AgeI ACCGGT 1 cut(s) 1579
AjiI CACGTC 1 cut(s) 852
AjnI CCWGG 1 cut(s) 903
Alw21I GWGCWC 3 cut(s) 321, 1097, 1521
Alw26I GTCTC 4 cut(s) 122, 1250, 1614, 2344
AlwI GGATC 5 cut(s) 270, 359, 931, 1047, 2202
AlwNI CAGNNNCTG 1 cut(s) 1259
Ama87I CYCGRG 1 cut(s) 152
Aor13HI TCCGGA 1 cut(s) 1117
AoxI GGCC 4 cut(s) 97, 148, 1668, 2487
ApeKI GCWGC 5 cut(s) 856, 1267, 1367, 1370, 2374
ApoI RAATTY 6 cut(s) 52, 967, 998, 1756, 2176, 2185
AsiGI ACCGGT 1 cut(s) 1579
Asp700I GAANNNNTTC 2 cut(s) 740, 933
Asp718I GGTACC 1 cut(s) 556
AspLEI GCGC 3 cut(s) 40, 139, 1209
AspS9I GGNCC 3 cut(s) 148, 1577, 1669
AsuC2I CCSGG 2 cut(s) 663, 815
AsuHPI GGTGA 5 cut(s) 484, 994, 1807, 2006, 2330
AsuII TTCGAA 1 cut(s) 325
AvaI CYCGRG 1 cut(s) 152
AvaII GGWCC 1 cut(s) 1577
BaeI ACNNNNGTAYC 2 cut(s) 1498, 1531
BalI TGGCCA 1 cut(s) 2489
BanI GGYRCC 2 cut(s) 556, 817
BanII GRGCYC 2 cut(s) 321, 1097
BarI GAAGNNNNNNTAC 2 cut(s) 549, 581
BbsI GAAGAC 2 cut(s) 1356, 2316
Bbv12I GWGCWC 3 cut(s) 321, 1097, 1521
BbvI GCAGC 5 cut(s) 843, 1254, 1354, 1357, 2361
BccI CCATC 5 cut(s) 339, 387, 2024, 2389, 2459
BceAI ACGGC 1 cut(s) 1280
BciT130I CCWGG 1 cut(s) 905
BciVI GTATCC 2 cut(s) 513, 1402
BclI TGATCA 1 cut(s) 949
BcnI CCSGG 2 cut(s) 663, 815
BcoDI GTCTC 4 cut(s) 122, 1250, 1614, 2344
BfaI CTAG 5 cut(s) 176, 575, 990, 1460, 2045
BfmI CTRYAG 1 cut(s) 1510
BfrI CTTAAG 1 cut(s) 1892
BfuAI ACCTGC 1 cut(s) 1855
BfuI GTATCC 2 cut(s) 513, 1402
BglI GCCNNNNNGGC 1 cut(s) 105
BglII AGATCT 1 cut(s) 1111
BisI GCNGC 6 cut(s) 97, 857, 1268, 1368, 1371, 2375
BlsI GCNGC 6 cut(s) 98, 858, 1269, 1369, 1372, 2376
Bme1390I CCNGG 3 cut(s) 663, 815, 905
Bme18I GGWCC 1 cut(s) 1577
BmeT110I CYCGRG 1 cut(s) 152
BmgBI CACGTC 1 cut(s) 852
BmgT120I GGNCC 3 cut(s) 148, 1577, 1669
BmiI GGNNCC 7 cut(s) 222, 558, 819, 1015, 1191, 2448, 2516
BmrFI CCNGG 3 cut(s) 663, 815, 905
BmsI GCATC 5 cut(s) 1085, 1282, 1663, 1923, 2301
BpiI GAAGAC 2 cut(s) 1356, 2316
BpmI CTGGAG 1 cut(s) 959
Bpu10I CCTNAGC 1 cut(s) 27
Bpu14I TTCGAA 1 cut(s) 325
BpuEI CTTGAG 4 cut(s) 584, 2344, 2417, 2450
BpuMI CCSGG 2 cut(s) 663, 815
BsaBI GATNNNNATC 2 cut(s) 795, 928
BsaI GGTCTC 1 cut(s) 122
BsaJI CCNNGG 5 cut(s) 151, 1081, 1791, 2094, 2251
BsaWI WCCGGW 3 cut(s) 268, 1117, 1579
BsaXI ACNNNNNCTCC 2 cut(s) 212, 242
Bsc4I CCNNNNNNNGG 2 cut(s) 577, 2257
Bse118I RCCGGY 1 cut(s) 1579
Bse1I ACTGG 2 cut(s) 285, 1508
Bse3DI GCAATG 1 cut(s) 1425
Bse8I GATNNNNATC 2 cut(s) 795, 928
BseAI TCCGGA 1 cut(s) 1117
BseBI CCWGG 1 cut(s) 905
BseDI CCNNGG 5 cut(s) 151, 1081, 1791, 2094, 2251
BseGI GGATG 7 cut(s) 454, 674, 718, 913, 1076, 1297, 1810
BseJI GATNNNNATC 2 cut(s) 795, 928
BseLI CCNNNNNNNGG 2 cut(s) 577, 2257
BseMI GCAATG 1 cut(s) 1425
BseMII CTCAG 3 cut(s) 860, 1485, 2140
BseNI ACTGG 2 cut(s) 285, 1508
BseRI GAGGAG 1 cut(s) 320
BseXI GCAGC 5 cut(s) 843, 1254, 1354, 1357, 2361
BseYI CCCAGC 1 cut(s) 1530
BsgI GTGCAG 1 cut(s) 2197
Bsh1236I CGCG 2 cut(s) 38, 1209
BshFI GGCC 4 cut(s) 99, 150, 1670, 2489
BshNI GGYRCC 2 cut(s) 556, 817
BshTI ACCGGT 1 cut(s) 1579
BsiHKAI GWGCWC 3 cut(s) 321, 1097, 1521
BsiHKCI CYCGRG 1 cut(s) 152
BsiSI CCGG 5 cut(s) 269, 663, 815, 1118, 1580
BslFI GGGAC 1 cut(s) 1514
BslI CCNNNNNNNGG 2 cut(s) 577, 2257
BsmAI GTCTC 4 cut(s) 122, 1250, 1614, 2344
BsmFI GGGAC 1 cut(s) 1514
BsmI GAATGC 2 cut(s) 2000, 2033
BsnI GGCC 4 cut(s) 99, 150, 1670, 2489
Bso31I GGTCTC 1 cut(s) 122
BsoBI CYCGRG 1 cut(s) 152
Bsp119I TTCGAA 1 cut(s) 325
Bsp1286I GDGCHC 3 cut(s) 321, 1097, 1521
Bsp13I TCCGGA 1 cut(s) 1117
BspACI CCGC 7 cut(s) 96, 108, 554, 572, 1185, 1672, 1955
BspANI GGCC 4 cut(s) 99, 150, 1670, 2489
BspCNI CTCAG 3 cut(s) 861, 1486, 2139
BspEI TCCGGA 1 cut(s) 1117
BspFNI CGCG 2 cut(s) 38, 1209
BspHI TCATGA 1 cut(s) 1042
BspLI GGNNCC 7 cut(s) 222, 558, 819, 1015, 1191, 2448, 2516
BspMI ACCTGC 1 cut(s) 1855
BspPI GGATC 5 cut(s) 270, 359, 931, 1047, 2202
BspT104I TTCGAA 1 cut(s) 325
BspT107I GGYRCC 2 cut(s) 556, 817
BspTI CTTAAG 1 cut(s) 1892
BspTNI GGTCTC 1 cut(s) 122
BsrDI GCAATG 1 cut(s) 1425
BsrFI RCCGGY 1 cut(s) 1579
BsrI ACTGG 2 cut(s) 285, 1508
BssAI RCCGGY 1 cut(s) 1579
BssECI CCNNGG 5 cut(s) 151, 1081, 1791, 2094, 2251
BssT1I CCWWGG 2 cut(s) 1081, 2251
Bst2UI CCWGG 1 cut(s) 905
Bst4CI ACNGT 7 cut(s) 466, 539, 754, 1165, 2012, 2141, 2223
Bst6I CTCTTC 2 cut(s) 411, 605
BstAFI CTTAAG 1 cut(s) 1892
BstAPI GCANNNNNTGC 2 cut(s) 1723, 2374
BstBI TTCGAA 1 cut(s) 325
BstC8I GCNNGC 2 cut(s) 1554, 1672
BstDEI CTNAG 8 cut(s) 27, 381, 869, 1327, 1494, 1544, 2126, 2204
BstDSI CCRYGG 1 cut(s) 1791
BstENI CCTNNNNNAGG 1 cut(s) 2255
BstF5I GGATG 7 cut(s) 454, 674, 718, 913, 1076, 1297, 1810
BstFNI CGCG 2 cut(s) 38, 1209
BstHHI GCGC 3 cut(s) 40, 139, 1209
BstMAI GTCTC 4 cut(s) 122, 1250, 1614, 2344
BstMWI GCNNNNNNNGC 4 cut(s) 105, 551, 1723, 2374
BstNI CCWGG 1 cut(s) 905
BstNSI RCATGY 2 cut(s) 20, 1726
BstSCI CCNGG 3 cut(s) 661, 813, 903
BstSFI CTRYAG 1 cut(s) 1510
BstUI CGCG 2 cut(s) 38, 1209
BstV1I GCAGC 5 cut(s) 843, 1254, 1354, 1357, 2361
BstV2I GAAGAC 2 cut(s) 1356, 2316
BstX2I RGATCY 3 cut(s) 262, 1111, 2207
BstXI CCANNNNNNTGG 3 cut(s) 1638, 1792, 1951
BstYI RGATCY 3 cut(s) 262, 1111, 2207
BsuI GTATCC 2 cut(s) 513, 1402
BsuRI GGCC 4 cut(s) 99, 150, 1670, 2489
BtgI CCRYGG 1 cut(s) 1791
BtgZI GCGATG 1 cut(s) 1067
BtrI CACGTC 1 cut(s) 852
BtsCI GGATG 7 cut(s) 454, 674, 718, 913, 1076, 1297, 1810
BtsI GCAGTG 2 cut(s) 847, 2077
BtsIMutI CAGTG 5 cut(s) 544, 847, 1170, 2077, 2134
BveI ACCTGC 1 cut(s) 1855
Cac8I GCNNGC 2 cut(s) 1554, 1672
CaiI CAGNNNCTG 1 cut(s) 1259
CciI TCATGA 1 cut(s) 1042
CfoI GCGC 3 cut(s) 40, 139, 1209
Cfr10I RCCGGY 1 cut(s) 1579
Cfr13I GGNCC 3 cut(s) 148, 1577, 1669
Csp6I GTAC 4 cut(s) 367, 557, 1507, 2248
CspAI ACCGGT 1 cut(s) 1579
CviAII CATG 8 cut(s) 17, 1043, 1535, 1723, 1801, 1981, 2347, 2389
CviQI GTAC 4 cut(s) 367, 557, 1507, 2248
DdeI CTNAG 8 cut(s) 27, 381, 869, 1327, 1494, 1544, 2126, 2204
DrdI GACNNNNNNGTC 2 cut(s) 713, 991
DseDI GACNNNNNNGTC 2 cut(s) 713, 991
EaeI YGGCCR 1 cut(s) 2487
Eam1104I CTCTTC 2 cut(s) 411, 605
EarI CTCTTC 2 cut(s) 411, 605
Ecl136II GAGCTC 2 cut(s) 319, 1095
Eco130I CCWWGG 2 cut(s) 1081, 2251
Eco24I GRGCYC 2 cut(s) 321, 1097
Eco31I GGTCTC 1 cut(s) 122
Eco32I GATATC 2 cut(s) 1384, 1971
Eco47I GGWCC 1 cut(s) 1577
Eco53kI GAGCTC 2 cut(s) 319, 1095
Eco57I CTGAAG 5 cut(s) 51, 1368, 1982, 2184, 2272
Eco88I CYCGRG 1 cut(s) 152
EcoICRI GAGCTC 2 cut(s) 319, 1095
EcoNI CCTNNNNNAGG 1 cut(s) 2255
EcoO109I RGGNCCY 1 cut(s) 148
EcoRII CCWGG 1 cut(s) 903
EcoRV GATATC 2 cut(s) 1384, 1971
EcoT14I CCWWGG 2 cut(s) 1081, 2251
EcoT38I GRGCYC 2 cut(s) 321, 1097
ErhI CCWWGG 2 cut(s) 1081, 2251
FaeI CATG 8 cut(s) 20, 1046, 1538, 1726, 1804, 1984, 2350, 2392
FalI AAGNNNNNCTT 8 cut(s) 84, 116, 1658, 1690, 1958, 1990, 2249, 2281
FaqI GGGAC 1 cut(s) 1514
FatI CATG 8 cut(s) 16, 1042, 1534, 1722, 1800, 1980, 2346, 2388
FauI CCCGC 5 cut(s) 101, 579, 1178, 1679, 1948
FauNDI CATATG 1 cut(s) 1613
FbaI TGATCA 1 cut(s) 949
FblI GTMKAC 1 cut(s) 357
Fnu4HI GCNGC 6 cut(s) 97, 857, 1268, 1368, 1371, 2375
FokI GGATG 7 cut(s) 461, 681, 725, 920, 1063, 1304, 1817
FriOI GRGCYC 2 cut(s) 321, 1097
Fsp4HI GCNGC 6 cut(s) 97, 857, 1268, 1368, 1371, 2375
FspBI CTAG 5 cut(s) 176, 575, 990, 1460, 2045
GlaI GCGC 3 cut(s) 39, 138, 1208
GluI GCNGC 6 cut(s) 97, 857, 1268, 1368, 1371, 2375
GsaI CCCAGC 1 cut(s) 1534
GsuI CTGGAG 1 cut(s) 959
HaeIII GGCC 4 cut(s) 99, 150, 1670, 2489
HapII CCGG 5 cut(s) 269, 663, 815, 1118, 1580
HhaI GCGC 3 cut(s) 40, 139, 1209
Hin1II CATG 8 cut(s) 20, 1046, 1538, 1726, 1804, 1984, 2350, 2392
Hin6I GCGC 3 cut(s) 38, 137, 1207
HinP1I GCGC 3 cut(s) 38, 137, 1207
HincII GTYRAC 1 cut(s) 34
HindII GTYRAC 1 cut(s) 34
HindIII AAGCTT 4 cut(s) 543, 617, 1285, 2228
HpaI GTTAAC 1 cut(s) 34
HpaII CCGG 5 cut(s) 269, 663, 815, 1118, 1580
HphI GGTGA 5 cut(s) 484, 994, 1807, 2006, 2330
Hpy166II GTNNAC 4 cut(s) 34, 358, 1798, 2263
Hpy8I GTNNAC 4 cut(s) 34, 358, 1798, 2263
HpyCH4III ACNGT 7 cut(s) 466, 539, 754, 1165, 2012, 2141, 2223
HpyCH4IV ACGT 4 cut(s) 432, 636, 851, 2472
HpyF10VI GCNNNNNNNGC 4 cut(s) 105, 551, 1723, 2374
HpyF3I CTNAG 8 cut(s) 27, 381, 869, 1327, 1494, 1544, 2126, 2204
HpySE526I ACGT 4 cut(s) 432, 636, 851, 2472
Hsp92II CATG 8 cut(s) 20, 1046, 1538, 1726, 1804, 1984, 2350, 2392
HspAI GCGC 3 cut(s) 38, 137, 1207
Kpn2I TCCGGA 1 cut(s) 1117
KpnI GGTACC 1 cut(s) 560
Ksp22I TGATCA 1 cut(s) 949
KspAI GTTAAC 1 cut(s) 34
LmnI GCTCC 7 cut(s) 157, 220, 324, 664, 1189, 1549, 2520
Lsp1109I GCAGC 5 cut(s) 843, 1254, 1354, 1357, 2361
LweI GCATC 5 cut(s) 1085, 1282, 1663, 1923, 2301
MaeI CTAG 5 cut(s) 176, 575, 990, 1460, 2045
MaeII ACGT 4 cut(s) 432, 636, 851, 2472
MflI RGATCY 3 cut(s) 262, 1111, 2207
MhlI GDGCHC 3 cut(s) 321, 1097, 1521
MlsI TGGCCA 1 cut(s) 2489
MluNI TGGCCA 1 cut(s) 2489
MlyI GAGTC 2 cut(s) 206, 2518
MmeI TCCRAC 3 cut(s) 273, 562, 2258
Mox20I TGGCCA 1 cut(s) 2489
MroI TCCGGA 1 cut(s) 1117
MroXI GAANNNNTTC 2 cut(s) 740, 933
MscI TGGCCA 1 cut(s) 2489
MslI CAYNNNNRTG 3 cut(s) 1047, 1727, 2297
Msp20I TGGCCA 1 cut(s) 2489
MspCI CTTAAG 1 cut(s) 1892
MspI CCGG 5 cut(s) 269, 663, 815, 1118, 1580
MspR9I CCNGG 3 cut(s) 663, 815, 905
Mva1269I GAATGC 2 cut(s) 2000, 2033
MvaI CCWGG 1 cut(s) 905
MvnI CGCG 2 cut(s) 38, 1209
MwoI GCNNNNNNNGC 4 cut(s) 105, 551, 1723, 2374
NciI CCSGG 2 cut(s) 663, 815
NdeI CATATG 1 cut(s) 1613
NlaIII CATG 8 cut(s) 20, 1046, 1538, 1726, 1804, 1984, 2350, 2392
NlaIV GGNNCC 7 cut(s) 222, 558, 819, 1015, 1191, 2448, 2516
NmuCI GTSAC 5 cut(s) 748, 847, 982, 1825, 2131
NspI RCATGY 2 cut(s) 20, 1726
NspV TTCGAA 1 cut(s) 325
PagI TCATGA 1 cut(s) 1042
PctI GAATGC 2 cut(s) 2000, 2033
PdmI GAANNNNTTC 2 cut(s) 740, 933
PfoI TCCNGGA 2 cut(s) 661, 903
PinAI ACCGGT 1 cut(s) 1579
PkrI GCNGC 6 cut(s) 98, 858, 1269, 1369, 1372, 2376
PleI GAGTC 2 cut(s) 206, 2518
PpsI GAGTC 2 cut(s) 206, 2518
Psp124BI GAGCTC 2 cut(s) 321, 1097
Psp1406I AACGTT 1 cut(s) 432
Psp6I CCWGG 1 cut(s) 903
PspFI CCCAGC 1 cut(s) 1530
PspGI CCWGG 1 cut(s) 903
PspN4I GGNNCC 7 cut(s) 222, 558, 819, 1015, 1191, 2448, 2516
PspPI GGNCC 3 cut(s) 148, 1577, 1669
PstNI CAGNNNCTG 1 cut(s) 1259
PsuI RGATCY 3 cut(s) 262, 1111, 2207
RsaI GTAC 4 cut(s) 368, 558, 1508, 2249
RsaNI GTAC 4 cut(s) 367, 557, 1507, 2248
RseI CAYNNNNRTG 3 cut(s) 1047, 1727, 2297
SacI GAGCTC 2 cut(s) 321, 1097
SatI GCNGC 6 cut(s) 97, 857, 1268, 1368, 1371, 2375
Sau96I GGNCC 3 cut(s) 148, 1577, 1669
SchI GAGTC 2 cut(s) 206, 2518
ScrFI CCNGG 3 cut(s) 663, 815, 905
SduI GDGCHC 3 cut(s) 321, 1097, 1521
SfaNI GCATC 5 cut(s) 1085, 1282, 1663, 1923, 2301
SfcI CTRYAG 1 cut(s) 1510
SfuI TTCGAA 1 cut(s) 325
SinI GGWCC 1 cut(s) 1577
SmiMI CAYNNNNRTG 3 cut(s) 1047, 1727, 2297
SmlI CTYRAG 5 cut(s) 599, 1892, 2359, 2396, 2465
SmoI CTYRAG 5 cut(s) 599, 1892, 2359, 2396, 2465
SsiI CCGC 7 cut(s) 96, 108, 554, 572, 1185, 1672, 1955
SspI AATATT 2 cut(s) 781, 2438
SspMI CTAG 5 cut(s) 176, 575, 990, 1460, 2045
SstI GAGCTC 2 cut(s) 321, 1097
StyD4I CCNGG 3 cut(s) 661, 813, 903
StyI CCWWGG 2 cut(s) 1081, 2251
TaaI ACNGT 7 cut(s) 466, 539, 754, 1165, 2012, 2141, 2223
TaiI ACGT 4 cut(s) 435, 639, 854, 2475
TauI GCSGC 1 cut(s) 99
TscAI CASTG 5 cut(s) 544, 847, 1170, 2077, 2134
TseFI GTSAC 5 cut(s) 748, 847, 982, 1825, 2131
TseI GCWGC 5 cut(s) 856, 1267, 1367, 1370, 2374
Tsp45I GTSAC 5 cut(s) 748, 847, 982, 1825, 2131
TspGWI ACGGA 2 cut(s) 977, 1780
TspRI CASTG 5 cut(s) 544, 847, 1170, 2077, 2134
Vha464I CTTAAG 1 cut(s) 1892
VpaK11BI GGWCC 1 cut(s) 1577
XagI CCTNNNNNAGG 1 cut(s) 2255
XapI RAATTY 6 cut(s) 52, 967, 998, 1756, 2176, 2185
XbaI TCTAGA 1 cut(s) 2044
XceI RCATGY 2 cut(s) 20, 1726
XcmI CCANNNNNNNNNTGG 1 cut(s) 256
XmiI GTMKAC 1 cut(s) 357
XmnI GAANNNNTTC 2 cut(s) 740, 933
XspI CTAG 5 cut(s) 176, 575, 990, 1460, 2045
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.