MD02G1164700.v1.1

disease resistance

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
Physical Location & Seq
Forward (+)
14070269 .. 14073970
3702 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1164700.v1.1.491

Sequence Viewer

Length: 2427 bp
ATGGGAGGAGTTGGGGAGCTTTTTGCAGGTGCTGCTGTAGGAGCATTGTTTACTGTACTGTATGAGGTTGTTAAGGATGTCAAGGACAAGACTATGATGTTTAGAGAGCTTCTCGGAGATCTTGATTCCACGCTAGAAGCGTTAAAGCCGCTGATCAAAGACATAGCCAAGTACAAAGAGGTGTTGGATCAATCAAACAAGGAAGTAGAAAAAATTGGGAAACAAATGGCGAATGGGGACGAGCTAGTTCTCAAGTGCTACAAACTTAACTGGTGGAAAGGCTTCAAAAAGTATAAATACGCCAAGCAACTTCTCGATTTGGACAAGTGTCTAAACAGGTTGTTGACGGTACTGACTGTGGAGGGAATAAGGAACGGGTTCGAGAACTTGGCTGTTTCGAGGGAGACCTTGGCTGTGTCGAAGGAGACCTTGACTACTGTCCAGAAAAAGGGTTTGGTAGGAAACAAAGAGAATGTTGTCATACAAAAGCAAGAAGGATTTCATGATTTGGGTTCAGTTCCTGAACCTCCACATGTTACAGTTGGATTGGATGAGCCTTTGAGGGATTTGAAGGAGATGCTTCTTAAGGACGATGTCTCAATGTTAGTGCTGACTGCTACCGGAGGATGCGGGAAAACCACATTGGCAATGAAATTCTGTCAAGATGAGGAAGTCAAAGATAAATTCAAGAAAAATATCTTCTTCGTCACCGTTTCTAAAGAGCCCAACTTAGATGTTGTAGAAGAGCTATATCAACACATGAAGTCTCAGGAAGCAACACAAGATCCTATACTGTTGGTCCTGGATGATGTTTGGTTCAAATCCAAATTTCTTCTTCAGCAGTTTGATGAATTGAAATCGCGAAATTGCAAGATCTTGGTGACATCGAGATCTGAATTTCCAGGATTTGGCACTCCGTATAATCTCAAAGCTTTGAATGATGAAGATTCAATGACTCTTTTGCATCATTCAGCATCCCTGGGAGATAGCTCGTCTGTTCCAGAAGATCTTCTGAGAAAGATACTAAAGCACTGTAAGGGAGTGCCCCTTGCCATTACAGTGACCGGGAAATCACTTCGCGGAAAAGCTACAGAATTCTGGCGTTCAAGACTAGCAGACTGGTCAAAAGGTTCTATTCTTGATTCTGAGACTGAGTTGCTTCTTCGCCTTCAAAGTAGCATAGATGCCTTAGATGAAAAAGAGGTTATCATCAGGGAATGTTTCACAGACCTTGTTTCATTTCCTGAAGATCAAAGAATCTCTGCTGCTGCTTTCATTGATATGTGGGCAGAGTTATATAAGCTAGATGAGGACTTTCTGTCCATTAAGAACCTCCACGAACTTGCCCGCAGAGGTCTGGCAAATCTTGTGATCACTAGGAAGGAGAATATAGAGATTATGGATGACTACTACATCGAACACTTTGTTAGCCAGCATGATATGCTGAGAGAGCTGGCTATCTACAATGCAAAACTAGACCCAATAGAAGAAAGAAAAAGACTGATTGTCGTAAGTGGACACAATCAACCCAAGTGGTTGATGGAGCAGAAGTCTCAACCCATCAATGCTCGCCTATTGTCTATCTCCTCTGATGGAATATTCCCAACACAATGGCAGAGTGTTCATCTACCACATGTTGAGGTTCTAGTTTTGAATTTTAAGACAGTGAACAATGCCTTACCTGAATTTGTGCAGAAAATTGACAAACTGAAGGTTCTAATAGTCACAAACTATGGTTTATTGCCTACTGAATTGAGTAATTTTGATATTCTGGAATCATTATCAAATCTGAAGAGAATCAGATTAGAGCGCATTTCAATTCATTCCATAACCAAGAACTTCGTACCATTGAAGAGTCTAAAGAAGATATCTTTGTTCATGTGTAACATGAGTCAAGCTTTCCACAATTGTTCCATCAAAATTTCAGAGGCCTGGCCAGGTTTAGAGGAAATGAATATCGACTATTGCCATGATTTGGTGGAACTGCCTGCCGAGCTTTGTGATCTTGTTCATATGAAGATGCTCAGTATCACCAACTGCCATAAGCTATCTGCCTTGCCTGAAGAGATCGGAAAGCTGGAGAATTTGGATGTACTGAGACTAAGGTCCTGTACAGACTTGGTAAGGCTTCCGGTCTCGATTGAGAACCTCACTAAGTTGTGCTGTCTTGACATGTATGATTGTTTGGGCATTAGGAAGTTGCCTGAAGGCATTGGTAATATGAGCGGTTTAAGAAAGATCAACATGGGACAATGCTCAAGTTTGGAAGAGTTGCCTCTATCAGTGTGGGATCTTGACGAGCAGTTAGAAGAAGTGATTTGTGATGAAGAGAAGAAACATTTGTGGGAATCCTTCTTAGCCAGAGACAAAATCAAGGTGGCAAAAGAAAAAACCAATCTGAATTGGCTCGAAAAGCCTCAGTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

809

Amino Acids

92.08

Weight (kDa)

5.73

Isoelectric Point (pI)

39.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RPW8 PF05659 6 - 120 1.5e-28 Arabidopsis broad-spectrum mildew resistance protein RPW8
NB-ARC PF00931 185 - 323 5.4e-11 NB-ARC domain
LRR_14 PF23598 664 - 753 5.4e-16 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 17
Acc36I ACCTGC 1 cut(s) 17
AccB7I CCANNNNNTGG 2 cut(s) 908, 1975
AccBSI CCGCTC 1 cut(s) 2226
AccII CGCG 2 cut(s) 862, 1080
AciI CCGC 5 cut(s) 149, 630, 1080, 1348, 2226
AclWI GGATC 3 cut(s) 195, 779, 2298
AcoI YGGCCR 1 cut(s) 1934
AcsI RAATTY 9 cut(s) 653, 683, 827, 896, 1094, 1654, 1685, 1920, 2083
AcuI CTGAAG 6 cut(s) 821, 1266, 1730, 1811, 2082, 2226
AfaI GTAC 6 cut(s) 57, 173, 351, 1845, 2094, 2113
AfiI CCNNNNNNNGG 3 cut(s) 448, 908, 1975
AflII CTTAAG 1 cut(s) 584
AflIII ACRYGT 3 cut(s) 532, 1633, 2172
AhdI GACNNNNNGTC 2 cut(s) 1318, 1505
AjnI CCWGG 5 cut(s) 801, 901, 978, 1931, 1936
AjuI GAANNNNNNNTTGG 4 cut(s) 437, 469, 626, 658
Alw26I GTCTC 9 cut(s) 398, 419, 601, 771, 1142, 1557, 2092, 2140, 2358
AlwI GGATC 3 cut(s) 195, 779, 2298
AlwNI CAGNNNCTG 2 cut(s) 32, 521
AoxI GGCC 2 cut(s) 1929, 1934
ApeKI GCWGC 3 cut(s) 32, 1265, 1268
ApoI RAATTY 9 cut(s) 653, 683, 827, 896, 1094, 1654, 1685, 1920, 2083
Asp700I GAANNNNTTC 4 cut(s) 281, 377, 498, 1008
AspLEI GCGC 1 cut(s) 1812
AspS9I GGNCC 2 cut(s) 799, 2106
AsuC2I CCSGG 1 cut(s) 1066
AsuHPI GGTGA 3 cut(s) 700, 892, 2023
AvaII GGWCC 2 cut(s) 799, 2106
BaeGI GKGCMC 1 cut(s) 1047
BalI TGGCCA 1 cut(s) 1936
BanII GRGCYC 1 cut(s) 726
BbvI GCAGC 3 cut(s) 19, 1252, 1255
BccI CCATC 4 cut(s) 1534, 1568, 1586, 1922
BciT130I CCWGG 5 cut(s) 803, 903, 980, 1933, 1938
BclI TGATCA 2 cut(s) 153, 1371
BcnI CCSGG 1 cut(s) 1066
BcoDI GTCTC 9 cut(s) 398, 419, 601, 771, 1142, 1557, 2092, 2140, 2358
BfaI CTAG 7 cut(s) 134, 245, 1112, 1304, 1377, 1475, 1646
BfmI CTRYAG 2 cut(s) 36, 1089
BfrI CTTAAG 1 cut(s) 584
BfuAI ACCTGC 1 cut(s) 17
BglII AGATCT 4 cut(s) 118, 873, 890, 1006
BisI GCNGC 4 cut(s) 33, 149, 1266, 1269
BlsI GCNGC 4 cut(s) 34, 150, 1267, 1270
Bme1390I CCNGG 6 cut(s) 803, 903, 980, 1066, 1933, 1938
Bme18I GGWCC 2 cut(s) 799, 2106
BmeRI GACNNNNNGTC 2 cut(s) 1318, 1505
BmgT120I GGNCC 2 cut(s) 799, 2106
BmrFI CCNGG 6 cut(s) 803, 903, 980, 1066, 1933, 1938
BmsI GCATC 6 cut(s) 567, 617, 973, 983, 1174, 2010
BoxI GACNNNNGTC 3 cut(s) 327, 437, 2104
BplI GAGNNNNNCTC 2 cut(s) 96, 128
BpmI CTGGAG 1 cut(s) 2099
BpuEI CTTGAG 2 cut(s) 236, 2242
BpuMI CCSGG 1 cut(s) 1066
BsaI GGTCTC 3 cut(s) 398, 419, 2140
BsaJI CCNNGG 3 cut(s) 408, 978, 979
BsaWI WCCGGW 2 cut(s) 620, 2131
BsaXI ACNNNNNCTCC 2 cut(s) 1535, 1565
Bsc4I CCNNNNNNNGG 3 cut(s) 448, 908, 1975
Bse1I ACTGG 2 cut(s) 275, 1124
Bse3DI GCAATG 1 cut(s) 654
BseBI CCWGG 5 cut(s) 803, 903, 980, 1933, 1938
BseDI CCNNGG 3 cut(s) 408, 978, 979
BseGI GGATG 7 cut(s) 82, 556, 632, 811, 974, 1408, 2095
BseLI CCNNNNNNNGG 3 cut(s) 448, 908, 1975
BseMI GCAATG 1 cut(s) 654
BseMII CTCAG 7 cut(s) 782, 1004, 1137, 1143, 1436, 2038, 2087
BseNI ACTGG 2 cut(s) 275, 1124
BseRI GAGGAG 2 cut(s) 21, 1576
BseSI GKGCMC 1 cut(s) 1047
BseXI GCAGC 3 cut(s) 19, 1252, 1255
BsgI GTGCAG 1 cut(s) 1712
Bsh1236I CGCG 2 cut(s) 862, 1080
BshFI GGCC 2 cut(s) 1931, 1936
BsiSI CCGG 3 cut(s) 621, 1065, 2132
BslFI GGGAC 2 cut(s) 251, 2262
BslI CCNNNNNNNGG 3 cut(s) 448, 908, 1975
BsmAI GTCTC 9 cut(s) 398, 419, 601, 771, 1142, 1557, 2092, 2140, 2358
BsmFI GGGAC 2 cut(s) 251, 2262
BsnI GGCC 2 cut(s) 1931, 1936
Bso31I GGTCTC 3 cut(s) 398, 419, 2140
Bsp1286I GDGCHC 2 cut(s) 726, 1047
Bsp1407I TGTACA 1 cut(s) 2111
Bsp68I TCGCGA 1 cut(s) 862
BspACI CCGC 5 cut(s) 149, 630, 1080, 1348, 2226
BspANI GGCC 2 cut(s) 1931, 1936
BspCNI CTCAG 7 cut(s) 781, 1005, 1138, 1144, 1437, 2037, 2088
BspFNI CGCG 2 cut(s) 862, 1080
BspHI TCATGA 1 cut(s) 502
BspMI ACCTGC 1 cut(s) 17
BspPI GGATC 3 cut(s) 195, 779, 2298
BspQI GCTCTTC 1 cut(s) 738
BspTI CTTAAG 1 cut(s) 584
BspTNI GGTCTC 3 cut(s) 398, 419, 2140
BsrBI CCGCTC 1 cut(s) 2226
BsrDI GCAATG 1 cut(s) 654
BsrGI TGTACA 1 cut(s) 2111
BsrI ACTGG 2 cut(s) 275, 1124
BssECI CCNNGG 3 cut(s) 408, 978, 979
BssT1I CCWWGG 1 cut(s) 408
Bst2UI CCWGG 5 cut(s) 803, 903, 980, 1933, 1938
Bst6I CTCTTC 6 cut(s) 738, 1787, 1847, 2058, 2262, 2322
BstAFI CTTAAG 1 cut(s) 584
BstAPI GCANNNNNTGC 2 cut(s) 32, 1441
BstAUI TGTACA 1 cut(s) 2111
BstC8I GCNNGC 5 cut(s) 1348, 1433, 1455, 1570, 1989
BstF5I GGATG 7 cut(s) 82, 556, 632, 811, 974, 1408, 2095
BstFNI CGCG 2 cut(s) 862, 1080
BstHHI GCGC 1 cut(s) 1812
BstMAI GTCTC 9 cut(s) 398, 419, 601, 771, 1142, 1557, 2092, 2140, 2358
BstMWI GCNNNNNNNGC 6 cut(s) 32, 41, 1441, 1450, 1993, 2413
BstNI CCWGG 5 cut(s) 803, 903, 980, 1933, 1938
BstNSI RCATGY 3 cut(s) 536, 1637, 2176
BstPAI GACNNNNGTC 3 cut(s) 327, 437, 2104
BstSCI CCNGG 6 cut(s) 801, 901, 978, 1064, 1931, 1936
BstSFI CTRYAG 2 cut(s) 36, 1089
BstSLI GKGCMC 1 cut(s) 1047
BstUI CGCG 2 cut(s) 862, 1080
BstV1I GCAGC 3 cut(s) 19, 1252, 1255
BstX2I RGATCY 6 cut(s) 118, 784, 873, 890, 1006, 2290
BstXI CCANNNNNNTGG 1 cut(s) 1611
BstYI RGATCY 6 cut(s) 118, 784, 873, 890, 1006, 2290
BsuRI GGCC 2 cut(s) 1931, 1936
BtsCI GGATG 7 cut(s) 82, 556, 632, 811, 974, 1408, 2095
BtsIMutI CAGTG 4 cut(s) 1030, 1065, 1671, 2289
BtuMI TCGCGA 1 cut(s) 862
BveI ACCTGC 1 cut(s) 17
Cac8I GCNNGC 5 cut(s) 1348, 1433, 1455, 1570, 1989
CaiI CAGNNNCTG 2 cut(s) 32, 521
CciI TCATGA 1 cut(s) 502
CfoI GCGC 1 cut(s) 1812
Cfr13I GGNCC 2 cut(s) 799, 2106
Csp6I GTAC 6 cut(s) 56, 172, 350, 1844, 2093, 2112
CspCI CAANNNNNGTGG 2 cut(s) 1514, 1549
CviQI GTAC 6 cut(s) 56, 172, 350, 1844, 2093, 2112
DriI GACNNNNNGTC 2 cut(s) 1318, 1505
EaeI YGGCCR 1 cut(s) 1934
Eam1104I CTCTTC 6 cut(s) 738, 1787, 1847, 2058, 2262, 2322
Eam1105I GACNNNNNGTC 2 cut(s) 1318, 1505
EarI CTCTTC 6 cut(s) 738, 1787, 1847, 2058, 2262, 2322
Eco130I CCWWGG 1 cut(s) 408
Eco147I AGGCCT 1 cut(s) 1931
Eco24I GRGCYC 1 cut(s) 726
Eco31I GGTCTC 3 cut(s) 398, 419, 2140
Eco32I GATATC 1 cut(s) 1869
Eco47I GGWCC 2 cut(s) 799, 2106
Eco57I CTGAAG 6 cut(s) 821, 1266, 1730, 1811, 2082, 2226
EcoO109I RGGNCCY 1 cut(s) 2106
EcoRI GAATTC 1 cut(s) 1094
EcoRII CCWGG 5 cut(s) 801, 901, 978, 1931, 1936
EcoRV GATATC 1 cut(s) 1869
EcoT14I CCWWGG 1 cut(s) 408
EcoT38I GRGCYC 1 cut(s) 726
ErhI CCWWGG 1 cut(s) 408
FalI AAGNNNNNCTT 2 cut(s) 413, 445
FaqI GGGAC 2 cut(s) 251, 2262
FauI CCCGC 2 cut(s) 623, 1355
FauNDI CATATG 1 cut(s) 2013
FbaI TGATCA 2 cut(s) 153, 1371
Fnu4HI GCNGC 4 cut(s) 33, 149, 1266, 1269
FokI GGATG 7 cut(s) 89, 563, 639, 818, 961, 1415, 2102
FriOI GRGCYC 1 cut(s) 726
Fsp4HI GCNGC 4 cut(s) 33, 149, 1266, 1269
FspBI CTAG 7 cut(s) 134, 245, 1112, 1304, 1377, 1475, 1646
GlaI GCGC 1 cut(s) 1811
GluI GCNGC 4 cut(s) 33, 149, 1266, 1269
GsuI CTGGAG 1 cut(s) 2099
HaeIII GGCC 2 cut(s) 1931, 1936
HapII CCGG 3 cut(s) 621, 1065, 2132
HhaI GCGC 1 cut(s) 1812
Hin6I GCGC 1 cut(s) 1810
HinP1I GCGC 1 cut(s) 1810
HincII GTYRAC 1 cut(s) 345
HindII GTYRAC 1 cut(s) 345
HindIII AAGCTT 2 cut(s) 930, 1896
HpaII CCGG 3 cut(s) 621, 1065, 2132
HphI GGTGA 3 cut(s) 700, 892, 2023
Hpy166II GTNNAC 4 cut(s) 51, 345, 1517, 1669
Hpy8I GTNNAC 4 cut(s) 51, 345, 1517, 1669
HpyAV CCTTC 8 cut(s) 415, 488, 565, 1178, 1375, 1705, 2201, 2362
HpyCH4V TGCA 5 cut(s) 26, 870, 964, 1469, 1693
HpyF10VI GCNNNNNNNGC 6 cut(s) 32, 41, 1441, 1450, 1993, 2413
HspAI GCGC 1 cut(s) 1810
Ksp22I TGATCA 2 cut(s) 153, 1371
LguI GCTCTTC 1 cut(s) 738
LmnI GCTCC 3 cut(s) 16, 41, 1543
Lsp1109I GCAGC 3 cut(s) 19, 1252, 1255
LweI GCATC 6 cut(s) 567, 617, 973, 983, 1174, 2010
MaeI CTAG 7 cut(s) 134, 245, 1112, 1304, 1377, 1475, 1646
MaeIII GTNAC 6 cut(s) 535, 706, 880, 1060, 1723, 1883
MbiI CCGCTC 1 cut(s) 2226
MfeI CAATTG 1 cut(s) 1906
MflI RGATCY 6 cut(s) 118, 784, 873, 890, 1006, 2290
MhlI GDGCHC 2 cut(s) 726, 1047
MlsI TGGCCA 1 cut(s) 1936
MluNI TGGCCA 1 cut(s) 1936
MlyI GAGTC 3 cut(s) 949, 1864, 1900
MmeI TCCRAC 2 cut(s) 165, 523
Mox20I TGGCCA 1 cut(s) 1936
MroXI GAANNNNTTC 4 cut(s) 281, 377, 498, 1008
MscI TGGCCA 1 cut(s) 1936
MseI TTAA 7 cut(s) 72, 143, 267, 585, 1326, 1659, 2231
MslI CAYNNNNRTG 2 cut(s) 1058, 1280
Msp20I TGGCCA 1 cut(s) 1936
MspA1I CMGCKG 1 cut(s) 151
MspCI CTTAAG 1 cut(s) 584
MspI CCGG 3 cut(s) 621, 1065, 2132
MspR9I CCNGG 6 cut(s) 803, 903, 980, 1066, 1933, 1938
MunI CAATTG 1 cut(s) 1906
MvaI CCWGG 5 cut(s) 803, 903, 980, 1933, 1938
MvnI CGCG 2 cut(s) 862, 1080
MwoI GCNNNNNNNGC 6 cut(s) 32, 41, 1441, 1450, 1993, 2413
NciI CCSGG 1 cut(s) 1066
NdeI CATATG 1 cut(s) 2013
NmeAIII GCCGAG 1 cut(s) 2017
NmuCI GTSAC 4 cut(s) 706, 880, 1060, 1723
NruI TCGCGA 1 cut(s) 862
NspI RCATGY 3 cut(s) 536, 1637, 2176
PagI TCATGA 1 cut(s) 502
PaqCI CACCTGC 1 cut(s) 17
PasI CCCWGGG 1 cut(s) 979
PceI AGGCCT 1 cut(s) 1931
PciI ACATGT 3 cut(s) 532, 1633, 2172
PciSI GCTCTTC 1 cut(s) 738
PcsI WCGNNNNNNNCGW 1 cut(s) 137
PdmI GAANNNNTTC 4 cut(s) 281, 377, 498, 1008
PfeI GAWTC 7 cut(s) 125, 947, 1142, 1257, 1775, 1797, 2348
PflFI GACNNNGTC 1 cut(s) 593
PflMI CCANNNNNTGG 2 cut(s) 908, 1975
PfoI TCCNGGA 2 cut(s) 801, 901
PkrI GCNGC 4 cut(s) 34, 150, 1267, 1270
PleI GAGTC 3 cut(s) 949, 1863, 1899
PpsI GAGTC 3 cut(s) 949, 1863, 1899
PpuMI RGGWCCY 1 cut(s) 2106
PscI ACATGT 3 cut(s) 532, 1633, 2172
PshAI GACNNNNGTC 3 cut(s) 327, 437, 2104
Psp5II RGGWCCY 1 cut(s) 2106
Psp6I CCWGG 5 cut(s) 801, 901, 978, 1931, 1936
PspGI CCWGG 5 cut(s) 801, 901, 978, 1931, 1936
PspPI GGNCC 2 cut(s) 799, 2106
PspPPI RGGWCCY 1 cut(s) 2106
PstNI CAGNNNCTG 2 cut(s) 32, 521
PsuI RGATCY 6 cut(s) 118, 784, 873, 890, 1006, 2290
PsyI GACNNNGTC 1 cut(s) 593
RruI TCGCGA 1 cut(s) 862
RsaI GTAC 6 cut(s) 57, 173, 351, 1845, 2094, 2113
RsaNI GTAC 6 cut(s) 56, 172, 350, 1844, 2093, 2112
RseI CAYNNNNRTG 2 cut(s) 1058, 1280
SapI GCTCTTC 1 cut(s) 738
SaqAI TTAA 7 cut(s) 72, 143, 267, 585, 1326, 1659, 2231
SatI GCNGC 4 cut(s) 33, 149, 1266, 1269
Sau96I GGNCC 2 cut(s) 799, 2106
SchI GAGTC 3 cut(s) 949, 1864, 1900
ScrFI CCNGG 6 cut(s) 803, 903, 980, 1066, 1933, 1938
SduI GDGCHC 2 cut(s) 726, 1047
SfaNI GCATC 6 cut(s) 567, 617, 973, 983, 1174, 2010
SfcI CTRYAG 2 cut(s) 36, 1089
SinI GGWCC 2 cut(s) 799, 2106
SmiMI CAYNNNNRTG 2 cut(s) 1058, 1280
SmlI CTYRAG 3 cut(s) 251, 584, 2257
SmoI CTYRAG 3 cut(s) 251, 584, 2257
SseBI AGGCCT 1 cut(s) 1931
SsiI CCGC 5 cut(s) 149, 630, 1080, 1348, 2226
SspI AATATT 1 cut(s) 1599
SspMI CTAG 7 cut(s) 134, 245, 1112, 1304, 1377, 1475, 1646
StuI AGGCCT 1 cut(s) 1931
StyD4I CCNGG 6 cut(s) 801, 901, 978, 1064, 1931, 1936
StyI CCWWGG 1 cut(s) 408
TaqI TCGA 9 cut(s) 315, 381, 398, 419, 887, 1416, 1959, 2138, 2409
TatI WGTACW 4 cut(s) 55, 171, 2092, 2111
TauI GCSGC 1 cut(s) 151
TfiI GAWTC 7 cut(s) 125, 947, 1142, 1257, 1775, 1797, 2348
Tru1I TTAA 7 cut(s) 72, 143, 267, 585, 1326, 1659, 2231
Tru9I TTAA 7 cut(s) 72, 143, 267, 585, 1326, 1659, 2231
TscAI CASTG 4 cut(s) 1037, 1065, 1671, 2289
TseFI GTSAC 4 cut(s) 706, 880, 1060, 1723
TseI GCWGC 3 cut(s) 32, 1265, 1268
Tsp45I GTSAC 4 cut(s) 706, 880, 1060, 1723
TspGWI ACGGA 1 cut(s) 906
TspRI CASTG 4 cut(s) 1037, 1065, 1671, 2289
Tth111I GACNNNGTC 1 cut(s) 593
Van91I CCANNNNNTGG 2 cut(s) 908, 1975
Vha464I CTTAAG 1 cut(s) 584
VpaK11BI GGWCC 2 cut(s) 799, 2106
XapI RAATTY 9 cut(s) 653, 683, 827, 896, 1094, 1654, 1685, 1920, 2083
XceI RCATGY 3 cut(s) 536, 1637, 2176
XcmI CCANNNNNNNNNTGG 1 cut(s) 1537
XmnI GAANNNNTTC 4 cut(s) 281, 377, 498, 1008
XspI CTAG 7 cut(s) 134, 245, 1112, 1304, 1377, 1475, 1646
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.