Prupe.7G138500_v2.0.a1

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0000039
Physical Location & Seq
Reverse (-)
15482391 .. 15486012
3622 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G138500.2

Sequence Viewer

Length: 2457 bp
ATGGCATTGGCGGCAGTAGGAGGAGCTGCTCTAGGAGCGGTATTTGGGACGCTGCTTGATGGCGTTGTAGCGGTGACTTCGAAGGCTATAATGTTTAAATCCCACCTCAGAGATCTCAAATTCACCCTGGACTCTTTTCAACAAGTGGACGAAGATGTAGGACAACATCCCAACATAGTGTTTCGCCCAATGCAGGGCCTAGAAAGGTTTAGAATACAAATGGAGAAGGGCGCTCAGCTGGTTGACAAATGCTCAAAGGTTCGTCCATGGAAGTTGAACGCTTTCAAAAAGCCTATGTACACCAGCAAACTTGTTGCATTGAATGCATCTCTCAATACACTGTTAAGTGTACTGACAGTGCACATAATAAGCGATCTGAGGGCTCGGATGATCAATGTGGAGACAACGTTGAACCATATCGATGCGAATATTGTGGCACAATATCAAAATCAATATCAAAACCAAATTAGAGGTTGGTGTGCAATACCTGAGCCTCCACCCTTTACTGTTGGGTTGGATGTGCGTGTGGAGGAGTTGAAGATGGAGCTTCTTAGAGACGAGGCATCAATGCTTGTGGTGACTGGTCTTGGAGGATGCGGGAAAACCACACTGGCACAAATGATTTGCAAAGATCAGAAAGTCAAAGAGAAATTCAAAGACAATATCTTTTTCATCACTGTTTCAAAGAAGTCCAACTGCCTTGTTGTACAAGAACTATGTCGAAAAACCGGATCCCTGGTACCTTCTTTCCAAGAAGAAGCAATTGCATTTAACTGGCTACAAGAATTTCTGAATACACCAGAACAAGATCCTCTACTTTTGGTCCTGGATGATGTATATCCAGATTCAGACTCCCTTCTTGATAAGCTTGGTGAAGTCAAAAGGCCAAATCACAACATTTTGGTGACATCAAGAGTTAAATTTCCAAGATTTGGTCCTGCATATCCTTTAGGAACATTGGAACAAGGAGATGCAATGACTCTTTTTCGTCATTCAGCATCCCGGACTGATAGGAACTCTCATATACTGGACAATCTAGTAGAACAGATAGTTCAGCTCTGTAAGGGATTTCCACTTGCCATTACAACAATCGGAAGATCAGTTTGCGAACAGCCTACAGAGATTTGGGAGAAAAGAGTAGCGGAATTGTCTAAAGGTTCTTCTATTCTTGATTCTGAGGATTATTTGCTTGCTTGCCTCAAAAGTAGCTTAGATGCCTTGGATGAACGAATGCCTATCATCAAGGAATGCTTCATTGACCTTGCTTCATTTCCTGAAGATCGAAGTATCCCTGCTGTTGCTCTCATTGATATGTGGGCAGAGTTATATGGGCTAGATGAGGACTTTTGGTCCATTGCGAACATCCACGAGCTAACTAATCGTAATTTGGCCAATCTAGTTACAAGGAATGGAAAGATGGAGTTGGATAGCTATTACAATGAACACTTTGTTACGCAGCATGATATGCTTAGAAATCTGGCTATCCATCAGACTGGTCAGGACATAATAGGACAGAGAAAAAGGCTGATTATAGACATTTGTGGTGACAATCTCCCTAACTGGTGGAAAGAACACAAAAATAAGCCCAAGAAGACCCGCTTATTATCTATCTCAACTGATGGATCGTCCTCAGCAAAGTGGCACAATATGCATCTACCAAAAGCTGAGGTTCTAGTTCTGAATTTTCAGACAGAGAACTACGTTCTGCCCAAGTTTGTGAAGAAAATGTCCAAGTTGAAGGTTCTAATAGTCACAAATTATGGTGTCTTACAAGCTGACTTGAGTAATTTCAAGCTTTTGGGTTCTTTGCCTAATCTGAAGAGAATAAGATTAGAGCGCATTTCAATTCCTTCCGTAAGCAAGAACTCCATGCAGTTGAAGAGTCTGCAGAAGATATCTTTATTCATGTGCAGCGTCGGTCAAGCTTTCAGCAACTCTTCCATCCAAATCTTAGAGGCATTTCCAAATCTAGTGGAATTGAACATCGACTATTGCAATGATTTGGTGGAATTGCCTGCCAAGCTCTGTGATCTTATCCGCCTAAAGAAGTTCAGTATTACCAATTGTCATAAGCTATCCGCTTTGCCTAAAGAGATTGGACAGCTGGATAATGTAGAGGTTTTGAGGCTAAGGTCCTGCGTAAACTTGGAAGGGCTTCCTGGCTCGATTAAGAACCTCACTAGGTTAGACTTTCTTGACATAAGTAATTGTTTCAGCATGAAGGAGCTGCCTGAAGACATTGGGGAAATGAGTGGTTTAAGAAAGATCAACATGGGACAATGCTCAAGATTGAAAGAGTTGCCTCTATCAGTTTTGCATCTTGGGAAGTTACGGGAAGTGATATGCGATGATGAGACAAAAAAATTATGGGGAGAACCTTTCAAACCCAGTCTCACAAACCTACACATAACAGTGGTGAAAGAAGACTTCAACCTGAATTGGCTCTACAATCTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
NB-ARC RPW8

Protein Analysis

819

Amino Acids

92.49

Weight (kDa)

7.76

Isoelectric Point (pI)

37.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 739
AccB1I GGYRCC 1 cut(s) 739
AccB7I CCANNNNNTGG 1 cut(s) 932
AccBSI CCGCTC 1 cut(s) 38
AciI CCGC 8 cut(s) 11, 38, 71, 597, 1142, 1597, 2038, 2079
AclI AACGTT 1 cut(s) 407
AclWI GGATC 4 cut(s) 726, 739, 803, 1630
AcoI YGGCCR 1 cut(s) 1389
AcsI RAATTY 5 cut(s) 119, 650, 785, 920, 1681
AcuI CTGAAG 3 cut(s) 1296, 1838, 2253
AfaI GTAC 4 cut(s) 299, 351, 708, 741
AfiI CCNNNNNNNGG 3 cut(s) 193, 194, 932
AhdI GACNNNNNGTC 1 cut(s) 1348
AjnI CCWGG 4 cut(s) 126, 735, 825, 2158
Alw21I GWGCWC 1 cut(s) 363
Alw26I GTCTC 4 cut(s) 395, 549, 2348, 2396
Alw44I GTGCAC 1 cut(s) 359
AlwI GGATC 4 cut(s) 726, 739, 803, 1630
AoxI GGCC 3 cut(s) 196, 884, 1389
ApaLI GTGCAC 1 cut(s) 359
ApeKI GCWGC 5 cut(s) 26, 52, 1456, 1911, 2227
ApoI RAATTY 5 cut(s) 119, 650, 785, 920, 1681
Asp700I GAANNNNTTC 2 cut(s) 281, 2154
Asp718I GGTACC 1 cut(s) 739
AspLEI GCGC 2 cut(s) 233, 1839
AspS9I GGNCC 5 cut(s) 196, 823, 935, 1350, 2133
AsuC2I CCSGG 1 cut(s) 1003
AsuHPI GGTGA 7 cut(s) 85, 115, 589, 884, 916, 1556, 2428
AsuII TTCGAA 1 cut(s) 80
AvaII GGWCC 4 cut(s) 823, 935, 1350, 2133
BaeGI GKGCMC 1 cut(s) 363
BalI TGGCCA 1 cut(s) 1391
BamHI GGATCC 1 cut(s) 731
BanI GGYRCC 1 cut(s) 739
BanII GRGCYC 1 cut(s) 385
BauI CACGAG 1 cut(s) 1367
BbsI GAAGAC 3 cut(s) 1598, 2241, 2430
Bbv12I GWGCWC 1 cut(s) 363
BbvCI CCTCAGC 2 cut(s) 1630, 1665
BbvI GCAGC 5 cut(s) 13, 39, 1468, 1923, 2214
BccI CCATC 6 cut(s) 53, 535, 1411, 1494, 1613, 1949
BciT130I CCWGG 4 cut(s) 128, 737, 827, 2160
BciVI GTATCC 1 cut(s) 1298
BclI TGATCA 1 cut(s) 390
BcnI CCSGG 1 cut(s) 1003
BcoDI GTCTC 4 cut(s) 395, 549, 2348, 2396
BfaI CTAG 8 cut(s) 32, 200, 1037, 1334, 1397, 1673, 1970, 2181
BfmI CTRYAG 2 cut(s) 1116, 1886
BfoI RGCGCY 1 cut(s) 234
BfuI GTATCC 1 cut(s) 1298
BglII AGATCT 1 cut(s) 112
BisI GCNGC 6 cut(s) 12, 27, 53, 1457, 1912, 2228
BlpI GCTNAGC 1 cut(s) 234
BlsI GCNGC 6 cut(s) 13, 28, 54, 1458, 1913, 2229
Bme1390I CCNGG 5 cut(s) 128, 737, 827, 1003, 2160
Bme18I GGWCC 4 cut(s) 823, 935, 1350, 2133
BmeRI GACNNNNNGTC 1 cut(s) 1348
BmgT120I GGNCC 5 cut(s) 196, 823, 935, 1350, 2133
BmiI GGNNCC 2 cut(s) 733, 741
BmrFI CCNGG 5 cut(s) 128, 737, 827, 1003, 2160
BmrI ACTGGG 1 cut(s) 2382
BmsI GCATC 9 cut(s) 335, 412, 572, 584, 961, 1007, 1204, 1660, 2326
BmuI ACTGGG 1 cut(s) 2382
BpiI GAAGAC 3 cut(s) 1598, 2241, 2430
Bpu10I CCTNAGC 4 cut(s) 489, 1630, 1665, 2129
Bpu1102I GCTNAGC 1 cut(s) 234
Bpu14I TTCGAA 1 cut(s) 80
BpuEI CTTGAG 2 cut(s) 1801, 2269
BpuMI CCSGG 1 cut(s) 1003
Bsa29I ATCGAT 1 cut(s) 420
BsaBI GATNNNNATC 1 cut(s) 837
BsaJI CCNNGG 4 cut(s) 126, 266, 735, 1218
BsaWI WCCGGW 1 cut(s) 728
BsaXI ACNNNNNCTCC 2 cut(s) 392, 422
Bsc4I CCNNNNNNNGG 3 cut(s) 193, 194, 932
Bse1I ACTGG 7 cut(s) 586, 615, 779, 1032, 1498, 1565, 2388
Bse3DI GCAATG 3 cut(s) 981, 1353, 2002
Bse8I GATNNNNATC 1 cut(s) 837
BseBI CCWGG 4 cut(s) 128, 737, 827, 2160
BseCI ATCGAT 1 cut(s) 420
BseDI CCNNGG 4 cut(s) 126, 266, 735, 1218
BseGI GGATG 9 cut(s) 166, 393, 523, 599, 835, 998, 1228, 1362, 1941
BseJI GATNNNNATC 1 cut(s) 837
BseLI CCNNNNNNNGG 3 cut(s) 193, 194, 932
BseMI GCAATG 3 cut(s) 981, 1353, 2002
BseMII CTCAG 7 cut(s) 121, 248, 368, 480, 1167, 1644, 1656
BseNI ACTGG 7 cut(s) 586, 615, 779, 1032, 1498, 1565, 2388
BseRI GAGGAG 2 cut(s) 36, 545
BseSI GKGCMC 1 cut(s) 363
BseXI GCAGC 5 cut(s) 13, 39, 1468, 1923, 2214
BsgI GTGCAG 1 cut(s) 1930
BshFI GGCC 3 cut(s) 198, 886, 1391
BshNI GGYRCC 1 cut(s) 739
BshVI ATCGAT 1 cut(s) 420
BsiHKAI GWGCWC 1 cut(s) 363
BsiSI CCGG 2 cut(s) 729, 1003
BslFI GGGAC 2 cut(s) 61, 2289
BslI CCNNNNNNNGG 3 cut(s) 193, 194, 932
BsmAI GTCTC 4 cut(s) 395, 549, 2348, 2396
BsmBI CGTCTC 1 cut(s) 549
BsmFI GGGAC 2 cut(s) 61, 2289
BsmI GAATGC 3 cut(s) 328, 1236, 1253
BsnI GGCC 3 cut(s) 198, 886, 1391
Bsp119I TTCGAA 1 cut(s) 80
Bsp1286I GDGCHC 2 cut(s) 363, 385
Bsp1407I TGTACA 2 cut(s) 297, 706
Bsp1720I GCTNAGC 1 cut(s) 234
Bsp19I CCATGG 1 cut(s) 266
BspACI CCGC 8 cut(s) 11, 38, 71, 597, 1142, 1597, 2038, 2079
BspANI GGCC 3 cut(s) 198, 886, 1391
BspCNI CTCAG 7 cut(s) 120, 247, 369, 481, 1168, 1643, 1657
BspDI ATCGAT 1 cut(s) 420
BspLI GGNNCC 2 cut(s) 733, 741
BspMAI CTGCAG 1 cut(s) 1890
BspPI GGATC 4 cut(s) 726, 739, 803, 1630
BspT104I TTCGAA 1 cut(s) 80
BspT107I GGYRCC 1 cut(s) 739
BsrBI CCGCTC 1 cut(s) 38
BsrDI GCAATG 3 cut(s) 981, 1353, 2002
BsrGI TGTACA 2 cut(s) 297, 706
BsrI ACTGG 7 cut(s) 586, 615, 779, 1032, 1498, 1565, 2388
BssECI CCNNGG 4 cut(s) 126, 266, 735, 1218
BssSI CACGAG 1 cut(s) 1367
BssT1I CCWWGG 2 cut(s) 266, 1218
Bst2BI CACGAG 1 cut(s) 1367
Bst2UI CCWGG 4 cut(s) 128, 737, 827, 2160
Bst4CI ACNGT 5 cut(s) 342, 358, 508, 679, 2413
Bst6I CTCTTC 3 cut(s) 1814, 1874, 1942
BstAPI GCANNNNNTGC 3 cut(s) 323, 1465, 1648
BstAUI TGTACA 2 cut(s) 297, 706
BstBI TTCGAA 1 cut(s) 80
BstC8I GCNNGC 3 cut(s) 1191, 1195, 2016
BstDSI CCRYGG 1 cut(s) 266
BstF5I GGATG 9 cut(s) 166, 393, 523, 599, 835, 998, 1228, 1362, 1941
BstH2I RGCGCY 1 cut(s) 234
BstHHI GCGC 2 cut(s) 233, 1839
BstMAI GTCTC 4 cut(s) 395, 549, 2348, 2396
BstMWI GCNNNNNNNGC 6 cut(s) 11, 35, 323, 1465, 1648, 2020
BstNI CCWGG 4 cut(s) 128, 737, 827, 2160
BstSCI CCNGG 5 cut(s) 126, 735, 825, 1001, 2158
BstSFI CTRYAG 2 cut(s) 1116, 1886
BstSLI GKGCMC 1 cut(s) 363
BstV1I GCAGC 5 cut(s) 13, 39, 1468, 1923, 2214
BstV2I GAAGAC 3 cut(s) 1598, 2241, 2430
BstX2I RGATCY 3 cut(s) 112, 731, 808
BstXI CCANNNNNNTGG 1 cut(s) 1493
BstYI RGATCY 3 cut(s) 112, 731, 808
Bsu15I ATCGAT 1 cut(s) 420
BsuI GTATCC 1 cut(s) 1298
BsuRI GGCC 3 cut(s) 198, 886, 1391
BsuTUI ATCGAT 1 cut(s) 420
BtgI CCRYGG 1 cut(s) 266
BtgZI GCGATG 1 cut(s) 2361
BtsCI GGATG 9 cut(s) 166, 393, 523, 599, 835, 998, 1228, 1362, 1941
BtsIMutI CAGTG 5 cut(s) 338, 363, 608, 675, 2418
Cac8I GCNNGC 3 cut(s) 1191, 1195, 2016
CfoI GCGC 2 cut(s) 233, 1839
Cfr13I GGNCC 5 cut(s) 196, 823, 935, 1350, 2133
ClaI ATCGAT 1 cut(s) 420
CseI GACGC 2 cut(s) 58, 1903
Csp6I GTAC 4 cut(s) 298, 350, 707, 740
CspCI CAANNNNNGTGG 4 cut(s) 555, 590, 1953, 1988
CviAII CATG 6 cut(s) 267, 1460, 1870, 1906, 2218, 2272
CviQI GTAC 4 cut(s) 298, 350, 707, 740
DraI TTTAAA 1 cut(s) 97
DriI GACNNNNNGTC 1 cut(s) 1348
EaeI YGGCCR 1 cut(s) 1389
Eam1104I CTCTTC 3 cut(s) 1814, 1874, 1942
Eam1105I GACNNNNNGTC 1 cut(s) 1348
EarI CTCTTC 3 cut(s) 1814, 1874, 1942
EciI GGCGGA 1 cut(s) 2027
Eco130I CCWWGG 2 cut(s) 266, 1218
Eco24I GRGCYC 1 cut(s) 385
Eco32I GATATC 1 cut(s) 1896
Eco47I GGWCC 4 cut(s) 823, 935, 1350, 2133
Eco57I CTGAAG 3 cut(s) 1296, 1838, 2253
EcoO109I RGGNCCY 2 cut(s) 196, 2133
EcoRII CCWGG 4 cut(s) 126, 735, 825, 2158
EcoRV GATATC 1 cut(s) 1896
EcoT14I CCWWGG 2 cut(s) 266, 1218
EcoT22I ATGCAT 2 cut(s) 328, 1653
EcoT38I GRGCYC 1 cut(s) 385
ErhI CCWWGG 2 cut(s) 266, 1218
Esp3I CGTCTC 1 cut(s) 549
FaeI CATG 6 cut(s) 270, 1463, 1873, 1909, 2221, 2275
FalI AAGNNNNNCTT 4 cut(s) 1235, 1267, 1583, 1615
FaqI GGGAC 2 cut(s) 61, 2289
FatI CATG 6 cut(s) 266, 1459, 1869, 1905, 2217, 2271
FauI CCCGC 2 cut(s) 590, 1604
FbaI TGATCA 1 cut(s) 390
Fnu4HI GCNGC 6 cut(s) 12, 27, 53, 1457, 1912, 2228
FokI GGATG 9 cut(s) 153, 400, 530, 606, 842, 985, 1235, 1349, 1928
FriOI GRGCYC 1 cut(s) 385
Fsp4HI GCNGC 6 cut(s) 12, 27, 53, 1457, 1912, 2228
FspBI CTAG 8 cut(s) 32, 200, 1037, 1334, 1397, 1673, 1970, 2181
GlaI GCGC 2 cut(s) 232, 1838
GluI GCNGC 6 cut(s) 12, 27, 53, 1457, 1912, 2228
HaeII RGCGCY 1 cut(s) 234
HaeIII GGCC 3 cut(s) 198, 886, 1391
HapII CCGG 2 cut(s) 729, 1003
HgaI GACGC 2 cut(s) 58, 1903
HhaI GCGC 2 cut(s) 233, 1839
Hin1II CATG 6 cut(s) 270, 1463, 1873, 1909, 2221, 2275
Hin6I GCGC 2 cut(s) 231, 1837
HinP1I GCGC 2 cut(s) 231, 1837
HincII GTYRAC 1 cut(s) 244
HindII GTYRAC 1 cut(s) 244
HindIII AAGCTT 3 cut(s) 866, 1793, 1923
HinfI GANTC 6 cut(s) 131, 845, 851, 979, 1172, 1882
HpaII CCGG 2 cut(s) 729, 1003
HphI GGTGA 7 cut(s) 85, 115, 589, 884, 916, 1556, 2428
Hpy166II GTNNAC 6 cut(s) 148, 244, 300, 350, 361, 2143
Hpy188III TCNNGA 8 cut(s) 842, 860, 912, 1169, 1274, 1499, 2195, 2286
Hpy8I GTNNAC 6 cut(s) 148, 244, 300, 350, 361, 2143
Hpy99I CGWCG 1 cut(s) 1919
HpyAV CCTTC 8 cut(s) 76, 220, 753, 866, 1732, 1860, 2144, 2215
HpyCH4III ACNGT 5 cut(s) 342, 358, 508, 679, 2413
HpyCH4IV ACGT 2 cut(s) 407, 1701
HpyF10VI GCNNNNNNNGC 6 cut(s) 11, 35, 323, 1465, 1648, 2020
HpySE526I ACGT 2 cut(s) 407, 1701
Hsp92II CATG 6 cut(s) 270, 1463, 1873, 1909, 2221, 2275
HspAI GCGC 2 cut(s) 231, 1837
KpnI GGTACC 1 cut(s) 743
Ksp22I TGATCA 1 cut(s) 390
LmnI GCTCC 4 cut(s) 23, 35, 544, 2224
Lsp1109I GCAGC 5 cut(s) 13, 39, 1468, 1923, 2214
LweI GCATC 9 cut(s) 335, 412, 572, 584, 961, 1007, 1204, 1660, 2326
MaeI CTAG 8 cut(s) 32, 200, 1037, 1334, 1397, 1673, 1970, 2181
MaeII ACGT 2 cut(s) 407, 1701
MaeIII GTNAC 8 cut(s) 73, 577, 904, 1399, 1450, 1544, 1750, 2328
MbiI CCGCTC 1 cut(s) 38
MfeI CAATTG 2 cut(s) 762, 2062
MflI RGATCY 3 cut(s) 112, 731, 808
MhlI GDGCHC 2 cut(s) 363, 385
MlsI TGGCCA 1 cut(s) 1391
MluNI TGGCCA 1 cut(s) 1391
MlyI GAGTC 4 cut(s) 125, 845, 973, 1891
MmeI TCCRAC 3 cut(s) 495, 717, 1404
Mox20I TGGCCA 1 cut(s) 1391
Mph1103I ATGCAT 2 cut(s) 328, 1653
MroXI GAANNNNTTC 2 cut(s) 281, 2154
MscI TGGCCA 1 cut(s) 1391
MseI TTAA 6 cut(s) 96, 344, 771, 918, 2169, 2258
MslI CAYNNNNRTG 4 cut(s) 420, 902, 1310, 2411
Msp20I TGGCCA 1 cut(s) 1391
MspA1I CMGCKG 2 cut(s) 238, 2104
MspI CCGG 2 cut(s) 729, 1003
MspR9I CCNGG 5 cut(s) 128, 737, 827, 1003, 2160
MunI CAATTG 2 cut(s) 762, 2062
Mva1269I GAATGC 3 cut(s) 328, 1236, 1253
MvaI CCWGG 4 cut(s) 128, 737, 827, 2160
MwoI GCNNNNNNNGC 6 cut(s) 11, 35, 323, 1465, 1648, 2020
NciI CCSGG 1 cut(s) 1003
NcoI CCATGG 1 cut(s) 266
NlaIII CATG 6 cut(s) 270, 1463, 1873, 1909, 2221, 2275
NlaIV GGNNCC 2 cut(s) 733, 741
NmuCI GTSAC 5 cut(s) 73, 577, 904, 1544, 1750
NsiI ATGCAT 2 cut(s) 328, 1653
NspV TTCGAA 1 cut(s) 80
PctI GAATGC 3 cut(s) 328, 1236, 1253
PdmI GAANNNNTTC 2 cut(s) 281, 2154
PfeI GAWTC 2 cut(s) 845, 1172
PflMI CCANNNNNTGG 1 cut(s) 932
PfoI TCCNGGA 2 cut(s) 825, 1001
PkrI GCNGC 6 cut(s) 13, 28, 54, 1458, 1913, 2229
PleI GAGTC 4 cut(s) 125, 845, 973, 1890
PpsI GAGTC 4 cut(s) 125, 845, 973, 1890
PpuMI RGGWCCY 1 cut(s) 2133
Psp1406I AACGTT 1 cut(s) 407
Psp5II RGGWCCY 1 cut(s) 2133
Psp6I CCWGG 4 cut(s) 126, 735, 825, 2158
PspGI CCWGG 4 cut(s) 126, 735, 825, 2158
PspN4I GGNNCC 2 cut(s) 733, 741
PspPI GGNCC 5 cut(s) 196, 823, 935, 1350, 2133
PspPPI RGGWCCY 1 cut(s) 2133
PstI CTGCAG 1 cut(s) 1890
PsuI RGATCY 3 cut(s) 112, 731, 808
PvuII CAGCTG 2 cut(s) 238, 2104
RsaI GTAC 4 cut(s) 299, 351, 708, 741
RsaNI GTAC 4 cut(s) 298, 350, 707, 740
RseI CAYNNNNRTG 4 cut(s) 420, 902, 1310, 2411
SaqAI TTAA 6 cut(s) 96, 344, 771, 918, 2169, 2258
SatI GCNGC 6 cut(s) 12, 27, 53, 1457, 1912, 2228
Sau96I GGNCC 5 cut(s) 196, 823, 935, 1350, 2133
SchI GAGTC 4 cut(s) 125, 845, 973, 1891
ScrFI CCNGG 5 cut(s) 128, 737, 827, 1003, 2160
SduI GDGCHC 2 cut(s) 363, 385
SfaNI GCATC 9 cut(s) 335, 412, 572, 584, 961, 1007, 1204, 1660, 2326
SfcI CTRYAG 2 cut(s) 1116, 1886
SfuI TTCGAA 1 cut(s) 80
SinI GGWCC 4 cut(s) 823, 935, 1350, 2133
SmiMI CAYNNNNRTG 4 cut(s) 420, 902, 1310, 2411
SmlI CTYRAG 2 cut(s) 1780, 2284
SmoI CTYRAG 2 cut(s) 1780, 2284
SsiI CCGC 8 cut(s) 11, 38, 71, 597, 1142, 1597, 2038, 2079
SspI AATATT 1 cut(s) 430
SspMI CTAG 8 cut(s) 32, 200, 1037, 1334, 1397, 1673, 1970, 2181
StyD4I CCNGG 5 cut(s) 126, 735, 825, 1001, 2158
StyI CCWWGG 2 cut(s) 266, 1218
TaaI ACNGT 5 cut(s) 342, 358, 508, 679, 2413
TaiI ACGT 2 cut(s) 410, 1704
TaqI TCGA 6 cut(s) 80, 420, 721, 1282, 1986, 2165
TaqII GACCGA 1 cut(s) 1907
TatI WGTACW 3 cut(s) 297, 349, 706
TauI GCSGC 1 cut(s) 14
TfiI GAWTC 2 cut(s) 845, 1172
Tru1I TTAA 6 cut(s) 96, 344, 771, 918, 2169, 2258
Tru9I TTAA 6 cut(s) 96, 344, 771, 918, 2169, 2258
TscAI CASTG 5 cut(s) 345, 363, 615, 682, 2418
TseFI GTSAC 5 cut(s) 73, 577, 904, 1544, 1750
TseI GCWGC 5 cut(s) 26, 52, 1456, 1911, 2227
Tsp45I GTSAC 5 cut(s) 73, 577, 904, 1544, 1750
TspDTI ATGAA 7 cut(s) 661, 1239, 1243, 1257, 1455, 1894, 2234
TspGWI ACGGA 1 cut(s) 1843
TspRI CASTG 5 cut(s) 345, 363, 615, 682, 2418
Van91I CCANNNNNTGG 1 cut(s) 932
VneI GTGCAC 1 cut(s) 359
VpaK11BI GGWCC 4 cut(s) 823, 935, 1350, 2133
XapI RAATTY 5 cut(s) 119, 650, 785, 920, 1681
XmnI GAANNNNTTC 2 cut(s) 281, 2154
XspI CTAG 8 cut(s) 32, 200, 1037, 1334, 1397, 1673, 1970, 2181
Zsp2I ATGCAT 2 cut(s) 328, 1653
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.