Rh2AG171100

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0000039
Physical Location & Seq
Forward (+)
16261128 .. 16267081
5954 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG171100.1

Sequence Viewer

Length: 1089 bp
ATGGAAGTGGTTACCACAATTGTAGGGGCTGCTCTAGGAGCAGCGTTCCAGCAGCTCTTTGATAGTGTTATAAAGGCTAACAGAAAAGCTACAATGTTTGATTCCGTCTTCAGGGATCTCGATCTCACGCTCCGGTCTTATCAAGAATTGGTTAAAGATATAGAACAAGTTGAAAATTTTCAACCCTTGCCGGGCCTGCTAGATGATTTAAAAACGAAGATGGAGGAGGGCAGACAGCTTGTTGACAAGTGCTCCAAGTTGAAGATTGATTGCTTCAAAAAGAGAAATGTTGGAAAACTTCGTGCATTGGATGAATCTCTTAACCGACTCTTCCGCATATTGAAATTGCAAGTAGACCACAATCTGAGGAACAGGTTAAGCAATTTGCAGAGGTCGGTGGACCAAATTGATAGGAACCTGGTGGCGCAAAACCGAACTGAAAATCACATTAGAGGTTGGTGCGTGGTACCTAATCCTCCGACATTTACTGTTGGATTGGATGAGCCTTTGAAGGATTTGAAGATGAAGTTTCTAAATGATGATCAAGTGTCAATGCTCGTGCTCACTGCTCCTGGAGGATGCGGGAAAACCACTTTGGCACAGATGTTCTGTCGAGATGAGGAAGTCAAAGAAAAATTCAAGAAGAATATTTTCTTTGTCACTGTTTCGAAAAAGCCCAACTTGGACCGTATTGTAGCAGAAATGTGCCAGAGAACTGGATCCCAAGTACCTGCGTTCCAGAATGAAGCAAATGCACTCTGCTGGCTGCAAGAATTTTTGACAGAAACAGGACAAAATCCTCTACTTTTGGTCTTGGATGATGTTTGGGATGGCTCTTCAGAATCCCTGTTGCTTGATAAGTGTCATGAATTCAAAAATCCAAATTACAAGATTTTGGTGACTTCCAGATTTCAGTTTCAAAGATTTTGTTCTTCATATGAATTAAGTCTACTAAATGATAACGATGCAATGTCCCTTTTTCGTGATACAACATGGTTGGGAGATAGCGAGTCTGTTATCCCAAAAGATCTGGTGACAAAGGTGATTTCTCAATTTGCATATCAAACATATCTGCTTTTTTTTTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
NB-ARC RPW8

Protein Analysis

362

Amino Acids

41.61

Weight (kDa)

6.38

Isoelectric Point (pI)

33.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RPW8 PF05659 7 - 122 7.7e-22 Arabidopsis broad-spectrum mildew resistance protein RPW8
NB-ARC PF00931 170 - 332 2.7e-15 NB-ARC domain
AAA_22 PF13401 184 - 275 2.1e-07 AAA domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 71
Acc36I ACCTGC 1 cut(s) 739
Acc65I GGTACC 1 cut(s) 466
AccB1I GGYRCC 1 cut(s) 466
AccI GTMKAC 2 cut(s) 354, 949
AciI CCGC 2 cut(s) 334, 582
AclWI GGATC 3 cut(s) 123, 714, 727
AcsI RAATTY 4 cut(s) 175, 635, 773, 869
AcuI CTGAAG 2 cut(s) 94, 822
AfaI GTAC 2 cut(s) 468, 729
AfiI CCNNNNNNNGG 2 cut(s) 111, 191
AjnI CCWGG 2 cut(s) 417, 571
AjuI GAANNNNNNNTTGG 2 cut(s) 578, 610
AluBI AGCT 3 cut(s) 55, 89, 238
AluI AGCT 3 cut(s) 55, 89, 238
Alw21I GWGCWC 2 cut(s) 254, 564
AlwI GGATC 3 cut(s) 123, 714, 727
AoxI GGCC 1 cut(s) 193
ApeKI GCWGC 4 cut(s) 29, 41, 52, 766
ApoI RAATTY 4 cut(s) 175, 635, 773, 869
Asp700I GAANNNNTTC 2 cut(s) 177, 650
Asp718I GGTACC 1 cut(s) 466
AspLEI GCGC 1 cut(s) 427
AspS9I GGNCC 3 cut(s) 193, 400, 685
AsuC2I CCSGG 1 cut(s) 192
AsuHPI GGTGA 3 cut(s) 910, 1045, 1054
AsuII TTCGAA 1 cut(s) 668
AvaII GGWCC 2 cut(s) 400, 685
BamHI GGATCC 1 cut(s) 719
BanI GGYRCC 1 cut(s) 466
BauI CACGAG 1 cut(s) 557
BbsI GAAGAC 1 cut(s) 100
Bbv12I GWGCWC 2 cut(s) 254, 564
BbvI GCAGC 4 cut(s) 16, 53, 64, 753
BccI CCATC 2 cut(s) 214, 824
BciT130I CCWGG 2 cut(s) 419, 573
BclI TGATCA 1 cut(s) 541
BcnI CCSGG 1 cut(s) 192
BfaI CTAG 2 cut(s) 35, 200
BfuAI ACCTGC 1 cut(s) 739
BglII AGATCT 1 cut(s) 1027
BisI GCNGC 4 cut(s) 30, 42, 53, 767
BlsI GCNGC 4 cut(s) 31, 43, 54, 768
Bme1390I CCNGG 3 cut(s) 192, 419, 573
Bme18I GGWCC 2 cut(s) 400, 685
BmgT120I GGNCC 3 cut(s) 193, 400, 685
BmiI GGNNCC 3 cut(s) 416, 468, 721
BmrFI CCNGG 3 cut(s) 192, 419, 573
BmsI GCATC 2 cut(s) 569, 955
BpiI GAAGAC 1 cut(s) 100
BpmI CTGGAG 1 cut(s) 594
Bpu14I TTCGAA 1 cut(s) 668
BpuMI CCSGG 1 cut(s) 192
BsaBI GATNNNNATC 1 cut(s) 120
BsaWI WCCGGW 1 cut(s) 132
BsaXI ACNNNNNCTCC 2 cut(s) 236, 266
Bsc4I CCNNNNNNNGG 2 cut(s) 111, 191
Bse1I ACTGG 1 cut(s) 721
Bse3DI GCAATG 1 cut(s) 975
Bse8I GATNNNNATC 1 cut(s) 120
BseBI CCWGG 2 cut(s) 419, 573
BseGI GGATG 5 cut(s) 316, 505, 584, 823, 835
BseJI GATNNNNATC 1 cut(s) 120
BseLI CCNNNNNNNGG 2 cut(s) 111, 191
BseMI GCAATG 1 cut(s) 975
BseMII CTCAG 1 cut(s) 356
BseNI ACTGG 1 cut(s) 721
BseRI GAGGAG 1 cut(s) 239
BseXI GCAGC 4 cut(s) 16, 53, 64, 753
BshFI GGCC 1 cut(s) 195
BshNI GGYRCC 1 cut(s) 466
BsiHKAI GWGCWC 2 cut(s) 254, 564
BsiSI CCGG 2 cut(s) 133, 191
BslFI GGGAC 1 cut(s) 958
BslI CCNNNNNNNGG 2 cut(s) 111, 191
BsmFI GGGAC 1 cut(s) 958
BsnI GGCC 1 cut(s) 195
Bsp119I TTCGAA 1 cut(s) 668
Bsp1286I GDGCHC 2 cut(s) 254, 564
Bsp143I GATC 5 cut(s) 115, 121, 541, 719, 1027
BspACI CCGC 2 cut(s) 334, 582
BspANI GGCC 1 cut(s) 195
BspCNI CTCAG 1 cut(s) 357
BspHI TCATGA 1 cut(s) 865
BspLI GGNNCC 3 cut(s) 416, 468, 721
BspMI ACCTGC 1 cut(s) 739
BspPI GGATC 3 cut(s) 123, 714, 727
BspQI GCTCTTC 1 cut(s) 841
BspT104I TTCGAA 1 cut(s) 668
BspT107I GGYRCC 1 cut(s) 466
BsrDI GCAATG 1 cut(s) 975
BsrI ACTGG 1 cut(s) 721
BssMI GATC 5 cut(s) 115, 121, 541, 719, 1027
BssSI CACGAG 1 cut(s) 557
Bst2BI CACGAG 1 cut(s) 557
Bst2UI CCWGG 2 cut(s) 419, 573
Bst4CI ACNGT 3 cut(s) 490, 664, 689
Bst6I CTCTTC 2 cut(s) 335, 841
BstBI TTCGAA 1 cut(s) 668
BstC8I GCNNGC 2 cut(s) 197, 764
BstDEI CTNAG 1 cut(s) 365
BstEII GGTNACC 1 cut(s) 10
BstF5I GGATG 5 cut(s) 316, 505, 584, 823, 835
BstHHI GCGC 1 cut(s) 427
BstKTI GATC 5 cut(s) 118, 124, 544, 722, 1030
BstMBI GATC 5 cut(s) 115, 121, 541, 719, 1027
BstMWI GCNNNNNNNGC 2 cut(s) 38, 196
BstNI CCWGG 2 cut(s) 419, 573
BstPI GGTNACC 1 cut(s) 10
BstSCI CCNGG 3 cut(s) 190, 417, 571
BstV1I GCAGC 4 cut(s) 16, 53, 64, 753
BstV2I GAAGAC 1 cut(s) 100
BstX2I RGATCY 3 cut(s) 115, 719, 1027
BstXI CCANNNNNNTGG 1 cut(s) 716
BstYI RGATCY 3 cut(s) 115, 719, 1027
BsuRI GGCC 1 cut(s) 195
BtsCI GGATG 5 cut(s) 316, 505, 584, 823, 835
BtsI GCAGTG 1 cut(s) 564
BtsIMutI CAGTG 2 cut(s) 564, 660
BveI ACCTGC 1 cut(s) 739
Cac8I GCNNGC 2 cut(s) 197, 764
CciI TCATGA 1 cut(s) 865
CfoI GCGC 1 cut(s) 427
Cfr13I GGNCC 3 cut(s) 193, 400, 685
CsiI ACCWGGT 1 cut(s) 417
Csp6I GTAC 2 cut(s) 467, 728
CviAII CATG 2 cut(s) 866, 993
CviQI GTAC 2 cut(s) 467, 728
DdeI CTNAG 1 cut(s) 365
DpnI GATC 5 cut(s) 117, 123, 543, 721, 1029
DpnII GATC 5 cut(s) 115, 121, 541, 719, 1027
DraI TTTAAA 1 cut(s) 210
Eam1104I CTCTTC 2 cut(s) 335, 841
EarI CTCTTC 2 cut(s) 335, 841
Eco47I GGWCC 2 cut(s) 400, 685
Eco57I CTGAAG 2 cut(s) 94, 822
Eco91I GGTNACC 1 cut(s) 10
EcoO65I GGTNACC 1 cut(s) 10
EcoRI GAATTC 1 cut(s) 869
EcoRII CCWGG 2 cut(s) 417, 571
FaeI CATG 2 cut(s) 869, 996
FaiI YATR 9 cut(s) 71, 161, 338, 867, 937, 939, 994, 1060, 1069
FalI AAGNNNNNCTT 2 cut(s) 665, 697
FaqI GGGAC 1 cut(s) 958
FatI CATG 2 cut(s) 865, 992
FauI CCCGC 1 cut(s) 575
FauNDI CATATG 1 cut(s) 937
FbaI TGATCA 1 cut(s) 541
FblI GTMKAC 2 cut(s) 354, 949
Fnu4HI GCNGC 4 cut(s) 30, 42, 53, 767
FokI GGATG 5 cut(s) 323, 512, 591, 830, 842
Fsp4HI GCNGC 4 cut(s) 30, 42, 53, 767
FspBI CTAG 2 cut(s) 35, 200
GlaI GCGC 1 cut(s) 426
GluI GCNGC 4 cut(s) 30, 42, 53, 767
GsuI CTGGAG 1 cut(s) 594
HaeIII GGCC 1 cut(s) 195
HapII CCGG 2 cut(s) 133, 191
HhaI GCGC 1 cut(s) 427
Hin1II CATG 2 cut(s) 869, 996
Hin6I GCGC 1 cut(s) 425
HinP1I GCGC 1 cut(s) 425
HincII GTYRAC 1 cut(s) 244
HindII GTYRAC 1 cut(s) 244
HinfI GANTC 5 cut(s) 101, 314, 327, 842, 1010
HpaII CCGG 2 cut(s) 133, 191
HphI GGTGA 3 cut(s) 910, 1045, 1054
Hpy166II GTNNAC 4 cut(s) 244, 355, 400, 950
Hpy188I TCNGA 3 cut(s) 366, 480, 841
Hpy188III TCNNGA 8 cut(s) 119, 143, 614, 640, 739, 866, 906, 983
Hpy8I GTNNAC 4 cut(s) 244, 355, 400, 950
HpyAV CCTTC 1 cut(s) 505
HpyCH4III ACNGT 3 cut(s) 490, 664, 689
HpyCH4V TGCA 7 cut(s) 305, 349, 388, 755, 769, 968, 1058
HpyF10VI GCNNNNNNNGC 2 cut(s) 38, 196
HpyF3I CTNAG 1 cut(s) 365
Hsp92II CATG 2 cut(s) 869, 996
HspAI GCGC 1 cut(s) 425
KpnI GGTACC 1 cut(s) 470
Ksp22I TGATCA 1 cut(s) 541
Kzo9I GATC 5 cut(s) 115, 121, 541, 719, 1027
LguI GCTCTTC 1 cut(s) 841
LmnI GCTCC 4 cut(s) 38, 135, 257, 574
Lsp1109I GCAGC 4 cut(s) 16, 53, 64, 753
LweI GCATC 2 cut(s) 569, 955
MabI ACCWGGT 1 cut(s) 417
MaeI CTAG 2 cut(s) 35, 200
MaeIII GTNAC 4 cut(s) 10, 658, 898, 1033
MalI GATC 5 cut(s) 117, 123, 543, 721, 1029
MboI GATC 5 cut(s) 115, 121, 541, 719, 1027
MboII GAAGA 8 cut(s) 100, 229, 274, 322, 532, 655, 828, 924
MfeI CAATTG 1 cut(s) 18
MflI RGATCY 3 cut(s) 115, 719, 1027
MhlI GDGCHC 2 cut(s) 254, 564
MlyI GAGTC 2 cut(s) 321, 1019
MmeI TCCRAC 3 cut(s) 271, 472, 503
MnlI CCTC 9 cut(s) 217, 220, 360, 384, 446, 486, 569, 613, 810
MroXI GAANNNNTTC 2 cut(s) 177, 650
MseI TTAA 5 cut(s) 153, 209, 321, 377, 944
MspI CCGG 2 cut(s) 133, 191
MspR9I CCNGG 3 cut(s) 192, 419, 573
MunI CAATTG 1 cut(s) 18
MvaI CCWGG 2 cut(s) 419, 573
MwoI GCNNNNNNNGC 2 cut(s) 38, 196
NciI CCSGG 1 cut(s) 192
NdeI CATATG 1 cut(s) 937
NdeII GATC 5 cut(s) 115, 121, 541, 719, 1027
NlaIII CATG 2 cut(s) 869, 996
NlaIV GGNNCC 3 cut(s) 416, 468, 721
NmuCI GTSAC 3 cut(s) 658, 898, 1033
NspV TTCGAA 1 cut(s) 668
PagI TCATGA 1 cut(s) 865
PciSI GCTCTTC 1 cut(s) 841
PdmI GAANNNNTTC 2 cut(s) 177, 650
PfeI GAWTC 3 cut(s) 101, 314, 842
PfoI TCCNGGA 1 cut(s) 571
PkrI GCNGC 4 cut(s) 31, 43, 54, 768
PleI GAGTC 2 cut(s) 321, 1018
PpsI GAGTC 2 cut(s) 321, 1018
PsiI TTATAA 1 cut(s) 71
Psp6I CCWGG 2 cut(s) 417, 571
PspEI GGTNACC 1 cut(s) 10
PspGI CCWGG 2 cut(s) 417, 571
PspN4I GGNNCC 3 cut(s) 416, 468, 721
PspPI GGNCC 3 cut(s) 193, 400, 685
PsuI RGATCY 3 cut(s) 115, 719, 1027
RsaI GTAC 2 cut(s) 468, 729
RsaNI GTAC 2 cut(s) 467, 728
SapI GCTCTTC 1 cut(s) 841
SaqAI TTAA 5 cut(s) 153, 209, 321, 377, 944
SatI GCNGC 4 cut(s) 30, 42, 53, 767
Sau3AI GATC 5 cut(s) 115, 121, 541, 719, 1027
Sau96I GGNCC 3 cut(s) 193, 400, 685
SchI GAGTC 2 cut(s) 321, 1019
ScrFI CCNGG 3 cut(s) 192, 419, 573
SduI GDGCHC 2 cut(s) 254, 564
SexAI ACCWGGT 1 cut(s) 417
SfaNI GCATC 2 cut(s) 569, 955
SfuI TTCGAA 1 cut(s) 668
SinI GGWCC 2 cut(s) 400, 685
SsiI CCGC 2 cut(s) 334, 582
SspI AATATT 1 cut(s) 649
SspMI CTAG 2 cut(s) 35, 200
StyD4I CCNGG 3 cut(s) 190, 417, 571
TaaI ACNGT 3 cut(s) 490, 664, 689
TaqI TCGA 3 cut(s) 120, 613, 668
TfiI GAWTC 3 cut(s) 101, 314, 842
Tru1I TTAA 5 cut(s) 153, 209, 321, 377, 944
Tru9I TTAA 5 cut(s) 153, 209, 321, 377, 944
TscAI CASTG 2 cut(s) 571, 667
TseFI GTSAC 3 cut(s) 658, 898, 1033
TseI GCWGC 4 cut(s) 29, 41, 52, 766
Tsp45I GTSAC 3 cut(s) 658, 898, 1033
TspDTI ATGAA 6 cut(s) 327, 539, 759, 882, 924, 954
TspGWI ACGGA 1 cut(s) 94
TspRI CASTG 2 cut(s) 571, 667
VpaK11BI GGWCC 2 cut(s) 400, 685
XapI RAATTY 4 cut(s) 175, 635, 773, 869
XmiI GTMKAC 2 cut(s) 354, 949
XmnI GAANNNNTTC 2 cut(s) 177, 650
XspI CTAG 2 cut(s) 35, 200
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.