Rmu_sc0003660.1_g000001

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003660.1
OG0000039
Physical Location & Seq
Reverse (-)
2049 .. 5388
3340 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003660.1_g000001.1.cds

Sequence Viewer

Length: 2589 bp
atggtcgtagatgttgctgcatctgctgtaggactagcattatcgctgctgtgtaaggccattgaggaagttatcagaaagtgcgtgatcgacaagattgtggagttcaatcccctgctcaagaagatcaataccaagctgaagacagtgaagccagggatagaagagatcgagaaaagcaatctagaattggatcgcacaggtgaattgaaagatttcaaacaagtaatcgaggatatcacagcgcttgttcgtaagttacaagaggttccccattggtacaagaaacctaaatacaccgacaaactcaaagaactcaatgaatctctggatacacagataatgttactgcaggtgccgacagcaagtaaggtctctaacctttcggttataacaagtattatcgagggggacaccagaaatatccgtatgcaaatggggaatatgagtgtgcaagtggggagtatgagtatgcaaatggagaatatgggtatgcaaatagaggatttgaatacgaaccttgagatgatcagggatatgcgacagaatggcctagtgcaaaatcaagttaaaggttgttggtctggagtacctgaaccgccatcatttacagttggattggatttacgtttggatgaattgaagaagaaacttcttgaggatggggtgtcaatgggtctggtcactggtcatccaggctctgggaaaaccactttggcaaaagctctttgtcaagataagaaagtgaaagacaaattcaagggcatcatctttgtcgacgtttcaaaaagacgcaacactgaggttgtgcaggaaatatgtgaaaaaaagggtacccaaatactttctttccaatccgaagaaattgcacttgacaggctgcaacaacttctgaataacacagaagaagatcctgtgcttttggtcctggataacgtttggcccggaaacaggacagaatccctcctggcgagctttaagttcaaagaatcggaaatgtcaaattacaagattttggtgacatcaagatatatgttgccaggatttgatgttgaataccacgtagaagaattgaatgacaatgatgcaatgagtcttctccgtaattcagcacgcctcacaagttcttcttctattccagaagatcttcagagacaggttgtggagtgctgtaagagacttccactggctattgaagtggtcggaagatcacttttcggcaagaatattgtgatctggaaagatagagtagaagcatggtctagcggttcttctgtcattaagtctgaaaaacatttgcttgtttgcctccaaagtagtttagatgccctgggtgaagaaaatgccctcatcaaggaatgtttcatggaccttgcttcatttcctcaaggccgaaggattcctgcttctgtcctgattgatatctggagtgtcctcattgatatgtgggctgcggataaagatagttcatgtgttgcaaaactctacgagctcacctactggaggctggctaatcttgtaatcacgaggaatgagaagggggaggtggatgactactatggtgaccacttcgttacccaacatgatctccttagagagctggctgtccaccagacagatgagggccctgtaaaactgaggagaagactgattataaacatacgtggaaacaaacttcctaaatggtggaaaaaacagatggatcagcccttcgaagaagttctcctagtatctatttcaactgatagtctcttctcatcaaaatggcgcgacatacagctaccgaaagctaaagttctagttctgaatttccacacaaagaactatgcattgcccgaatttgtgaagaaaatggagaaattgaaggttctaatagtcacaaattatgggttcttaccggctgaagtgagtaattttacattgctgggttcttcatctaaactaaagaggataagattagagcggatttctctttcttccattaccaagaaccccatagtattgaagagactacagaagatatctttcttcatgtgtaacatggggcaagcttttagcaaaggttccatcaaattttttgaggcattcccagaccttcaagaaatcaacattgactattgcagtgatttggtggaattacctgctgacatctgttttctaatccatctgaaaaagctcagcatcaccaactgtcataagctatctgccttgcctgaaatgattggagagctagtcaatttagaagttttgaggttaaggtcctgcacagacttgtccgagctgccaagttcagttaggaaactcaaaaaactaaaggttcttgacatatccaattgctacagcattaaggagttgcctgaacacattggtgaaatgtgctgcttacaaaagctcaacatgaggcagtgctcgagaatccaagagctgcctgaatcaattttggatcttgaaacgttgactgatgtgatatgtgatgaagagacaaaattgttttgggaaacttactcgccctgtctcagcaaccacatacagataacggcggtcaaagaggaaatcaacctagattggctttatatgcgtcactcttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
NB-ARC RPW8

Protein Analysis

862

Amino Acids

98.29

Weight (kDa)

6.56

Isoelectric Point (pI)

44.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 392, 1655
AarI CACCTGC 1 cut(s) 343
Acc36I ACCTGC 2 cut(s) 343, 2149
Acc65I GGTACC 1 cut(s) 833
AccB1I GGYRCC 2 cut(s) 355, 833
AccB7I CCANNNNNTGG 1 cut(s) 701
AccBSI CCGCTC 1 cut(s) 1963
AccI GTMKAC 1 cut(s) 777
AccII CGCG 1 cut(s) 1770
AciI CCGC 5 cut(s) 599, 1266, 1454, 1963, 2540
AclI AACGTT 2 cut(s) 936, 2453
AclWI GGATC 4 cut(s) 201, 905, 1710, 2451
AcsI RAATTY 4 cut(s) 755, 1807, 1838, 2072
AcuI CTGAAG 3 cut(s) 161, 1133, 1923
AfaI GTAC 3 cut(s) 281, 591, 835
AfeI AGCGCT 1 cut(s) 246
AfiI CCNNNNNNNGG 4 cut(s) 701, 951, 1354, 1503
AjnI CCWGG 6 cut(s) 154, 694, 927, 966, 1039, 1329
AjuI GAANNNNNNNTTGG 2 cut(s) 698, 730
AleI CACNNNNGTG 1 cut(s) 2367
Alw21I GWGCWC 2 cut(s) 1494, 2411
Alw26I GTCTC 7 cut(s) 379, 1147, 1171, 1754, 2002, 2474, 2519
AlwI GGATC 4 cut(s) 201, 905, 1710, 2451
AlwNI CAGNNNCTG 1 cut(s) 701
Ama87I CYCGRG 1 cut(s) 2410
Aor51HI AGCGCT 1 cut(s) 246
AoxI GGCC 5 cut(s) 57, 550, 941, 1390, 1624
ApaI GGGCCC 1 cut(s) 1628
ApeKI GCWGC 7 cut(s) 17, 46, 880, 1451, 2281, 2379, 2425
ApoI RAATTY 4 cut(s) 755, 1807, 1838, 2072
Asp700I GAANNNNTTC 3 cut(s) 215, 1146, 1719
Asp718I GGTACC 1 cut(s) 833
AspLEI GCGC 2 cut(s) 247, 1770
AspS9I GGNCC 6 cut(s) 925, 942, 1369, 1624, 1625, 2259
AsuC2I CCSGG 1 cut(s) 945
AsuHPI GGTGA 7 cut(s) 215, 1030, 1346, 1486, 1574, 2176, 2381
AsuII TTCGAA 1 cut(s) 1713
AvaI CYCGRG 1 cut(s) 2410
AvaII GGWCC 3 cut(s) 925, 1369, 2259
BaeGI GKGCMC 1 cut(s) 1628
BanI GGYRCC 2 cut(s) 355, 833
BanII GRGCYC 2 cut(s) 1494, 1628
BauI CACGAG 1 cut(s) 1525
BbsI GAAGAC 3 cut(s) 149, 1088, 1651
Bbv12I GWGCWC 2 cut(s) 1494, 2411
BbvI GCAGC 7 cut(s) 4, 33, 867, 1438, 2268, 2366, 2412
BccI CCATC 5 cut(s) 610, 656, 1693, 2075, 2172
BceAI ACGGC 1 cut(s) 2553
BcgI CGANNNNNNTGC 2 cut(s) 848, 882
BciT130I CCWGG 6 cut(s) 156, 696, 929, 968, 1041, 1331
BciVI GTATCC 1 cut(s) 325
BclI TGATCA 1 cut(s) 528
BcnI CCSGG 1 cut(s) 945
BcoDI GTCTC 7 cut(s) 379, 1147, 1171, 1754, 2002, 2474, 2519
BfaI CTAG 8 cut(s) 35, 185, 554, 1263, 1727, 1799, 2231, 2561
BfmI CTRYAG 4 cut(s) 27, 350, 2012, 2338
BfoI RGCGCY 1 cut(s) 248
BfuAI ACCTGC 2 cut(s) 343, 2149
BfuI GTATCC 1 cut(s) 325
BglII AGATCT 1 cut(s) 1144
BisI GCNGC 7 cut(s) 18, 47, 881, 1452, 2282, 2380, 2426
BlpI GCTNAGC 1 cut(s) 2177
BlsI GCNGC 7 cut(s) 19, 48, 882, 1453, 2283, 2381, 2427
Bme1390I CCNGG 7 cut(s) 156, 696, 929, 945, 968, 1041, 1331
Bme18I GGWCC 3 cut(s) 925, 1369, 2259
BmeT110I CYCGRG 1 cut(s) 2410
BmgT120I GGNCC 6 cut(s) 925, 942, 1369, 1624, 1625, 2259
BmiI GGNNCC 5 cut(s) 270, 357, 835, 1626, 2065
BmrFI CCNGG 7 cut(s) 156, 696, 929, 945, 968, 1041, 1331
BmsI GCATC 5 cut(s) 29, 774, 1075, 1315, 2190
BpiI GAAGAC 3 cut(s) 149, 1088, 1651
BpmI CTGGAG 3 cut(s) 606, 1447, 1522
Bpu1102I GCTNAGC 1 cut(s) 2177
Bpu14I TTCGAA 1 cut(s) 1713
BpuEI CTTGAG 4 cut(s) 104, 542, 677, 1371
BpuMI CCSGG 1 cut(s) 945
BsaAI YACGTR 2 cut(s) 1063, 1664
BsaBI GATNNNNATC 1 cut(s) 1421
BsaI GGTCTC 1 cut(s) 379
BsaJI CCNNGG 3 cut(s) 155, 1329, 1330
BsaXI ACNNNNNCTCC 6 cut(s) 454, 484, 1572, 1602, 2217, 2247
Bsc4I CCNNNNNNNGG 4 cut(s) 701, 951, 1354, 1503
Bse118I RCCGGY 1 cut(s) 1897
Bse1I ACTGG 3 cut(s) 691, 1191, 1505
Bse3DI GCAATG 3 cut(s) 1095, 1829, 1919
Bse8I GATNNNNATC 1 cut(s) 1421
BseBI CCWGG 6 cut(s) 156, 696, 929, 968, 1041, 1331
BseDI CCNNGG 3 cut(s) 155, 1329, 1330
BseGI GGATG 4 cut(s) 640, 667, 691, 1555
BseJI GATNNNNATC 1 cut(s) 1421
BseLI CCNNNNNNNGG 4 cut(s) 701, 951, 1354, 1503
BseMI GCAATG 3 cut(s) 1095, 1829, 1919
BseMII CTCAG 4 cut(s) 792, 1628, 2191, 2530
BseNI ACTGG 3 cut(s) 691, 1191, 1505
BseRI GAGGAG 1 cut(s) 1654
BseSI GKGCMC 1 cut(s) 1628
BseXI GCAGC 7 cut(s) 4, 33, 867, 1438, 2268, 2366, 2412
BseYI CCCAGC 1 cut(s) 1924
BsgI GTGCAG 2 cut(s) 830, 2248
Bsh1236I CGCG 1 cut(s) 1770
BshFI GGCC 5 cut(s) 59, 552, 943, 1392, 1626
BshNI GGYRCC 2 cut(s) 355, 833
BsiHKAI GWGCWC 2 cut(s) 1494, 2411
BsiHKCI CYCGRG 1 cut(s) 2410
BsiSI CCGG 2 cut(s) 945, 1898
BslFI GGGAC 1 cut(s) 425
BslI CCNNNNNNNGG 4 cut(s) 701, 951, 1354, 1503
BsmAI GTCTC 7 cut(s) 379, 1147, 1171, 1754, 2002, 2474, 2519
BsmFI GGGAC 1 cut(s) 425
BsmI GAATGC 1 cut(s) 2084
BsnI GGCC 5 cut(s) 59, 552, 943, 1392, 1626
Bso31I GGTCTC 1 cut(s) 379
BsoBI CYCGRG 1 cut(s) 2410
Bsp119I TTCGAA 1 cut(s) 1713
Bsp120I GGGCCC 1 cut(s) 1624
Bsp1286I GDGCHC 3 cut(s) 1494, 1628, 2411
Bsp1720I GCTNAGC 1 cut(s) 2177
BspACI CCGC 5 cut(s) 599, 1266, 1454, 1963, 2540
BspANI GGCC 5 cut(s) 59, 552, 943, 1392, 1626
BspCNI CTCAG 4 cut(s) 793, 1629, 2190, 2529
BspFNI CGCG 1 cut(s) 1770
BspLI GGNNCC 5 cut(s) 270, 357, 835, 1626, 2065
BspMAI CTGCAG 1 cut(s) 354
BspMI ACCTGC 2 cut(s) 343, 2149
BspPI GGATC 4 cut(s) 201, 905, 1710, 2451
BspT104I TTCGAA 1 cut(s) 1713
BspT107I GGYRCC 2 cut(s) 355, 833
BspTNI GGTCTC 1 cut(s) 379
BsrBI CCGCTC 1 cut(s) 1963
BsrDI GCAATG 3 cut(s) 1095, 1829, 1919
BsrFI RCCGGY 1 cut(s) 1897
BsrI ACTGG 3 cut(s) 691, 1191, 1505
BssAI RCCGGY 1 cut(s) 1897
BssECI CCNNGG 3 cut(s) 155, 1329, 1330
BssSI CACGAG 1 cut(s) 1525
Bst2BI CACGAG 1 cut(s) 1525
Bst2UI CCWGG 6 cut(s) 156, 696, 929, 968, 1041, 1331
Bst4CI ACNGT 3 cut(s) 148, 613, 2192
Bst6I CTCTTC 4 cut(s) 159, 1757, 2000, 2472
BstBAI YACGTR 2 cut(s) 1063, 1664
BstBI TTCGAA 1 cut(s) 1713
BstC8I GCNNGC 5 cut(s) 973, 1114, 1509, 1602, 2049
BstDEI CTNAG 5 cut(s) 801, 1592, 1637, 2177, 2516
BstEII GGTNACC 1 cut(s) 1562
BstENI CCTNNNNNAGG 2 cut(s) 1352, 1501
BstF5I GGATG 4 cut(s) 640, 667, 691, 1555
BstFNI CGCG 1 cut(s) 1770
BstH2I RGCGCY 1 cut(s) 248
BstHHI GCGC 2 cut(s) 247, 1770
BstMAI GTCTC 7 cut(s) 379, 1147, 1171, 1754, 2002, 2474, 2519
BstMWI GCNNNNNNNGC 2 cut(s) 23, 2575
BstNI CCWGG 6 cut(s) 156, 696, 929, 968, 1041, 1331
BstPI GGTNACC 1 cut(s) 1562
BstSCI CCNGG 7 cut(s) 154, 694, 927, 943, 966, 1039, 1329
BstSFI CTRYAG 4 cut(s) 27, 350, 2012, 2338
BstSLI GKGCMC 1 cut(s) 1628
BstUI CGCG 1 cut(s) 1770
BstV1I GCAGC 7 cut(s) 4, 33, 867, 1438, 2268, 2366, 2412
BstV2I GAAGAC 3 cut(s) 149, 1088, 1651
BstX2I RGATCY 3 cut(s) 910, 1144, 2443
BstYI RGATCY 3 cut(s) 910, 1144, 2443
BsuI GTATCC 1 cut(s) 325
BsuRI GGCC 5 cut(s) 59, 552, 943, 1392, 1626
BtsCI GGATG 4 cut(s) 640, 667, 691, 1555
BtsI GCAGTG 2 cut(s) 2128, 2411
BtsIMutI CAGTG 6 cut(s) 153, 684, 798, 1184, 2128, 2411
BveI ACCTGC 2 cut(s) 343, 2149
Cac8I GCNNGC 5 cut(s) 973, 1114, 1509, 1602, 2049
CaiI CAGNNNCTG 1 cut(s) 701
CfoI GCGC 2 cut(s) 247, 1770
Cfr10I RCCGGY 1 cut(s) 1897
Cfr13I GGNCC 6 cut(s) 925, 942, 1369, 1624, 1625, 2259
CseI GACGC 2 cut(s) 801, 2567
Csp6I GTAC 3 cut(s) 280, 590, 834
CviAII CATG 7 cut(s) 1257, 1366, 1470, 1583, 2032, 2041, 2398
CviQI GTAC 3 cut(s) 280, 590, 834
DdeI CTNAG 5 cut(s) 801, 1592, 1637, 2177, 2516
Eam1104I CTCTTC 4 cut(s) 159, 1757, 2000, 2472
EarI CTCTTC 4 cut(s) 159, 1757, 2000, 2472
Ecl136II GAGCTC 1 cut(s) 1492
Eco24I GRGCYC 2 cut(s) 1494, 1628
Eco31I GGTCTC 1 cut(s) 379
Eco32I GATATC 3 cut(s) 238, 1423, 2022
Eco47I GGWCC 3 cut(s) 925, 1369, 2259
Eco47III AGCGCT 1 cut(s) 246
Eco53kI GAGCTC 1 cut(s) 1492
Eco57I CTGAAG 3 cut(s) 161, 1133, 1923
Eco88I CYCGRG 1 cut(s) 2410
Eco91I GGTNACC 1 cut(s) 1562
EcoICRI GAGCTC 1 cut(s) 1492
EcoNI CCTNNNNNAGG 2 cut(s) 1352, 1501
EcoO109I RGGNCCY 3 cut(s) 1624, 1625, 2259
EcoO65I GGTNACC 1 cut(s) 1562
EcoRII CCWGG 6 cut(s) 154, 694, 927, 966, 1039, 1329
EcoRV GATATC 3 cut(s) 238, 1423, 2022
EcoT22I ATGCAT 1 cut(s) 1831
EcoT38I GRGCYC 2 cut(s) 1494, 1628
FaeI CATG 7 cut(s) 1260, 1369, 1473, 1586, 2035, 2044, 2401
FalI AAGNNNNNCTT 2 cut(s) 1114, 1146
FaqI GGGAC 1 cut(s) 425
FatI CATG 7 cut(s) 1256, 1365, 1469, 1582, 2031, 2040, 2397
FbaI TGATCA 1 cut(s) 528
FblI GTMKAC 1 cut(s) 777
Fnu4HI GCNGC 7 cut(s) 18, 47, 881, 1452, 2282, 2380, 2426
FokI GGATG 4 cut(s) 647, 674, 678, 1562
FriOI GRGCYC 2 cut(s) 1494, 1628
Fsp4HI GCNGC 7 cut(s) 18, 47, 881, 1452, 2282, 2380, 2426
FspBI CTAG 8 cut(s) 35, 185, 554, 1263, 1727, 1799, 2231, 2561
GlaI GCGC 2 cut(s) 246, 1769
GluI GCNGC 7 cut(s) 18, 47, 881, 1452, 2282, 2380, 2426
GsaI CCCAGC 1 cut(s) 1928
GsuI CTGGAG 3 cut(s) 606, 1447, 1522
HaeII RGCGCY 1 cut(s) 248
HaeIII GGCC 5 cut(s) 59, 552, 943, 1392, 1626
HapII CCGG 2 cut(s) 945, 1898
HgaI GACGC 2 cut(s) 801, 2567
HhaI GCGC 2 cut(s) 247, 1770
Hin1II CATG 7 cut(s) 1260, 1369, 1473, 1586, 2035, 2044, 2401
Hin6I GCGC 2 cut(s) 245, 1768
HinP1I GCGC 2 cut(s) 245, 1768
HincII GTYRAC 2 cut(s) 778, 2457
HindII GTYRAC 2 cut(s) 778, 2457
HindIII AAGCTT 1 cut(s) 2049
HinfI GANTC 7 cut(s) 323, 959, 989, 1093, 1399, 2415, 2432
HpaII CCGG 2 cut(s) 945, 1898
HphI GGTGA 7 cut(s) 215, 1030, 1346, 1486, 1574, 2176, 2381
Hpy166II GTNNAC 3 cut(s) 778, 1609, 2457
Hpy8I GTNNAC 3 cut(s) 778, 1609, 2457
Hpy99I CGWCG 1 cut(s) 782
HpyAV CCTTC 5 cut(s) 1389, 1531, 1720, 1858, 2105
HpyCH4III ACNGT 3 cut(s) 148, 613, 2192
HpyCH4IV ACGT 6 cut(s) 628, 780, 936, 1062, 1663, 2453
HpyF10VI GCNNNNNNNGC 2 cut(s) 23, 2575
HpyF3I CTNAG 5 cut(s) 801, 1592, 1637, 2177, 2516
HpySE526I ACGT 6 cut(s) 628, 780, 936, 1062, 1663, 2453
Hsp92II CATG 7 cut(s) 1260, 1369, 1473, 1586, 2035, 2044, 2401
HspAI GCGC 2 cut(s) 245, 1768
KpnI GGTACC 1 cut(s) 837
Ksp22I TGATCA 1 cut(s) 528
Lsp1109I GCAGC 7 cut(s) 4, 33, 867, 1438, 2268, 2366, 2412
LweI GCATC 5 cut(s) 29, 774, 1075, 1315, 2190
MaeI CTAG 8 cut(s) 35, 185, 554, 1263, 1727, 1799, 2231, 2561
MaeII ACGT 6 cut(s) 628, 780, 936, 1062, 1663, 2453
MaeIII GTNAC 9 cut(s) 258, 345, 682, 1018, 1562, 1573, 1876, 2036, 2579
MbiI CCGCTC 1 cut(s) 1963
MfeI CAATTG 1 cut(s) 2332
MflI RGATCY 3 cut(s) 910, 1144, 2443
MhlI GDGCHC 3 cut(s) 1494, 1628, 2411
MlyI GAGTC 1 cut(s) 1102
MmeI TCCRAC 2 cut(s) 595, 1183
Mph1103I ATGCAT 1 cut(s) 1831
MroXI GAANNNNTTC 3 cut(s) 215, 1146, 1719
MseI TTAA 5 cut(s) 570, 978, 1281, 2255, 2346
MslI CAYNNNNRTG 3 cut(s) 1442, 1762, 2367
MspI CCGG 2 cut(s) 945, 1898
MspR9I CCNGG 7 cut(s) 156, 696, 929, 945, 968, 1041, 1331
MunI CAATTG 1 cut(s) 2332
Mva1269I GAATGC 1 cut(s) 2084
MvaI CCWGG 6 cut(s) 156, 696, 929, 968, 1041, 1331
MvnI CGCG 1 cut(s) 1770
MwoI GCNNNNNNNGC 2 cut(s) 23, 2575
NciI CCSGG 1 cut(s) 945
NlaIII CATG 7 cut(s) 1260, 1369, 1473, 1586, 2035, 2044, 2401
NlaIV GGNNCC 5 cut(s) 270, 357, 835, 1626, 2065
NmuCI GTSAC 5 cut(s) 682, 1018, 1562, 1876, 2579
NsiI ATGCAT 1 cut(s) 1831
NspV TTCGAA 1 cut(s) 1713
OliI CACNNNNGTG 1 cut(s) 2367
PaeR7I CTCGAG 1 cut(s) 2410
PaqCI CACCTGC 1 cut(s) 343
PasI CCCWGGG 1 cut(s) 1330
PctI GAATGC 1 cut(s) 2084
PdmI GAANNNNTTC 3 cut(s) 215, 1146, 1719
PfeI GAWTC 6 cut(s) 323, 959, 989, 1399, 2415, 2432
PflMI CCANNNNNTGG 1 cut(s) 701
PfoI TCCNGGA 1 cut(s) 927
PkrI GCNGC 7 cut(s) 19, 48, 882, 1453, 2283, 2381, 2427
PleI GAGTC 1 cut(s) 1101
PpsI GAGTC 1 cut(s) 1101
Ppu21I YACGTR 2 cut(s) 1063, 1664
PpuMI RGGWCCY 1 cut(s) 2259
PsiI TTATAA 2 cut(s) 392, 1655
Psp124BI GAGCTC 1 cut(s) 1494
Psp1406I AACGTT 2 cut(s) 936, 2453
Psp5II RGGWCCY 1 cut(s) 2259
Psp6I CCWGG 6 cut(s) 154, 694, 927, 966, 1039, 1329
PspEI GGTNACC 1 cut(s) 1562
PspFI CCCAGC 1 cut(s) 1924
PspGI CCWGG 6 cut(s) 154, 694, 927, 966, 1039, 1329
PspN4I GGNNCC 5 cut(s) 270, 357, 835, 1626, 2065
PspOMI GGGCCC 1 cut(s) 1624
PspPI GGNCC 6 cut(s) 925, 942, 1369, 1624, 1625, 2259
PspPPI RGGWCCY 1 cut(s) 2259
PstI CTGCAG 1 cut(s) 354
PstNI CAGNNNCTG 1 cut(s) 701
PsuI RGATCY 3 cut(s) 910, 1144, 2443
RsaI GTAC 3 cut(s) 281, 591, 835
RsaNI GTAC 3 cut(s) 280, 590, 834
RseI CAYNNNNRTG 3 cut(s) 1442, 1762, 2367
SacI GAGCTC 1 cut(s) 1494
SalI GTCGAC 1 cut(s) 776
SaqAI TTAA 5 cut(s) 570, 978, 1281, 2255, 2346
SatI GCNGC 7 cut(s) 18, 47, 881, 1452, 2282, 2380, 2426
Sau96I GGNCC 6 cut(s) 925, 942, 1369, 1624, 1625, 2259
SchI GAGTC 1 cut(s) 1102
ScrFI CCNGG 7 cut(s) 156, 696, 929, 945, 968, 1041, 1331
SduI GDGCHC 3 cut(s) 1494, 1628, 2411
SfaNI GCATC 5 cut(s) 29, 774, 1075, 1315, 2190
SfcI CTRYAG 4 cut(s) 27, 350, 2012, 2338
Sfr274I CTCGAG 1 cut(s) 2410
SfuI TTCGAA 1 cut(s) 1713
SinI GGWCC 3 cut(s) 925, 1369, 2259
SlaI CTCGAG 1 cut(s) 2410
SmiMI CAYNNNNRTG 3 cut(s) 1442, 1762, 2367
SmlI CTYRAG 5 cut(s) 119, 521, 656, 1386, 2410
SmoI CTYRAG 5 cut(s) 119, 521, 656, 1386, 2410
SsiI CCGC 5 cut(s) 599, 1266, 1454, 1963, 2540
SspI AATATT 1 cut(s) 1228
SspMI CTAG 8 cut(s) 35, 185, 554, 1263, 1727, 1799, 2231, 2561
SstI GAGCTC 1 cut(s) 1494
StyD4I CCNGG 7 cut(s) 154, 694, 927, 943, 966, 1039, 1329
TaaI ACNGT 3 cut(s) 148, 613, 2192
TaiI ACGT 6 cut(s) 631, 783, 939, 1065, 1666, 2456
TaqI TCGA 7 cut(s) 90, 171, 231, 405, 777, 1713, 2411
TfiI GAWTC 6 cut(s) 323, 959, 989, 1399, 2415, 2432
Tru1I TTAA 5 cut(s) 570, 978, 1281, 2255, 2346
Tru9I TTAA 5 cut(s) 570, 978, 1281, 2255, 2346
TscAI CASTG 6 cut(s) 153, 691, 805, 1191, 2128, 2411
TseFI GTSAC 5 cut(s) 682, 1018, 1562, 1876, 2579
TseI GCWGC 7 cut(s) 17, 46, 880, 1451, 2281, 2379, 2425
Tsp45I GTSAC 5 cut(s) 682, 1018, 1562, 1876, 2579
TspDTI ATGAA 8 cut(s) 336, 651, 1354, 1368, 1458, 1923, 2020, 2490
TspGWI ACGGA 2 cut(s) 416, 1091
TspRI CASTG 6 cut(s) 153, 691, 805, 1191, 2128, 2411
Van91I CCANNNNNTGG 1 cut(s) 701
VpaK11BI GGWCC 3 cut(s) 925, 1369, 2259
XagI CCTNNNNNAGG 2 cut(s) 1352, 1501
XapI RAATTY 4 cut(s) 755, 1807, 1838, 2072
XbaI TCTAGA 1 cut(s) 184
XhoI CTCGAG 1 cut(s) 2410
XmiI GTMKAC 1 cut(s) 777
XmnI GAANNNNTTC 3 cut(s) 215, 1146, 1719
XspI CTAG 8 cut(s) 35, 185, 554, 1263, 1727, 1799, 2231, 2561
Zsp2I ATGCAT 1 cut(s) 1831
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.