Rmu_sc0002316.1_g000072

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002316.1
OG0000039
Physical Location & Seq
Reverse (-)
345915 .. 351811
5897 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002316.1_g000072.1.cds

Sequence Viewer

Length: 2640 bp
atgatcgtccgtagtcttgatcctaaaaaggatcctcttcatctgaaggatgatgatgaagatgtgctagaggcagaagtgccttacttgagtacaataggctcattattgtacttagctcaatgcacaagaccagacatctcatttgcagtgaacttgtcaactaagaaagcatttgattgtgaattttttctcgtatcatcaccaacaatggcattgatcggaggagcgggtttgccaataacattttggacgctgtgtgattctgttaagcaaacgaaggatacgctgatgttcaaaccccagctaagggatatcaaatccactttggactcattggaaccactgatcaaagagatggcagagtgtgagaaggaattgggtggtcaagaggaggagctagagaatcttagagtggtaatggagggaggagtggagcttattcgcaagtgctcgaaagcgagcaggttcaagcagtataagtacggcagcaggcttgttgaattgagcaagtcacttcagaggctgttcgggatattgaaagtgcaggggataagggatgtgaagaaggcattggtttcggtgagaaatatcgagagtgtggtgcacagaattgaaggacattgtgtgatacagaacaatcaatctgaacaaattgcagggtggtgtgctgtgcctgagcctccaacgattacggttggattggatgtgcctttgtgggaattgaagaagaagctttttactgacggagtatcgatggtgataattactgctcctggaggatgtggaaaaactacactggcaacaaagttttgcaaggatgcagaagtcaaagataaattcaagagcaatgtcttctttgttactgtttcaaagaagcccaacttatacctaattgtacaagagctgtatcatggagcgggtgcccaggtccccgatttccaaaatgaagcaactgcagttagctggctgcagcaatttctgaagcaaacaggacaaaatcctatgttgttggtcctggatgatgtctgggcaggatcggaattcattcttgagaagtttgatgaattaaagatgtcagattacaagatattggtgacatcaaggtctgcttttccacgatttggttctccatattatttagaatgtttgaacgacgaagatgcaatggcactttttcaccatgcagcatccttaggtgataggagctcttatatttcagaagatcttcagagaaagatagtagaacgttgtatgggatttccacttgcacttacagttgtcggaagatcactttgcgggcagccaatagagatttggcaaaaaagagtactggaatggtctagaggttcttctgttcttgagtctgaacatgatttgcttgattgcctccaaagaagcttagatgctttggatgaagagaagtctcttatcagagaatgcttcatagaccttggtttattttctgaagataaaagaatctcagctactgtcctcattgatatgtgggcagagttatatggcataaatgaggacatttcgtccattgtgaacctctatgaacttgcctctcggagtttggttaatctggtagtcacaaggaatgacaaggatggcgatggctattacactgaacactttgttacacagcatgacatgcttagggagttggctatccaacagattagtcgggaaccactacaacagagaatgagacttatgattgacataagtggagacaacttgcctatgtggtggaaagaacaaaagtatcaatccctcatcgcccgccttgtatctatctcgacagatgaagaattctcatctatatggcaaaatttgccactaccagaagcagaggttttgattttgaactttcagacaaagtattatgccttacctgattttgtggaggaaatgaataaactgaagactctagtactcacgagttcgggtatcagtcctgctgagttgaataactttcaactagttgattcgaaaccaaatctaaagagaatcagactagaacgaatttcatttccttcgataagcaggtatcctatacagttgaaaagtttgaaaaagatttctctattcatgtgtagcattggccaaggttttggtaacagttccatacatatatcagaggcgtttccaaatcttgttgaaatgaatattgattactgcaatgatttggtggagttgcctgccgatctctgtgaccttattcaactgaggaaactcagtgtcaccaattctcataagctctctgtcttacctgaagacattggaaatctagtaaatttagagctgctgaggcttaggtgttgtacagacttgtcagagttacccggctcgattaggaacctcaagaacttaaacttgcttgacatatcgaattgctttagccttaaggaattgcctgaagacattggagaaatgtgcagtttagaaaagctcaacatgagacagtgctcgagattgaatgagttgccttcatcagttgtggatcttgaaaagttaatggaagtgacatgtgatgaagagacagaaatcttatgggagcctttcgtaccgtatctcagtaacatacacataaaggttgtgaaagaagatatcaacctgaattggctccactag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
NB-ARC RPW8

Protein Analysis

879

Amino Acids

99.84

Weight (kDa)

5.08

Isoelectric Point (pI)

44.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1105
Acc36I ACCTGC 2 cut(s) 456, 2043
AccB1I GGYRCC 1 cut(s) 923
AccB7I CCANNNNNTGG 1 cut(s) 1124
AccBSI CCGCTC 2 cut(s) 230, 920
AciI CCGC 4 cut(s) 230, 920, 1299, 1789
AclI AACGTT 1 cut(s) 1249
AclWI GGATC 5 cut(s) 14, 26, 39, 1045, 2517
AcoI YGGCCR 1 cut(s) 2110
AcsI RAATTY 7 cut(s) 185, 839, 1043, 1817, 1837, 2031, 2302
AcuI CTGAAG 8 cut(s) 65, 503, 1004, 1214, 1488, 1949, 2301, 2445
AfaI GTAC 8 cut(s) 94, 113, 485, 900, 1332, 1941, 2332, 2574
AfiI CCNNNNNNNGG 3 cut(s) 309, 310, 1124
AflII CTTAAG 1 cut(s) 2411
AflIII ACRYGT 1 cut(s) 2534
AhdI GACNNNNNGTC 1 cut(s) 1540
AhlI ACTAGT 1 cut(s) 1987
AjnI CCWGG 3 cut(s) 775, 927, 1017
AjuI GAANNNNNNNTTGG 2 cut(s) 557, 589
Alw21I GWGCWC 4 cut(s) 455, 609, 1211, 2477
Alw26I GTCTC 5 cut(s) 1431, 1708, 1731, 2461, 2540
Alw44I GTGCAC 1 cut(s) 605
AlwI GGATC 5 cut(s) 14, 26, 39, 1045, 2517
AlwNI CAGNNNCTG 2 cut(s) 526, 1490
Ama87I CYCGRG 1 cut(s) 2476
AoxI GGCC 1 cut(s) 2110
ApaLI GTGCAC 1 cut(s) 605
ApeKI GCWGC 6 cut(s) 489, 970, 973, 1187, 1303, 2311
ApoI RAATTY 7 cut(s) 185, 839, 1043, 1817, 1837, 2031, 2302
ArsI GACNNNNNNTTYG 2 cut(s) 128, 160
Asp700I GAANNNNTTC 3 cut(s) 189, 1047, 1227
AspS9I GGNCC 2 cut(s) 931, 1015
AsuC2I CCSGG 1 cut(s) 2352
AsuHPI GGTGA 7 cut(s) 195, 595, 772, 1108, 1172, 1211, 2242
AsuII TTCGAA 1 cut(s) 1997
AvaI CYCGRG 1 cut(s) 2476
AvaII GGWCC 2 cut(s) 931, 1015
AxyI CCTNAGG 1 cut(s) 1195
BaeGI GKGCMC 2 cut(s) 609, 928
BaeI ACNNNNGTAYC 2 cut(s) 1754, 1787
BalI TGGCCA 1 cut(s) 2112
BamHI GGATCC 1 cut(s) 31
BanI GGYRCC 1 cut(s) 923
BanII GRGCYC 1 cut(s) 1211
BauI CACGAG 1 cut(s) 1945
BbsI GAAGAC 4 cut(s) 847, 1937, 2289, 2433
Bbv12I GWGCWC 4 cut(s) 455, 609, 1211, 2477
BbvCI CCTCAGC 1 cut(s) 2315
BbvI GCAGC 6 cut(s) 501, 957, 985, 1199, 1315, 2298
BccI CCATC 4 cut(s) 352, 751, 1607, 1613
BceAI ACGGC 1 cut(s) 502
BcgI CGANNNNNNTGC 4 cut(s) 561, 595, 1145, 1179
BciT130I CCWGG 3 cut(s) 777, 929, 1019
BciVI GTATCC 2 cut(s) 277, 2067
BclI TGATCA 1 cut(s) 348
BcnI CCSGG 1 cut(s) 2352
BcoDI GTCTC 5 cut(s) 1431, 1708, 1731, 2461, 2540
BcuI ACTAGT 1 cut(s) 1987
BfaI CTAG 8 cut(s) 68, 401, 1344, 1937, 1988, 2024, 2297, 2638
BfmI CTRYAG 2 cut(s) 957, 971
BfrI CTTAAG 1 cut(s) 2411
BfuAI ACCTGC 2 cut(s) 456, 2043
BfuI GTATCC 2 cut(s) 277, 2067
BglII AGATCT 1 cut(s) 1225
BisI GCNGC 6 cut(s) 490, 971, 974, 1188, 1304, 2312
BlsI GCNGC 6 cut(s) 491, 972, 975, 1189, 1305, 2313
BmcAI AGTACT 2 cut(s) 1332, 1941
Bme1390I CCNGG 4 cut(s) 777, 929, 1019, 2352
Bme18I GGWCC 2 cut(s) 931, 1015
BmeRI GACNNNNNGTC 1 cut(s) 1540
BmeT110I CYCGRG 1 cut(s) 2476
BmgT120I GGNCC 2 cut(s) 931, 1015
BmiI GGNNCC 8 cut(s) 33, 342, 925, 933, 1695, 2366, 2565, 2633
BmrFI CCNGG 4 cut(s) 777, 929, 1019, 2352
BmsI GCATC 4 cut(s) 811, 1153, 1199, 1396
BpiI GAAGAC 4 cut(s) 847, 1937, 2289, 2433
BpmI CTGGAG 1 cut(s) 798
Bpu10I CCTNAGC 5 cut(s) 308, 678, 1661, 2315, 2321
Bpu14I TTCGAA 1 cut(s) 1997
BpuEI CTTGAG 4 cut(s) 109, 1073, 1382, 2354
BpuMI CCSGG 1 cut(s) 2352
Bsa29I ATCGAT 1 cut(s) 755
BsaJI CCNNGG 3 cut(s) 927, 1453, 2113
Bsc4I CCNNNNNNNGG 3 cut(s) 309, 310, 1124
Bse1I ACTGG 2 cut(s) 804, 1338
Bse21I CCTNAGG 1 cut(s) 1195
Bse3DI GCAATG 3 cut(s) 856, 1173, 2194
BseBI CCWGG 3 cut(s) 777, 929, 1019
BseCI ATCGAT 1 cut(s) 755
BseDI CCNNGG 3 cut(s) 927, 1453, 2113
BseGI GGATG 9 cut(s) 55, 565, 712, 788, 826, 1027, 1190, 1420, 1618
BseLI CCNNNNNNNGG 3 cut(s) 309, 310, 1124
BseMI GCAATG 3 cut(s) 856, 1173, 2194
BseMII CTCAG 7 cut(s) 669, 1497, 1959, 2225, 2257, 2306, 2596
BseNI ACTGG 2 cut(s) 804, 1338
BseRI GAGGAG 4 cut(s) 240, 407, 410, 444
BseSI GKGCMC 2 cut(s) 609, 928
BseXI GCAGC 6 cut(s) 501, 957, 985, 1199, 1315, 2298
BseYI CCCAGC 1 cut(s) 303
BsgI GTGCAG 2 cut(s) 566, 2464
BshFI GGCC 1 cut(s) 2112
BshNI GGYRCC 1 cut(s) 923
BshVI ATCGAT 1 cut(s) 755
BsiHKAI GWGCWC 4 cut(s) 455, 609, 1211, 2477
BsiHKCI CYCGRG 1 cut(s) 2476
BsiSI CCGG 1 cut(s) 2352
BslFI GGGAC 1 cut(s) 917
BslI CCNNNNNNNGG 3 cut(s) 309, 310, 1124
BsmAI GTCTC 5 cut(s) 1431, 1708, 1731, 2461, 2540
BsmFI GGGAC 1 cut(s) 917
BsmI GAATGC 1 cut(s) 1445
BsnI GGCC 1 cut(s) 2112
BsoBI CYCGRG 1 cut(s) 2476
Bsp119I TTCGAA 1 cut(s) 1997
Bsp1286I GDGCHC 5 cut(s) 455, 609, 928, 1211, 2477
Bsp1407I TGTACA 2 cut(s) 898, 2330
BspACI CCGC 4 cut(s) 230, 920, 1299, 1789
BspANI GGCC 1 cut(s) 2112
BspCNI CTCAG 7 cut(s) 670, 1496, 1960, 2226, 2256, 2307, 2595
BspDI ATCGAT 1 cut(s) 755
BspLI GGNNCC 8 cut(s) 33, 342, 925, 933, 1695, 2366, 2565, 2633
BspMAI CTGCAG 2 cut(s) 961, 975
BspMI ACCTGC 2 cut(s) 456, 2043
BspPI GGATC 5 cut(s) 14, 26, 39, 1045, 2517
BspT104I TTCGAA 1 cut(s) 1997
BspT107I GGYRCC 1 cut(s) 923
BspTI CTTAAG 1 cut(s) 2411
BsrBI CCGCTC 2 cut(s) 230, 920
BsrDI GCAATG 3 cut(s) 856, 1173, 2194
BsrGI TGTACA 2 cut(s) 898, 2330
BsrI ACTGG 2 cut(s) 804, 1338
BssECI CCNNGG 3 cut(s) 927, 1453, 2113
BssSI CACGAG 1 cut(s) 1945
BssT1I CCWWGG 2 cut(s) 1453, 2113
Bst2BI CACGAG 1 cut(s) 1945
Bst2UI CCWGG 3 cut(s) 777, 929, 1019
Bst4CI ACNGT 8 cut(s) 697, 868, 1279, 1492, 2067, 2129, 2472, 2577
Bst6I CTCTTC 3 cut(s) 42, 1413, 2538
BstAFI CTTAAG 1 cut(s) 2411
BstAPI GCANNNNNTGC 2 cut(s) 1657, 1840
BstAUI TGTACA 2 cut(s) 898, 2330
BstBI TTCGAA 1 cut(s) 1997
BstC8I GCNNGC 6 cut(s) 463, 494, 968, 1301, 1789, 2208
BstF5I GGATG 9 cut(s) 55, 565, 712, 788, 826, 1027, 1190, 1420, 1618
BstMAI GTCTC 5 cut(s) 1431, 1708, 1731, 2461, 2540
BstMWI GCNNNNNNNGC 3 cut(s) 1657, 1840, 2317
BstNI CCWGG 3 cut(s) 777, 929, 1019
BstNSI RCATGY 2 cut(s) 1660, 2538
BstSCI CCNGG 4 cut(s) 775, 927, 1017, 2350
BstSFI CTRYAG 2 cut(s) 957, 971
BstSLI GKGCMC 2 cut(s) 609, 928
BstV1I GCAGC 6 cut(s) 501, 957, 985, 1199, 1315, 2298
BstV2I GAAGAC 4 cut(s) 847, 1937, 2289, 2433
BstX2I RGATCY 3 cut(s) 31, 1225, 2509
BstXI CCANNNNNNTGG 1 cut(s) 2120
BstYI RGATCY 3 cut(s) 31, 1225, 2509
Bsu15I ATCGAT 1 cut(s) 755
Bsu36I CCTNAGG 1 cut(s) 1195
BsuI GTATCC 2 cut(s) 277, 2067
BsuRI GGCC 1 cut(s) 2112
BsuTUI ATCGAT 1 cut(s) 755
BtgZI GCGATG 2 cut(s) 1632, 1768
BtsCI GGATG 9 cut(s) 55, 565, 712, 788, 826, 1027, 1190, 1420, 1618
BtsI GCAGTG 1 cut(s) 156
BtsIMutI CAGTG 6 cut(s) 156, 344, 797, 1629, 2251, 2477
BveI ACCTGC 2 cut(s) 456, 2043
Cac8I GCNNGC 6 cut(s) 463, 494, 968, 1301, 1789, 2208
CaiI CAGNNNCTG 2 cut(s) 526, 1490
Cfr13I GGNCC 2 cut(s) 931, 1015
ClaI ATCGAT 1 cut(s) 755
CseI GACGC 1 cut(s) 262
Csp6I GTAC 8 cut(s) 93, 112, 484, 899, 1331, 1940, 2331, 2573
CviAII CATG 8 cut(s) 914, 1184, 1373, 1652, 1657, 2098, 2464, 2535
CviQI GTAC 8 cut(s) 93, 112, 484, 899, 1331, 1940, 2331, 2573
DrdI GACNNNNNNGTC 1 cut(s) 1105
DriI GACNNNNNGTC 1 cut(s) 1540
DseDI GACNNNNNNGTC 1 cut(s) 1105
EaeI YGGCCR 1 cut(s) 2110
Eam1104I CTCTTC 3 cut(s) 42, 1413, 2538
Eam1105I GACNNNNNGTC 1 cut(s) 1540
EarI CTCTTC 3 cut(s) 42, 1413, 2538
Ecl136II GAGCTC 1 cut(s) 1209
Eco130I CCWWGG 2 cut(s) 1453, 2113
Eco24I GRGCYC 1 cut(s) 1211
Eco32I GATATC 2 cut(s) 316, 2617
Eco47I GGWCC 2 cut(s) 931, 1015
Eco53kI GAGCTC 1 cut(s) 1209
Eco57I CTGAAG 8 cut(s) 65, 503, 1004, 1214, 1488, 1949, 2301, 2445
Eco81I CCTNAGG 1 cut(s) 1195
Eco88I CYCGRG 1 cut(s) 2476
EcoICRI GAGCTC 1 cut(s) 1209
EcoO109I RGGNCCY 1 cut(s) 931
EcoRI GAATTC 2 cut(s) 1043, 1817
EcoRII CCWGG 3 cut(s) 775, 927, 1017
EcoRV GATATC 2 cut(s) 316, 2617
EcoT14I CCWWGG 2 cut(s) 1453, 2113
EcoT38I GRGCYC 1 cut(s) 1211
ErhI CCWWGG 2 cut(s) 1453, 2113
FaeI CATG 8 cut(s) 917, 1187, 1376, 1655, 1660, 2101, 2467, 2538
FalI AAGNNNNNCTT 4 cut(s) 869, 901, 1096, 1128
FaqI GGGAC 1 cut(s) 917
FatI CATG 8 cut(s) 913, 1183, 1372, 1651, 1656, 2097, 2463, 2534
FauI CCCGC 4 cut(s) 223, 913, 1292, 1796
FbaI TGATCA 1 cut(s) 348
Fnu4HI GCNGC 6 cut(s) 490, 971, 974, 1188, 1304, 2312
FokI GGATG 9 cut(s) 62, 572, 719, 795, 833, 1034, 1177, 1427, 1625
FriOI GRGCYC 1 cut(s) 1211
Fsp4HI GCNGC 6 cut(s) 490, 971, 974, 1188, 1304, 2312
FspBI CTAG 8 cut(s) 68, 401, 1344, 1937, 1988, 2024, 2297, 2638
GluI GCNGC 6 cut(s) 490, 971, 974, 1188, 1304, 2312
GsaI CCCAGC 1 cut(s) 307
GsuI CTGGAG 1 cut(s) 798
HaeIII GGCC 1 cut(s) 2112
HapII CCGG 1 cut(s) 2352
HgaI GACGC 1 cut(s) 262
Hin1II CATG 8 cut(s) 917, 1187, 1376, 1655, 1660, 2101, 2467, 2538
HincII GTYRAC 1 cut(s) 162
HindII GTYRAC 1 cut(s) 162
HindIII AAGCTT 2 cut(s) 734, 1399
HinfI GANTC 8 cut(s) 263, 332, 406, 1364, 1479, 1933, 1994, 2016
HpaII CCGG 1 cut(s) 2352
HphI GGTGA 7 cut(s) 195, 595, 772, 1108, 1172, 1211, 2242
Hpy166II GTNNAC 4 cut(s) 154, 162, 607, 1552
Hpy8I GTNNAC 4 cut(s) 154, 162, 607, 1552
Hpy99I CGWCG 1 cut(s) 1160
HpyAV CCTTC 7 cut(s) 40, 274, 367, 562, 611, 2052, 2505
HpyCH4III ACNGT 8 cut(s) 697, 868, 1279, 1492, 2067, 2129, 2472, 2577
HpyCH4IV ACGT 1 cut(s) 1249
HpyF10VI GCNNNNNNNGC 3 cut(s) 1657, 1840, 2317
HpySE526I ACGT 1 cut(s) 1249
Hsp92II CATG 8 cut(s) 917, 1187, 1376, 1655, 1660, 2101, 2467, 2538
Ksp22I TGATCA 1 cut(s) 348
LmnI GCTCC 8 cut(s) 227, 397, 436, 778, 917, 1206, 2563, 2637
Lsp1109I GCAGC 6 cut(s) 501, 957, 985, 1199, 1315, 2298
LweI GCATC 4 cut(s) 811, 1153, 1199, 1396
MaeI CTAG 8 cut(s) 68, 401, 1344, 1937, 1988, 2024, 2297, 2638
MaeII ACGT 1 cut(s) 1249
MbiI CCGCTC 2 cut(s) 230, 920
MflI RGATCY 3 cut(s) 31, 1225, 2509
MhlI GDGCHC 5 cut(s) 455, 609, 928, 1211, 2477
MlsI TGGCCA 1 cut(s) 2112
MluNI TGGCCA 1 cut(s) 2112
MlyI GAGTC 3 cut(s) 326, 1373, 1927
MmeI TCCRAC 4 cut(s) 679, 710, 1264, 1702
Mox20I TGGCCA 1 cut(s) 2112
MroXI GAANNNNTTC 3 cut(s) 189, 1047, 1227
MscI TGGCCA 1 cut(s) 2112
MseI TTAA 6 cut(s) 270, 1070, 1584, 2378, 2412, 2522
MslI CAYNNNNRTG 2 cut(s) 1502, 1828
Msp20I TGGCCA 1 cut(s) 2112
MspCI CTTAAG 1 cut(s) 2411
MspI CCGG 1 cut(s) 2352
MspR9I CCNGG 4 cut(s) 777, 929, 1019, 2352
Mva1269I GAATGC 1 cut(s) 1445
MvaI CCWGG 3 cut(s) 777, 929, 1019
MwoI GCNNNNNNNGC 3 cut(s) 1657, 1840, 2317
NciI CCSGG 1 cut(s) 2352
NlaIII CATG 8 cut(s) 917, 1187, 1376, 1655, 1660, 2101, 2467, 2538
NlaIV GGNNCC 8 cut(s) 33, 342, 925, 933, 1695, 2366, 2565, 2633
NmuCI GTSAC 6 cut(s) 513, 1096, 1594, 2219, 2248, 2530
NspI RCATGY 2 cut(s) 1660, 2538
NspV TTCGAA 1 cut(s) 1997
PaeR7I CTCGAG 1 cut(s) 2476
PciI ACATGT 1 cut(s) 2534
PctI GAATGC 1 cut(s) 1445
PdmI GAANNNNTTC 3 cut(s) 189, 1047, 1227
PfeI GAWTC 5 cut(s) 263, 406, 1479, 1994, 2016
PflMI CCANNNNNTGG 1 cut(s) 1124
PfoI TCCNGGA 2 cut(s) 775, 1017
PkrI GCNGC 6 cut(s) 491, 972, 975, 1189, 1305, 2313
PleI GAGTC 3 cut(s) 326, 1372, 1927
PpsI GAGTC 3 cut(s) 326, 1372, 1927
PpuMI RGGWCCY 1 cut(s) 931
PscI ACATGT 1 cut(s) 2534
Psp124BI GAGCTC 1 cut(s) 1211
Psp1406I AACGTT 1 cut(s) 1249
Psp5II RGGWCCY 1 cut(s) 931
Psp6I CCWGG 3 cut(s) 775, 927, 1017
PspFI CCCAGC 1 cut(s) 303
PspGI CCWGG 3 cut(s) 775, 927, 1017
PspN4I GGNNCC 8 cut(s) 33, 342, 925, 933, 1695, 2366, 2565, 2633
PspPI GGNCC 2 cut(s) 931, 1015
PspPPI RGGWCCY 1 cut(s) 931
PstI CTGCAG 2 cut(s) 961, 975
PstNI CAGNNNCTG 2 cut(s) 526, 1490
PsuI RGATCY 3 cut(s) 31, 1225, 2509
RsaI GTAC 8 cut(s) 94, 113, 485, 900, 1332, 1941, 2332, 2574
RsaNI GTAC 8 cut(s) 93, 112, 484, 899, 1331, 1940, 2331, 2573
RseI CAYNNNNRTG 2 cut(s) 1502, 1828
SacI GAGCTC 1 cut(s) 1211
SaqAI TTAA 6 cut(s) 270, 1070, 1584, 2378, 2412, 2522
SatI GCNGC 6 cut(s) 490, 971, 974, 1188, 1304, 2312
Sau96I GGNCC 2 cut(s) 931, 1015
ScaI AGTACT 2 cut(s) 1332, 1941
SchI GAGTC 3 cut(s) 326, 1373, 1927
ScrFI CCNGG 4 cut(s) 777, 929, 1019, 2352
SduI GDGCHC 5 cut(s) 455, 609, 928, 1211, 2477
SfaNI GCATC 4 cut(s) 811, 1153, 1199, 1396
SfcI CTRYAG 2 cut(s) 957, 971
Sfr274I CTCGAG 1 cut(s) 2476
SfuI TTCGAA 1 cut(s) 1997
SinI GGWCC 2 cut(s) 931, 1015
SlaI CTCGAG 1 cut(s) 2476
SmiMI CAYNNNNRTG 2 cut(s) 1502, 1828
SmlI CTYRAG 6 cut(s) 88, 1052, 1361, 2369, 2411, 2476
SmoI CTYRAG 6 cut(s) 88, 1052, 1361, 2369, 2411, 2476
SpeI ACTAGT 1 cut(s) 1987
SsiI CCGC 4 cut(s) 230, 920, 1299, 1789
SspI AATATT 1 cut(s) 2176
SspMI CTAG 8 cut(s) 68, 401, 1344, 1937, 1988, 2024, 2297, 2638
SstI GAGCTC 1 cut(s) 1211
StyD4I CCNGG 4 cut(s) 775, 927, 1017, 2350
StyI CCWWGG 2 cut(s) 1453, 2113
TaaI ACNGT 8 cut(s) 697, 868, 1279, 1492, 2067, 2129, 2472, 2577
TaiI ACGT 1 cut(s) 1252
TaqI TCGA 9 cut(s) 455, 594, 755, 1805, 1997, 2045, 2357, 2396, 2477
TatI WGTACW 6 cut(s) 92, 111, 898, 1330, 1939, 2330
TfiI GAWTC 5 cut(s) 263, 406, 1479, 1994, 2016
Tru1I TTAA 6 cut(s) 270, 1070, 1584, 2378, 2412, 2522
Tru9I TTAA 6 cut(s) 270, 1070, 1584, 2378, 2412, 2522
TscAI CASTG 6 cut(s) 156, 351, 804, 1636, 2251, 2477
TseFI GTSAC 6 cut(s) 513, 1096, 1594, 2219, 2248, 2530
TseI GCWGC 6 cut(s) 489, 970, 973, 1187, 1303, 2311
Tsp45I GTSAC 6 cut(s) 513, 1096, 1594, 2219, 2248, 2530
TspGWI ACGGA 1 cut(s) 762
TspRI CASTG 6 cut(s) 156, 351, 804, 1636, 2251, 2477
Van91I CCANNNNNTGG 1 cut(s) 1124
Vha464I CTTAAG 1 cut(s) 2411
VneI GTGCAC 1 cut(s) 605
VpaK11BI GGWCC 2 cut(s) 931, 1015
XapI RAATTY 7 cut(s) 185, 839, 1043, 1817, 1837, 2031, 2302
XbaI TCTAGA 1 cut(s) 1343
XceI RCATGY 2 cut(s) 1660, 2538
XcmI CCANNNNNNNNNTGG 2 cut(s) 246, 1314
XhoI CTCGAG 1 cut(s) 2476
XmnI GAANNNNTTC 3 cut(s) 189, 1047, 1227
XspI CTAG 8 cut(s) 68, 401, 1344, 1937, 1988, 2024, 2297, 2638
ZrmI AGTACT 2 cut(s) 1332, 1941
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.