Rmu_sc0002316.1_g000102

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002316.1
OG0000039
Physical Location & Seq
Reverse (-)
442452 .. 447864
5413 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002316.1_g000102.1.cds

Sequence Viewer

Length: 2622 bp
atggccaatccagcggatgctttcgccggggctgctgcaggattactgttcagtgtgctctatgatggcctcaaggaactgaccaccaagtatgtgctgttcaaacacgtcctcaaaagcgtcaagtccacactcgaatctctggagcaagtggttcaagatatagcacgacttaacgaggatctggatcgcccggaggaagaactagcgggtctaaaaacccaactacaggagggtgaagtgctcgttgccaagtgcggcaaggttcgtgtgtggagcgtgtacaagaagtacaagtactccaggaaacttcttggatggaatgacagtcttaaagaacagttggatatgctcaaagttcatgcaataagagatgtcaaggaggccttgacaacggggaagagaacagagaagattgtgagccgaatcgaatcgaccggtttcaatatagaggagggaatggagcaaattgagactaaaactgcaaatctacaggtgacggtgagccgagtggaagcgggagtttcgaacatagaggctgggataaagcagatgcaaccggaagctaaaattgaagcttggtgtgcagtacctgaacttccaactgttacagttggattggatgggcctttgaacgaactgaagatgaagttgttcaacaatggagtgtcaatggttgtgctgaccgctcccggaggatgtggaaaaaccactttggcaacaaagttctgtcaagatgagcgagtccaagacttccaccaaattgtacaagagctatacaaaagcaagggtaacaaggcacctacttttaaaaatgacgaaaatgcactcacgtggctgcaaacatttatgagggaagaaggacaaaaccctttactgttggtcttggatgatgtttggtctggatcagactctttacttgcaaagtttgaattcaaaatgcaagattacaaagttttagtgacatcaagatctgaatttccaagatatggctcttatgcgttgcagtcattggattttgacaatgcaatgaaactctttcatcatgcagcatccttgggagaaagaagtttgcatattccaccagctatatcaagacaggtagtagagggctgtaaaggatttccacttgctataacagttgccggaaaatcactttgcggacagcctatagagatttggcagaaaagactcattgactggtccaaacattcttcgattcttgactcagagactgaattgcttcttcgcctccgaaccagtttagatgtctcaaataaggaaatgagtatggtagaatgtttcttagacctaggttcatttcctgaagatcaaagaatccctgttgctgccctcattgatatctggaccgagtcttaccgttcactggatgaagacattttgtgtgttgaaaacctccaccagatcaccaaccgaagtctagctaatcttgtagtcacaaggaaggatcagctgcagggggatggatactacagtgaacattttgttacccagcatgatctgcttagagagctggctatctatgagacaagacaagatgaccccggacatagagaaagactaattataaacatatctaaagacaattttcccaagtggtggagtgaacagaagtatcaatgcatgaaggctcgcctgttatctatctcaactgatggagcgttttcaacaaaatggcacaacatggacctaccagtagctgaggttctagtcttgaattttcagaccaagaactatgcattaccccaatttgtggagaaaatggttaagttgaaggtactggtagtcacaaattatggtattgtgccttcagaattaacaaatttcgaaatactgtgtacatcatcaaatttgaagagaatgagattggaacgcatctcaattccatccatagccaagcaccccatgcaattgaatggtctccagaagatttctttattcatgtgtaatattggtcaagctttcagcaatgggtcaatccaattttcacatgcatggccaaatctagtggaagtgaacattgactattgcaatgatttggtggcattgcctgctgacaccagtgatttgattcatctaaagaagctcagcatcaccaactgtcataagctacttgccttgcctgaagatattggaaagctggccaaattagaattgttgaggctaaggtcttgtacaggcttagcaaagttgccgggttcgactgggaacctcaagatgctaaaatctcttgatatatcttactgcttcagcattaaggagttgcctgaagactttggtgaattgagcagcttaagagagcttaacatgagagactgctcaagattgcaagagctgcctttatcagtttcaaatctggagcatttggaagtgataggtgatgatgagacacaaagaatggtcaatccagtggataaactttttgatgagctgtacattgtctttaaagacctcatcaagaagaatattgaatttaaagggaaacttgaaggcatcgaagccaagctagaagctctaaagccggtgatccgagacatggtgcagaataatgaggtattagatcgctcaaggaaggaactaactgttggaggacaagtatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
NB-ARC RPW8

Protein Analysis

873

Amino Acids

98.67

Weight (kDa)

5.91

Isoelectric Point (pI)

40.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1589
AccB1I GGYRCC 1 cut(s) 799
AccB7I CCANNNNNTGG 3 cut(s) 989, 1620, 1774
AccBSI CCGCTC 1 cut(s) 689
AciI CCGC 6 cut(s) 14, 209, 258, 518, 687, 1161
AclWI GGATC 5 cut(s) 189, 195, 913, 1476, 2542
AcoI YGGCCR 3 cut(s) 3, 2018, 2163
AcsI RAATTY 6 cut(s) 932, 977, 1738, 1843, 1870, 2492
AcuI CTGAAG 6 cut(s) 662, 1347, 1815, 2166, 2254, 2310
AcvI CACGTG 1 cut(s) 834
AfaI GTAC 9 cut(s) 284, 293, 299, 591, 768, 1800, 1861, 2197, 2456
AfiI CCNNNNNNNGG 6 cut(s) 229, 989, 1387, 1620, 1774, 2557
AflII CTTAAG 1 cut(s) 2314
AflIII ACRYGT 1 cut(s) 106
AgeI ACCGGT 1 cut(s) 437
AjiI CACGTC 1 cut(s) 109
AjnI CCWGG 1 cut(s) 302
AjuI GAANNNNNNNTTGG 2 cut(s) 2589, 2621
AleI CACNNNNGTG 1 cut(s) 832
Alw21I GWGCWC 2 cut(s) 60, 246
Alw26I GTCTC 8 cut(s) 467, 1226, 1276, 1541, 1946, 2328, 2402, 2547
AlwI GGATC 5 cut(s) 189, 195, 913, 1476, 2542
AlwNI CAGNNNCTG 3 cut(s) 593, 1235, 1721
AoxI GGCC 6 cut(s) 3, 67, 384, 626, 2018, 2163
ApeKI GCWGC 8 cut(s) 32, 35, 838, 1049, 1349, 1474, 2310, 2356
ApoI RAATTY 6 cut(s) 932, 977, 1738, 1843, 1870, 2492
AsiGI ACCGGT 1 cut(s) 437
Asp700I GAANNNNTTC 2 cut(s) 653, 1242
AspA2I CCTAGG 1 cut(s) 1312
AspS9I GGNCC 4 cut(s) 626, 1203, 1368, 1708
AsuC2I CCSGG 5 cut(s) 28, 194, 693, 1566, 2217
AsuHPI GGTGA 8 cut(s) 248, 508, 514, 1420, 2107, 2312, 2411, 2557
AsuII TTCGAA 2 cut(s) 527, 1848
AvaII GGWCC 3 cut(s) 1203, 1368, 1708
AvrII CCTAGG 1 cut(s) 1312
BaeI ACNNNNGTAYC 4 cut(s) 1480, 1513, 1619, 1652
BalI TGGCCA 3 cut(s) 5, 2020, 2165
BanI GGYRCC 1 cut(s) 799
BarI GAAGNNNNNNTAC 6 cut(s) 281, 313, 582, 614, 1813, 1845
BbrPI CACGTG 1 cut(s) 834
BbsI GAAGAC 2 cut(s) 1401, 2298
Bbv12I GWGCWC 2 cut(s) 60, 246
BbvCI CCTCAGC 1 cut(s) 1722
BbvI GCAGC 8 cut(s) 19, 22, 825, 1061, 1336, 1461, 2322, 2343
BccI CCATC 6 cut(s) 59, 312, 617, 1478, 1670, 1915
BciT130I CCWGG 1 cut(s) 304
BciVI GTATCC 1 cut(s) 1481
BcnI CCSGG 5 cut(s) 28, 194, 693, 1566, 2217
BcoDI GTCTC 8 cut(s) 467, 1226, 1276, 1541, 1946, 2328, 2402, 2547
BfaI CTAG 6 cut(s) 206, 1313, 1442, 1730, 2027, 2528
BfmI CTRYAG 6 cut(s) 36, 227, 491, 1170, 1475, 1492
BfrI CTTAAG 1 cut(s) 2314
BfuI GTATCC 1 cut(s) 1481
BglII AGATCT 1 cut(s) 971
BisI GCNGC 9 cut(s) 33, 36, 259, 839, 1050, 1350, 1475, 2311, 2357
BlnI CCTAGG 1 cut(s) 1312
BlpI GCTNAGC 2 cut(s) 2108, 2203
BlsI GCNGC 9 cut(s) 34, 37, 260, 840, 1051, 1351, 1476, 2312, 2358
BmcAI AGTACT 1 cut(s) 299
Bme1390I CCNGG 6 cut(s) 28, 194, 304, 693, 1566, 2217
Bme18I GGWCC 3 cut(s) 1203, 1368, 1708
BmgBI CACGTC 1 cut(s) 109
BmgT120I GGNCC 4 cut(s) 626, 1203, 1368, 1708
BmiI GGNNCC 2 cut(s) 801, 2231
BmrFI CCNGG 6 cut(s) 28, 194, 304, 693, 1566, 2217
BmrI ACTGGG 1 cut(s) 2235
BmsI GCATC 7 cut(s) 7, 543, 1061, 1905, 2121, 2229, 2523
BmuI ACTGGG 1 cut(s) 2235
BpiI GAAGAC 2 cut(s) 1401, 2298
BpmI CTGGAG 4 cut(s) 164, 286, 1928, 2399
Bpu10I CCTNAGC 2 cut(s) 1722, 2186
Bpu1102I GCTNAGC 2 cut(s) 2108, 2203
Bpu14I TTCGAA 2 cut(s) 527, 1848
BpuEI CTTGAG 4 cut(s) 56, 2219, 2326, 2572
BpuMI CCSGG 5 cut(s) 28, 194, 693, 1566, 2217
BsaAI YACGTR 1 cut(s) 834
BsaBI GATNNNNATC 1 cut(s) 186
BsaI GGTCTC 1 cut(s) 1946
BsaJI CCNNGG 4 cut(s) 27, 1056, 1312, 1564
BsaWI WCCGGW 2 cut(s) 437, 559
BsaXI ACNNNNNCTCC 3 cut(s) 284, 314, 2601
Bsc4I CCNNNNNNNGG 6 cut(s) 229, 989, 1387, 1620, 1774, 2557
Bse118I RCCGGY 2 cut(s) 437, 2542
Bse1I ACTGG 8 cut(s) 1205, 1260, 1392, 1715, 1806, 2082, 2230, 2429
Bse3DI GCAATG 4 cut(s) 1035, 1996, 2059, 2066
Bse8I GATNNNNATC 1 cut(s) 186
BseBI CCWGG 1 cut(s) 304
BseDI CCNNGG 4 cut(s) 27, 1056, 1312, 1564
BseGI GGATG 9 cut(s) 22, 323, 628, 704, 895, 1052, 1396, 1489, 1907
BseJI GATNNNNATC 1 cut(s) 186
BseLI CCNNNNNNNGG 6 cut(s) 229, 989, 1387, 1620, 1774, 2557
BseMI GCAATG 4 cut(s) 1035, 1996, 2059, 2066
BseMII CTCAG 3 cut(s) 1242, 1713, 2122
BseNI ACTGG 8 cut(s) 1205, 1260, 1392, 1715, 1806, 2082, 2230, 2429
BseRI GAGGAG 1 cut(s) 467
BseXI GCAGC 8 cut(s) 19, 22, 825, 1061, 1336, 1461, 2322, 2343
BseYI CCCAGC 2 cut(s) 539, 1512
BsgI GTGCAG 2 cut(s) 606, 2582
Bsh1285I CGRYCG 1 cut(s) 438
BshFI GGCC 6 cut(s) 5, 69, 386, 628, 2020, 2165
BshNI GGYRCC 1 cut(s) 799
BshTI ACCGGT 1 cut(s) 437
BsiEI CGRYCG 1 cut(s) 438
BsiHKAI GWGCWC 2 cut(s) 60, 246
BsiSI CCGG 9 cut(s) 27, 194, 438, 560, 693, 1146, 1566, 2216, 2543
BslI CCNNNNNNNGG 6 cut(s) 229, 989, 1387, 1620, 1774, 2557
BsmAI GTCTC 8 cut(s) 467, 1226, 1276, 1541, 1946, 2328, 2402, 2547
BsnI GGCC 6 cut(s) 5, 69, 386, 628, 2020, 2165
Bso31I GGTCTC 1 cut(s) 1946
Bsp119I TTCGAA 2 cut(s) 527, 1848
Bsp1286I GDGCHC 2 cut(s) 60, 246
Bsp1407I TGTACA 5 cut(s) 282, 766, 1859, 2195, 2454
Bsp1720I GCTNAGC 2 cut(s) 2108, 2203
BspACI CCGC 6 cut(s) 14, 209, 258, 518, 687, 1161
BspANI GGCC 6 cut(s) 5, 69, 386, 628, 2020, 2165
BspCNI CTCAG 3 cut(s) 1241, 1714, 2121
BspLI GGNNCC 2 cut(s) 801, 2231
BspMAI CTGCAG 2 cut(s) 40, 1479
BspPI GGATC 5 cut(s) 189, 195, 913, 1476, 2542
BspT104I TTCGAA 2 cut(s) 527, 1848
BspT107I GGYRCC 1 cut(s) 799
BspTI CTTAAG 1 cut(s) 2314
BspTNI GGTCTC 1 cut(s) 1946
BsrBI CCGCTC 1 cut(s) 689
BsrDI GCAATG 4 cut(s) 1035, 1996, 2059, 2066
BsrFI RCCGGY 2 cut(s) 437, 2542
BsrGI TGTACA 5 cut(s) 282, 766, 1859, 2195, 2454
BsrI ACTGG 8 cut(s) 1205, 1260, 1392, 1715, 1806, 2082, 2230, 2429
BssAI RCCGGY 2 cut(s) 437, 2542
BssECI CCNNGG 4 cut(s) 27, 1056, 1312, 1564
BssT1I CCWWGG 2 cut(s) 1056, 1312
Bst2UI CCWGG 1 cut(s) 304
Bst6I CTCTTC 2 cut(s) 395, 1871
BstAFI CTTAAG 1 cut(s) 2314
BstAPI GCANNNNNTGC 4 cut(s) 1522, 1927, 2072, 2356
BstAUI TGTACA 5 cut(s) 282, 766, 1859, 2195, 2454
BstBAI YACGTR 1 cut(s) 834
BstBI TTCGAA 2 cut(s) 527, 1848
BstC8I GCNNGC 4 cut(s) 1536, 1654, 2073, 2163
BstDEI CTNAG 7 cut(s) 1228, 1306, 1526, 1722, 2108, 2186, 2203
BstF5I GGATG 9 cut(s) 22, 323, 628, 704, 895, 1052, 1396, 1489, 1907
BstMAI GTCTC 8 cut(s) 467, 1226, 1276, 1541, 1946, 2328, 2402, 2547
BstMCI CGRYCG 1 cut(s) 438
BstMWI GCNNNNNNNGC 8 cut(s) 11, 32, 584, 1522, 1531, 1927, 2072, 2356
BstNI CCWGG 1 cut(s) 304
BstNSI RCATGY 1 cut(s) 2015
BstSCI CCNGG 6 cut(s) 26, 192, 302, 691, 1564, 2215
BstSFI CTRYAG 6 cut(s) 36, 227, 491, 1170, 1475, 1492
BstV1I GCAGC 8 cut(s) 19, 22, 825, 1061, 1336, 1461, 2322, 2343
BstV2I GAAGAC 2 cut(s) 1401, 2298
BstX2I RGATCY 2 cut(s) 181, 971
BstYI RGATCY 2 cut(s) 181, 971
BsuI GTATCC 1 cut(s) 1481
BsuRI GGCC 6 cut(s) 5, 69, 386, 628, 2020, 2165
BtrI CACGTC 1 cut(s) 109
BtsCI GGATG 9 cut(s) 22, 323, 628, 704, 895, 1052, 1396, 1489, 1907
BtsIMutI CAGTG 5 cut(s) 58, 1385, 1501, 2089, 2436
Cac8I GCNNGC 4 cut(s) 1536, 1654, 2073, 2163
CaiI CAGNNNCTG 3 cut(s) 593, 1235, 1721
Cfr10I RCCGGY 2 cut(s) 437, 2542
Cfr13I GGNCC 4 cut(s) 626, 1203, 1368, 1708
CseI GACGC 1 cut(s) 109
Csp6I GTAC 9 cut(s) 283, 292, 298, 590, 767, 1799, 1860, 2196, 2455
CspAI ACCGGT 1 cut(s) 437
CspCI CAANNNNNGTGG 2 cut(s) 2010, 2045
CviQI GTAC 9 cut(s) 283, 292, 298, 590, 767, 1799, 1860, 2196, 2455
DdeI CTNAG 7 cut(s) 1228, 1306, 1526, 1722, 2108, 2186, 2203
DraI TTTAAA 3 cut(s) 811, 2467, 2497
EaeI YGGCCR 3 cut(s) 3, 2018, 2163
Eam1104I CTCTTC 2 cut(s) 395, 1871
EarI CTCTTC 2 cut(s) 395, 1871
Eco130I CCWWGG 2 cut(s) 1056, 1312
Eco147I AGGCCT 1 cut(s) 386
Eco31I GGTCTC 1 cut(s) 1946
Eco32I GATATC 1 cut(s) 1363
Eco47I GGWCC 3 cut(s) 1203, 1368, 1708
Eco57I CTGAAG 6 cut(s) 662, 1347, 1815, 2166, 2254, 2310
Eco72I CACGTG 1 cut(s) 834
EcoRI GAATTC 1 cut(s) 932
EcoRII CCWGG 1 cut(s) 302
EcoRV GATATC 1 cut(s) 1363
EcoT14I CCWWGG 2 cut(s) 1056, 1312
EcoT22I ATGCAT 3 cut(s) 1646, 1762, 2017
ErhI CCWWGG 2 cut(s) 1056, 1312
FalI AAGNNNNNCTT 4 cut(s) 371, 403, 2490, 2522
FauI CCCGC 2 cut(s) 202, 511
Fnu4HI GCNGC 9 cut(s) 33, 36, 259, 839, 1050, 1350, 1475, 2311, 2357
FokI GGATG 9 cut(s) 29, 330, 635, 711, 902, 1039, 1403, 1496, 1894
Fsp4HI GCNGC 9 cut(s) 33, 36, 259, 839, 1050, 1350, 1475, 2311, 2357
FspBI CTAG 6 cut(s) 206, 1313, 1442, 1730, 2027, 2528
GluI GCNGC 9 cut(s) 33, 36, 259, 839, 1050, 1350, 1475, 2311, 2357
GsaI CCCAGC 2 cut(s) 543, 1516
GsuI CTGGAG 4 cut(s) 164, 286, 1928, 2399
HaeIII GGCC 6 cut(s) 5, 69, 386, 628, 2020, 2165
HapII CCGG 9 cut(s) 27, 194, 438, 560, 693, 1146, 1566, 2216, 2543
HgaI GACGC 1 cut(s) 109
HindIII AAGCTT 2 cut(s) 576, 1980
HpaII CCGG 9 cut(s) 27, 194, 438, 560, 693, 1146, 1566, 2216, 2543
HphI GGTGA 8 cut(s) 248, 508, 514, 1420, 2107, 2312, 2411, 2557
Hpy166II GTNNAC 7 cut(s) 129, 283, 1385, 1499, 1628, 1860, 2038
Hpy188I TCNGA 7 cut(s) 910, 976, 1231, 1256, 1746, 1834, 2552
Hpy8I GTNNAC 7 cut(s) 129, 283, 1385, 1499, 1628, 1860, 2038
HpyAV CCTTC 7 cut(s) 854, 1459, 1642, 1789, 1839, 2504, 2587
HpyCH4IV ACGT 2 cut(s) 108, 833
HpyF10VI GCNNNNNNNGC 8 cut(s) 11, 32, 584, 1522, 1531, 1927, 2072, 2356
HpyF3I CTNAG 7 cut(s) 1228, 1306, 1526, 1722, 2108, 2186, 2203
HpySE526I ACGT 2 cut(s) 108, 833
LmnI GCTCC 6 cut(s) 145, 276, 463, 694, 1679, 2380
Lsp1109I GCAGC 8 cut(s) 19, 22, 825, 1061, 1336, 1461, 2322, 2343
LweI GCATC 7 cut(s) 7, 543, 1061, 1905, 2121, 2229, 2523
MaeI CTAG 6 cut(s) 206, 1313, 1442, 1730, 2027, 2528
MaeII ACGT 2 cut(s) 108, 833
MaeIII GTNAC 7 cut(s) 496, 607, 791, 961, 1456, 1507, 1807
MbiI CCGCTC 1 cut(s) 689
MfeI CAATTG 1 cut(s) 1931
MflI RGATCY 2 cut(s) 181, 971
MhlI GDGCHC 2 cut(s) 60, 246
MlsI TGGCCA 3 cut(s) 5, 2020, 2165
MluNI TGGCCA 3 cut(s) 5, 2020, 2165
MlyI GAGTC 5 cut(s) 753, 905, 1185, 1220, 1382
MmeI TCCRAC 4 cut(s) 324, 595, 626, 2587
Mox20I TGGCCA 3 cut(s) 5, 2020, 2165
Mph1103I ATGCAT 3 cut(s) 1646, 1762, 2017
MroXI GAANNNNTTC 2 cut(s) 653, 1242
MscI TGGCCA 3 cut(s) 5, 2020, 2165
MslI CAYNNNNRTG 2 cut(s) 832, 2014
Msp20I TGGCCA 3 cut(s) 5, 2020, 2165
MspA1I CMGCKG 2 cut(s) 14, 1474
MspCI CTTAAG 1 cut(s) 2314
MspI CCGG 9 cut(s) 27, 194, 438, 560, 693, 1146, 1566, 2216, 2543
MspR9I CCNGG 6 cut(s) 28, 194, 304, 693, 1566, 2217
MunI CAATTG 1 cut(s) 1931
MvaI CCWGG 1 cut(s) 304
MwoI GCNNNNNNNGC 8 cut(s) 11, 32, 584, 1522, 1531, 1927, 2072, 2356
NciI CCSGG 5 cut(s) 28, 194, 693, 1566, 2217
NlaIV GGNNCC 2 cut(s) 801, 2231
NmeAIII GCCGAG 1 cut(s) 533
NmuCI GTSAC 4 cut(s) 496, 961, 1456, 1807
NsiI ATGCAT 3 cut(s) 1646, 1762, 2017
NspI RCATGY 1 cut(s) 2015
NspV TTCGAA 2 cut(s) 527, 1848
OliI CACNNNNGTG 1 cut(s) 832
PceI AGGCCT 1 cut(s) 386
PdmI GAANNNNTTC 2 cut(s) 653, 1242
PfeI GAWTC 6 cut(s) 137, 426, 431, 1219, 1338, 2092
PflFI GACNNNGTC 1 cut(s) 1372
PflMI CCANNNNNTGG 3 cut(s) 989, 1620, 1774
PfoI TCCNGGA 2 cut(s) 302, 691
PinAI ACCGGT 1 cut(s) 437
PkrI GCNGC 9 cut(s) 34, 37, 260, 840, 1051, 1351, 1476, 2312, 2358
PleI GAGTC 5 cut(s) 752, 905, 1185, 1220, 1381
PmaCI CACGTG 1 cut(s) 834
PmlI CACGTG 1 cut(s) 834
PpsI GAGTC 5 cut(s) 752, 905, 1185, 1220, 1381
Ppu21I YACGTR 1 cut(s) 834
PsiI TTATAA 1 cut(s) 1589
Psp6I CCWGG 1 cut(s) 302
PspCI CACGTG 1 cut(s) 834
PspFI CCCAGC 2 cut(s) 539, 1512
PspGI CCWGG 1 cut(s) 302
PspN4I GGNNCC 2 cut(s) 801, 2231
PspPI GGNCC 4 cut(s) 626, 1203, 1368, 1708
PsrI GAACNNNNNNTAC 4 cut(s) 83, 115, 1710, 1742
PstI CTGCAG 2 cut(s) 40, 1479
PstNI CAGNNNCTG 3 cut(s) 593, 1235, 1721
PsuI RGATCY 2 cut(s) 181, 971
PsyI GACNNNGTC 1 cut(s) 1372
PvuII CAGCTG 1 cut(s) 1474
RsaI GTAC 9 cut(s) 284, 293, 299, 591, 768, 1800, 1861, 2197, 2456
RsaNI GTAC 9 cut(s) 283, 292, 298, 590, 767, 1799, 1860, 2196, 2455
RseI CAYNNNNRTG 2 cut(s) 832, 2014
SatI GCNGC 9 cut(s) 33, 36, 259, 839, 1050, 1350, 1475, 2311, 2357
Sau96I GGNCC 4 cut(s) 626, 1203, 1368, 1708
ScaI AGTACT 1 cut(s) 299
SchI GAGTC 5 cut(s) 753, 905, 1185, 1220, 1382
ScrFI CCNGG 6 cut(s) 28, 194, 304, 693, 1566, 2217
SduI GDGCHC 2 cut(s) 60, 246
SfaNI GCATC 7 cut(s) 7, 543, 1061, 1905, 2121, 2229, 2523
SfcI CTRYAG 6 cut(s) 36, 227, 491, 1170, 1475, 1492
SfuI TTCGAA 2 cut(s) 527, 1848
SinI GGWCC 3 cut(s) 1203, 1368, 1708
SmiMI CAYNNNNRTG 2 cut(s) 832, 2014
SmlI CTYRAG 5 cut(s) 71, 2234, 2314, 2341, 2587
SmoI CTYRAG 5 cut(s) 71, 2234, 2314, 2341, 2587
SseBI AGGCCT 1 cut(s) 386
SsiI CCGC 6 cut(s) 14, 209, 258, 518, 687, 1161
SspI AATATT 2 cut(s) 1972, 2488
SspMI CTAG 6 cut(s) 206, 1313, 1442, 1730, 2027, 2528
StuI AGGCCT 1 cut(s) 386
StyD4I CCNGG 6 cut(s) 26, 192, 302, 691, 1564, 2215
StyI CCWWGG 2 cut(s) 1056, 1312
TaiI ACGT 2 cut(s) 111, 836
TaqI TCGA 8 cut(s) 135, 429, 434, 527, 1217, 1848, 2222, 2517
TaqII GACCGA 1 cut(s) 1385
TatI WGTACW 7 cut(s) 282, 291, 297, 766, 1859, 2195, 2454
TauI GCSGC 1 cut(s) 261
TfiI GAWTC 6 cut(s) 137, 426, 431, 1219, 1338, 2092
TscAI CASTG 5 cut(s) 58, 1392, 1501, 2089, 2436
TseFI GTSAC 4 cut(s) 496, 961, 1456, 1807
TseI GCWGC 8 cut(s) 32, 35, 838, 1049, 1349, 1474, 2310, 2356
Tsp45I GTSAC 4 cut(s) 496, 961, 1456, 1807
TspDTI ATGAA 9 cut(s) 350, 662, 1031, 1046, 1308, 1407, 1661, 1951, 2084
TspRI CASTG 5 cut(s) 58, 1392, 1501, 2089, 2436
Tth111I GACNNNGTC 1 cut(s) 1372
Van91I CCANNNNNTGG 3 cut(s) 989, 1620, 1774
Vha464I CTTAAG 1 cut(s) 2314
VpaK11BI GGWCC 3 cut(s) 1203, 1368, 1708
XapI RAATTY 6 cut(s) 932, 977, 1738, 1843, 1870, 2492
XceI RCATGY 1 cut(s) 2015
XmaJI CCTAGG 1 cut(s) 1312
XmnI GAANNNNTTC 2 cut(s) 653, 1242
XspI CTAG 6 cut(s) 206, 1313, 1442, 1730, 2027, 2528
ZrmI AGTACT 1 cut(s) 299
Zsp2I ATGCAT 3 cut(s) 1646, 1762, 2017
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.