Rh2BG178200

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0000039
Physical Location & Seq
Forward (+)
15861229 .. 15865215
3987 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG178200.1

Sequence Viewer

Length: 1809 bp
ATGGAAGTGGTTACCACAATTGTAGGGGCTGCTCTAGGAGCAGCGTTCCAGCAGCTCTTTGATAGTGTTATAAAGGCTAACAGAAAAGCTACAATGTTTGATTCCGTCTTCAGGGATCTCGATCTCACGCTCCGGTCTTATCAAGAATTGGTTAAAGATATAGAACAAGTTGAAAATTTTCAACCCTTGCCGGGCCTGCTAGATGATTTAAAAACGAAGATGGAGGAGGGCAGACAGCTTGTTGACAAGTGCTCCAAGTTGAAGATTGATTGCTTCAAAAAGAGAAATGTTGGAAAACTTCGTGCATTGGATGAATCTCTTAACCGACTCTTCCGCATATTGAAATTGCAAGTAGACCACAATCTGAGGAACAGGTTAAGCAATTTGCAGAGGTCGGTGGACCAAATTGATAGGAACCTGGTGGCGCAAAACCGAACTGAAAATCACATTAGAGGTTGGTGCGTGGTACCTAATCCTCCGACATTTACTGTTGGATTGGATGAGCCTTTGAAGGATTTGAAGATGAAGTTTCTAAATGATGATCAAGTGTCAATGCTCGTGCTCACTGCTCCTGGAGGATGCGGGAAAACCACTTTGGCACAGATGTTCTGTCGAGATGAGGAAGTCAAAGAAAAATTCAAGAAGAATATTTTCTTTGTCACTGTTTCGAAAAAGCCCAACTTGGACCGTATTGTAGCAGAAATGTGCCAGAGAACTGGATCCCAAGTACCTGCGTTCCAGAATGAAGCAAATGCACTCTGCTGGCTGCAAGAATTTTTGACAGAAACAGGACAAAATCCTCTACTTTTGGTCTTGGATGATGTTTGGGATGGCTCTTCAGAATCCCTGTTGCTTGATAAGTGTCATGAATTCAAAAATCCAAATTACAAGATTTTGGTGACTTCCAGATTTCAGTTTCAAAGATTTTGTTCTTCATATGAATTAAGTCTACTAAATGATAACGATGCAATGTCCCTTTTTCGTGATACAACATGGTTGGGAGATAGCGAGTCTGTTATCCCAAAAGATCTGGTGACAAAGATTGTAGAGCTCTGTAAAGGATTTCCACTAGCCATTTCAGTGATCGGAAAACAGCTTCGCAACCAACCAGCTGAGATCTGGGAAAGAAGAGTGACAGAGTTATCTAAAGGTTCTTCCATTCTTGATTCTACGAAATTGCTGCTTGATAGACTACAGAGCAGCCTAGATGCCTTGGATAAAGATGTCAAGGATTATTTCTTAGACCTCGGTTCATTTCCTGAAGACCGAAGAGTCCCAGCTGCTACCCTCATTGACATGTGGTCAGAGTTGTATGGCCTAGATTTGGATTATTTGTCCATTGCTGCCCTGCACGATCTCAGCAGCCGCAGTCTAGCCAATCTCATAGTCATAAGGAATGCAAAGGAGGATGCGAATGGCTACTATAATGAACACTTTGTTACCCAGCATGATATACTTAGGGACCTGGCTATCCATCAGACTGGTCATGACCCAACAGGACATAGCAAAAGGCTGAATATATGCGAAGATGATATTCCTAAATGGTGGTCTGAACATAAGCAGAAACCCAAGAAGACGCGCTTATTATCCATCTCAACCGATGGGGCGTTTTCATCAAAATGGCACAACATGAATCTGCCGAAAGCTGAGGTTCTGGTTTTGAATTTTCAGACAAAGAACTATGCCTTTCCCAAATTCAGGAAGATGTCGAAGTCGTTGAAGGTTCTAATAGTCACAAATTATGGTGTCATACCAGCTGAAGTGAGTAACTTTAACTGGACGGCTCACGAGGTTTCATCAGCTAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
NB-ARC RPW8

Protein Analysis

602

Amino Acids

68.72

Weight (kDa)

6.87

Isoelectric Point (pI)

37.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RPW8 PF05659 7 - 122 2e-21 Arabidopsis broad-spectrum mildew resistance protein RPW8
NB-ARC PF00931 170 - 332 7.8e-15 NB-ARC domain
AAA_22 PF13401 184 - 275 5.3e-07 AAA domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 71
AasI GACNNNNNNGTC 1 cut(s) 1271
Acc36I ACCTGC 1 cut(s) 739
Acc65I GGTACC 1 cut(s) 466
AccB1I GGYRCC 1 cut(s) 466
AccI GTMKAC 2 cut(s) 354, 949
AccII CGCG 1 cut(s) 1579
AciI CCGC 3 cut(s) 334, 582, 1366
AclWI GGATC 3 cut(s) 123, 714, 727
AcsI RAATTY 6 cut(s) 175, 635, 773, 869, 1663, 1694
AcuI CTGAAG 4 cut(s) 94, 822, 1281, 1779
AfaI GTAC 2 cut(s) 468, 729
AfiI CCNNNNNNNGG 4 cut(s) 111, 191, 1324, 1698
AflIII ACRYGT 1 cut(s) 1296
AhdI GACNNNNNGTC 1 cut(s) 1300
AjnI CCWGG 3 cut(s) 417, 571, 1464
AjuI GAANNNNNNNTTGG 2 cut(s) 578, 610
Alw21I GWGCWC 3 cut(s) 254, 564, 1053
AlwI GGATC 3 cut(s) 123, 714, 727
AoxI GGCC 2 cut(s) 193, 1315
ApeKI GCWGC 9 cut(s) 29, 41, 52, 766, 1180, 1200, 1280, 1343, 1362
ApoI RAATTY 6 cut(s) 175, 635, 773, 869, 1663, 1694
Asp700I GAANNNNTTC 2 cut(s) 177, 650
Asp718I GGTACC 1 cut(s) 466
AspLEI GCGC 2 cut(s) 427, 1581
AspS9I GGNCC 4 cut(s) 193, 400, 685, 1462
AsuC2I CCSGG 1 cut(s) 192
AsuHPI GGTGA 2 cut(s) 910, 1045
AsuII TTCGAA 1 cut(s) 668
AvaII GGWCC 3 cut(s) 400, 685, 1462
BamHI GGATCC 1 cut(s) 719
BanI GGYRCC 1 cut(s) 466
BanII GRGCYC 1 cut(s) 1053
BauI CACGAG 2 cut(s) 557, 1787
BbsI GAAGAC 3 cut(s) 100, 1269, 1580
Bbv12I GWGCWC 3 cut(s) 254, 564, 1053
BbvCI CCTCAGC 1 cut(s) 1647
BbvI GCAGC 9 cut(s) 16, 53, 64, 753, 1167, 1212, 1267, 1330, 1374
BccI CCATC 5 cut(s) 214, 824, 1482, 1595, 1598
BceAI ACGGC 1 cut(s) 1797
BcgI CGANNNNNNTGC 2 cut(s) 1162, 1196
BciT130I CCWGG 3 cut(s) 419, 573, 1466
BclI TGATCA 1 cut(s) 541
BcnI CCSGG 1 cut(s) 192
BfaI CTAG 6 cut(s) 35, 200, 1070, 1205, 1319, 1373
BfmI CTRYAG 1 cut(s) 1193
BfuAI ACCTGC 1 cut(s) 739
BglII AGATCT 2 cut(s) 1027, 1116
Bme1390I CCNGG 4 cut(s) 192, 419, 573, 1466
Bme18I GGWCC 3 cut(s) 400, 685, 1462
BmeRI GACNNNNNGTC 1 cut(s) 1300
BmgT120I GGNCC 4 cut(s) 193, 400, 685, 1462
BmiI GGNNCC 4 cut(s) 416, 468, 721, 1463
BmrFI CCNGG 4 cut(s) 192, 419, 573, 1466
BmsI GCATC 4 cut(s) 569, 955, 1198, 1399
BpiI GAAGAC 3 cut(s) 100, 1269, 1580
BpmI CTGGAG 1 cut(s) 594
Bpu10I CCTNAGC 1 cut(s) 1647
Bpu14I TTCGAA 1 cut(s) 668
BpuMI CCSGG 1 cut(s) 192
BsaBI GATNNNNATC 1 cut(s) 120
BsaJI CCNNGG 2 cut(s) 1212, 1246
BsaWI WCCGGW 1 cut(s) 132
BsaXI ACNNNNNCTCC 2 cut(s) 236, 266
Bsc4I CCNNNNNNNGG 4 cut(s) 111, 191, 1324, 1698
Bse1I ACTGG 3 cut(s) 721, 1486, 1781
Bse3DI GCAATG 2 cut(s) 975, 1338
Bse8I GATNNNNATC 1 cut(s) 120
BseBI CCWGG 3 cut(s) 419, 573, 1466
BseDI CCNNGG 2 cut(s) 1212, 1246
BseGI GGATG 6 cut(s) 316, 505, 584, 823, 835, 1414
BseJI GATNNNNATC 1 cut(s) 120
BseLI CCNNNNNNNGG 4 cut(s) 111, 191, 1324, 1698
BseMI GCAATG 2 cut(s) 975, 1338
BseMII CTCAG 4 cut(s) 356, 1104, 1372, 1638
BseNI ACTGG 3 cut(s) 721, 1486, 1781
BseRI GAGGAG 1 cut(s) 239
BseXI GCAGC 9 cut(s) 16, 53, 64, 753, 1167, 1212, 1267, 1330, 1374
BseYI CCCAGC 2 cut(s) 1276, 1443
BsgI GTGCAG 1 cut(s) 1334
Bsh1236I CGCG 1 cut(s) 1579
BshFI GGCC 2 cut(s) 195, 1317
BshNI GGYRCC 1 cut(s) 466
BsiHKAI GWGCWC 3 cut(s) 254, 564, 1053
BsiSI CCGG 2 cut(s) 133, 191
BslFI GGGAC 3 cut(s) 958, 1259, 1475
BslI CCNNNNNNNGG 4 cut(s) 111, 191, 1324, 1698
BsmFI GGGAC 3 cut(s) 958, 1259, 1475
BsmI GAATGC 1 cut(s) 1402
BsnI GGCC 2 cut(s) 195, 1317
Bsp119I TTCGAA 1 cut(s) 668
Bsp1286I GDGCHC 3 cut(s) 254, 564, 1053
Bsp143I GATC 8 cut(s) 115, 121, 541, 719, 1027, 1083, 1116, 1354
BspACI CCGC 3 cut(s) 334, 582, 1366
BspANI GGCC 2 cut(s) 195, 1317
BspCNI CTCAG 4 cut(s) 357, 1105, 1371, 1639
BspFNI CGCG 1 cut(s) 1579
BspHI TCATGA 2 cut(s) 865, 1486
BspLI GGNNCC 4 cut(s) 416, 468, 721, 1463
BspMI ACCTGC 1 cut(s) 739
BspPI GGATC 3 cut(s) 123, 714, 727
BspQI GCTCTTC 1 cut(s) 841
BspT104I TTCGAA 1 cut(s) 668
BspT107I GGYRCC 1 cut(s) 466
BsrDI GCAATG 2 cut(s) 975, 1338
BsrI ACTGG 3 cut(s) 721, 1486, 1781
BssECI CCNNGG 2 cut(s) 1212, 1246
BssMI GATC 8 cut(s) 115, 121, 541, 719, 1027, 1083, 1116, 1354
BssSI CACGAG 2 cut(s) 557, 1787
BssT1I CCWWGG 1 cut(s) 1212
Bst2BI CACGAG 2 cut(s) 557, 1787
Bst2UI CCWGG 3 cut(s) 419, 573, 1466
Bst4CI ACNGT 3 cut(s) 490, 664, 689
Bst6I CTCTTC 4 cut(s) 335, 841, 1123, 1264
BstBI TTCGAA 1 cut(s) 668
BstC8I GCNNGC 2 cut(s) 197, 764
BstDEI CTNAG 6 cut(s) 365, 1113, 1240, 1358, 1457, 1647
BstEII GGTNACC 1 cut(s) 10
BstF5I GGATG 6 cut(s) 316, 505, 584, 823, 835, 1414
BstFNI CGCG 1 cut(s) 1579
BstHHI GCGC 2 cut(s) 427, 1581
BstKTI GATC 8 cut(s) 118, 124, 544, 722, 1030, 1086, 1119, 1357
BstMBI GATC 8 cut(s) 115, 121, 541, 719, 1027, 1083, 1116, 1354
BstMWI GCNNNNNNNGC 2 cut(s) 38, 196
BstNI CCWGG 3 cut(s) 419, 573, 1466
BstNSI RCATGY 1 cut(s) 1300
BstPI GGTNACC 1 cut(s) 10
BstSCI CCNGG 4 cut(s) 190, 417, 571, 1464
BstSFI CTRYAG 1 cut(s) 1193
BstUI CGCG 1 cut(s) 1579
BstV1I GCAGC 9 cut(s) 16, 53, 64, 753, 1167, 1212, 1267, 1330, 1374
BstV2I GAAGAC 3 cut(s) 100, 1269, 1580
BstX2I RGATCY 4 cut(s) 115, 719, 1027, 1116
BstXI CCANNNNNNTGG 2 cut(s) 716, 1481
BstYI RGATCY 4 cut(s) 115, 719, 1027, 1116
BsuRI GGCC 2 cut(s) 195, 1317
BtsCI GGATG 6 cut(s) 316, 505, 584, 823, 835, 1414
BtsI GCAGTG 1 cut(s) 564
BtsIMutI CAGTG 3 cut(s) 564, 660, 1086
BveI ACCTGC 1 cut(s) 739
Cac8I GCNNGC 2 cut(s) 197, 764
CciI TCATGA 2 cut(s) 865, 1486
CfoI GCGC 2 cut(s) 427, 1581
Cfr13I GGNCC 4 cut(s) 193, 400, 685, 1462
CseI GACGC 1 cut(s) 1585
CsiI ACCWGGT 1 cut(s) 417
Csp6I GTAC 2 cut(s) 467, 728
CviAII CATG 6 cut(s) 866, 993, 1297, 1448, 1487, 1630
CviQI GTAC 2 cut(s) 467, 728
DdeI CTNAG 6 cut(s) 365, 1113, 1240, 1358, 1457, 1647
DpnI GATC 8 cut(s) 117, 123, 543, 721, 1029, 1085, 1118, 1356
DpnII GATC 8 cut(s) 115, 121, 541, 719, 1027, 1083, 1116, 1354
DraI TTTAAA 1 cut(s) 210
DrdI GACNNNNNNGTC 1 cut(s) 1271
DriI GACNNNNNGTC 1 cut(s) 1300
DseDI GACNNNNNNGTC 1 cut(s) 1271
Eam1104I CTCTTC 4 cut(s) 335, 841, 1123, 1264
Eam1105I GACNNNNNGTC 1 cut(s) 1300
EarI CTCTTC 4 cut(s) 335, 841, 1123, 1264
Ecl136II GAGCTC 1 cut(s) 1051
Eco130I CCWWGG 1 cut(s) 1212
Eco24I GRGCYC 1 cut(s) 1053
Eco47I GGWCC 3 cut(s) 400, 685, 1462
Eco53kI GAGCTC 1 cut(s) 1051
Eco57I CTGAAG 4 cut(s) 94, 822, 1281, 1779
Eco91I GGTNACC 1 cut(s) 10
EcoICRI GAGCTC 1 cut(s) 1051
EcoO109I RGGNCCY 1 cut(s) 1462
EcoO65I GGTNACC 1 cut(s) 10
EcoRI GAATTC 1 cut(s) 869
EcoRII CCWGG 3 cut(s) 417, 571, 1464
EcoT14I CCWWGG 1 cut(s) 1212
EcoT38I GRGCYC 1 cut(s) 1053
ErhI CCWWGG 1 cut(s) 1212
FaeI CATG 6 cut(s) 869, 996, 1300, 1451, 1490, 1633
FalI AAGNNNNNCTT 4 cut(s) 665, 697, 1565, 1597
FaqI GGGAC 3 cut(s) 958, 1259, 1475
FatI CATG 6 cut(s) 865, 992, 1296, 1447, 1486, 1629
FauI CCCGC 1 cut(s) 575
FauNDI CATATG 1 cut(s) 937
FbaI TGATCA 1 cut(s) 541
FblI GTMKAC 2 cut(s) 354, 949
FokI GGATG 6 cut(s) 323, 512, 591, 830, 842, 1421
FriOI GRGCYC 1 cut(s) 1053
FspBI CTAG 6 cut(s) 35, 200, 1070, 1205, 1319, 1373
GlaI GCGC 2 cut(s) 426, 1580
GsaI CCCAGC 2 cut(s) 1280, 1447
GsuI CTGGAG 1 cut(s) 594
HaeIII GGCC 2 cut(s) 195, 1317
HapII CCGG 2 cut(s) 133, 191
HgaI GACGC 1 cut(s) 1585
HhaI GCGC 2 cut(s) 427, 1581
Hin1II CATG 6 cut(s) 869, 996, 1300, 1451, 1490, 1633
Hin6I GCGC 2 cut(s) 425, 1579
HinP1I GCGC 2 cut(s) 425, 1579
HincII GTYRAC 1 cut(s) 244
HindII GTYRAC 1 cut(s) 244
HinfI GANTC 8 cut(s) 101, 314, 327, 842, 1010, 1166, 1272, 1633
HpaII CCGG 2 cut(s) 133, 191
HphI GGTGA 2 cut(s) 910, 1045
Hpy166II GTNNAC 4 cut(s) 244, 355, 400, 950
Hpy188I TCNGA 8 cut(s) 366, 480, 841, 1088, 1306, 1479, 1552, 1671
Hpy8I GTNNAC 4 cut(s) 244, 355, 400, 950
HpyAV CCTTC 2 cut(s) 505, 1714
HpyCH4III ACNGT 3 cut(s) 490, 664, 689
HpyCH4V TGCA 8 cut(s) 305, 349, 388, 755, 769, 968, 1351, 1400
HpyF10VI GCNNNNNNNGC 2 cut(s) 38, 196
HpyF3I CTNAG 6 cut(s) 365, 1113, 1240, 1358, 1457, 1647
Hsp92II CATG 6 cut(s) 869, 996, 1300, 1451, 1490, 1633
HspAI GCGC 2 cut(s) 425, 1579
KpnI GGTACC 1 cut(s) 470
Ksp22I TGATCA 1 cut(s) 541
Kzo9I GATC 8 cut(s) 115, 121, 541, 719, 1027, 1083, 1116, 1354
LguI GCTCTTC 1 cut(s) 841
LmnI GCTCC 4 cut(s) 38, 135, 257, 574
Lsp1109I GCAGC 9 cut(s) 16, 53, 64, 753, 1167, 1212, 1267, 1330, 1374
LweI GCATC 4 cut(s) 569, 955, 1198, 1399
MabI ACCWGGT 1 cut(s) 417
MaeI CTAG 6 cut(s) 35, 200, 1070, 1205, 1319, 1373
MaeIII GTNAC 8 cut(s) 10, 658, 898, 1033, 1132, 1438, 1732, 1766
MalI GATC 8 cut(s) 117, 123, 543, 721, 1029, 1085, 1118, 1356
MboI GATC 8 cut(s) 115, 121, 541, 719, 1027, 1083, 1116, 1354
MfeI CAATTG 1 cut(s) 18
MflI RGATCY 4 cut(s) 115, 719, 1027, 1116
MhlI GDGCHC 3 cut(s) 254, 564, 1053
MlyI GAGTC 3 cut(s) 321, 1019, 1281
MmeI TCCRAC 3 cut(s) 271, 472, 503
MroXI GAANNNNTTC 2 cut(s) 177, 650
MseI TTAA 7 cut(s) 153, 209, 321, 377, 944, 1773, 1807
MslI CAYNNNNRTG 3 cut(s) 1079, 1295, 1618
MspA1I CMGCKG 3 cut(s) 1112, 1280, 1757
MspI CCGG 2 cut(s) 133, 191
MspR9I CCNGG 4 cut(s) 192, 419, 573, 1466
MunI CAATTG 1 cut(s) 18
Mva1269I GAATGC 1 cut(s) 1402
MvaI CCWGG 3 cut(s) 419, 573, 1466
MvnI CGCG 1 cut(s) 1579
MwoI GCNNNNNNNGC 2 cut(s) 38, 196
NciI CCSGG 1 cut(s) 192
NdeI CATATG 1 cut(s) 937
NdeII GATC 8 cut(s) 115, 121, 541, 719, 1027, 1083, 1116, 1354
NlaIII CATG 6 cut(s) 869, 996, 1300, 1451, 1490, 1633
NlaIV GGNNCC 4 cut(s) 416, 468, 721, 1463
NmuCI GTSAC 5 cut(s) 658, 898, 1033, 1132, 1732
NspI RCATGY 1 cut(s) 1300
NspV TTCGAA 1 cut(s) 668
PagI TCATGA 2 cut(s) 865, 1486
PciI ACATGT 1 cut(s) 1296
PciSI GCTCTTC 1 cut(s) 841
PctI GAATGC 1 cut(s) 1402
PdmI GAANNNNTTC 2 cut(s) 177, 650
PfeI GAWTC 5 cut(s) 101, 314, 842, 1166, 1633
PfoI TCCNGGA 1 cut(s) 571
PleI GAGTC 3 cut(s) 321, 1018, 1280
PpsI GAGTC 3 cut(s) 321, 1018, 1280
PpuMI RGGWCCY 1 cut(s) 1462
PscI ACATGT 1 cut(s) 1296
PsiI TTATAA 1 cut(s) 71
Psp124BI GAGCTC 1 cut(s) 1053
Psp5II RGGWCCY 1 cut(s) 1462
Psp6I CCWGG 3 cut(s) 417, 571, 1464
PspEI GGTNACC 1 cut(s) 10
PspFI CCCAGC 2 cut(s) 1276, 1443
PspGI CCWGG 3 cut(s) 417, 571, 1464
PspN4I GGNNCC 4 cut(s) 416, 468, 721, 1463
PspPI GGNCC 4 cut(s) 193, 400, 685, 1462
PspPPI RGGWCCY 1 cut(s) 1462
PsuI RGATCY 4 cut(s) 115, 719, 1027, 1116
PvuII CAGCTG 3 cut(s) 1112, 1280, 1757
RsaI GTAC 2 cut(s) 468, 729
RsaNI GTAC 2 cut(s) 467, 728
RseI CAYNNNNRTG 3 cut(s) 1079, 1295, 1618
SacI GAGCTC 1 cut(s) 1053
SapI GCTCTTC 1 cut(s) 841
SaqAI TTAA 7 cut(s) 153, 209, 321, 377, 944, 1773, 1807
Sau3AI GATC 8 cut(s) 115, 121, 541, 719, 1027, 1083, 1116, 1354
Sau96I GGNCC 4 cut(s) 193, 400, 685, 1462
SchI GAGTC 3 cut(s) 321, 1019, 1281
ScrFI CCNGG 4 cut(s) 192, 419, 573, 1466
SduI GDGCHC 3 cut(s) 254, 564, 1053
SexAI ACCWGGT 1 cut(s) 417
SfaNI GCATC 4 cut(s) 569, 955, 1198, 1399
SfcI CTRYAG 1 cut(s) 1193
SfuI TTCGAA 1 cut(s) 668
SinI GGWCC 3 cut(s) 400, 685, 1462
SmiMI CAYNNNNRTG 3 cut(s) 1079, 1295, 1618
SsiI CCGC 3 cut(s) 334, 582, 1366
SspI AATATT 1 cut(s) 649
SspMI CTAG 6 cut(s) 35, 200, 1070, 1205, 1319, 1373
SstI GAGCTC 1 cut(s) 1053
StyD4I CCNGG 4 cut(s) 190, 417, 571, 1464
StyI CCWWGG 1 cut(s) 1212
TaaI ACNGT 3 cut(s) 490, 664, 689
TaqI TCGA 4 cut(s) 120, 613, 668, 1709
TaqII GACCGA 1 cut(s) 1281
TauI GCSGC 1 cut(s) 1368
TfiI GAWTC 5 cut(s) 101, 314, 842, 1166, 1633
Tru1I TTAA 7 cut(s) 153, 209, 321, 377, 944, 1773, 1807
Tru9I TTAA 7 cut(s) 153, 209, 321, 377, 944, 1773, 1807
TscAI CASTG 3 cut(s) 571, 667, 1086
TseFI GTSAC 5 cut(s) 658, 898, 1033, 1132, 1732
TseI GCWGC 9 cut(s) 29, 41, 52, 766, 1180, 1200, 1280, 1343, 1362
Tsp45I GTSAC 5 cut(s) 658, 898, 1033, 1132, 1732
TspGWI ACGGA 1 cut(s) 94
TspRI CASTG 3 cut(s) 571, 667, 1086
VpaK11BI GGWCC 3 cut(s) 400, 685, 1462
XapI RAATTY 6 cut(s) 175, 635, 773, 869, 1663, 1694
XceI RCATGY 1 cut(s) 1300
XcmI CCANNNNNNNNNTGG 1 cut(s) 1116
XmiI GTMKAC 2 cut(s) 354, 949
XmnI GAANNNNTTC 2 cut(s) 177, 650
XspI CTAG 6 cut(s) 35, 200, 1070, 1205, 1319, 1373
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.