pycom15g23980

disease resistance

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Forward (+)
18137191 .. 18139120
1930 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g23980.2

Sequence Viewer

Length: 1206 bp
ATGTGTGTGGCTTCGGCCGGAATGGGTGCTCGGAGAACGTCATTTCAACTGCTGTTTGATGCTGTAAAATCAGTGCAGGAGGAGAATACAATGTTCCAACACATCCTCGGAGACATCAAATCCACACTGGACTCTCTACAACCTCTCATCAAAGACATCGAAGAGTATAACTCGAAAGAGGGACTGCAAAATTATGCAATACAGATGGAGGAAGGAGCAAAGCTTGTTCATAAGTGCAGCAAAGTTGGCGTGTGGAGAAAACACACATACACCAAGAAGCTTCACCAACTGGATAAATCTCTTCGAAGAGTGTTTGATGTGCTTAAACTGCAGGGTATGAGGGATGCGAGGGAGACGTCGGTTTCTTTGAGGAATATCGAGACGGTGCTTTCTCGAATAGAAGAGAGTTTGAAGATAAAAACTAATCAGCCTGAAATGATTAAATGTTCGTCTGCAGTGCCTGAACCGCCATCCGTTACAGTCGGGTTGGATTTGCCGTTGAAGGAGTTGAAGATGAAGCTCCTTAAGGATGAAAAGGTGTCTATGCTTGTGCTGACTGCTGCTGGAGGATGTGGGAAAACCACCTTGGCTAAAATGTTTTGTCAAGATCAAGAAGTCAAGGATACATTCAAGAATAACATCTTCTTTGTCAATGTCTCGAAAAAGCCCAACTTGGACCTTATTGTACACCAACTATATCAACGGAAGGGGTCCGAGCTGCCTGCTTTCGAAAACGAAGTCATGGCAGCAAACTGGTTGCAACAATTTCTGAAGGAATCAAGACAAAATCCTCTACTGTTTGTCCTGGATGATGTTTGGTCAGGATCAGAGTCCCTTCTTGAGAAGTTTGATCAATTCAAGTTTTCAAATTACAAGATTTTGGTCACATCAAGATTTGCATTTCCAAGATTCGGTTCTCCTTATCATTTGTCACCATTGAATGATGAAGATGCAATGGCTCTTTTTCACTATTCAGCATCCTTGGAGGACAAGAGCTCTTATACTTACGAAGATCTTTCGAGAAAGATTATCAAGCATTGTAAGGGATGCCCACTTGCCATTGCATTGGTCGGGAGATCACTTCGCGGCCAGCCTTTAGAAATCTGGCAGAAAAGAGTTGTAGAATGGTGCAAAGGTTCCTCTATTCTTGATTCTGACAAGGATTTACTTGCTTGCCTCCAAAGCAGCTTTAGATGCCTTGGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

402

Amino Acids

45.59

Weight (kDa)

8.74

Isoelectric Point (pI)

49.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 359
AccII CGCG 1 cut(s) 1086
AciI CCGC 2 cut(s) 467, 1086
AclWI GGATC 1 cut(s) 832
AcoI YGGCCR 2 cut(s) 15, 1087
AcuI CTGAAG 1 cut(s) 791
AcyI GRCGYC 1 cut(s) 356
AfaI GTAC 1 cut(s) 687
AfiI CCNNNNNNNGG 1 cut(s) 911
AflII CTTAAG 1 cut(s) 524
AgsI TTSAA 8 cut(s) 47, 412, 502, 511, 631, 859, 867, 940
AjnI CCWGG 1 cut(s) 804
AjuI GAANNNNNNNTTGG 4 cut(s) 569, 601, 898, 930
AluBI AGCT 6 cut(s) 223, 280, 520, 718, 996, 1188
AluI AGCT 6 cut(s) 223, 280, 520, 718, 996, 1188
Alw21I GWGCWC 2 cut(s) 31, 998
Alw26I GTCTC 4 cut(s) 105, 347, 374, 661
AlwI GGATC 1 cut(s) 832
AlwNI CAGNNNCTG 1 cut(s) 461
AoxI GGCC 2 cut(s) 15, 1087
ApeKI GCWGC 5 cut(s) 237, 560, 718, 746, 1185
ArsI GACNNNNNNTTYG 2 cut(s) 723, 755
AspS9I GGNCC 2 cut(s) 676, 711
AsuHPI GGTGA 2 cut(s) 275, 924
AsuII TTCGAA 2 cut(s) 304, 729
AvaII GGWCC 2 cut(s) 676, 711
BanII GRGCYC 1 cut(s) 998
Bbv12I GWGCWC 2 cut(s) 31, 998
BbvI GCAGC 5 cut(s) 249, 547, 705, 758, 1197
BccI CCATC 2 cut(s) 199, 478
BceAI ACGGC 1 cut(s) 481
BcgI CGANNNNNNTGC 2 cut(s) 704, 738
BciT130I CCWGG 1 cut(s) 806
BciVI GTATCC 1 cut(s) 616
BclI TGATCA 1 cut(s) 850
BcoDI GTCTC 4 cut(s) 105, 347, 374, 661
BfmI CTRYAG 2 cut(s) 329, 453
BfrI CTTAAG 1 cut(s) 524
BfuI GTATCC 1 cut(s) 616
BglII AGATCT 1 cut(s) 1012
BisI GCNGC 6 cut(s) 238, 561, 719, 747, 1087, 1186
BlsI GCNGC 6 cut(s) 239, 562, 720, 748, 1088, 1187
Bme1390I CCNGG 1 cut(s) 806
Bme18I GGWCC 2 cut(s) 676, 711
BmgT120I GGNCC 2 cut(s) 676, 711
BmiI GGNNCC 2 cut(s) 712, 1138
BmrFI CCNGG 1 cut(s) 806
BmsI GCATC 6 cut(s) 49, 334, 940, 986, 1037, 1184
BplI GAGNNNNNCTC 2 cut(s) 155, 187
BpmI CTGGAG 1 cut(s) 585
Bpu14I TTCGAA 2 cut(s) 304, 729
BpuEI CTTGAG 1 cut(s) 860
BsaHI GRCGYC 1 cut(s) 356
BsaJI CCNNGG 4 cut(s) 106, 585, 981, 1198
Bsc4I CCNNNNNNNGG 1 cut(s) 911
Bse1I ACTGG 3 cut(s) 132, 294, 758
Bse3DI GCAATG 2 cut(s) 960, 1059
BseBI CCWGG 1 cut(s) 806
BseDI CCNNGG 4 cut(s) 106, 585, 981, 1198
BseGI GGATG 8 cut(s) 102, 349, 470, 535, 575, 814, 977, 1052
BseLI CCNNNNNNNGG 1 cut(s) 911
BseMI GCAATG 2 cut(s) 960, 1059
BseNI ACTGG 3 cut(s) 132, 294, 758
BseRI GAGGAG 1 cut(s) 95
BseX3I CGGCCG 1 cut(s) 15
BseXI GCAGC 5 cut(s) 249, 547, 705, 758, 1197
BsgI GTGCAG 2 cut(s) 95, 256
Bsh1236I CGCG 1 cut(s) 1086
Bsh1285I CGRYCG 1 cut(s) 18
BshFI GGCC 2 cut(s) 17, 1089
BsiEI CGRYCG 1 cut(s) 18
BsiHKAI GWGCWC 2 cut(s) 31, 998
BsiSI CCGG 1 cut(s) 18
BslFI GGGAC 2 cut(s) 195, 817
BslI CCNNNNNNNGG 1 cut(s) 911
BsmAI GTCTC 4 cut(s) 105, 347, 374, 661
BsmBI CGTCTC 2 cut(s) 347, 374
BsmFI GGGAC 2 cut(s) 195, 817
BsnI GGCC 2 cut(s) 17, 1089
Bsp119I TTCGAA 2 cut(s) 304, 729
Bsp1286I GDGCHC 2 cut(s) 31, 998
Bsp1407I TGTACA 1 cut(s) 685
Bsp143I GATC 5 cut(s) 607, 824, 850, 1012, 1076
BspACI CCGC 2 cut(s) 467, 1086
BspANI GGCC 2 cut(s) 17, 1089
BspFNI CGCG 1 cut(s) 1086
BspLI GGNNCC 2 cut(s) 712, 1138
BspMAI CTGCAG 2 cut(s) 333, 457
BspPI GGATC 1 cut(s) 832
BspT104I TTCGAA 2 cut(s) 304, 729
BspTI CTTAAG 1 cut(s) 524
BsrDI GCAATG 2 cut(s) 960, 1059
BsrGI TGTACA 1 cut(s) 685
BsrI ACTGG 3 cut(s) 132, 294, 758
BssECI CCNNGG 4 cut(s) 106, 585, 981, 1198
BssMI GATC 5 cut(s) 607, 824, 850, 1012, 1076
BssNI GRCGYC 1 cut(s) 356
BssT1I CCWWGG 3 cut(s) 585, 981, 1198
Bst2UI CCWGG 1 cut(s) 806
Bst4CI ACNGT 3 cut(s) 385, 481, 798
Bst6I CTCTTC 4 cut(s) 156, 301, 306, 396
BstACI GRCGYC 1 cut(s) 356
BstAFI CTTAAG 1 cut(s) 524
BstAUI TGTACA 1 cut(s) 685
BstBI TTCGAA 2 cut(s) 304, 729
BstC8I GCNNGC 3 cut(s) 723, 1091, 1174
BstF5I GGATG 8 cut(s) 102, 349, 470, 535, 575, 814, 977, 1052
BstFNI CGCG 1 cut(s) 1086
BstKTI GATC 5 cut(s) 610, 827, 853, 1015, 1079
BstMAI GTCTC 4 cut(s) 105, 347, 374, 661
BstMBI GATC 5 cut(s) 607, 824, 850, 1012, 1076
BstMCI CGRYCG 1 cut(s) 18
BstMWI GCNNNNNNNGC 5 cut(s) 246, 328, 466, 1182, 1194
BstNI CCWGG 1 cut(s) 806
BstSCI CCNGG 1 cut(s) 804
BstSFI CTRYAG 2 cut(s) 329, 453
BstUI CGCG 1 cut(s) 1086
BstV1I GCAGC 5 cut(s) 249, 547, 705, 758, 1197
BstX2I RGATCY 1 cut(s) 1012
BstXI CCANNNNNNTGG 1 cut(s) 1066
BstYI RGATCY 1 cut(s) 1012
BstZI CGGCCG 1 cut(s) 15
BsuI GTATCC 1 cut(s) 616
BsuRI GGCC 2 cut(s) 17, 1089
BtsCI GGATG 8 cut(s) 102, 349, 470, 535, 575, 814, 977, 1052
BtsI GCAGTG 1 cut(s) 462
BtsIMutI CAGTG 3 cut(s) 78, 125, 462
Cac8I GCNNGC 3 cut(s) 723, 1091, 1174
CaiI CAGNNNCTG 1 cut(s) 461
Cfr13I GGNCC 2 cut(s) 676, 711
Csp6I GTAC 1 cut(s) 686
CviAII CATG 1 cut(s) 742
CviQI GTAC 1 cut(s) 686
DpnI GATC 5 cut(s) 609, 826, 852, 1014, 1078
DpnII GATC 5 cut(s) 607, 824, 850, 1012, 1076
EaeI YGGCCR 2 cut(s) 15, 1087
EagI CGGCCG 1 cut(s) 15
Eam1104I CTCTTC 4 cut(s) 156, 301, 306, 396
EarI CTCTTC 4 cut(s) 156, 301, 306, 396
Ecl136II GAGCTC 1 cut(s) 996
EclXI CGGCCG 1 cut(s) 15
Eco130I CCWWGG 3 cut(s) 585, 981, 1198
Eco24I GRGCYC 1 cut(s) 998
Eco47I GGWCC 2 cut(s) 676, 711
Eco52I CGGCCG 1 cut(s) 15
Eco53kI GAGCTC 1 cut(s) 996
Eco57I CTGAAG 1 cut(s) 791
EcoICRI GAGCTC 1 cut(s) 996
EcoRII CCWGG 1 cut(s) 804
EcoT14I CCWWGG 3 cut(s) 585, 981, 1198
EcoT38I GRGCYC 1 cut(s) 998
ErhI CCWWGG 3 cut(s) 585, 981, 1198
Esp3I CGTCTC 2 cut(s) 347, 374
FaeI CATG 1 cut(s) 745
FaiI YATR 9 cut(s) 168, 195, 231, 268, 338, 545, 697, 743, 1002
FalI AAGNNNNNCTT 2 cut(s) 656, 688
FaqI GGGAC 2 cut(s) 195, 817
FatI CATG 1 cut(s) 741
FbaI TGATCA 1 cut(s) 850
Fnu4HI GCNGC 6 cut(s) 238, 561, 719, 747, 1087, 1186
FokI GGATG 8 cut(s) 89, 356, 457, 542, 582, 821, 964, 1059
FriOI GRGCYC 1 cut(s) 998
Fsp4HI GCNGC 6 cut(s) 238, 561, 719, 747, 1087, 1186
GluI GCNGC 6 cut(s) 238, 561, 719, 747, 1087, 1186
GsuI CTGGAG 1 cut(s) 585
HaeIII GGCC 2 cut(s) 17, 1089
HapII CCGG 1 cut(s) 18
Hin1I GRCGYC 1 cut(s) 356
Hin1II CATG 1 cut(s) 745
HindIII AAGCTT 2 cut(s) 221, 278
HinfI GANTC 5 cut(s) 131, 776, 830, 909, 1151
HpaII CCGG 1 cut(s) 18
HphI GGTGA 2 cut(s) 275, 924
Hpy166II GTNNAC 1 cut(s) 688
Hpy188I TCNGA 6 cut(s) 33, 110, 715, 771, 829, 1156
Hpy8I GTNNAC 1 cut(s) 688
Hpy99I CGWCG 1 cut(s) 361
HpyAV CCTTC 5 cut(s) 206, 496, 700, 766, 845
HpyCH4III ACNGT 3 cut(s) 385, 481, 798
HpyCH4IV ACGT 2 cut(s) 38, 356
HpyF10VI GCNNNNNNNGC 5 cut(s) 246, 328, 466, 1182, 1194
HpySE526I ACGT 2 cut(s) 38, 356
Hsp92I GRCGYC 1 cut(s) 356
Hsp92II CATG 1 cut(s) 745
Ksp22I TGATCA 1 cut(s) 850
Kzo9I GATC 5 cut(s) 607, 824, 850, 1012, 1076
LmnI GCTCC 2 cut(s) 215, 525
Lsp1109I GCAGC 5 cut(s) 249, 547, 705, 758, 1197
LweI GCATC 6 cut(s) 49, 334, 940, 986, 1037, 1184
MaeII ACGT 2 cut(s) 38, 356
MaeIII GTNAC 3 cut(s) 475, 883, 930
MalI GATC 5 cut(s) 609, 826, 852, 1014, 1078
MboI GATC 5 cut(s) 607, 824, 850, 1012, 1076
MboII GAAGA 9 cut(s) 173, 293, 318, 413, 424, 523, 634, 959, 1022
MflI RGATCY 1 cut(s) 1012
MhlI GDGCHC 2 cut(s) 31, 998
MluCI AATT 4 cut(s) 190, 764, 854, 868
MlyI GAGTC 2 cut(s) 125, 839
MmeI TCCRAC 2 cut(s) 121, 468
MseI TTAA 3 cut(s) 324, 441, 525
MspCI CTTAAG 1 cut(s) 524
MspI CCGG 1 cut(s) 18
MspR9I CCNGG 1 cut(s) 806
MvaI CCWGG 1 cut(s) 806
MvnI CGCG 1 cut(s) 1086
MwoI GCNNNNNNNGC 5 cut(s) 246, 328, 466, 1182, 1194
NdeII GATC 5 cut(s) 607, 824, 850, 1012, 1076
NlaIII CATG 1 cut(s) 745
NlaIV GGNNCC 2 cut(s) 712, 1138
NmuCI GTSAC 2 cut(s) 883, 930
NspV TTCGAA 2 cut(s) 304, 729
PfeI GAWTC 3 cut(s) 776, 909, 1151
PfoI TCCNGGA 1 cut(s) 804
PkrI GCNGC 6 cut(s) 239, 562, 720, 748, 1088, 1187
PleI GAGTC 2 cut(s) 125, 838
PpsI GAGTC 2 cut(s) 125, 838
Psp124BI GAGCTC 1 cut(s) 998
Psp6I CCWGG 1 cut(s) 804
PspGI CCWGG 1 cut(s) 804
PspN4I GGNNCC 2 cut(s) 712, 1138
PspPI GGNCC 2 cut(s) 676, 711
PstI CTGCAG 2 cut(s) 333, 457
PstNI CAGNNNCTG 1 cut(s) 461
PsuI RGATCY 1 cut(s) 1012
RsaI GTAC 1 cut(s) 687
RsaNI GTAC 1 cut(s) 686
SacI GAGCTC 1 cut(s) 998
SaqAI TTAA 3 cut(s) 324, 441, 525
SatI GCNGC 6 cut(s) 238, 561, 719, 747, 1087, 1186
Sau3AI GATC 5 cut(s) 607, 824, 850, 1012, 1076
Sau96I GGNCC 2 cut(s) 676, 711
SchI GAGTC 2 cut(s) 125, 839
ScrFI CCNGG 1 cut(s) 806
SduI GDGCHC 2 cut(s) 31, 998
SfaNI GCATC 6 cut(s) 49, 334, 940, 986, 1037, 1184
SfcI CTRYAG 2 cut(s) 329, 453
SfuI TTCGAA 2 cut(s) 304, 729
SinI GGWCC 2 cut(s) 676, 711
SmlI CTYRAG 2 cut(s) 524, 839
SmoI CTYRAG 2 cut(s) 524, 839
Sse9I AATT 4 cut(s) 190, 764, 854, 868
SsiI CCGC 2 cut(s) 467, 1086
SstI GAGCTC 1 cut(s) 998
StyD4I CCNGG 1 cut(s) 804
StyI CCWWGG 3 cut(s) 585, 981, 1198
TaaI ACNGT 3 cut(s) 385, 481, 798
TaiI ACGT 2 cut(s) 41, 359
TaqI TCGA 8 cut(s) 159, 173, 304, 378, 394, 659, 729, 1019
TasI AATT 4 cut(s) 190, 764, 854, 868
TatI WGTACW 1 cut(s) 685
TauI GCSGC 1 cut(s) 1089
TfiI GAWTC 3 cut(s) 776, 909, 1151
Tru1I TTAA 3 cut(s) 324, 441, 525
Tru9I TTAA 3 cut(s) 324, 441, 525
TscAI CASTG 3 cut(s) 78, 132, 462
TseFI GTSAC 2 cut(s) 883, 930
TseI GCWGC 5 cut(s) 237, 560, 718, 746, 1185
Tsp45I GTSAC 2 cut(s) 883, 930
TspDTI ATGAA 4 cut(s) 218, 530, 546, 960
TspGWI ACGGA 2 cut(s) 463, 718
TspRI CASTG 3 cut(s) 78, 132, 462
Vha464I CTTAAG 1 cut(s) 524
VpaK11BI GGWCC 2 cut(s) 676, 711
ZraI GACGTC 1 cut(s) 357
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.