Rh2CG176500
ERF Family

belongs to the protein kinase superfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0000039
Physical Location & Seq
Forward (+)
16181396 .. 16185737
4342 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG176500.1

Sequence Viewer

Length: 2487 bp
ATGTCCAGACGTGTCGAGTGTGGTATAGCACAAAATAAAATTCAAACCGAAGGTTGGTGTCCTGTACCTGTGCCTTCTTCGCTCACTATGGGATTAGATGTCCTCAACGTGTGGGGAGCAATGAAGATGGATGAGAAATTGACTTCAGAAGTGAGGGTCAAGCAAATTGAAGGGAGTGATGTGGTGAAAAAACAACTTGGAATTAAAGGGATATCCGGGAATCACAGCAGGAACAACATAGTTTCCAATGCGAGCAGCAGTGCAGGAGGAAGTCAATTGTTGAAGGCAGCAGAGACAGATGAGTCGCAGACTGATGAGCAAAGTTTGGAGACATTTGTCTTAAGACGTTTCAATTTTGAAGAGTTGAATGTTGCTACTGGGAATTTCAGGTCAGATGGAATAATTGGTAGGGGGCCCTTTGGTAACATTTTCAAGGGTTGGGTGGATGAGAAGACGCTTGCACCTTCTAAGGTTGGCTTTGGAATGCCTGTTGCTGTCAAGAAACTGAATCCAGAAAGAGTGCTAGATTTTGAAGAGTGGCAGTCAGAGTTGAACTTTCGAGGAAGGACTTCTCACCCCAACCTTGTAAAGCTATTGGGTTACTGTCGTGAGGAAAAGGAGATGCTCTTTGTTTATGATTTCATGCCTAATGGAAGCTTGGAAGATCATTTTCATAGAAGGAGCCCTGGCATTGAAACACTACCTTGGAACTACAGACTCGATGCAGCTTTTGGCATGGAACCCCTATCTTGGAACAAAAGACTGGATATAGCTTCTGGAGTAGCTCAAGCCCTAGCCTACTTGCATACTTTTTCACCTAATCAAATTGTCCACAGTGACCTTAAGGCCTCAAATATCTTGCTTGATAGGAATTACAATGCAAAACTCTCAAATTTTGGATTAGAAAGACTTGGGAAAACTGGTGAACTGTCACATCAATCAACTCGCTTTGTAGGAACATCTCCTTATATTGATCCAAAGGAAATTACAACAGGTCATTCTTATGTAAAGAGCGATGTTTATAGGTTTGGTGTTACACTACTTCAGTTGCTGACAGGGTTAAAGACCACTGATAGAAATCGTCCCAGCGAACGGCAAAATCTGGGGTTAAAGACCACTGATAGAAATTGTCCCAGCGAACGGCAAAATCTGGTTGAATGGGGTAAACCACTACTCTTGAATGAGAGAAATTTGAAAACCATCATGGACGTGCGGATAGAGGGCCAATATTCCTCCAAGGCAGCATTTCAAGTAGCACAACTTACTCTAAAATGCCTAGCATTGGATCCCAAAAGCCGACCTTCCACGACAGAAGTTGTGGAAGAACTGGAACAAATTCAGGCAATAGAGGAAAGAACTTTAAACACCAGTATGCCCAGCAGTGAGTGCCGGAGGAACATAGATTCGAACACTAGCAGTGGCGGAGGAACAAGTGTATTCTCGGAGGGAAAAACATCAACATTTCAAAGCAAAGATGATGATCAGTCAATTGATGGCCATATTTCAGAGACATCCAACTTGAGAGTTTTCAGTTTTGCAGAGTTGAAGACTGCGACAAGGAATTTCAGGGCAGACACAATGCTTGGTGAGGGAGGTTTTGGGATTGTATTCAAGGGCTGGTTGGATGAAACGTCGGTTTCACCTTCTAAAGCTGGCACTGGAATGATGATTGCTATCAAGAAACTGAAAGCAGAAAGTTTTCAAGGCTTTAAAGAGTGGCAGGCAGAGGTGAACTTTGTAGGAAGGCTTTCTCATCCCAACCTTGTGAAGCTGTTGGGATACTGTTGGGAAGATAAGGAGTTACTCCTTGTTTATGAGTTCATGAGCAGAGGAAGCTTGGAGAATCATCTTTTCAGACGGAATCCAAACTTTGAACCGCTATGTTGGGAAAAAAGAATCAAAATAGCTATCGGAGCAGCTCGAGGCCTTGCTTTCTTGCACAGTTTAGAAAAACAAGTTATATACAGAGATTTTAAGACCTCAAATATATTGCTTGATGGGAATTACAACGCAAAACTCTCAGATTTTGGCTTGGCGAAATTGGGGCCAACTGGTGGAGACTCGCATGTCTCAACTAGGATTATGGGAACTTACGGCTACGCAGCTCCGGAATACATTGCAACAGGTCATTTGTATGTGAAGAGTGATGTGTACAGTTTCGGTGTTGTACTACTTGAACTTCTCACAGGGTTACGAGCACTCGATACTAAACGCCCCAAGGAACAACTTAATCTGGTAAGCTGGGCTAATCGACTTCTTTCAAATAAAAGATATTTGAAAACCATCATCGATGGGCAGATGGAAGGCCAATATTCCTTCAAGGCAGCATCAAAGGCAGGACAGATTACTCTAAAATGTCTAGCACCAGATCCTAAAAACCGACCTTCCATGAAAGAAGTTGTGGAGGAACTGGAACAGATTCAGGCAATCGAGGAAAAACTTACGGCTACAGATTCAAGCAACTCCCATTTAGGTATGGTGTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

828

Amino Acids

92.49

Weight (kDa)

8.32

Isoelectric Point (pI)

41.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 131 - 441 4e-33 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 134 - 443 2.1e-36 Protein tyrosine and serine/threonine kinase
PK_Tyr_Ser-Thr PF07714 525 - 804 1.9e-45 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 525 - 802 4.3e-43 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 301, 2066
AccB7I CCANNNNNTGG 1 cut(s) 2054
AccIII TCCGGA 1 cut(s) 2107
AciI CCGC 3 cut(s) 1213, 1422, 1877
AclWI GGATC 4 cut(s) 968, 1280, 1293, 2363
AcoI YGGCCR 1 cut(s) 1495
AcsI RAATTY 6 cut(s) 39, 382, 892, 1189, 1335, 1561
AcuI CTGAAG 2 cut(s) 129, 1028
AfaI GTAC 3 cut(s) 66, 2153, 2169
AfiI CCNNNNNNNGG 6 cut(s) 54, 750, 1092, 1140, 1282, 2054
AflII CTTAAG 2 cut(s) 340, 842
AflIII ACRYGT 2 cut(s) 10, 108
AjiI CACGTC 2 cut(s) 11, 1210
AjnI CCWGG 1 cut(s) 685
Alw21I GWGCWC 1 cut(s) 2200
Alw26I GTCTC 5 cut(s) 287, 323, 1502, 2052, 2074
AlwI GGATC 4 cut(s) 968, 1280, 1293, 2363
AlwNI CAGNNNCTG 1 cut(s) 1051
Ama87I CYCGRG 1 cut(s) 1920
Aor13HI TCCGGA 1 cut(s) 2107
AoxI GGCC 7 cut(s) 413, 846, 1222, 1495, 1924, 2045, 2305
ApaI GGGCCC 1 cut(s) 417
ApeKI GCWGC 7 cut(s) 255, 287, 725, 1241, 1916, 2102, 2324
ApoI RAATTY 6 cut(s) 39, 382, 892, 1189, 1335, 1561
Asp700I GAANNNNTTC 5 cut(s) 568, 1335, 1698, 1747, 2418
AspS9I GGNCC 4 cut(s) 413, 414, 1222, 2045
AsuC2I CCSGG 1 cut(s) 217
AsuHPI GGTGA 7 cut(s) 196, 566, 807, 935, 1598, 1632, 1741
AsuII TTCGAA 1 cut(s) 1406
AvaI CYCGRG 1 cut(s) 1920
BaeGI GKGCMC 1 cut(s) 417
BalI TGGCCA 1 cut(s) 1497
BamHI GGATCC 1 cut(s) 1285
BanII GRGCYC 2 cut(s) 417, 686
BbsI GAAGAC 2 cut(s) 458, 1553
Bbv12I GWGCWC 1 cut(s) 2200
BbvI GCAGC 7 cut(s) 267, 299, 737, 1253, 1928, 2114, 2336
BccI CCATC 8 cut(s) 121, 389, 1208, 1487, 1991, 2285, 2291, 2293
BceAI ACGGC 4 cut(s) 1109, 1157, 2110, 2460
BciT130I CCWGG 1 cut(s) 687
BciVI GTATCC 1 cut(s) 1772
BclI TGATCA 1 cut(s) 1480
BcnI CCSGG 1 cut(s) 217
BcoDI GTCTC 5 cut(s) 287, 323, 1502, 2052, 2074
BfaI CTAG 6 cut(s) 524, 794, 1277, 1413, 2076, 2360
BfmI CTRYAG 2 cut(s) 712, 2448
BfrI CTTAAG 2 cut(s) 340, 842
BfuI GTATCC 1 cut(s) 1772
BisI GCNGC 7 cut(s) 256, 288, 726, 1242, 1917, 2103, 2325
BlsI GCNGC 7 cut(s) 257, 289, 727, 1243, 1918, 2104, 2326
Bme1390I CCNGG 2 cut(s) 217, 687
BmeT110I CYCGRG 1 cut(s) 1920
BmgBI CACGTC 2 cut(s) 11, 1210
BmgT120I GGNCC 4 cut(s) 413, 414, 1222, 2045
BmiI GGNNCC 6 cut(s) 414, 415, 683, 741, 1287, 2046
BmrFI CCNGG 2 cut(s) 217, 687
BmrI ACTGGG 1 cut(s) 387
BmsI GCATC 3 cut(s) 612, 712, 2336
BmuI ACTGGG 1 cut(s) 387
BoxI GACNNNNGTC 1 cut(s) 335
BpiI GAAGAC 2 cut(s) 458, 1553
BpmI CTGGAG 1 cut(s) 798
Bpu14I TTCGAA 1 cut(s) 1406
BpuEI CTTGAG 2 cut(s) 771, 1540
BpuMI CCSGG 1 cut(s) 217
Bsa29I ATCGAT 1 cut(s) 2289
BsaBI GATNNNNATC 3 cut(s) 1077, 1479, 1673
BsaJI CCNNGG 4 cut(s) 685, 704, 1236, 2217
BsaWI WCCGGW 1 cut(s) 2107
Bsc4I CCNNNNNNNGG 6 cut(s) 54, 750, 1092, 1140, 1282, 2054
Bse1I ACTGG 8 cut(s) 382, 768, 925, 1332, 1368, 1663, 2056, 2415
Bse3DI GCAATG 2 cut(s) 126, 2115
Bse8I GATNNNNATC 3 cut(s) 1077, 1479, 1673
BseAI TCCGGA 1 cut(s) 2107
BseBI CCWGG 1 cut(s) 687
BseCI ATCGAT 1 cut(s) 2289
BseDI CCNNGG 4 cut(s) 685, 704, 1236, 2217
BseGI GGATG 5 cut(s) 136, 451, 1511, 1630, 1753
BseJI GATNNNNATC 3 cut(s) 1077, 1479, 1673
BseLI CCNNNNNNNGG 6 cut(s) 54, 750, 1092, 1140, 1282, 2054
BseMI GCAATG 2 cut(s) 126, 2115
BseMII CTCAG 1 cut(s) 2034
BseNI ACTGG 8 cut(s) 382, 768, 925, 1332, 1368, 1663, 2056, 2415
BseSI GKGCMC 1 cut(s) 417
BseXI GCAGC 7 cut(s) 267, 299, 737, 1253, 1928, 2114, 2336
BseYI CCCAGC 4 cut(s) 1085, 1133, 1376, 2241
BsgI GTGCAG 1 cut(s) 282
BshFI GGCC 7 cut(s) 415, 848, 1224, 1497, 1926, 2047, 2307
BshVI ATCGAT 1 cut(s) 2289
BsiHKAI GWGCWC 1 cut(s) 2200
BsiHKCI CYCGRG 1 cut(s) 1920
BsiSI CCGG 3 cut(s) 216, 1390, 2108
BslFI GGGAC 2 cut(s) 1068, 1116
BslI CCNNNNNNNGG 6 cut(s) 54, 750, 1092, 1140, 1282, 2054
BsmAI GTCTC 5 cut(s) 287, 323, 1502, 2052, 2074
BsmFI GGGAC 2 cut(s) 1068, 1116
BsmI GAATGC 1 cut(s) 489
BsnI GGCC 7 cut(s) 415, 848, 1224, 1497, 1926, 2047, 2307
BsoBI CYCGRG 1 cut(s) 1920
Bsp119I TTCGAA 1 cut(s) 1406
Bsp120I GGGCCC 1 cut(s) 413
Bsp1286I GDGCHC 3 cut(s) 417, 686, 2200
Bsp13I TCCGGA 1 cut(s) 2107
Bsp1407I TGTACA 1 cut(s) 2151
Bsp143I GATC 5 cut(s) 664, 973, 1285, 1480, 2368
BspACI CCGC 3 cut(s) 1213, 1422, 1877
BspANI GGCC 7 cut(s) 415, 848, 1224, 1497, 1926, 2047, 2307
BspCNI CTCAG 1 cut(s) 2033
BspDI ATCGAT 1 cut(s) 2289
BspEI TCCGGA 1 cut(s) 2107
BspHI TCATGA 2 cut(s) 1821, 2483
BspLI GGNNCC 6 cut(s) 414, 415, 683, 741, 1287, 2046
BspPI GGATC 4 cut(s) 968, 1280, 1293, 2363
BspT104I TTCGAA 1 cut(s) 1406
BspTI CTTAAG 2 cut(s) 340, 842
BsrDI GCAATG 2 cut(s) 126, 2115
BsrGI TGTACA 1 cut(s) 2151
BsrI ACTGG 8 cut(s) 382, 768, 925, 1332, 1368, 1663, 2056, 2415
BssECI CCNNGG 4 cut(s) 685, 704, 1236, 2217
BssMI GATC 5 cut(s) 664, 973, 1285, 1480, 2368
BssT1I CCWWGG 3 cut(s) 704, 1236, 2217
Bst2UI CCWGG 1 cut(s) 687
Bst4CI ACNGT 6 cut(s) 605, 836, 930, 1784, 1943, 2156
Bst6I CTCTTC 3 cut(s) 354, 528, 2135
BstAFI CTTAAG 2 cut(s) 340, 842
BstAPI GCANNNNNTGC 1 cut(s) 1386
BstAUI TGTACA 1 cut(s) 2151
BstBI TTCGAA 1 cut(s) 1406
BstC8I GCNNGC 4 cut(s) 253, 459, 1654, 1722
BstDEI CTNAG 2 cut(s) 468, 2020
BstF5I GGATG 5 cut(s) 136, 451, 1511, 1630, 1753
BstKTI GATC 5 cut(s) 667, 976, 1288, 1483, 2371
BstMAI GTCTC 5 cut(s) 287, 323, 1502, 2052, 2074
BstMBI GATC 5 cut(s) 664, 973, 1285, 1480, 2368
BstMWI GCNNNNNNNGC 5 cut(s) 79, 1386, 1833, 1913, 2333
BstNI CCWGG 1 cut(s) 687
BstNSI RCATGY 1 cut(s) 2069
BstPAI GACNNNNGTC 1 cut(s) 335
BstSCI CCNGG 2 cut(s) 215, 685
BstSFI CTRYAG 2 cut(s) 712, 2448
BstSLI GKGCMC 1 cut(s) 417
BstV1I GCAGC 7 cut(s) 267, 299, 737, 1253, 1928, 2114, 2336
BstV2I GAAGAC 2 cut(s) 458, 1553
BstX2I RGATCY 2 cut(s) 1285, 2368
BstYI RGATCY 2 cut(s) 1285, 2368
Bsu15I ATCGAT 1 cut(s) 2289
BsuI GTATCC 1 cut(s) 1772
BsuRI GGCC 7 cut(s) 415, 848, 1224, 1497, 1926, 2047, 2307
BsuTUI ATCGAT 1 cut(s) 2289
BtgZI GCGATG 1 cut(s) 1029
BtrI CACGTC 2 cut(s) 11, 1210
BtsCI GGATG 5 cut(s) 136, 451, 1511, 1630, 1753
BtsI GCAGTG 3 cut(s) 265, 1387, 1423
BtsIMutI CAGTG 7 cut(s) 265, 841, 1068, 1116, 1387, 1423, 1656
Cac8I GCNNGC 4 cut(s) 253, 459, 1654, 1722
CaiI CAGNNNCTG 1 cut(s) 1051
CciI TCATGA 2 cut(s) 1821, 2483
Cfr13I GGNCC 4 cut(s) 413, 414, 1222, 2045
ClaI ATCGAT 1 cut(s) 2289
CseI GACGC 1 cut(s) 463
Csp6I GTAC 3 cut(s) 65, 2152, 2168
CspCI CAANNNNNGTGG 2 cut(s) 1158, 1193
CviAII CATG 7 cut(s) 643, 736, 1204, 1822, 2066, 2389, 2484
CviQI GTAC 3 cut(s) 65, 2152, 2168
DdeI CTNAG 2 cut(s) 468, 2020
DpnI GATC 5 cut(s) 666, 975, 1287, 1482, 2370
DpnII GATC 5 cut(s) 664, 973, 1285, 1480, 2368
DraI TTTAAA 2 cut(s) 1362, 1711
DrdI GACNNNNNNGTC 2 cut(s) 301, 2066
DseDI GACNNNNNNGTC 2 cut(s) 301, 2066
EaeI YGGCCR 1 cut(s) 1495
Eam1104I CTCTTC 3 cut(s) 354, 528, 2135
EarI CTCTTC 3 cut(s) 354, 528, 2135
EciI GGCGGA 1 cut(s) 1437
Eco130I CCWWGG 3 cut(s) 704, 1236, 2217
Eco147I AGGCCT 2 cut(s) 848, 1926
Eco24I GRGCYC 2 cut(s) 417, 686
Eco32I GATATC 1 cut(s) 213
Eco57I CTGAAG 2 cut(s) 129, 1028
Eco88I CYCGRG 1 cut(s) 1920
EcoO109I RGGNCCY 2 cut(s) 413, 414
EcoRII CCWGG 1 cut(s) 685
EcoRV GATATC 1 cut(s) 213
EcoT14I CCWWGG 3 cut(s) 704, 1236, 2217
EcoT38I GRGCYC 2 cut(s) 417, 686
ErhI CCWWGG 3 cut(s) 704, 1236, 2217
FaeI CATG 7 cut(s) 646, 739, 1207, 1825, 2069, 2392, 2487
FalI AAGNNNNNCTT 4 cut(s) 461, 493, 1285, 1317
FaqI GGGAC 2 cut(s) 1068, 1116
FatI CATG 7 cut(s) 642, 735, 1203, 1821, 2065, 2388, 2483
FbaI TGATCA 1 cut(s) 1480
Fnu4HI GCNGC 7 cut(s) 256, 288, 726, 1242, 1917, 2103, 2325
FokI GGATG 5 cut(s) 143, 458, 1498, 1637, 1740
FriOI GRGCYC 2 cut(s) 417, 686
Fsp4HI GCNGC 7 cut(s) 256, 288, 726, 1242, 1917, 2103, 2325
FspBI CTAG 6 cut(s) 524, 794, 1277, 1413, 2076, 2360
GluI GCNGC 7 cut(s) 256, 288, 726, 1242, 1917, 2103, 2325
GsaI CCCAGC 4 cut(s) 1089, 1137, 1380, 2245
GsuI CTGGAG 1 cut(s) 798
HaeIII GGCC 7 cut(s) 415, 848, 1224, 1497, 1926, 2047, 2307
HapII CCGG 3 cut(s) 216, 1390, 2108
HgaI GACGC 1 cut(s) 463
Hin1II CATG 7 cut(s) 646, 739, 1207, 1825, 2069, 2392, 2487
HindIII AAGCTT 2 cut(s) 655, 1834
HpaII CCGG 3 cut(s) 216, 1390, 2108
HphI GGTGA 7 cut(s) 196, 566, 807, 935, 1598, 1632, 1741
Hpy166II GTNNAC 5 cut(s) 832, 926, 1166, 1732, 2152
Hpy188I TCNGA 8 cut(s) 148, 394, 547, 1444, 1507, 1856, 1913, 2023
Hpy8I GTNNAC 5 cut(s) 832, 926, 1166, 1732, 2152
Hpy99I CGWCG 1 cut(s) 1636
HpyCH4III ACNGT 6 cut(s) 605, 836, 930, 1784, 1943, 2156
HpyCH4IV ACGT 5 cut(s) 10, 108, 346, 1209, 1631
HpyCH4V TGCA 8 cut(s) 263, 461, 725, 805, 881, 1538, 1939, 2120
HpyF10VI GCNNNNNNNGC 5 cut(s) 79, 1386, 1833, 1913, 2333
HpyF3I CTNAG 2 cut(s) 468, 2020
HpySE526I ACGT 5 cut(s) 10, 108, 346, 1209, 1631
Hsp92II CATG 7 cut(s) 646, 739, 1207, 1825, 2069, 2392, 2487
Kpn2I TCCGGA 1 cut(s) 2107
Ksp22I TGATCA 1 cut(s) 1480
Kzo9I GATC 5 cut(s) 664, 973, 1285, 1480, 2368
LmnI GCTCC 4 cut(s) 116, 681, 1913, 2110
Lsp1109I GCAGC 7 cut(s) 267, 299, 737, 1253, 1928, 2114, 2336
LweI GCATC 3 cut(s) 612, 712, 2336
MaeI CTAG 6 cut(s) 524, 794, 1277, 1413, 2076, 2360
MaeII ACGT 5 cut(s) 10, 108, 346, 1209, 1631
MaeIII GTNAC 7 cut(s) 422, 599, 836, 930, 1033, 1800, 2190
MalI GATC 5 cut(s) 666, 975, 1287, 1482, 2370
MboI GATC 5 cut(s) 664, 973, 1285, 1480, 2368
MfeI CAATTG 2 cut(s) 275, 1488
MflI RGATCY 2 cut(s) 1285, 2368
MhlI GDGCHC 3 cut(s) 417, 686, 2200
MlsI TGGCCA 1 cut(s) 1497
MluNI TGGCCA 1 cut(s) 1497
MlyI GAGTC 3 cut(s) 311, 711, 2054
MmeI TCCRAC 2 cut(s) 1539, 1602
Mox20I TGGCCA 1 cut(s) 1497
MroI TCCGGA 1 cut(s) 2107
MroXI GAANNNNTTC 5 cut(s) 568, 1335, 1698, 1747, 2418
MscI TGGCCA 1 cut(s) 1497
MseI TTAA 9 cut(s) 204, 341, 843, 1061, 1109, 1361, 1710, 1974, 2229
MslI CAYNNNNRTG 5 cut(s) 1002, 1208, 1370, 1661, 2133
Msp20I TGGCCA 1 cut(s) 1497
MspCI CTTAAG 2 cut(s) 340, 842
MspI CCGG 3 cut(s) 216, 1390, 2108
MspR9I CCNGG 2 cut(s) 217, 687
MunI CAATTG 2 cut(s) 275, 1488
Mva1269I GAATGC 1 cut(s) 489
MvaI CCWGG 1 cut(s) 687
MwoI GCNNNNNNNGC 5 cut(s) 79, 1386, 1833, 1913, 2333
NciI CCSGG 1 cut(s) 217
NdeII GATC 5 cut(s) 664, 973, 1285, 1480, 2368
NlaIII CATG 7 cut(s) 646, 739, 1207, 1825, 2069, 2392, 2487
NlaIV GGNNCC 6 cut(s) 414, 415, 683, 741, 1287, 2046
NmuCI GTSAC 2 cut(s) 836, 930
NspI RCATGY 1 cut(s) 2069
NspV TTCGAA 1 cut(s) 1406
PaeR7I CTCGAG 1 cut(s) 1920
PagI TCATGA 2 cut(s) 1821, 2483
PceI AGGCCT 2 cut(s) 848, 1926
PctI GAATGC 1 cut(s) 489
PdmI GAANNNNTTC 5 cut(s) 568, 1335, 1698, 1747, 2418
PfeI GAWTC 8 cut(s) 220, 508, 1403, 1843, 1861, 1896, 2419, 2453
PflMI CCANNNNNTGG 1 cut(s) 2054
PfoI TCCNGGA 1 cut(s) 215
PkrI GCNGC 7 cut(s) 257, 289, 727, 1243, 1918, 2104, 2326
PleI GAGTC 3 cut(s) 310, 711, 2054
PpsI GAGTC 3 cut(s) 310, 711, 2054
PshAI GACNNNNGTC 1 cut(s) 335
Psp6I CCWGG 1 cut(s) 685
PspFI CCCAGC 4 cut(s) 1085, 1133, 1376, 2241
PspGI CCWGG 1 cut(s) 685
PspN4I GGNNCC 6 cut(s) 414, 415, 683, 741, 1287, 2046
PspOMI GGGCCC 1 cut(s) 413
PspPI GGNCC 4 cut(s) 413, 414, 1222, 2045
PspXI VCTCGAGB 1 cut(s) 1920
PstNI CAGNNNCTG 1 cut(s) 1051
PsuI RGATCY 2 cut(s) 1285, 2368
RsaI GTAC 3 cut(s) 66, 2153, 2169
RsaNI GTAC 3 cut(s) 65, 2152, 2168
RseI CAYNNNNRTG 5 cut(s) 1002, 1208, 1370, 1661, 2133
SaqAI TTAA 9 cut(s) 204, 341, 843, 1061, 1109, 1361, 1710, 1974, 2229
SatI GCNGC 7 cut(s) 256, 288, 726, 1242, 1917, 2103, 2325
Sau3AI GATC 5 cut(s) 664, 973, 1285, 1480, 2368
Sau96I GGNCC 4 cut(s) 413, 414, 1222, 2045
SchI GAGTC 3 cut(s) 311, 711, 2054
ScrFI CCNGG 2 cut(s) 217, 687
SduI GDGCHC 3 cut(s) 417, 686, 2200
SfaNI GCATC 3 cut(s) 612, 712, 2336
SfcI CTRYAG 2 cut(s) 712, 2448
Sfr274I CTCGAG 1 cut(s) 1920
SfuI TTCGAA 1 cut(s) 1406
SlaI CTCGAG 1 cut(s) 1920
SmiMI CAYNNNNRTG 5 cut(s) 1002, 1208, 1370, 1661, 2133
SmlI CTYRAG 5 cut(s) 340, 786, 842, 1519, 1920
SmoI CTYRAG 5 cut(s) 340, 786, 842, 1519, 1920
SseBI AGGCCT 2 cut(s) 848, 1926
SsiI CCGC 3 cut(s) 1213, 1422, 1877
SspI AATATT 2 cut(s) 1229, 2312
SspMI CTAG 6 cut(s) 524, 794, 1277, 1413, 2076, 2360
StuI AGGCCT 2 cut(s) 848, 1926
StyD4I CCNGG 2 cut(s) 215, 685
StyI CCWWGG 3 cut(s) 704, 1236, 2217
TaaI ACNGT 6 cut(s) 605, 836, 930, 1784, 1943, 2156
TaiI ACGT 5 cut(s) 13, 111, 349, 1212, 1634
TaqI TCGA 9 cut(s) 15, 559, 720, 1406, 1921, 2202, 2251, 2289, 2430
TatI WGTACW 2 cut(s) 2151, 2167
TfiI GAWTC 8 cut(s) 220, 508, 1403, 1843, 1861, 1896, 2419, 2453
Tru1I TTAA 9 cut(s) 204, 341, 843, 1061, 1109, 1361, 1710, 1974, 2229
Tru9I TTAA 9 cut(s) 204, 341, 843, 1061, 1109, 1361, 1710, 1974, 2229
TscAI CASTG 7 cut(s) 265, 841, 1075, 1123, 1387, 1423, 1663
TseFI GTSAC 2 cut(s) 836, 930
TseI GCWGC 7 cut(s) 255, 287, 725, 1241, 1916, 2102, 2324
Tsp45I GTSAC 2 cut(s) 836, 930
TspDTI ATGAA 6 cut(s) 137, 631, 662, 1641, 1810, 2405
TspGWI ACGGA 1 cut(s) 1873
TspRI CASTG 7 cut(s) 265, 841, 1075, 1123, 1387, 1423, 1663
Van91I CCANNNNNTGG 1 cut(s) 2054
Vha464I CTTAAG 2 cut(s) 340, 842
XapI RAATTY 6 cut(s) 39, 382, 892, 1189, 1335, 1561
XceI RCATGY 1 cut(s) 2069
XhoI CTCGAG 1 cut(s) 1920
XmnI GAANNNNTTC 5 cut(s) 568, 1335, 1698, 1747, 2418
XspI CTAG 6 cut(s) 524, 794, 1277, 1413, 2076, 2360
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.