Rw0G013190

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00591
Physical Location & Seq
Reverse (-)
24879 .. 29790
4912 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G013190.1

Sequence Viewer

Length: 2823 bp
ATGAAGGAAGTCCTCAACATTAGGGGGAGGGAAGTGTTCACACTGCTCACAGATGTGAACATTCTTTGGCAGGGCAGCTTTGTTCTATCAGTTGTGCCTGATCGACAATATAGAGGTTGTTGTATAGAATCAAGAATGGAGAACCTTGTTGCAGGGGGTGCTATGGGTGTACCATTTAATGCGCTCTATGATGTCATTAAGAAAGTGGTGGTCAAGACTAAGATGTTTAAGCCTCTCCTCAAAGATCTTGACTCAATGGTAGACTCTTTGAAACCACTGATCGATGAGATGGAAAAGTGCAATAAGGTGTTGGATCATCCGGAGAATGAACTTAAAGGATTTAAAGTACAAATGCAGAACGAAGGATTTAAAGTACAAATGCAGAACGGTGCAGTGCTCATTCCCAAGTGCTCCAAGGTTAGGTGGTGGAATATTTGCAAAAAGTATAAATACACCAACCAACTTCTTGGATTAAACAGCTCTCTTCGGAGTTTATTTGATATACTGAACGTGCAAGCAGCAAGAGATGGGAAGAAGACGCTGGTTGAAGTAGGACATATAGGGACGGTTGTCCAACATACTCATACAGCAATACTGGAAGTTGCAGAGAATGTGCAACAGAACTTGGTTGCGACAAATGATATAGAGACGGTGGTCCATCGGACTGATGTAACAAGCTTGCAAGTAGCAAGGGATGTGAGAAATATAGATACTCTGGTCCAGCGTACTGATGAAACAAGCTTGCAAGTAGCAAGGGGTGTGAGAAACATAGAGACAGTGGTACAGCGGATTGATGACAATGTTGTGTTACTGGTACACAATCAGAAAATAGACCAGGTTCGAGGTTGGGGTGCAGTACCTGTAGGTGCACCATTTACAGTTGGAGTGGATATGCCTTTGAGGGAATTGAAGATTAAGCTTCTTAAGGATGAGAAAGTAACAATGCTTGTGCTCACTGCTCCAGGAGGATGTGGGAAGACCACTTTAGCAATAAAGTTTTGTGGAGATTACGAAGTCAAAGACAAATTTAAGGACAATATCTTCTTTGTCACTGTCTCAAAGAAGTCCGATGACCTTGTTGTACAAGAGCTTTATCACTGCTGGGGTTCTAAAATTCCTACTTTGCACTGTGAAGTTGATGTGGTTAAGTGGCTACAGCAATTCCGGATTGGAGTAGGAAAGAATCCTGTACTTTTTGTCTTGGATGATGTTTGGTCTGGATCGGAATCCCTTCTTCAGAAGTTTTATGATTTCAAATTGCCAAATTCCAAGATTTTGGTGACATCAAGATTTAGATTTCCAAGATTTGGTACTCAACATAGTCTAGAACCGTTGAATATTGAAGATGCAGCAACTCTTTTCAAACATTCAGCATCCCTGGGAGATCGAAGCTGTAATATTCCTGAAGATATTATGAGAAAGATAATAGAGCATTTCAAAGAATCTCCACTTGCCATTACAGTGGTTGGAAGATCTCTTTGTGGAAAACCTGTAGAGTGCTGGCTGAAAAGAGTCTCTACACTAAAAGGTGCTTCTATTCGTAATTCTGAGGATAAATTGCTAGATGGCCTTCAGAGTTGTTTAGATGCCTTGAATGAAGAAGATCATATCTTGAAGGAATGCTTCTTAGACCTGGGTTCATTTCCTGAAGACCAAAGGATCTCTGCTGCTGCTCTCATTGATATGTGGGCAGAACTATATAAGCTAGAAGATTTTGAATCCATTGCGAACCTCCACGAGCTTGCTGCTCGAAGTCTGGCTAATCTTCTAATTACACGGAAGGAGACGATGGAGGCAGATGGGTACTACAGTGAACACTTCATTACTCAGCATGATTTGCTTAGACAGTTTGCTATCTACCAGCCAAAGCCAGAAGCAAATAATAAAAGACGGATCATAGACAAATGGGGAGACAATCTACCTGAGTGCTTGACAGGACAGAAGCATCAACCCATCAAGGCCCGCCTACTATCTATCTCCTCCGAGGGAGTGTTCTCGATGAATTTGGACAACATTGAACTGGCAGAGGTTGAAGTTCTAGTTTTGAATTTTGACACACAGAACTATGCTTTACCCGAATTTGTGGTCAAGATGGACAAACTGAAGGTTTTAATAGTCAGAAATCATGGTTTTTTACCTGCTGAATTGTGCAACATTCAACTGCTGGGTTCTTTATCAAATCTGAAGAGAATCAGATTAGAGCGCATTTCAATTTCTTCCATAACCAAGAATCTCATACAGTTGAAGAGTGTAAAGAAGATATCTCTATTCATGTGCAACATTGGACAAGCTTTCAGCAATTGTTCCCTTCAAATATCAGATGCATTGCCATATTTAGAGGAAATGAACATTGACTATTGCAATGATTTGGTGGAGTTGCCTGCCGCACTGTGTGCTCTGGTTAACCTAAAGAAGCTCAGTATAACCAACTCGCATAAGCTATCTGCCTTGCCTGAAGAGATTGGAAAGCTGGTCAATTTAGAAGTATTGAGGCTGAGGTCTTGTACAGACTTGGCAAAGTTGCCAGACTCGACTAGGAACCTAGAGAAGTTAAACTTTCTAGACATAGCTGATTGCTTCAGCATTCGGGAATTGCCTGAAGACTCTGGTGGAATGAGCAGTTTAAAAAAGATCAACATGAGAATGTGTTCAAGATTGCAAGAGCTGCCTTCATCAGTTGTGGATCTTGAGCAGTTGCAGGAAGTGGTATGTGATGAAGACACAGGTGATTTATGGGAACCCTTCTTACCCCATCTCAAAAACCTCCATATAAAGCCGGTCAAAGAAAATGTCAACCTGAATTGGCTACATAAGCTTCAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

940

Amino Acids

106.42

Weight (kDa)

6.44

Isoelectric Point (pI)

43.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RPW8 PF05659 48 - 189 5.8e-28 Arabidopsis broad-spectrum mildew resistance protein RPW8
NB-ARC PF00931 299 - 455 2.9e-10 NB-ARC domain
LRR_14 PF23598 796 - 878 1e-10 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2146
AccB7I CCANNNNNTGG 1 cut(s) 1307
AccI GTMKAC 1 cut(s) 261
AccIII TCCGGA 2 cut(s) 319, 1164
AciI CCGC 3 cut(s) 787, 1963, 2385
AclWI GGATC 5 cut(s) 321, 1228, 1667, 1901, 2691
AcsI RAATTY 6 cut(s) 1025, 1113, 1264, 2002, 2047, 2078
AcuI CTGAAG 9 cut(s) 1220, 1425, 1556, 1668, 2123, 2204, 2475, 2563, 2619
AdeI CACNNNGTG 1 cut(s) 2393
AfiI CCNNNNNNNGG 2 cut(s) 420, 1307
AflII CTTAAG 1 cut(s) 923
AjnI CCWGG 4 cut(s) 834, 961, 1377, 1632
AleI CACNNNNGTG 1 cut(s) 53
Alw21I GWGCWC 5 cut(s) 399, 413, 871, 954, 2398
Alw26I GTCTC 6 cut(s) 641, 767, 1060, 1519, 1778, 1905
Alw44I GTGCAC 1 cut(s) 867
AlwI GGATC 5 cut(s) 321, 1228, 1667, 1901, 2691
AlwNI CAGNNNCTG 1 cut(s) 860
Aor13HI TCCGGA 2 cut(s) 319, 1164
AoxI GGCC 2 cut(s) 1567, 1959
ApaLI GTGCAC 1 cut(s) 867
ApeKI GCWGC 7 cut(s) 75, 518, 1349, 1667, 1670, 1745, 2665
ApoI RAATTY 6 cut(s) 1025, 1113, 1264, 2002, 2047, 2078
ArsI GACNNNNNNTTYG 4 cut(s) 2070, 2102, 2775, 2807
Asp700I GAANNNNTTC 2 cut(s) 1230, 2647
AspLEI GCGC 2 cut(s) 184, 2205
AspS9I GGNCC 3 cut(s) 655, 718, 1960
AsuHPI GGTGA 2 cut(s) 1291, 2738
AvaII GGWCC 2 cut(s) 655, 718
BaeGI GKGCMC 1 cut(s) 871
BaeI ACNNNNGTAYC 4 cut(s) 702, 735, 1795, 1828
BauI CACGAG 1 cut(s) 1736
BbsI GAAGAC 5 cut(s) 542, 983, 1656, 2607, 2724
Bbv12I GWGCWC 5 cut(s) 399, 413, 871, 954, 2398
BbvCI CCTCAGC 1 cut(s) 2495
BbvI GCAGC 7 cut(s) 87, 530, 1361, 1654, 1657, 1732, 2652
BccI CCATC 9 cut(s) 283, 521, 666, 1559, 1783, 1793, 1961, 2086, 2760
BcgI CGANNNNNNTGC 2 cut(s) 1727, 1761
BciT130I CCWGG 4 cut(s) 836, 963, 1379, 1634
BcoDI GTCTC 6 cut(s) 641, 767, 1060, 1519, 1778, 1905
BfaI CTAG 7 cut(s) 1325, 1562, 1706, 2039, 2535, 2543, 2561
BfmI CTRYAG 4 cut(s) 861, 1154, 1491, 1807
BfrI CTTAAG 1 cut(s) 923
BfuAI ACCTGC 1 cut(s) 2146
BglII AGATCT 2 cut(s) 244, 1472
BisI GCNGC 8 cut(s) 76, 519, 1350, 1668, 1671, 1746, 2385, 2666
BlsI GCNGC 8 cut(s) 77, 520, 1351, 1669, 1672, 1747, 2386, 2667
Bme1390I CCNGG 4 cut(s) 836, 963, 1379, 1634
Bme18I GGWCC 2 cut(s) 655, 718
BmgT120I GGNCC 3 cut(s) 655, 718, 1960
BmiI GGNNCC 2 cut(s) 2540, 2739
BmrFI CCNGG 4 cut(s) 836, 963, 1379, 1634
BmsI GCATC 5 cut(s) 1336, 1382, 1576, 1954, 2311
BoxI GACNNNNGTC 2 cut(s) 569, 653
BpiI GAAGAC 5 cut(s) 542, 983, 1656, 2607, 2724
BpmI CTGGAG 1 cut(s) 945
Bpu10I CCTNAGC 1 cut(s) 2495
BpuEI CTTGAG 1 cut(s) 2708
Bsa29I ATCGAT 1 cut(s) 282
BsaBI GATNNNNATC 1 cut(s) 1225
BsaJI CCNNGG 5 cut(s) 414, 1377, 1378, 1633, 1983
BsaWI WCCGGW 2 cut(s) 319, 1164
Bsc4I CCNNNNNNNGG 2 cut(s) 420, 1307
Bse118I RCCGGY 1 cut(s) 2776
Bse1I ACTGG 3 cut(s) 600, 816, 2025
Bse3DI GCAATG 3 cut(s) 1722, 2324, 2368
Bse8I GATNNNNATC 1 cut(s) 1225
BseAI TCCGGA 2 cut(s) 319, 1164
BseBI CCWGG 4 cut(s) 836, 963, 1379, 1634
BseCI ATCGAT 1 cut(s) 282
BseDI CCNNGG 5 cut(s) 414, 1377, 1378, 1633, 1983
BseGI GGATG 6 cut(s) 316, 700, 934, 974, 1210, 1373
BseJI GATNNNNATC 1 cut(s) 1225
BseLI CCNNNNNNNGG 2 cut(s) 420, 1307
BseMI GCAATG 3 cut(s) 1722, 2324, 2368
BseMII CTCAG 5 cut(s) 1539, 1841, 1914, 2431, 2486
BseNI ACTGG 3 cut(s) 600, 816, 2025
BseRI GAGGAG 2 cut(s) 227, 1969
BseSI GKGCMC 1 cut(s) 871
BseXI GCAGC 7 cut(s) 87, 530, 1361, 1654, 1657, 1732, 2652
BseYI CCCAGC 2 cut(s) 1101, 2164
BsgI GTGCAG 2 cut(s) 411, 873
BshFI GGCC 2 cut(s) 1569, 1961
BshVI ATCGAT 1 cut(s) 282
BsiHKAI GWGCWC 5 cut(s) 399, 413, 871, 954, 2398
BsiSI CCGG 3 cut(s) 320, 1165, 2777
BslFI GGGAC 1 cut(s) 577
BslI CCNNNNNNNGG 2 cut(s) 420, 1307
BsmAI GTCTC 6 cut(s) 641, 767, 1060, 1519, 1778, 1905
BsmBI CGTCTC 2 cut(s) 641, 1778
BsmFI GGGAC 1 cut(s) 577
BsmI GAATGC 2 cut(s) 1625, 2583
BsnI GGCC 2 cut(s) 1569, 1961
Bsp1286I GDGCHC 5 cut(s) 399, 413, 871, 954, 2398
Bsp13I TCCGGA 2 cut(s) 319, 1164
Bsp1407I TGTACA 2 cut(s) 1081, 2504
BspACI CCGC 3 cut(s) 787, 1963, 2385
BspANI GGCC 2 cut(s) 1569, 1961
BspCNI CTCAG 5 cut(s) 1540, 1840, 1915, 2430, 2487
BspDI ATCGAT 1 cut(s) 282
BspEI TCCGGA 2 cut(s) 319, 1164
BspLI GGNNCC 2 cut(s) 2540, 2739
BspMI ACCTGC 1 cut(s) 2146
BspPI GGATC 5 cut(s) 321, 1228, 1667, 1901, 2691
BspTI CTTAAG 1 cut(s) 923
BsrDI GCAATG 3 cut(s) 1722, 2324, 2368
BsrFI RCCGGY 1 cut(s) 2776
BsrGI TGTACA 2 cut(s) 1081, 2504
BsrI ACTGG 3 cut(s) 600, 816, 2025
BssAI RCCGGY 1 cut(s) 2776
BssECI CCNNGG 5 cut(s) 414, 1377, 1378, 1633, 1983
BssSI CACGAG 1 cut(s) 1736
BssT1I CCWWGG 1 cut(s) 414
Bst2BI CACGAG 1 cut(s) 1736
Bst2UI CCWGG 4 cut(s) 836, 963, 1379, 1634
Bst6I CTCTTC 4 cut(s) 489, 2180, 2240, 2451
BstAFI CTTAAG 1 cut(s) 923
BstAPI GCANNNNNTGC 4 cut(s) 158, 1837, 2393, 2665
BstAUI TGTACA 2 cut(s) 1081, 2504
BstC8I GCNNGC 7 cut(s) 516, 680, 743, 1502, 1743, 1963, 2382
BstDEI CTNAG 8 cut(s) 219, 1548, 1627, 1827, 1841, 1923, 2417, 2495
BstF5I GGATG 6 cut(s) 316, 700, 934, 974, 1210, 1373
BstHHI GCGC 2 cut(s) 184, 2205
BstMAI GTCTC 6 cut(s) 641, 767, 1060, 1519, 1778, 1905
BstMWI GCNNNNNNNGC 5 cut(s) 158, 1837, 2393, 2665, 2812
BstNI CCWGG 4 cut(s) 836, 963, 1379, 1634
BstPAI GACNNNNGTC 2 cut(s) 569, 653
BstSCI CCNGG 4 cut(s) 834, 961, 1377, 1632
BstSFI CTRYAG 4 cut(s) 861, 1154, 1491, 1807
BstSLI GKGCMC 1 cut(s) 871
BstV1I GCAGC 7 cut(s) 87, 530, 1361, 1654, 1657, 1732, 2652
BstV2I GAAGAC 5 cut(s) 542, 983, 1656, 2607, 2724
BstX2I RGATCY 4 cut(s) 244, 1472, 1659, 2683
BstXI CCANNNNNNTGG 3 cut(s) 467, 1276, 1462
BstYI RGATCY 4 cut(s) 244, 1472, 1659, 2683
Bsu15I ATCGAT 1 cut(s) 282
BsuRI GGCC 2 cut(s) 1569, 1961
BsuTUI ATCGAT 1 cut(s) 282
BtsCI GGATG 6 cut(s) 316, 700, 934, 974, 1210, 1373
BtsI GCAGTG 4 cut(s) 41, 399, 954, 1096
BveI ACCTGC 1 cut(s) 2146
Cac8I GCNNGC 7 cut(s) 516, 680, 743, 1502, 1743, 1963, 2382
CaiI CAGNNNCTG 1 cut(s) 860
CfoI GCGC 2 cut(s) 184, 2205
Cfr10I RCCGGY 1 cut(s) 2776
Cfr13I GGNCC 3 cut(s) 655, 718, 1960
ClaI ATCGAT 1 cut(s) 282
CseI GACGC 1 cut(s) 547
CsiI ACCWGGT 1 cut(s) 834
CviAII CATG 4 cut(s) 1832, 2126, 2272, 2638
DdeI CTNAG 8 cut(s) 219, 1548, 1627, 1827, 1841, 1923, 2417, 2495
DraI TTTAAA 3 cut(s) 343, 370, 2625
DraIII CACNNNGTG 1 cut(s) 2393
Eam1104I CTCTTC 4 cut(s) 489, 2180, 2240, 2451
EarI CTCTTC 4 cut(s) 489, 2180, 2240, 2451
Eco130I CCWWGG 1 cut(s) 414
Eco32I GATATC 1 cut(s) 2262
Eco47I GGWCC 2 cut(s) 655, 718
Eco57I CTGAAG 9 cut(s) 1220, 1425, 1556, 1668, 2123, 2204, 2475, 2563, 2619
EcoRII CCWGG 4 cut(s) 834, 961, 1377, 1632
EcoRV GATATC 1 cut(s) 2262
EcoT14I CCWWGG 1 cut(s) 414
EcoT22I ATGCAT 1 cut(s) 2326
ErhI CCWWGG 1 cut(s) 414
Esp3I CGTCTC 2 cut(s) 641, 1778
FaeI CATG 4 cut(s) 1835, 2129, 2275, 2641
FalI AAGNNNNNCTT 4 cut(s) 1607, 1639, 2540, 2572
FaqI GGGAC 1 cut(s) 577
FatI CATG 4 cut(s) 1831, 2125, 2271, 2637
FauI CCCGC 1 cut(s) 1970
FblI GTMKAC 1 cut(s) 261
Fnu4HI GCNGC 8 cut(s) 76, 519, 1350, 1668, 1671, 1746, 2385, 2666
FokI GGATG 6 cut(s) 303, 707, 941, 981, 1217, 1360
Fsp4HI GCNGC 8 cut(s) 76, 519, 1350, 1668, 1671, 1746, 2385, 2666
FspBI CTAG 7 cut(s) 1325, 1562, 1706, 2039, 2535, 2543, 2561
GlaI GCGC 2 cut(s) 183, 2204
GluI GCNGC 8 cut(s) 76, 519, 1350, 1668, 1671, 1746, 2385, 2666
GsaI CCCAGC 2 cut(s) 1105, 2168
GsuI CTGGAG 1 cut(s) 945
HaeIII GGCC 2 cut(s) 1569, 1961
HapII CCGG 3 cut(s) 320, 1165, 2777
HgaI GACGC 1 cut(s) 547
HhaI GCGC 2 cut(s) 184, 2205
Hin1II CATG 4 cut(s) 1835, 2129, 2275, 2641
Hin6I GCGC 2 cut(s) 182, 2203
HinP1I GCGC 2 cut(s) 182, 2203
HincII GTYRAC 2 cut(s) 2404, 2794
HindII GTYRAC 2 cut(s) 2404, 2794
HindIII AAGCTT 5 cut(s) 676, 739, 917, 2289, 2813
HpaI GTTAAC 1 cut(s) 2404
HpaII CCGG 3 cut(s) 320, 1165, 2777
HphI GGTGA 2 cut(s) 1291, 2738
Hpy166II GTNNAC 9 cut(s) 39, 58, 170, 262, 817, 869, 1814, 2404, 2794
Hpy8I GTNNAC 9 cut(s) 39, 58, 170, 262, 817, 869, 1814, 2404, 2794
HpyAV CCTTC 9 cut(s) 356, 1241, 1580, 1609, 1774, 2098, 2318, 2679, 2752
HpyCH4IV ACGT 1 cut(s) 510
HpyF10VI GCNNNNNNNGC 5 cut(s) 158, 1837, 2393, 2665, 2812
HpyF3I CTNAG 8 cut(s) 219, 1548, 1627, 1827, 1841, 1923, 2417, 2495
HpySE526I ACGT 1 cut(s) 510
Hsp92II CATG 4 cut(s) 1835, 2129, 2275, 2641
HspAI GCGC 2 cut(s) 182, 2203
Kpn2I TCCGGA 2 cut(s) 319, 1164
KspAI GTTAAC 1 cut(s) 2404
LmnI GCTCC 2 cut(s) 416, 964
Lsp1109I GCAGC 7 cut(s) 87, 530, 1361, 1654, 1657, 1732, 2652
LweI GCATC 5 cut(s) 1336, 1382, 1576, 1954, 2311
MabI ACCWGGT 1 cut(s) 834
MaeI CTAG 7 cut(s) 1325, 1562, 1706, 2039, 2535, 2543, 2561
MaeII ACGT 1 cut(s) 510
MaeIII GTNAC 5 cut(s) 670, 807, 937, 1048, 1279
MfeI CAATTG 1 cut(s) 2299
MflI RGATCY 4 cut(s) 244, 1472, 1659, 2683
MhlI GDGCHC 5 cut(s) 399, 413, 871, 954, 2398
MlyI GAGTC 5 cut(s) 245, 257, 1521, 2522, 2597
MmeI TCCRAC 4 cut(s) 291, 598, 862, 1447
Mph1103I ATGCAT 1 cut(s) 2326
MroI TCCGGA 2 cut(s) 319, 1164
MroXI GAANNNNTTC 2 cut(s) 1230, 2647
MslI CAYNNNNRTG 4 cut(s) 53, 1460, 1682, 2642
MspA1I CMGCKG 1 cut(s) 787
MspCI CTTAAG 1 cut(s) 923
MspI CCGG 3 cut(s) 320, 1165, 2777
MspR9I CCNGG 4 cut(s) 836, 963, 1379, 1634
MunI CAATTG 1 cut(s) 2299
Mva1269I GAATGC 2 cut(s) 1625, 2583
MvaI CCWGG 4 cut(s) 836, 963, 1379, 1634
MwoI GCNNNNNNNGC 5 cut(s) 158, 1837, 2393, 2665, 2812
NlaIII CATG 4 cut(s) 1835, 2129, 2275, 2641
NlaIV GGNNCC 2 cut(s) 2540, 2739
NmuCI GTSAC 2 cut(s) 1048, 1279
NsiI ATGCAT 1 cut(s) 2326
OliI CACNNNNGTG 1 cut(s) 53
PasI CCCWGGG 1 cut(s) 1378
PctI GAATGC 2 cut(s) 1625, 2583
PdmI GAANNNNTTC 2 cut(s) 1230, 2647
PfeI GAWTC 7 cut(s) 128, 1183, 1226, 1442, 1718, 2190, 2230
PflMI CCANNNNNTGG 1 cut(s) 1307
PfoI TCCNGGA 1 cut(s) 961
PkrI GCNGC 8 cut(s) 77, 520, 1351, 1669, 1672, 1747, 2386, 2667
PleI GAGTC 5 cut(s) 245, 257, 1520, 2522, 2597
PpsI GAGTC 5 cut(s) 245, 257, 1520, 2522, 2597
PshAI GACNNNNGTC 2 cut(s) 569, 653
Psp6I CCWGG 4 cut(s) 834, 961, 1377, 1632
PspFI CCCAGC 2 cut(s) 1101, 2164
PspGI CCWGG 4 cut(s) 834, 961, 1377, 1632
PspN4I GGNNCC 2 cut(s) 2540, 2739
PspPI GGNCC 3 cut(s) 655, 718, 1960
PsrI GAACNNNNNNTAC 2 cut(s) 2730, 2762
PstNI CAGNNNCTG 1 cut(s) 860
PsuI RGATCY 4 cut(s) 244, 1472, 1659, 2683
RseI CAYNNNNRTG 4 cut(s) 53, 1460, 1682, 2642
SatI GCNGC 8 cut(s) 76, 519, 1350, 1668, 1671, 1746, 2385, 2666
Sau96I GGNCC 3 cut(s) 655, 718, 1960
SchI GAGTC 5 cut(s) 245, 257, 1521, 2522, 2597
ScrFI CCNGG 4 cut(s) 836, 963, 1379, 1634
SduI GDGCHC 5 cut(s) 399, 413, 871, 954, 2398
SexAI ACCWGGT 1 cut(s) 834
SfaNI GCATC 5 cut(s) 1336, 1382, 1576, 1954, 2311
SfcI CTRYAG 4 cut(s) 861, 1154, 1491, 1807
SinI GGWCC 2 cut(s) 655, 718
SmiMI CAYNNNNRTG 4 cut(s) 53, 1460, 1682, 2642
SmlI CTYRAG 2 cut(s) 923, 2687
SmoI CTYRAG 2 cut(s) 923, 2687
SsiI CCGC 3 cut(s) 787, 1963, 2385
SspI AATATT 3 cut(s) 433, 1339, 1399
SspMI CTAG 7 cut(s) 1325, 1562, 1706, 2039, 2535, 2543, 2561
StyD4I CCNGG 4 cut(s) 834, 961, 1377, 1632
StyI CCWWGG 1 cut(s) 414
TaiI ACGT 1 cut(s) 513
TaqI TCGA 7 cut(s) 103, 282, 841, 1387, 1750, 1997, 2531
TatI WGTACW 5 cut(s) 346, 373, 1081, 1189, 2504
TauI GCSGC 1 cut(s) 2387
TfiI GAWTC 7 cut(s) 128, 1183, 1226, 1442, 1718, 2190, 2230
TseFI GTSAC 2 cut(s) 1048, 1279
TseI GCWGC 7 cut(s) 75, 518, 1349, 1667, 1670, 1745, 2665
Tsp45I GTSAC 2 cut(s) 1048, 1279
TspGWI ACGGA 2 cut(s) 1792, 1906
Van91I CCANNNNNTGG 1 cut(s) 1307
Vha464I CTTAAG 1 cut(s) 923
VneI GTGCAC 1 cut(s) 867
VpaK11BI GGWCC 2 cut(s) 655, 718
XapI RAATTY 6 cut(s) 1025, 1113, 1264, 2002, 2047, 2078
XbaI TCTAGA 2 cut(s) 1324, 2560
XmiI GTMKAC 1 cut(s) 261
XmnI GAANNNNTTC 2 cut(s) 1230, 2647
XspI CTAG 7 cut(s) 1325, 1562, 1706, 2039, 2535, 2543, 2561
Zsp2I ATGCAT 1 cut(s) 2326
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.