FvH4_1g15160

disease resistance

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Forward (+)
8582013 .. 8589284
7272 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g15160.t4

Sequence Viewer

Length: 2457 bp
ATGGTATTAGTCAAACGAGAAGCTTTAGAAGCGTCATTTCTGGCGCTGTATGATGCCATTAAGGAAGTTAATGACCATCACTTACTGTTTAAAACCCTCCTTGGAGATATCAGATCCACACTAGACTGTATAGAACCACTGATCAAAGAGACAGTAGAGGATGCAAAGGAATTGGATTTTCCAGAGGATGAACTTCATAACTTTAGAGTACAAATGGAGGAGGGGATTGAGCTCATTCGTAAGTGCTCTAAGGTTGCTCCACTGAGTACTGACGAAAAATATATATACAGAAACAAACTAGGTCAACTGGGCAAATCTCTGCAAAGATTGTTGGATATCCTGAAAGCGCATAGCATAAGAGATGTGAAGAAAACCTTAGTGACGGTAAAGAATATAGAGACTTTGGTCCAGCAAATTGATGTGAATTTTGGGGCACAAATCAATTCATCTAAACGTATTGAGGGTTGGTGTGCAATACCTGAACCTCCACCACTTGTAGTTGGATTGGAAGGGCCTTTGAAGGAATTGAAGATGAAGCTTTTCAGTGATGAGATATCAATGCTTGTATTAACTGCCCCCGGAGGATGTGGGAAAACTACATTGGCAACAAAATTTTGTCAAGACGAAGAAGTCAGAGATAAATTCAAGAACAATATCTTCTTTGTAACTGTTTCCAAGAAGCCCAACTTAAACCTTATTGTAGAAGAGCTATATCAAAGCAAGGGTTCCCAGGTACCTGATTTCCAAAATGAAGTAATTGCAGTTGATTGCCTGCACGAATTTTTAAACCAAACGGGGAAAAATCCTTTACTGTTGGTTTTGGATGATGTTTGGTCTGAATCCGAATCCCTTCTTGAGATGTTTGATGAATGGAAAATGCCAAATTGCAAGATCTTGGTAACATCAAGGTTTGCATTTCCAAGATTTGGTTCTCCTTATAATTTAAAATCATTGAGTGACGAAGAAGCAATGGCTCTTTTTATTCATTCAGCATACTTGGGAGATATTAGCTCTCATGTTCCGGAAGACCTTGCTAGACAGGTACTAAAACATTGTAAGGGATTTCCGCTTGCGATTACAGTGGTTGGAAGATCACTTTGTGGGCAGCCTATAGAGATCTGGCAAAAAAGATTAATTGAATGGAGTAAAGGTTCATCTATTCTTAACTCCGATCATGATTTACTTGTTTGCCTCCAAAGCAGCTTAGATGCCTTGGAGAAAGAAAGTATTACCATCAAGGAATGTTTCCTAGACCTAAGTTCATTTCTGGAAGACCAGAGAATACCTGCTACTACCCTCATTGATATATGGGGAGAGTCGTATAAAATAGATGAAGACTGGCTTTGCATTGCAAACCTTTGTGAACTCACCAATCGAAATCTTGCTAATCTTATAGTCACTAGGAAGGATCCCAGGGAGGTGGATGGCTATTACACTGAACATTTTGTTACTCTTCATGACATTCTTAGAGAATTGGCTATCTATCTGTCAAGTGTGGAATCAATAGAACAGAGAAAAAGGCTGATAATAGATATGTCTGGAGACCATTTTCCTGAGTGGTGGACAGAACAGAAGTGTCAACCTATCAATGCCCACCTTTTATCTATCTCAACAGATGGAAACTTCTCGTCTAAATGGCCCAACATGCAACTACCACAAGCAGAGGTTGTAATTCTGAACTTTCAGTCAAAGAAATATGCCCTACCCACATTTCTGGAGAAAATGGACAAATTAAAGGTTCTGATAGTCACAAAATATGGTCTTTTGCCTGGTGAATTAGATAATTTTCCATTACTGGGGTCACTGTTGCATCTAAAGAGAATCAGATTCGAACGAATTTCAATACCTTCCATAAGCAAGAGCCCTGTACAGTTGGAGAGTTTAGAAAAGATATCGTTATTCATGTGCAAAATTGGTCAAGCTTTTAGCAACTGTGCCGTCAAACTTGTTGATCTATTGCCAAATGTAGTGGAAATGAACATTGATTACTGCAATGATTTGGTGGAATTGCCTGCAATGCTCTGTGACCTGATATCCTTGAAAAAGCTCAGTATCACCAACTCCCATAAGCTGTCTGCCTTACCTGAAGAAATAGGAAAATTGGTAAACTTAGAAATGTTGAGGCTTAGGTCCTGTACAGACTTGTCAGAGTTTCCGGACTCAATTCAGAGCCTCATAAACTTAACCTATCTTGACATCTCTGATTGCTTCAGTATCAAGGAGTTGCCTGAACATATAGGTGGAATGCGCAGCTTAGAAGTACTCAACATGAGACAATGCTCAAGACTGCAAGAGCTGCCTACATCAGTTTTGAATCTTGAACAGTTAAAGGAGGTGATATGTGATGAAGAGACTCGTGTTCTATGGGAGCCCTTCTTATCTGTTCTGAAATACACACACGTAAGGGTGGTGAAAGACGATATAAATCTGAATTGGCTGCACAAGTTTCCAACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

819

Amino Acids

93.35

Weight (kDa)

5.27

Isoelectric Point (pI)

43.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RPW8 PF05659 8 - 136 7.7e-18 Arabidopsis broad-spectrum mildew resistance protein RPW8
NB-ARC PF00931 171 - 327 1e-16 NB-ARC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 939
AasI GACNNNNNNGTC 1 cut(s) 629
Acc16I TGCGCA 1 cut(s) 2249
Acc36I ACCTGC 1 cut(s) 1294
Acc65I GGTACC 1 cut(s) 733
AccB1I GGYRCC 1 cut(s) 733
AccB7I CCANNNNNTGG 1 cut(s) 926
AccIII TCCGGA 2 cut(s) 1021, 2155
AciI CCGC 1 cut(s) 1067
AclWI GGATC 3 cut(s) 108, 1403, 1416
AcsI RAATTY 5 cut(s) 424, 611, 641, 779, 1836
AcuI CTGAAG 2 cut(s) 2106, 2194
AdeI CACNNNGTG 1 cut(s) 1100
AfaI GTAC 7 cut(s) 210, 268, 735, 1044, 1869, 2137, 2262
AfiI CCNNNNNNNGG 2 cut(s) 926, 1796
AflIII ACRYGT 1 cut(s) 2398
AgsI TTSAA 8 cut(s) 520, 529, 646, 1139, 1842, 2041, 2314, 2321
AjnI CCWGG 3 cut(s) 729, 1412, 1768
AjuI GAANNNNNNNTTGG 4 cut(s) 584, 616, 913, 945
AloI GAACNNNNNNTCC 2 cut(s) 1135, 1167
Alw21I GWGCWC 2 cut(s) 234, 248
Alw26I GTCTC 5 cut(s) 143, 392, 1536, 2266, 2345
AlwI GGATC 3 cut(s) 108, 1403, 1416
Aor13HI TCCGGA 2 cut(s) 1021, 2155
AoxI GGCC 2 cut(s) 512, 1637
ApeKI GCWGC 5 cut(s) 1105, 1200, 2250, 2296, 2437
ApoI RAATTY 5 cut(s) 424, 611, 641, 779, 1836
AseI ATTAAT 1 cut(s) 1133
Asp700I GAANNNNTTC 2 cut(s) 539, 849
Asp718I GGTACC 1 cut(s) 733
AspLEI GCGC 3 cut(s) 46, 349, 2250
AspS9I GGNCC 4 cut(s) 406, 512, 1638, 2130
AsuC2I CCSGG 1 cut(s) 579
AsuHPI GGTGA 5 cut(s) 1360, 1784, 2047, 2347, 2422
AsuII TTCGAA 1 cut(s) 1830
AvaII GGWCC 2 cut(s) 406, 2130
BaeGI GKGCMC 1 cut(s) 436
BamHI GGATCC 1 cut(s) 1408
BanI GGYRCC 1 cut(s) 733
BanII GRGCYC 3 cut(s) 234, 1865, 2373
BauI CACGAG 1 cut(s) 2355
BbsI GAAGAC 3 cut(s) 1032, 1278, 1341
Bbv12I GWGCWC 2 cut(s) 234, 248
BbvI GCAGC 5 cut(s) 1117, 1212, 2262, 2283, 2424
BccI CCATC 4 cut(s) 84, 1241, 1418, 1610
BceAI ACGGC 1 cut(s) 1922
BciT130I CCWGG 3 cut(s) 731, 1414, 1770
BclI TGATCA 1 cut(s) 141
BcnI CCSGG 1 cut(s) 579
BcoDI GTCTC 5 cut(s) 143, 392, 1536, 2266, 2345
BfaI CTAG 5 cut(s) 122, 299, 1035, 1250, 1401
BfmI CTRYAG 1 cut(s) 1110
BfoI RGCGCY 1 cut(s) 47
BfuAI ACCTGC 1 cut(s) 1294
BglII AGATCT 2 cut(s) 891, 1116
BisI GCNGC 5 cut(s) 1106, 1201, 2251, 2297, 2438
BlsI GCNGC 5 cut(s) 1107, 1202, 2252, 2298, 2439
BmcAI AGTACT 2 cut(s) 268, 2262
Bme1390I CCNGG 4 cut(s) 579, 731, 1414, 1770
Bme18I GGWCC 2 cut(s) 406, 2130
BmgT120I GGNCC 4 cut(s) 406, 512, 1638, 2130
BmiI GGNNCC 4 cut(s) 727, 735, 1410, 2370
BmrFI CCNGG 4 cut(s) 579, 731, 1414, 1770
BmrI ACTGGG 2 cut(s) 317, 1805
BmsI GCATC 4 cut(s) 43, 151, 1198, 1819
BmuI ACTGGG 2 cut(s) 317, 1805
BoxI GACNNNNGTC 1 cut(s) 404
BpiI GAAGAC 3 cut(s) 1032, 1278, 1341
BpmI CTGGAG 2 cut(s) 1560, 1736
Bpu10I CCTNAGC 1 cut(s) 2126
Bpu14I TTCGAA 1 cut(s) 1830
BpuEI CTTGAG 2 cut(s) 875, 2266
BpuMI CCSGG 1 cut(s) 579
BsaAI YACGTR 1 cut(s) 2401
BsaBI GATNNNNATC 1 cut(s) 2424
BsaI GGTCTC 1 cut(s) 1536
BsaJI CCNNGG 6 cut(s) 100, 577, 729, 1212, 1412, 1413
BsaWI WCCGGW 2 cut(s) 1021, 2155
BsaXI ACNNNNNCTCC 2 cut(s) 1135, 1165
Bsc4I CCNNNNNNNGG 2 cut(s) 926, 1796
Bse1I ACTGG 3 cut(s) 312, 1343, 1800
Bse3DI GCAATG 4 cut(s) 975, 1347, 1999, 2022
Bse8I GATNNNNATC 1 cut(s) 2424
BseAI TCCGGA 2 cut(s) 1021, 2155
BseBI CCWGG 3 cut(s) 731, 1414, 1770
BseDI CCNNGG 6 cut(s) 100, 577, 729, 1212, 1412, 1413
BseGI GGATG 5 cut(s) 166, 193, 590, 829, 1429
BseJI GATNNNNATC 1 cut(s) 2424
BseLI CCNNNNNNNGG 2 cut(s) 926, 1796
BseMI GCAATG 4 cut(s) 975, 1347, 1999, 2022
BseMII CTCAG 3 cut(s) 254, 1545, 2062
BseNI ACTGG 3 cut(s) 312, 1343, 1800
BseRI GAGGAG 1 cut(s) 233
BseSI GKGCMC 1 cut(s) 436
BseXI GCAGC 5 cut(s) 1117, 1212, 2262, 2283, 2424
BsgI GTGCAG 2 cut(s) 758, 2423
BshFI GGCC 2 cut(s) 514, 1639
BshNI GGYRCC 1 cut(s) 733
BsiHKAI GWGCWC 2 cut(s) 234, 248
BsiSI CCGG 3 cut(s) 579, 1022, 2156
BslI CCNNNNNNNGG 2 cut(s) 926, 1796
BsmAI GTCTC 5 cut(s) 143, 392, 1536, 2266, 2345
BsmI GAATGC 1 cut(s) 2250
BsnI GGCC 2 cut(s) 514, 1639
Bso31I GGTCTC 1 cut(s) 1536
Bsp119I TTCGAA 1 cut(s) 1830
Bsp1286I GDGCHC 5 cut(s) 234, 248, 436, 1865, 2373
Bsp13I TCCGGA 2 cut(s) 1021, 2155
Bsp1407I TGTACA 2 cut(s) 1867, 2135
Bsp143I GATC 8 cut(s) 113, 141, 891, 1091, 1116, 1171, 1408, 1951
BspACI CCGC 1 cut(s) 1067
BspANI GGCC 2 cut(s) 514, 1639
BspCNI CTCAG 3 cut(s) 255, 1546, 2061
BspEI TCCGGA 2 cut(s) 1021, 2155
BspHI TCATGA 2 cut(s) 1174, 1456
BspLI GGNNCC 4 cut(s) 727, 735, 1410, 2370
BspMI ACCTGC 1 cut(s) 1294
BspPI GGATC 3 cut(s) 108, 1403, 1416
BspQI GCTCTTC 1 cut(s) 699
BspT104I TTCGAA 1 cut(s) 1830
BspT107I GGYRCC 1 cut(s) 733
BspTNI GGTCTC 1 cut(s) 1536
BsrDI GCAATG 4 cut(s) 975, 1347, 1999, 2022
BsrGI TGTACA 2 cut(s) 1867, 2135
BsrI ACTGG 3 cut(s) 312, 1343, 1800
BssECI CCNNGG 6 cut(s) 100, 577, 729, 1212, 1412, 1413
BssMI GATC 8 cut(s) 113, 141, 891, 1091, 1116, 1171, 1408, 1951
BssSI CACGAG 1 cut(s) 2355
BssT1I CCWWGG 2 cut(s) 100, 1212
Bst2BI CACGAG 1 cut(s) 2355
Bst2UI CCWGG 3 cut(s) 731, 1414, 1770
Bst6I CTCTTC 3 cut(s) 699, 1458, 2343
BstAPI GCANNNNNTGC 1 cut(s) 2296
BstAUI TGTACA 2 cut(s) 1867, 2135
BstBAI YACGTR 1 cut(s) 2401
BstBI TTCGAA 1 cut(s) 1830
BstC8I GCNNGC 3 cut(s) 773, 1071, 2013
BstF5I GGATG 5 cut(s) 166, 193, 590, 829, 1429
BstH2I RGCGCY 1 cut(s) 47
BstHHI GCGC 3 cut(s) 46, 349, 2250
BstKTI GATC 8 cut(s) 116, 144, 894, 1094, 1119, 1174, 1411, 1954
BstMAI GTCTC 5 cut(s) 143, 392, 1536, 2266, 2345
BstMBI GATC 8 cut(s) 113, 141, 891, 1091, 1116, 1171, 1408, 1951
BstMWI GCNNNNNNNGC 5 cut(s) 29, 1197, 1645, 2017, 2296
BstNI CCWGG 3 cut(s) 731, 1414, 1770
BstNSI RCATGY 1 cut(s) 1648
BstPAI GACNNNNGTC 1 cut(s) 404
BstSCI CCNGG 4 cut(s) 577, 729, 1412, 1768
BstSFI CTRYAG 1 cut(s) 1110
BstSLI GKGCMC 1 cut(s) 436
BstV1I GCAGC 5 cut(s) 1117, 1212, 2262, 2283, 2424
BstV2I GAAGAC 3 cut(s) 1032, 1278, 1341
BstX2I RGATCY 4 cut(s) 113, 891, 1116, 1408
BstXI CCANNNNNNTGG 2 cut(s) 1420, 1714
BstYI RGATCY 4 cut(s) 113, 891, 1116, 1408
BsuRI GGCC 2 cut(s) 514, 1639
BtsCI GGATG 5 cut(s) 166, 193, 590, 829, 1429
BtsIMutI CAGTG 6 cut(s) 137, 260, 550, 1086, 1434, 1802
BveI ACCTGC 1 cut(s) 1294
Cac8I GCNNGC 3 cut(s) 773, 1071, 2013
CciI TCATGA 2 cut(s) 1174, 1456
CfoI GCGC 3 cut(s) 46, 349, 2250
Cfr13I GGNCC 4 cut(s) 406, 512, 1638, 2130
CseI GACGC 1 cut(s) 21
Csp6I GTAC 7 cut(s) 209, 267, 734, 1043, 1868, 2136, 2261
CspCI CAANNNNNGTGG 2 cut(s) 1950, 1985
CviAII CATG 6 cut(s) 1016, 1175, 1457, 1645, 1903, 2269
CviQI GTAC 7 cut(s) 209, 267, 734, 1043, 1868, 2136, 2261
DpnI GATC 8 cut(s) 115, 143, 893, 1093, 1118, 1173, 1410, 1953
DpnII GATC 8 cut(s) 113, 141, 891, 1091, 1116, 1171, 1408, 1951
DraI TTTAAA 3 cut(s) 91, 786, 945
DraIII CACNNNGTG 1 cut(s) 1100
DrdI GACNNNNNNGTC 1 cut(s) 629
DseDI GACNNNNNNGTC 1 cut(s) 629
Eam1104I CTCTTC 3 cut(s) 699, 1458, 2343
EarI CTCTTC 3 cut(s) 699, 1458, 2343
Ecl136II GAGCTC 1 cut(s) 232
Eco130I CCWWGG 2 cut(s) 100, 1212
Eco24I GRGCYC 3 cut(s) 234, 1865, 2373
Eco31I GGTCTC 1 cut(s) 1536
Eco32I GATATC 5 cut(s) 109, 337, 555, 1893, 2034
Eco47I GGWCC 2 cut(s) 406, 2130
Eco53kI GAGCTC 1 cut(s) 232
Eco57I CTGAAG 2 cut(s) 2106, 2194
EcoICRI GAGCTC 1 cut(s) 232
EcoO109I RGGNCCY 2 cut(s) 512, 2130
EcoRII CCWGG 3 cut(s) 729, 1412, 1768
EcoRV GATATC 5 cut(s) 109, 337, 555, 1893, 2034
EcoT14I CCWWGG 2 cut(s) 100, 1212
EcoT38I GRGCYC 3 cut(s) 234, 1865, 2373
ErhI CCWWGG 2 cut(s) 100, 1212
FaeI CATG 6 cut(s) 1019, 1178, 1460, 1648, 1906, 2272
FalI AAGNNNNNCTT 6 cut(s) 359, 391, 671, 703, 1326, 1358
FatI CATG 6 cut(s) 1015, 1174, 1456, 1644, 1902, 2268
FbaI TGATCA 1 cut(s) 141
Fnu4HI GCNGC 5 cut(s) 1106, 1201, 2251, 2297, 2438
FokI GGATG 5 cut(s) 173, 200, 597, 836, 1436
FriOI GRGCYC 3 cut(s) 234, 1865, 2373
Fsp4HI GCNGC 5 cut(s) 1106, 1201, 2251, 2297, 2438
FspBI CTAG 5 cut(s) 122, 299, 1035, 1250, 1401
FspI TGCGCA 1 cut(s) 2249
GlaI GCGC 3 cut(s) 45, 348, 2249
GluI GCNGC 5 cut(s) 1106, 1201, 2251, 2297, 2438
GsuI CTGGAG 2 cut(s) 1560, 1736
HaeII RGCGCY 1 cut(s) 47
HaeIII GGCC 2 cut(s) 514, 1639
HapII CCGG 3 cut(s) 579, 1022, 2156
HgaI GACGC 1 cut(s) 21
HhaI GCGC 3 cut(s) 46, 349, 2250
Hin1II CATG 6 cut(s) 1019, 1178, 1460, 1648, 1906, 2272
Hin6I GCGC 3 cut(s) 44, 347, 2248
HinP1I GCGC 3 cut(s) 44, 347, 2248
HincII GTYRAC 2 cut(s) 305, 1580
HindII GTYRAC 2 cut(s) 305, 1580
HindIII AAGCTT 3 cut(s) 21, 536, 1920
HinfI GANTC 9 cut(s) 839, 845, 1316, 1499, 1821, 1827, 2159, 2314, 2353
HpaII CCGG 3 cut(s) 579, 1022, 2156
HphI GGTGA 5 cut(s) 1360, 1784, 2047, 2347, 2422
Hpy166II GTNNAC 5 cut(s) 305, 1364, 1563, 1580, 2107
Hpy8I GTNNAC 5 cut(s) 305, 1364, 1563, 1580, 2107
HpyAV CCTTC 6 cut(s) 503, 514, 860, 1399, 1857, 2383
HpyCH4IV ACGT 2 cut(s) 454, 2400
HpyF10VI GCNNNNNNNGC 5 cut(s) 29, 1197, 1645, 2017, 2296
HpySE526I ACGT 2 cut(s) 454, 2400
Hsp92II CATG 6 cut(s) 1019, 1178, 1460, 1648, 1906, 2272
HspAI GCGC 3 cut(s) 44, 347, 2248
Kpn2I TCCGGA 2 cut(s) 1021, 2155
KpnI GGTACC 1 cut(s) 737
Ksp22I TGATCA 1 cut(s) 141
Kzo9I GATC 8 cut(s) 113, 141, 891, 1091, 1116, 1171, 1408, 1951
LguI GCTCTTC 1 cut(s) 699
LmnI GCTCC 2 cut(s) 262, 2368
Lsp1109I GCAGC 5 cut(s) 1117, 1212, 2262, 2283, 2424
LweI GCATC 4 cut(s) 43, 151, 1198, 1819
MaeI CTAG 5 cut(s) 122, 299, 1035, 1250, 1401
MaeII ACGT 2 cut(s) 454, 2400
MaeIII GTNAC 9 cut(s) 379, 664, 898, 956, 1396, 1447, 1747, 1800, 2024
MalI GATC 8 cut(s) 115, 143, 893, 1093, 1118, 1173, 1410, 1953
MboI GATC 8 cut(s) 113, 141, 891, 1091, 1116, 1171, 1408, 1951
MflI RGATCY 4 cut(s) 113, 891, 1116, 1408
MhlI GDGCHC 5 cut(s) 234, 248, 436, 1865, 2373
MlyI GAGTC 3 cut(s) 1325, 2153, 2347
MmeI TCCRAC 4 cut(s) 312, 481, 1066, 1854
MroI TCCGGA 2 cut(s) 1021, 2155
MroXI GAANNNNTTC 2 cut(s) 539, 849
MslI CAYNNNNRTG 1 cut(s) 2238
MspI CCGG 3 cut(s) 579, 1022, 2156
MspR9I CCNGG 4 cut(s) 579, 731, 1414, 1770
Mva1269I GAATGC 1 cut(s) 2250
MvaI CCWGG 3 cut(s) 731, 1414, 1770
MwoI GCNNNNNNNGC 5 cut(s) 29, 1197, 1645, 2017, 2296
NciI CCSGG 1 cut(s) 579
NdeII GATC 8 cut(s) 113, 141, 891, 1091, 1116, 1171, 1408, 1951
NlaIII CATG 6 cut(s) 1019, 1178, 1460, 1648, 1906, 2272
NlaIV GGNNCC 4 cut(s) 727, 735, 1410, 2370
NmuCI GTSAC 6 cut(s) 379, 956, 1396, 1747, 1800, 2024
NsbI TGCGCA 1 cut(s) 2249
NspI RCATGY 1 cut(s) 1648
NspV TTCGAA 1 cut(s) 1830
PagI TCATGA 2 cut(s) 1174, 1456
PasI CCCWGGG 1 cut(s) 1413
PciSI GCTCTTC 1 cut(s) 699
PctI GAATGC 1 cut(s) 2250
PdmI GAANNNNTTC 2 cut(s) 539, 849
PfeI GAWTC 6 cut(s) 839, 845, 1499, 1821, 1827, 2314
PflMI CCANNNNNTGG 1 cut(s) 926
PkrI GCNGC 5 cut(s) 1107, 1202, 2252, 2298, 2439
PleI GAGTC 3 cut(s) 1324, 2153, 2347
PpsI GAGTC 3 cut(s) 1324, 2153, 2347
Ppu21I YACGTR 1 cut(s) 2401
PpuMI RGGWCCY 1 cut(s) 2130
PshAI GACNNNNGTC 1 cut(s) 404
PshBI ATTAAT 1 cut(s) 1133
PsiI TTATAA 1 cut(s) 939
Psp124BI GAGCTC 1 cut(s) 234
Psp5II RGGWCCY 1 cut(s) 2130
Psp6I CCWGG 3 cut(s) 729, 1412, 1768
PspGI CCWGG 3 cut(s) 729, 1412, 1768
PspN4I GGNNCC 4 cut(s) 727, 735, 1410, 2370
PspPI GGNCC 4 cut(s) 406, 512, 1638, 2130
PspPPI RGGWCCY 1 cut(s) 2130
PsrI GAACNNNNNNTAC 2 cut(s) 1970, 2002
PsuI RGATCY 4 cut(s) 113, 891, 1116, 1408
RsaI GTAC 7 cut(s) 210, 268, 735, 1044, 1869, 2137, 2262
RsaNI GTAC 7 cut(s) 209, 267, 734, 1043, 1868, 2136, 2261
RseI CAYNNNNRTG 1 cut(s) 2238
SacI GAGCTC 1 cut(s) 234
SapI GCTCTTC 1 cut(s) 699
SatI GCNGC 5 cut(s) 1106, 1201, 2251, 2297, 2438
Sau3AI GATC 8 cut(s) 113, 141, 891, 1091, 1116, 1171, 1408, 1951
Sau96I GGNCC 4 cut(s) 406, 512, 1638, 2130
ScaI AGTACT 2 cut(s) 268, 2262
SchI GAGTC 3 cut(s) 1325, 2153, 2347
ScrFI CCNGG 4 cut(s) 579, 731, 1414, 1770
SduI GDGCHC 5 cut(s) 234, 248, 436, 1865, 2373
SfaNI GCATC 4 cut(s) 43, 151, 1198, 1819
SfcI CTRYAG 1 cut(s) 1110
SfuI TTCGAA 1 cut(s) 1830
SinI GGWCC 2 cut(s) 406, 2130
SmiMI CAYNNNNRTG 1 cut(s) 2238
SmlI CTYRAG 2 cut(s) 854, 2281
SmoI CTYRAG 2 cut(s) 854, 2281
SsiI CCGC 1 cut(s) 1067
SspMI CTAG 5 cut(s) 122, 299, 1035, 1250, 1401
SstI GAGCTC 1 cut(s) 234
StyD4I CCNGG 4 cut(s) 577, 729, 1412, 1768
StyI CCWWGG 2 cut(s) 100, 1212
TaiI ACGT 2 cut(s) 457, 2403
TaqI TCGA 2 cut(s) 1375, 1830
TatI WGTACW 5 cut(s) 208, 266, 1867, 2135, 2260
TfiI GAWTC 6 cut(s) 839, 845, 1499, 1821, 1827, 2314
TscAI CASTG 6 cut(s) 144, 267, 550, 1086, 1441, 1809
TseFI GTSAC 6 cut(s) 379, 956, 1396, 1747, 1800, 2024
TseI GCWGC 5 cut(s) 1105, 1200, 2250, 2296, 2437
Tsp45I GTSAC 6 cut(s) 379, 956, 1396, 1747, 1800, 2024
TspRI CASTG 6 cut(s) 144, 267, 550, 1086, 1441, 1809
Van91I CCANNNNNTGG 1 cut(s) 926
VpaK11BI GGWCC 2 cut(s) 406, 2130
VspI ATTAAT 1 cut(s) 1133
XapI RAATTY 5 cut(s) 424, 611, 641, 779, 1836
XceI RCATGY 1 cut(s) 1648
XmnI GAANNNNTTC 2 cut(s) 539, 849
XspI CTAG 5 cut(s) 122, 299, 1035, 1250, 1401
ZrmI AGTACT 2 cut(s) 268, 2262
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.