Prupe.7G139800_v2.0.a1

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0000039
Physical Location & Seq
Reverse (-)
15565650 .. 15569496
3847 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G139800.1

Sequence Viewer

Length: 2385 bp
ATGGATCTTTTTGCCGGGGGTGCTGTAGGAACGTTGTTCACTGTGCTGTATGAAGTAGTTAAGGATGTGAAGGACAAGACCATGATGTTTAAATCCCTCCTCGGAGATCTCAAATCCACGCTAGATTCTTTGAAACCGCTGATCGAAGACATAGAAAAGTACAACAATTTGATGGATCGTCCAAAGGAAGAACTAGAAAATTTCAAAGAAAAAATGAAGAATGGTGCTGTGCTTGTTCCCAAGTGCTCCACTGTTAGCCGGTGGAATACGTACAAAAAGTATAAATATGCCAAAAAGCTTCTTGATTTGGACCAATGTCTGAATAGACTGTTAACCATACTGAACGTTGGGGGAGTAAGGGATGGGAAGGAGACCTTGTATAGGGTAATGAACATTGAAGAGAAAATTGATAAATTGCAAATAAAAGAAGAGGTTGTGTTGCCAAAAAAATTGGACATCAAAGCTTGGTGTGCAGTACCTGAACTTCCACCTGTTACAGTCGGATTGGACGAGCCTTTGAGGGATTTGAAGAAGAAGCTTCTTAAGGACAATGTGTCAATGCTTGTGCTGACTGCTCATGGAGGATCCGGGAAAACCACATTGGCAACAAAGTTCTGTCATGATAAGGAAGTTAAAGATAAATTCAACAACAATATCTTCTTTGTCATTGTTTCAAAAAAGCCCAACTTAGACTTTGTAGAAGAAGTATATCAAAGCATGAATTCAGAGGATGCAAGACAAAATCCTCTGTTGTTGATCCTGGATGATGTTTGGTTAGGATCCATATCTCTTCTTCAGAAATTTGATGGATTGAAAGGGCCAAATGGCAAGATTTTGGTGACATCAAGATCCGAGTTTCCAGGATTTGGTACTCCGTATTTTCTAGAATCATTGAATGATAAAGATTCAATGACTCTTTTTCATCATTCAGCATCTCTGGGAAACAGGAGCTCTAGTATTCCAGAAGATCTTCTGAGAAAGATAGTAGATCGCTGTAACGGATTTCCACTTGCCATTACAGTGACCGGAAACTCACTTCGCGGACAAGCTACAGAGTTCTGGCGTAAAAGACTGAGAGACTGGTCTAAAAGTTCTATTCTTGATATTGAGACTGAGTTGCTTCTTCGCCTTCAAAGTAGCATAGATGCCTTGGATGAAAAAGATGCTATCATCAAAGAATGTTTCATGGACCTTGGTTCATTTCCTGAAGACCAAAGAATCCCTGCTGCTGCTGTCATTGATATGTGGGCAGAGTTATATGAGCTAGATGAAGACTTTCTGTCCATTACAAACCTCCTCGAGCTCACCACTAGAAGTCTGGCAAATCTTGTGATCACCAGGAAGGAGAATATGGAGATGGTGGATGACTACTACGTTGAACACTTCGTTACCCAGCATGATATGCTCAGAGAGCTGGCTGTCTATAATGCAAAACTAGACCCAATAGAACAGAGAAAAAGACTGATTGTAGACATAAGTGGAGACAATGAACCCAAGTGGTTGACAGAACAGAAGTCTCAACCCATCAAGGCTCGCCTCTTATCTATCTCCTCTGATGGAGTGTTTTCAACAAAATGGCAGAGCATTCAACTACCAGAGGTTGAGGTCCTAGTTTTGAATATTCAGACAAAGAACTATGCCTTGCCTCAATTTGTGGAGAAAATTGACAAAATGAAGGTTCTAATAGTCACAAATTACAGTTCATTACCTGCTGAATTGAGTAATTTTGAGCTACTGGGTTCATTATCAAATCTGAAGAGAATCAGATTAGAGCGCATTTCGATTCCTTCCATAACCAAGAACCCCATACAATTTCGGAGTCTAAAGAAAATTTCTTTATTCATGTGTAACATCGGTCAAGCTTTGAGCAATTGTTCAGTCAAAATTTCAGATGCATTCCCAAATTTAGAGGAAATGAATATTGACTATTGCCATGATTTGGTGGAATTGCCAACCGAGGTCTGTGATCTAATTCATTTAAAGAAGCTCAGCATCACCAACTGCCATAATCTATATGCCTTGCCTGAACGGATTGGGAAGCTGGCCAATTTACTAGTGTTGAGGTTAAGGTCCTGTACAGACTTGGTAAAACTTCCAGGCTCGATGAAGAACCTCAAAAAGTTAGTCTTTCTTGACATATCTGATTGCTTCAGCATTAGGGAGTTGCCTGAAGACATTGGTGAAATAAGCAATTTAAGAAATATCAACATGAGACAGTGCTCAAGATTGCAAGAGTTGCCTCTATCAGTTTTTGATCTCGAGCAGTTAGAGGAAGTGATATGTGACGAAGAGACAGGAAGTCTGTGGGAGCCCTTCTTGAACTGTCTCAGAAGCACACGCATAATGGTGGCCAAAGAAAATATCAACCTGAATTGGCTCCAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
NB-ARC RPW8

Protein Analysis

795

Amino Acids

90.7

Weight (kDa)

5.72

Isoelectric Point (pI)

43.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1717
AccB7I CCANNNNNTGG 2 cut(s) 866, 1939
AccI GTMKAC 1 cut(s) 1470
AccII CGCG 1 cut(s) 1041
AciI CCGC 2 cut(s) 137, 1041
AclI AACGTT 2 cut(s) 32, 345
AclWI GGATC 8 cut(s) 12, 183, 579, 592, 751, 774, 787, 843
AcoI YGGCCR 2 cut(s) 2043, 2349
AcsI RAATTY 7 cut(s) 199, 641, 721, 800, 1830, 1884, 1903
AcuI CTGAAG 5 cut(s) 779, 1227, 1775, 2134, 2190
AfaI GTAC 5 cut(s) 161, 272, 477, 871, 2077
AfiI CCNNNNNNNGG 3 cut(s) 381, 866, 1939
AflII CTTAAG 1 cut(s) 542
AhdI GACNNNNNGTC 3 cut(s) 553, 1279, 2298
AhlI ACTAGT 1 cut(s) 2053
AjnI CCWGG 4 cut(s) 759, 859, 1337, 2095
AjuI GAANNNNNNNTTGG 2 cut(s) 584, 616
Alw21I GWGCWC 4 cut(s) 248, 953, 1305, 2222
Alw26I GTCTC 8 cut(s) 365, 1071, 1103, 1476, 1521, 2206, 2285, 2330
AlwI GGATC 8 cut(s) 12, 183, 579, 592, 751, 774, 787, 843
AlwNI CAGNNNCTG 1 cut(s) 479
Ama87I CYCGRG 2 cut(s) 1298, 2258
AoxI GGCC 3 cut(s) 818, 2043, 2349
ApeKI GCWGC 2 cut(s) 1226, 1229
ApoI RAATTY 7 cut(s) 199, 641, 721, 800, 1830, 1884, 1903
ArsI GACNNNNNNTTYG 2 cut(s) 2109, 2141
Asp700I GAANNNNTTC 2 cut(s) 969, 1275
AspLEI GCGC 1 cut(s) 1776
AspS9I GGNCC 5 cut(s) 310, 818, 1189, 1606, 2070
AsuC2I CCSGG 2 cut(s) 16, 589
AsuHPI GGTGA 5 cut(s) 850, 1297, 1327, 1987, 2192
AvaI CYCGRG 2 cut(s) 1298, 2258
AvaII GGWCC 4 cut(s) 310, 1189, 1606, 2070
BalI TGGCCA 2 cut(s) 2045, 2351
BamHI GGATCC 2 cut(s) 584, 779
BanII GRGCYC 3 cut(s) 953, 1305, 2313
BarI GAAGNNNNNNTAC 2 cut(s) 468, 500
BbsI GAAGAC 4 cut(s) 153, 1215, 1278, 2178
Bbv12I GWGCWC 4 cut(s) 248, 953, 1305, 2222
BbvI GCAGC 2 cut(s) 1213, 1216
BccI CCATC 6 cut(s) 166, 356, 800, 1351, 1532, 1550
BciT130I CCWGG 4 cut(s) 761, 861, 1339, 2097
BclI TGATCA 1 cut(s) 1332
BcnI CCSGG 2 cut(s) 16, 589
BcoDI GTCTC 8 cut(s) 365, 1071, 1103, 1476, 1521, 2206, 2285, 2330
BcuI ACTAGT 1 cut(s) 2053
BfaI CTAG 9 cut(s) 122, 194, 884, 954, 1265, 1311, 1436, 1610, 2054
BfmI CTRYAG 2 cut(s) 24, 1050
BfrI CTTAAG 1 cut(s) 542
BfuAI ACCTGC 1 cut(s) 1717
BglII AGATCT 2 cut(s) 106, 967
BisI GCNGC 2 cut(s) 1227, 1230
BlpI GCTNAGC 1 cut(s) 1988
BlsI GCNGC 2 cut(s) 1228, 1231
Bme1390I CCNGG 6 cut(s) 16, 589, 761, 861, 1339, 2097
Bme18I GGWCC 4 cut(s) 310, 1189, 1606, 2070
BmeRI GACNNNNNGTC 3 cut(s) 553, 1279, 2298
BmeT110I CYCGRG 2 cut(s) 1298, 2258
BmgT120I GGNCC 5 cut(s) 310, 818, 1189, 1606, 2070
BmiI GGNNCC 4 cut(s) 586, 781, 2310, 2378
BmrFI CCNGG 6 cut(s) 16, 589, 761, 861, 1339, 2097
BmrI ACTGGG 1 cut(s) 1745
BmsI GCATC 6 cut(s) 721, 941, 1135, 1153, 1882, 2001
BmuI ACTGGG 1 cut(s) 1745
BoxI GACNNNNGTC 1 cut(s) 315
BpiI GAAGAC 4 cut(s) 153, 1215, 1278, 2178
Bpu1102I GCTNAGC 1 cut(s) 1988
BpuEI CTTGAG 1 cut(s) 2206
BpuMI CCSGG 2 cut(s) 16, 589
BsaAI YACGTR 1 cut(s) 270
BsaBI GATNNNNATC 1 cut(s) 784
BsaI GGTCTC 1 cut(s) 365
BsaJI CCNNGG 5 cut(s) 15, 100, 1149, 1192, 1956
BsaWI WCCGGW 1 cut(s) 1025
BsaXI ACNNNNNCTCC 4 cut(s) 362, 392, 940, 970
Bsc4I CCNNNNNNNGG 3 cut(s) 381, 866, 1939
Bse118I RCCGGY 1 cut(s) 258
Bse1I ACTGG 2 cut(s) 1085, 1740
Bse8I GATNNNNATC 1 cut(s) 784
BseBI CCWGG 4 cut(s) 761, 861, 1339, 2097
BseDI CCNNGG 5 cut(s) 15, 100, 1149, 1192, 1956
BseGI GGATG 6 cut(s) 70, 367, 736, 769, 1159, 1369
BseJI GATNNNNATC 1 cut(s) 784
BseLI CCNNNNNNNGG 3 cut(s) 381, 866, 1939
BseMII CTCAG 6 cut(s) 965, 1064, 1104, 1420, 2002, 2341
BseNI ACTGG 2 cut(s) 1085, 1740
BseRI GAGGAG 3 cut(s) 89, 1286, 1540
BseXI GCAGC 2 cut(s) 1213, 1216
BseYI CCCAGC 1 cut(s) 1392
BsgI GTGCAG 1 cut(s) 492
Bsh1236I CGCG 1 cut(s) 1041
BshFI GGCC 3 cut(s) 820, 2045, 2351
BsiHKAI GWGCWC 4 cut(s) 248, 953, 1305, 2222
BsiHKCI CYCGRG 2 cut(s) 1298, 2258
BsiSI CCGG 4 cut(s) 15, 259, 588, 1026
BslI CCNNNNNNNGG 3 cut(s) 381, 866, 1939
BsmAI GTCTC 8 cut(s) 365, 1071, 1103, 1476, 1521, 2206, 2285, 2330
BsmI GAATGC 2 cut(s) 1584, 1895
BsnI GGCC 3 cut(s) 820, 2045, 2351
Bso31I GGTCTC 1 cut(s) 365
BsoBI CYCGRG 2 cut(s) 1298, 2258
Bsp1286I GDGCHC 5 cut(s) 248, 953, 1305, 2222, 2313
Bsp1407I TGTACA 1 cut(s) 2075
Bsp1720I GCTNAGC 1 cut(s) 1988
BspACI CCGC 2 cut(s) 137, 1041
BspANI GGCC 3 cut(s) 820, 2045, 2351
BspCNI CTCAG 6 cut(s) 966, 1065, 1105, 1419, 2001, 2340
BspFNI CGCG 1 cut(s) 1041
BspHI TCATGA 1 cut(s) 619
BspLI GGNNCC 4 cut(s) 586, 781, 2310, 2378
BspMI ACCTGC 1 cut(s) 1717
BspPI GGATC 8 cut(s) 12, 183, 579, 592, 751, 774, 787, 843
BspTI CTTAAG 1 cut(s) 542
BspTNI GGTCTC 1 cut(s) 365
BsrFI RCCGGY 1 cut(s) 258
BsrGI TGTACA 1 cut(s) 2075
BsrI ACTGG 2 cut(s) 1085, 1740
BssAI RCCGGY 1 cut(s) 258
BssECI CCNNGG 5 cut(s) 15, 100, 1149, 1192, 1956
BssT1I CCWWGG 2 cut(s) 1149, 1192
Bst2UI CCWGG 4 cut(s) 761, 861, 1339, 2097
Bst4CI ACNGT 8 cut(s) 43, 253, 330, 499, 1021, 1700, 2217, 2324
Bst6I CTCTTC 5 cut(s) 393, 423, 795, 1751, 2283
BstAFI CTTAAG 1 cut(s) 542
BstAPI GCANNNNNTGC 2 cut(s) 1402, 2236
BstAUI TGTACA 1 cut(s) 2075
BstBAI YACGTR 1 cut(s) 270
BstC8I GCNNGC 3 cut(s) 1416, 1534, 2043
BstDEI CTNAG 7 cut(s) 688, 974, 1073, 1113, 1406, 1988, 2327
BstENI CCTNNNNNAGG 1 cut(s) 379
BstF5I GGATG 6 cut(s) 70, 367, 736, 769, 1159, 1369
BstFNI CGCG 1 cut(s) 1041
BstHHI GCGC 1 cut(s) 1776
BstMAI GTCTC 8 cut(s) 365, 1071, 1103, 1476, 1521, 2206, 2285, 2330
BstMWI GCNNNNNNNGC 5 cut(s) 20, 470, 1402, 1411, 2236
BstNI CCWGG 4 cut(s) 761, 861, 1339, 2097
BstPAI GACNNNNGTC 1 cut(s) 315
BstSCI CCNGG 6 cut(s) 14, 587, 759, 859, 1337, 2095
BstSFI CTRYAG 2 cut(s) 24, 1050
BstSNI TACGTA 1 cut(s) 270
BstUI CGCG 1 cut(s) 1041
BstV1I GCAGC 2 cut(s) 1213, 1216
BstV2I GAAGAC 4 cut(s) 153, 1215, 1278, 2178
BstX2I RGATCY 6 cut(s) 4, 106, 584, 779, 848, 967
BstYI RGATCY 6 cut(s) 4, 106, 584, 779, 848, 967
BsuRI GGCC 3 cut(s) 820, 2045, 2351
BtsCI GGATG 6 cut(s) 70, 367, 736, 769, 1159, 1369
BtsIMutI CAGTG 4 cut(s) 39, 249, 1026, 2222
BveI ACCTGC 1 cut(s) 1717
Cac8I GCNNGC 3 cut(s) 1416, 1534, 2043
CaiI CAGNNNCTG 1 cut(s) 479
CciI TCATGA 1 cut(s) 619
CfoI GCGC 1 cut(s) 1776
Cfr10I RCCGGY 1 cut(s) 258
Cfr13I GGNCC 5 cut(s) 310, 818, 1189, 1606, 2070
Csp6I GTAC 5 cut(s) 160, 271, 476, 870, 2076
CviAII CATG 9 cut(s) 82, 578, 620, 718, 1186, 1397, 1843, 1934, 2209
CviQI GTAC 5 cut(s) 160, 271, 476, 870, 2076
DdeI CTNAG 7 cut(s) 688, 974, 1073, 1113, 1406, 1988, 2327
DraI TTTAAA 2 cut(s) 91, 1980
DriI GACNNNNNGTC 3 cut(s) 553, 1279, 2298
EaeI YGGCCR 2 cut(s) 2043, 2349
Eam1104I CTCTTC 5 cut(s) 393, 423, 795, 1751, 2283
Eam1105I GACNNNNNGTC 3 cut(s) 553, 1279, 2298
EarI CTCTTC 5 cut(s) 393, 423, 795, 1751, 2283
Ecl136II GAGCTC 2 cut(s) 951, 1303
Eco105I TACGTA 1 cut(s) 270
Eco130I CCWWGG 2 cut(s) 1149, 1192
Eco24I GRGCYC 3 cut(s) 953, 1305, 2313
Eco31I GGTCTC 1 cut(s) 365
Eco47I GGWCC 4 cut(s) 310, 1189, 1606, 2070
Eco53kI GAGCTC 2 cut(s) 951, 1303
Eco57I CTGAAG 5 cut(s) 779, 1227, 1775, 2134, 2190
Eco88I CYCGRG 2 cut(s) 1298, 2258
EcoICRI GAGCTC 2 cut(s) 951, 1303
EcoNI CCTNNNNNAGG 1 cut(s) 379
EcoO109I RGGNCCY 2 cut(s) 1606, 2070
EcoRI GAATTC 1 cut(s) 721
EcoRII CCWGG 4 cut(s) 759, 859, 1337, 2095
EcoT14I CCWWGG 2 cut(s) 1149, 1192
EcoT22I ATGCAT 1 cut(s) 1897
EcoT38I GRGCYC 3 cut(s) 953, 1305, 2313
ErhI CCWWGG 2 cut(s) 1149, 1192
FaeI CATG 9 cut(s) 85, 581, 623, 721, 1189, 1400, 1846, 1937, 2212
FalI AAGNNNNNCTT 6 cut(s) 359, 391, 671, 703, 2111, 2143
FatI CATG 9 cut(s) 81, 577, 619, 717, 1185, 1396, 1842, 1933, 2208
FbaI TGATCA 1 cut(s) 1332
FblI GTMKAC 1 cut(s) 1470
Fnu4HI GCNGC 2 cut(s) 1227, 1230
FokI GGATG 6 cut(s) 77, 374, 743, 776, 1166, 1376
FriOI GRGCYC 3 cut(s) 953, 1305, 2313
Fsp4HI GCNGC 2 cut(s) 1227, 1230
FspBI CTAG 9 cut(s) 122, 194, 884, 954, 1265, 1311, 1436, 1610, 2054
GlaI GCGC 1 cut(s) 1775
GluI GCNGC 2 cut(s) 1227, 1230
GsaI CCCAGC 1 cut(s) 1396
HaeIII GGCC 3 cut(s) 820, 2045, 2351
HapII CCGG 4 cut(s) 15, 259, 588, 1026
HhaI GCGC 1 cut(s) 1776
Hin1II CATG 9 cut(s) 85, 581, 623, 721, 1189, 1400, 1846, 1937, 2212
Hin6I GCGC 1 cut(s) 1774
HinP1I GCGC 1 cut(s) 1774
HincII GTYRAC 2 cut(s) 333, 1503
HindII GTYRAC 2 cut(s) 333, 1503
HindIII AAGCTT 4 cut(s) 296, 462, 536, 1860
HinfI GANTC 8 cut(s) 125, 887, 905, 913, 1218, 1761, 1783, 1819
HpaI GTTAAC 1 cut(s) 333
HpaII CCGG 4 cut(s) 15, 259, 588, 1026
HphI GGTGA 5 cut(s) 850, 1297, 1327, 1987, 2192
Hpy166II GTNNAC 4 cut(s) 39, 333, 1471, 1503
Hpy8I GTNNAC 4 cut(s) 39, 333, 1471, 1503
HpyAV CCTTC 7 cut(s) 64, 361, 1139, 1336, 1669, 1797, 2323
HpyCH4III ACNGT 8 cut(s) 43, 253, 330, 499, 1021, 1700, 2217, 2324
HpyCH4IV ACGT 4 cut(s) 32, 269, 345, 1374
HpyCH4V TGCA 6 cut(s) 418, 473, 734, 1430, 1895, 2230
HpyF10VI GCNNNNNNNGC 5 cut(s) 20, 470, 1402, 1411, 2236
HpyF3I CTNAG 7 cut(s) 688, 974, 1073, 1113, 1406, 1988, 2327
HpySE526I ACGT 4 cut(s) 32, 269, 345, 1374
Hsp92II CATG 9 cut(s) 85, 581, 623, 721, 1189, 1400, 1846, 1937, 2212
HspAI GCGC 1 cut(s) 1774
Ksp22I TGATCA 1 cut(s) 1332
KspAI GTTAAC 1 cut(s) 333
LmnI GCTCC 4 cut(s) 251, 948, 2308, 2382
Lsp1109I GCAGC 2 cut(s) 1213, 1216
LweI GCATC 6 cut(s) 721, 941, 1135, 1153, 1882, 2001
MaeI CTAG 9 cut(s) 122, 194, 884, 954, 1265, 1311, 1436, 1610, 2054
MaeII ACGT 4 cut(s) 32, 269, 345, 1374
MaeIII GTNAC 8 cut(s) 493, 838, 995, 1021, 1387, 1687, 1847, 2282
MfeI CAATTG 1 cut(s) 1870
MflI RGATCY 6 cut(s) 4, 106, 584, 779, 848, 967
MhlI GDGCHC 5 cut(s) 248, 953, 1305, 2222, 2313
MlsI TGGCCA 2 cut(s) 2045, 2351
MluNI TGGCCA 2 cut(s) 2045, 2351
MlyI GAGTC 2 cut(s) 907, 1828
MmeI TCCRAC 1 cut(s) 481
Mox20I TGGCCA 2 cut(s) 2045, 2351
Mph1103I ATGCAT 1 cut(s) 1897
MroXI GAANNNNTTC 2 cut(s) 969, 1275
MscI TGGCCA 2 cut(s) 2045, 2351
MseI TTAA 8 cut(s) 60, 90, 332, 543, 633, 1979, 2066, 2195
MslI CAYNNNNRTG 3 cut(s) 1019, 1241, 2345
Msp20I TGGCCA 2 cut(s) 2045, 2351
MspA1I CMGCKG 1 cut(s) 139
MspCI CTTAAG 1 cut(s) 542
MspI CCGG 4 cut(s) 15, 259, 588, 1026
MspR9I CCNGG 6 cut(s) 16, 589, 761, 861, 1339, 2097
MunI CAATTG 1 cut(s) 1870
Mva1269I GAATGC 2 cut(s) 1584, 1895
MvaI CCWGG 4 cut(s) 761, 861, 1339, 2097
MvnI CGCG 1 cut(s) 1041
MwoI GCNNNNNNNGC 5 cut(s) 20, 470, 1402, 1411, 2236
NciI CCSGG 2 cut(s) 16, 589
NlaIII CATG 9 cut(s) 85, 581, 623, 721, 1189, 1400, 1846, 1937, 2212
NlaIV GGNNCC 4 cut(s) 586, 781, 2310, 2378
NmuCI GTSAC 4 cut(s) 838, 1021, 1687, 2282
NsiI ATGCAT 1 cut(s) 1897
PaeR7I CTCGAG 2 cut(s) 1298, 2258
PagI TCATGA 1 cut(s) 619
PcsI WCGNNNNNNNCGW 1 cut(s) 507
PctI GAATGC 2 cut(s) 1584, 1895
PdmI GAANNNNTTC 2 cut(s) 969, 1275
PfeI GAWTC 6 cut(s) 125, 887, 905, 1218, 1761, 1783
PflMI CCANNNNNTGG 2 cut(s) 866, 1939
PfoI TCCNGGA 3 cut(s) 587, 759, 859
PkrI GCNGC 2 cut(s) 1228, 1231
PleI GAGTC 2 cut(s) 907, 1827
PpsI GAGTC 2 cut(s) 907, 1827
Ppu21I YACGTR 1 cut(s) 270
PpuMI RGGWCCY 2 cut(s) 1606, 2070
PshAI GACNNNNGTC 1 cut(s) 315
Psp124BI GAGCTC 2 cut(s) 953, 1305
Psp1406I AACGTT 2 cut(s) 32, 345
Psp5II RGGWCCY 2 cut(s) 1606, 2070
Psp6I CCWGG 4 cut(s) 759, 859, 1337, 2095
PspFI CCCAGC 1 cut(s) 1392
PspGI CCWGG 4 cut(s) 759, 859, 1337, 2095
PspN4I GGNNCC 4 cut(s) 586, 781, 2310, 2378
PspPI GGNCC 5 cut(s) 310, 818, 1189, 1606, 2070
PspPPI RGGWCCY 2 cut(s) 1606, 2070
PspXI VCTCGAGB 1 cut(s) 1298
PstNI CAGNNNCTG 1 cut(s) 479
PsuI RGATCY 6 cut(s) 4, 106, 584, 779, 848, 967
RsaI GTAC 5 cut(s) 161, 272, 477, 871, 2077
RsaNI GTAC 5 cut(s) 160, 271, 476, 870, 2076
RseI CAYNNNNRTG 3 cut(s) 1019, 1241, 2345
SacI GAGCTC 2 cut(s) 953, 1305
SaqAI TTAA 8 cut(s) 60, 90, 332, 543, 633, 1979, 2066, 2195
SatI GCNGC 2 cut(s) 1227, 1230
Sau96I GGNCC 5 cut(s) 310, 818, 1189, 1606, 2070
SchI GAGTC 2 cut(s) 907, 1828
ScrFI CCNGG 6 cut(s) 16, 589, 761, 861, 1339, 2097
SduI GDGCHC 5 cut(s) 248, 953, 1305, 2222, 2313
SfaNI GCATC 6 cut(s) 721, 941, 1135, 1153, 1882, 2001
SfcI CTRYAG 2 cut(s) 24, 1050
Sfr274I CTCGAG 2 cut(s) 1298, 2258
SinI GGWCC 4 cut(s) 310, 1189, 1606, 2070
SlaI CTCGAG 2 cut(s) 1298, 2258
SmiMI CAYNNNNRTG 3 cut(s) 1019, 1241, 2345
SmlI CTYRAG 4 cut(s) 542, 1298, 2221, 2258
SmoI CTYRAG 4 cut(s) 542, 1298, 2221, 2258
SnaBI TACGTA 1 cut(s) 270
SpeI ACTAGT 1 cut(s) 2053
SsiI CCGC 2 cut(s) 137, 1041
SspI AATATT 2 cut(s) 1621, 1921
SspMI CTAG 9 cut(s) 122, 194, 884, 954, 1265, 1311, 1436, 1610, 2054
SstI GAGCTC 2 cut(s) 953, 1305
StyD4I CCNGG 6 cut(s) 14, 587, 759, 859, 1337, 2095
StyI CCWWGG 2 cut(s) 1149, 1192
TaaI ACNGT 8 cut(s) 43, 253, 330, 499, 1021, 1700, 2217, 2324
TaiI ACGT 4 cut(s) 35, 272, 348, 1377
TaqI TCGA 5 cut(s) 144, 1299, 1781, 2102, 2259
TaqII GACCGA 1 cut(s) 1844
TatI WGTACW 2 cut(s) 159, 2075
TfiI GAWTC 6 cut(s) 125, 887, 905, 1218, 1761, 1783
Tru1I TTAA 8 cut(s) 60, 90, 332, 543, 633, 1979, 2066, 2195
Tru9I TTAA 8 cut(s) 60, 90, 332, 543, 633, 1979, 2066, 2195
TscAI CASTG 4 cut(s) 46, 256, 1026, 2222
TseFI GTSAC 4 cut(s) 838, 1021, 1687, 2282
TseI GCWGC 2 cut(s) 1226, 1229
Tsp45I GTSAC 4 cut(s) 838, 1021, 1687, 2282
TspGWI ACGGA 3 cut(s) 864, 1014, 2044
TspRI CASTG 4 cut(s) 46, 256, 1026, 2222
Van91I CCANNNNNTGG 2 cut(s) 866, 1939
Vha464I CTTAAG 1 cut(s) 542
VpaK11BI GGWCC 4 cut(s) 310, 1189, 1606, 2070
XagI CCTNNNNNAGG 1 cut(s) 379
XapI RAATTY 7 cut(s) 199, 641, 721, 800, 1830, 1884, 1903
XbaI TCTAGA 1 cut(s) 883
XcmI CCANNNNNNNNNTGG 1 cut(s) 1315
XhoI CTCGAG 2 cut(s) 1298, 2258
XmiI GTMKAC 1 cut(s) 1470
XmnI GAANNNNTTC 2 cut(s) 969, 1275
XspI CTAG 9 cut(s) 122, 194, 884, 954, 1265, 1311, 1436, 1610, 2054
Zsp2I ATGCAT 1 cut(s) 1897
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.