FvH4_1g15130

disease resistance

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Forward (+)
8568597 .. 8572003
3407 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g15130.t1

Sequence Viewer

Length: 2652 bp
ATGGTTGGTGCGGATGATGTTTTTGGTGGGGCTGGTGGAGGAATACTGTTCACTGTTCTCTATGATCTGCTGAAAGAGCTCATCAGCAAGTCTATGATATATGGCCCTCTTCTCAAAGATATTCTGTCTGCCTTGGACTCATATAGACCACTGATCAAGCAAATAGAAGCAAGCAATGAGGAACTGGGTTATCGAAAGGAGGAAGTAGAAAAGTTCAAAGCACATATGAAGGAGGGGATAAAGATTGTTAAAAAGTGCTCCAAGGTTCGTAAGTGGAACATCTACAAGAAGTACAAGTACGCCAACAAGCTTCTTGGATGGGATAGTGCTCTTGAAAGACTGTTGAAGGTACTGCAGGCGCAGGGAGTAAGGGATGGGAAGGAGACCTTGCTTTCGGTAAAGAGGATAGAGAGGACGGTCACTGAGATTGAAATGAATAGTAGCATTTTAGAGTCAGGGGTTGAGATTTTAGCAACAACCAGTAGGCATATGGAGAAGGCGCTCAGTGGAGTTGAAATGAGAAGTGGAGATGTATTGGAGGGGATGTACCGGATTGAAGACCGAGTTGAAACAAAGTCTTGCAGTATGGAGGCAGGGATCAAGAGGATTGAAGACCGACTTGATACACAAAATGGAGCTAAAGGTGGAGCTTGGGGTGTTGTGCCTGAACTCACACAGTTTACAGTTGGACTGGATGAGCCTTTGAAGGAGTTGAAGATGAAACTTCTTAAGGATGGAGTCTCGATGCTTGTGGTCACTGCTCCCGGAGGATGTGGGAAAACTACATTGGCAACAAAGTTTTGTCAAGACGGGCAAGTCAAAGATAAATTCAAGAACAACATCTTCTTTGTCACTGTGTCAAACACACCAAACCTAGGCCTTATTGTGCAAGAGTTACACAATCGCAAGGGTTCCCAGGTGCCTACTTTCCAAGACGAAGTAACTGCAGTCAAGTGGCTGCAAACATTTCTGAAGGAACAAGGAAGAAACCCTTTACTATTAGTCTTGGATGATGTTTGGTCTGGATCAGAATCCCTACTAGACAAGTTTCAGTTCGAGATGCAAGATTACAAGATGCCAGATTATAAGATTTTGGTCACATCAAGATCTGAATTTCCGAGATTTGGTTCTTCATATCATTTGCAATCATTGGATTATGACAATGCCATGAAACTCTTTTGTCATTCAGCATCTTTGGGAGATAAAAGCGCGCATATTCCAGCATCCCTCTCGAGACGGATAGTAAAGGGCTGTAAGGGATATCCACTTGCGATCACGGTGGCAGGAGGATCACTTTGCGGACAAAGTATAGAGATCTGGAAACAAAGACTAATTGAATGGTCCAAAGGGTCTTCAATTCTTGATTCTGAGACCAAATTGCTTCTTCGCCTCCAAAGCAGCATAGTTGCCTCAGATAAAGAAATGGCTATCATCAGGGAGTGTTTTCTAGACCTTGGTTCATTTCCTGAAGACCAAAGAATCCCAGTTACTGCCCTCATTGATATATGGACAGAGTTATATGAGCAGCTAGATGAAGATACTCTGTGTGTTGCATACCTTCAGAGGCTCACCAACCGAAGTCTGGCTAATCTTGTAGTCACACGGAAGGACCAGACGCAGGGGGATGGATACTACAGTGAACATTTTGTTACTCAGCATGATCTTCTTCGAGAGTTGGCTATCTATGAGACAAGACAACAAGCCCCAAGAGATAGAGAAAGACTGATTATAAACATAGTTGATGACAATCTTCCTAAATGGTGGATGGAAAAGAAGTATGAATCCATGAAAGCTCGCCTATTATCCATCTCAACTGATGTAAATTTCTCATCAAAATGGCACCACATGGAACTACCAGAAGCTGAAGTTCTAGTCTTGAATTTTCATACGAAGAATTATGCCTTACCCAAATTTATGGACACTATGCATAAATTGAAGGTACTTGTTGTCACAAATTATGGTTTCTCGCCTGCTGAGCTAAGTAATATCGCACTACTGGGTTCATTATCTCACCTAAAGAGAATTAGATTGGAGCGTGTCTCAATACCTTCAATAACCAAGAACCCCATACAGTTGGTGTGTCTGAAGAAGATATCTCTATTCATGTGTACCATCGGAAAAGCTTTCAGCGACGGTTCCATCCAGATTTCATGCGCATTTCCAAATCTGGAGGAAATTAGCATTGACTATTGTAATGATTTGGTGGAAATGCCTGCCGACCTCTGTGATCTAATTCATCTAAGGAAGCTCAGTGTCACCAACTCACATAAGCTTCTTTCCTTACCTGAAGAGATTGGAAAACTGCAAAATTTGGAACTGCTGAGACTAAGGTCATGTACAGACTTGGAACAGTTTCCAGGCTCAAGCAGGAACCTAAAGAAGTTGATCTTTCTGGACATTTCTTATTGCTTTAGCATCAAGGAGTTGCCTGAAGATATTGGTGAAATGAGCAGCTTAAGACAGCTCAACATGAGAGAATGCTCCAGATTGCAAGAAGTGCCTGTATCAGTGTTAGATCTTGAGCATTTGGAGGAAGTGATATGTGATGATGAGACAAAAAATTTATGGGAAGCCTTACCTCTCAAAAACACAATAATAGTGGTGGAAAAAGAAAATATCAACCTAAATTGGCTCCATAAGCTTCACTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

884

Amino Acids

100.37

Weight (kDa)

6.37

Isoelectric Point (pI)

45.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RPW8 PF05659 6 - 138 1.4e-22 Arabidopsis broad-spectrum mildew resistance protein RPW8
NB-ARC PF00931 233 - 397 1.4e-15 NB-ARC domain
LRR_14 PF23598 739 - 844 1.4e-13 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1086, 1730
AasI GACNNNNNNGTC 1 cut(s) 815
Acc16I TGCGCA 1 cut(s) 2155
AccB1I GGYRCC 2 cut(s) 919, 1839
AccII CGCG 1 cut(s) 1211
AciI CCGC 2 cut(s) 11, 1299
AclWI GGATC 3 cut(s) 605, 1033, 1297
AcsI RAATTY 7 cut(s) 827, 1112, 1822, 1879, 1910, 2308, 2560
AcuI CTGAAG 7 cut(s) 992, 1488, 1544, 1884, 2105, 2307, 2451
AfaI GTAC 7 cut(s) 293, 299, 351, 548, 1941, 2110, 2338
AfiI CCNNNNNNNGG 4 cut(s) 875, 1124, 1582, 1618
AflII CTTAAG 2 cut(s) 728, 2455
AjnI CCWGG 2 cut(s) 915, 2356
AjuI GAANNNNNNNTTGG 2 cut(s) 770, 802
Alw21I GWGCWC 3 cut(s) 81, 260, 331
Alw26I GTCTC 8 cut(s) 377, 745, 1228, 1364, 1682, 2044, 2317, 2546
AlwI GGATC 3 cut(s) 605, 1033, 1297
AlwNI CAGNNNCTG 2 cut(s) 1490, 1862
Ama87I CYCGRG 1 cut(s) 1231
AoxI GGCC 2 cut(s) 103, 877
ApeKI GCWGC 4 cut(s) 958, 1398, 1525, 2451
ApoI RAATTY 7 cut(s) 827, 1112, 1822, 1879, 1910, 2308, 2560
ArsI GACNNNNNNTTYG 2 cut(s) 376, 408
Asp700I GAANNNNTTC 1 cut(s) 2352
AspA2I CCTAGG 1 cut(s) 874
AspLEI GCGC 5 cut(s) 361, 502, 1211, 1213, 2156
AspS9I GGNCC 3 cut(s) 104, 1341, 1609
AsuC2I CCSGG 1 cut(s) 765
AsuHPI GGTGA 4 cut(s) 1561, 2003, 2248, 2453
AvaI CYCGRG 1 cut(s) 1231
AvaII GGWCC 2 cut(s) 1341, 1609
AvrII CCTAGG 1 cut(s) 874
BaeI ACNNNNGTAYC 2 cut(s) 1621, 1654
BanI GGYRCC 2 cut(s) 919, 1839
BanII GRGCYC 1 cut(s) 81
BarI GAAGNNNNNNTAC 2 cut(s) 281, 313
BbsI GAAGAC 4 cut(s) 564, 618, 1344, 1476
Bbv12I GWGCWC 3 cut(s) 81, 260, 331
BbvI GCAGC 4 cut(s) 945, 1410, 1537, 2463
BccI CCATC 8 cut(s) 312, 368, 728, 1619, 1759, 1814, 2120, 2147
BcgI CGANNNNNNTGC 4 cut(s) 926, 960, 1212, 1246
BciT130I CCWGG 2 cut(s) 917, 2358
BciVI GTATCC 1 cut(s) 1622
BclI TGATCA 1 cut(s) 153
BcnI CCSGG 1 cut(s) 765
BcoDI GTCTC 8 cut(s) 377, 745, 1228, 1364, 1682, 2044, 2317, 2546
BfaI CTAG 5 cut(s) 875, 1040, 1448, 1529, 1871
BfmI CTRYAG 3 cut(s) 353, 945, 1633
BfoI RGCGCY 1 cut(s) 503
BfrI CTTAAG 2 cut(s) 728, 2455
BfuI GTATCC 1 cut(s) 1622
BglII AGATCT 3 cut(s) 1106, 1314, 2515
BisI GCNGC 4 cut(s) 959, 1399, 1526, 2452
BlnI CCTAGG 1 cut(s) 874
BlpI GCTNAGC 1 cut(s) 1974
BlsI GCNGC 4 cut(s) 960, 1400, 1527, 2453
Bme1390I CCNGG 3 cut(s) 765, 917, 2358
Bme18I GGWCC 2 cut(s) 1341, 1609
BmeT110I CYCGRG 1 cut(s) 1231
BmgT120I GGNCC 3 cut(s) 104, 1341, 1609
BmiI GGNNCC 6 cut(s) 913, 921, 1841, 2137, 2372, 2633
BmrFI CCNGG 3 cut(s) 765, 917, 2358
BmrI ACTGGG 3 cut(s) 194, 1478, 2006
BmsI GCATC 6 cut(s) 735, 1050, 1065, 1199, 1232, 2424
BmuI ACTGGG 3 cut(s) 194, 1478, 2006
BoxI GACNNNNGTC 1 cut(s) 2329
BpiI GAAGAC 4 cut(s) 564, 618, 1344, 1476
BplI GAGNNNNNCTC 2 cut(s) 2024, 2056
BpmI CTGGAG 2 cut(s) 2189, 2467
Bpu1102I GCTNAGC 1 cut(s) 1974
BpuEI CTTGAG 2 cut(s) 2347, 2540
BpuMI CCSGG 1 cut(s) 765
BsaBI GATNNNNATC 2 cut(s) 1030, 1746
BsaI GGTCTC 2 cut(s) 377, 1364
BsaJI CCNNGG 5 cut(s) 132, 261, 874, 915, 1453
BsaWI WCCGGW 1 cut(s) 549
BsaXI ACNNNNNCTCC 2 cut(s) 530, 560
Bsc4I CCNNNNNNNGG 4 cut(s) 875, 1124, 1582, 1618
Bse1I ACTGG 5 cut(s) 189, 480, 696, 1484, 2001
Bse3DI GCAATG 1 cut(s) 181
Bse8I GATNNNNATC 2 cut(s) 1030, 1746
BseBI CCWGG 2 cut(s) 917, 2358
BseDI CCNNGG 5 cut(s) 132, 261, 874, 915, 1453
BseJI GATNNNNATC 2 cut(s) 1030, 1746
BseLI CCNNNNNNNGG 4 cut(s) 875, 1124, 1582, 1618
BseMI GCAATG 1 cut(s) 181
BseMII CTCAG 8 cut(s) 414, 517, 1359, 1425, 1667, 1965, 2263, 2312
BseNI ACTGG 5 cut(s) 189, 480, 696, 1484, 2001
BsePI GCGCGC 1 cut(s) 1209
BseXI GCAGC 4 cut(s) 945, 1410, 1537, 2463
Bsh1236I CGCG 1 cut(s) 1211
BshFI GGCC 2 cut(s) 105, 879
BshNI GGYRCC 2 cut(s) 919, 1839
BsiHKAI GWGCWC 3 cut(s) 81, 260, 331
BsiHKCI CYCGRG 1 cut(s) 1231
BsiSI CCGG 2 cut(s) 550, 765
BslI CCNNNNNNNGG 4 cut(s) 875, 1124, 1582, 1618
BsmAI GTCTC 8 cut(s) 377, 745, 1228, 1364, 1682, 2044, 2317, 2546
BsmBI CGTCTC 1 cut(s) 1228
BsmI GAATGC 1 cut(s) 2483
BsnI GGCC 2 cut(s) 105, 879
Bso31I GGTCTC 2 cut(s) 377, 1364
BsoBI CYCGRG 1 cut(s) 1231
Bsp1286I GDGCHC 3 cut(s) 81, 260, 331
Bsp1407I TGTACA 1 cut(s) 2336
Bsp1720I GCTNAGC 1 cut(s) 1974
BspACI CCGC 2 cut(s) 11, 1299
BspANI GGCC 2 cut(s) 105, 879
BspCNI CTCAG 8 cut(s) 415, 516, 1360, 1424, 1666, 1966, 2262, 2313
BspFNI CGCG 1 cut(s) 1211
BspLI GGNNCC 6 cut(s) 913, 921, 1841, 2137, 2372, 2633
BspMAI CTGCAG 2 cut(s) 357, 949
BspPI GGATC 3 cut(s) 605, 1033, 1297
BspT107I GGYRCC 2 cut(s) 919, 1839
BspTI CTTAAG 2 cut(s) 728, 2455
BspTNI GGTCTC 2 cut(s) 377, 1364
BsrDI GCAATG 1 cut(s) 181
BsrGI TGTACA 1 cut(s) 2336
BsrI ACTGG 5 cut(s) 189, 480, 696, 1484, 2001
BssECI CCNNGG 5 cut(s) 132, 261, 874, 915, 1453
BssHII GCGCGC 1 cut(s) 1209
BssT1I CCWWGG 4 cut(s) 132, 261, 874, 1453
Bst2UI CCWGG 2 cut(s) 917, 2358
Bst6I CTCTTC 2 cut(s) 114, 2283
BstAFI CTTAAG 2 cut(s) 728, 2455
BstAPI GCANNNNNTGC 1 cut(s) 2497
BstAUI TGTACA 1 cut(s) 2336
BstC8I GCNNGC 6 cut(s) 172, 357, 1211, 1795, 1971, 2214
BstFNI CGCG 1 cut(s) 1211
BstH2I RGCGCY 1 cut(s) 503
BstHHI GCGC 5 cut(s) 361, 502, 1211, 1213, 2156
BstMAI GTCTC 8 cut(s) 377, 745, 1228, 1364, 1682, 2044, 2317, 2546
BstMWI GCNNNNNNNGC 5 cut(s) 76, 1395, 1975, 2497, 2638
BstNI CCWGG 2 cut(s) 917, 2358
BstPAI GACNNNNGTC 1 cut(s) 2329
BstSCI CCNGG 3 cut(s) 763, 915, 2356
BstSFI CTRYAG 3 cut(s) 353, 945, 1633
BstUI CGCG 1 cut(s) 1211
BstV1I GCAGC 4 cut(s) 945, 1410, 1537, 2463
BstV2I GAAGAC 4 cut(s) 564, 618, 1344, 1476
BstX2I RGATCY 3 cut(s) 1106, 1314, 2515
BstXI CCANNNNNNTGG 2 cut(s) 1915, 2074
BstYI RGATCY 3 cut(s) 1106, 1314, 2515
BsuI GTATCC 1 cut(s) 1622
BsuRI GGCC 2 cut(s) 105, 879
BtsI GCAGTG 1 cut(s) 756
BtsIMutI CAGTG 9 cut(s) 51, 149, 420, 511, 756, 852, 1642, 2257, 2514
Cac8I GCNNGC 6 cut(s) 172, 357, 1211, 1795, 1971, 2214
CaiI CAGNNNCTG 2 cut(s) 1490, 1862
CfoI GCGC 5 cut(s) 361, 502, 1211, 1213, 2156
Cfr13I GGNCC 3 cut(s) 104, 1341, 1609
CseI GACGC 1 cut(s) 1624
Csp6I GTAC 7 cut(s) 292, 298, 350, 547, 1940, 2109, 2337
CspCI CAANNNNNGTGG 2 cut(s) 2580, 2615
CviAII CATG 8 cut(s) 1168, 1658, 1786, 1846, 2104, 2151, 2334, 2470
CviQI GTAC 7 cut(s) 292, 298, 350, 547, 1940, 2109, 2337
DrdI GACNNNNNNGTC 1 cut(s) 815
DseDI GACNNNNNNGTC 1 cut(s) 815
Eam1104I CTCTTC 2 cut(s) 114, 2283
EarI CTCTTC 2 cut(s) 114, 2283
Ecl136II GAGCTC 1 cut(s) 79
Eco130I CCWWGG 4 cut(s) 132, 261, 874, 1453
Eco147I AGGCCT 1 cut(s) 879
Eco24I GRGCYC 1 cut(s) 81
Eco31I GGTCTC 2 cut(s) 377, 1364
Eco32I GATATC 2 cut(s) 1262, 2094
Eco47I GGWCC 2 cut(s) 1341, 1609
Eco53kI GAGCTC 1 cut(s) 79
Eco57I CTGAAG 7 cut(s) 992, 1488, 1544, 1884, 2105, 2307, 2451
Eco88I CYCGRG 1 cut(s) 1231
EcoICRI GAGCTC 1 cut(s) 79
EcoRII CCWGG 2 cut(s) 915, 2356
EcoRV GATATC 2 cut(s) 1262, 2094
EcoT14I CCWWGG 4 cut(s) 132, 261, 874, 1453
EcoT22I ATGCAT 1 cut(s) 1929
EcoT38I GRGCYC 1 cut(s) 81
ErhI CCWWGG 4 cut(s) 132, 261, 874, 1453
Esp3I CGTCTC 1 cut(s) 1228
FaeI CATG 8 cut(s) 1171, 1661, 1789, 1849, 2107, 2154, 2337, 2473
FalI AAGNNNNNCTT 9 cut(s) 371, 403, 603, 635, 976, 1008, 2372, 2404, 2630
FatI CATG 8 cut(s) 1167, 1657, 1785, 1845, 2103, 2150, 2333, 2469
FauNDI CATATG 2 cut(s) 225, 489
FbaI TGATCA 1 cut(s) 153
Fnu4HI GCNGC 4 cut(s) 959, 1399, 1526, 2452
FriOI GRGCYC 1 cut(s) 81
Fsp4HI GCNGC 4 cut(s) 959, 1399, 1526, 2452
FspAI RTGCGCAY 1 cut(s) 2155
FspBI CTAG 5 cut(s) 875, 1040, 1448, 1529, 1871
FspI TGCGCA 1 cut(s) 2155
GlaI GCGC 5 cut(s) 360, 501, 1210, 1212, 2155
GluI GCNGC 4 cut(s) 959, 1399, 1526, 2452
GsuI CTGGAG 2 cut(s) 2189, 2467
HaeII RGCGCY 1 cut(s) 503
HaeIII GGCC 2 cut(s) 105, 879
HapII CCGG 2 cut(s) 550, 765
HgaI GACGC 1 cut(s) 1624
HhaI GCGC 5 cut(s) 361, 502, 1211, 1213, 2156
Hin1II CATG 8 cut(s) 1171, 1661, 1789, 1849, 2107, 2154, 2337, 2473
Hin6I GCGC 5 cut(s) 359, 500, 1209, 1211, 2154
HinP1I GCGC 5 cut(s) 359, 500, 1209, 1211, 2154
HindIII AAGCTT 4 cut(s) 308, 2121, 2270, 2639
HinfI GANTC 7 cut(s) 137, 452, 738, 1031, 1364, 1479, 1781
HpaII CCGG 2 cut(s) 550, 765
HphI GGTGA 4 cut(s) 1561, 2003, 2248, 2453
Hpy166II GTNNAC 4 cut(s) 51, 681, 1640, 2109
Hpy188I TCNGA 9 cut(s) 972, 1030, 1111, 1119, 1369, 1414, 1563, 2085, 2117
Hpy8I GTNNAC 4 cut(s) 51, 681, 1640, 2109
Hpy99I CGWCG 1 cut(s) 2135
HpyF10VI GCNNNNNNNGC 5 cut(s) 76, 1395, 1975, 2497, 2638
Hsp92II CATG 8 cut(s) 1171, 1661, 1789, 1849, 2107, 2154, 2337, 2473
HspAI GCGC 5 cut(s) 359, 500, 1209, 1211, 2154
Ksp22I TGATCA 1 cut(s) 153
LmnI GCTCC 7 cut(s) 263, 635, 647, 766, 2032, 2486, 2637
Lsp1109I GCAGC 4 cut(s) 945, 1410, 1537, 2463
LweI GCATC 6 cut(s) 735, 1050, 1065, 1199, 1232, 2424
MaeI CTAG 5 cut(s) 875, 1040, 1448, 1529, 1871
MflI RGATCY 3 cut(s) 1106, 1314, 2515
MhlI GDGCHC 3 cut(s) 81, 260, 331
MlyI GAGTC 3 cut(s) 131, 461, 747
MmeI TCCRAC 1 cut(s) 667
Mph1103I ATGCAT 1 cut(s) 1929
MroXI GAANNNNTTC 1 cut(s) 2352
MseI TTAA 3 cut(s) 249, 729, 2456
MslI CAYNNNNRTG 1 cut(s) 1834
MspCI CTTAAG 2 cut(s) 728, 2455
MspI CCGG 2 cut(s) 550, 765
MspR9I CCNGG 3 cut(s) 765, 917, 2358
Mva1269I GAATGC 1 cut(s) 2483
MvaI CCWGG 2 cut(s) 917, 2358
MvnI CGCG 1 cut(s) 1211
MwoI GCNNNNNNNGC 5 cut(s) 76, 1395, 1975, 2497, 2638
NciI CCSGG 1 cut(s) 765
NdeI CATATG 2 cut(s) 225, 489
NlaIII CATG 8 cut(s) 1171, 1661, 1789, 1849, 2107, 2154, 2337, 2473
NlaIV GGNNCC 6 cut(s) 913, 921, 1841, 2137, 2372, 2633
NmuCI GTSAC 7 cut(s) 418, 754, 850, 1096, 1597, 1948, 2254
NsbI TGCGCA 1 cut(s) 2155
NsiI ATGCAT 1 cut(s) 1929
PaeR7I CTCGAG 1 cut(s) 1231
PauI GCGCGC 1 cut(s) 1209
PceI AGGCCT 1 cut(s) 879
PctI GAATGC 1 cut(s) 2483
PdmI GAANNNNTTC 1 cut(s) 2352
PfeI GAWTC 4 cut(s) 1031, 1364, 1479, 1781
PfoI TCCNGGA 1 cut(s) 763
PkrI GCNGC 4 cut(s) 960, 1400, 1527, 2453
PleI GAGTC 3 cut(s) 131, 460, 746
PpsI GAGTC 3 cut(s) 131, 460, 746
PshAI GACNNNNGTC 1 cut(s) 2329
PsiI TTATAA 2 cut(s) 1086, 1730
Psp124BI GAGCTC 1 cut(s) 81
Psp6I CCWGG 2 cut(s) 915, 2356
PspGI CCWGG 2 cut(s) 915, 2356
PspN4I GGNNCC 6 cut(s) 913, 921, 1841, 2137, 2372, 2633
PspPI GGNCC 3 cut(s) 104, 1341, 1609
PstI CTGCAG 2 cut(s) 357, 949
PstNI CAGNNNCTG 2 cut(s) 1490, 1862
PsuI RGATCY 3 cut(s) 1106, 1314, 2515
PteI GCGCGC 1 cut(s) 1209
RsaI GTAC 7 cut(s) 293, 299, 351, 548, 1941, 2110, 2338
RsaNI GTAC 7 cut(s) 292, 298, 350, 547, 1940, 2109, 2337
RseI CAYNNNNRTG 1 cut(s) 1834
SacI GAGCTC 1 cut(s) 81
SaqAI TTAA 3 cut(s) 249, 729, 2456
SatI GCNGC 4 cut(s) 959, 1399, 1526, 2452
Sau96I GGNCC 3 cut(s) 104, 1341, 1609
SchI GAGTC 3 cut(s) 131, 461, 747
ScrFI CCNGG 3 cut(s) 765, 917, 2358
SduI GDGCHC 3 cut(s) 81, 260, 331
SfaNI GCATC 6 cut(s) 735, 1050, 1065, 1199, 1232, 2424
SfcI CTRYAG 3 cut(s) 353, 945, 1633
Sfr274I CTCGAG 1 cut(s) 1231
SinI GGWCC 2 cut(s) 1341, 1609
SlaI CTCGAG 1 cut(s) 1231
SmiMI CAYNNNNRTG 1 cut(s) 1834
SmlI CTYRAG 5 cut(s) 728, 1231, 2362, 2455, 2519
SmoI CTYRAG 5 cut(s) 728, 1231, 2362, 2455, 2519
SseBI AGGCCT 1 cut(s) 879
SsiI CCGC 2 cut(s) 11, 1299
SspMI CTAG 5 cut(s) 875, 1040, 1448, 1529, 1871
SstI GAGCTC 1 cut(s) 81
StuI AGGCCT 1 cut(s) 879
StyD4I CCNGG 3 cut(s) 763, 915, 2356
StyI CCWWGG 4 cut(s) 132, 261, 874, 1453
TaqI TCGA 5 cut(s) 193, 743, 1056, 1232, 1669
TaqII GACCGA 2 cut(s) 576, 630
TatI WGTACW 2 cut(s) 291, 2336
TfiI GAWTC 4 cut(s) 1031, 1364, 1479, 1781
Tru1I TTAA 3 cut(s) 249, 729, 2456
Tru9I TTAA 3 cut(s) 249, 729, 2456
TscAI CASTG 9 cut(s) 58, 156, 427, 511, 763, 859, 1642, 2257, 2514
TseFI GTSAC 7 cut(s) 418, 754, 850, 1096, 1597, 1948, 2254
TseI GCWGC 4 cut(s) 958, 1398, 1525, 2451
Tsp45I GTSAC 7 cut(s) 418, 754, 850, 1096, 1597, 1948, 2254
TspGWI ACGGA 2 cut(s) 1252, 1618
TspRI CASTG 9 cut(s) 58, 156, 427, 511, 763, 859, 1642, 2257, 2514
Vha464I CTTAAG 2 cut(s) 728, 2455
VpaK11BI GGWCC 2 cut(s) 1341, 1609
XapI RAATTY 7 cut(s) 827, 1112, 1822, 1879, 1910, 2308, 2560
XbaI TCTAGA 1 cut(s) 1447
XcmI CCANNNNNNNNNTGG 2 cut(s) 487, 1579
XhoI CTCGAG 1 cut(s) 1231
XmaJI CCTAGG 1 cut(s) 874
XmnI GAANNNNTTC 1 cut(s) 2352
XspI CTAG 5 cut(s) 875, 1040, 1448, 1529, 1871
Zsp2I ATGCAT 1 cut(s) 1929
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.