RchiOBHm_Chr2g0158291

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Forward (+)
74629730 .. 74638594
8865 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ52698

Sequence Viewer

Length: 1485 bp
ATGTCCAAATTTTTTCAGATAGTTGAGCGTTGTAAGGGATTTCCACTTGCCATTACAGTGGTGGGCAGATCGCTTCGTGCACAACCTCTAGAGATGTGGCAAAACAGACTAAGTCAATGGGCTAAAGGTTCATCTCTTTTTGATTCTGAGACTGATTTACTTCTTTCCCTCCAAAGCAGCTTGGATGCTTTGGATAAGGAAAGGGCTATCATCAGAGAATGTTTCTTGGACCTTGGTTCATTTCCTGAAGACAGAGAAATCCCCGTTGATGCCCTCATTGATATATGGTCCGAGTTATATGATATTGATGAAGACACTTCGTGTATTGCAAACCTCTATGAACTCAACAATCGGAGTCTTGCTAATCTTATAGACAGAAGGGCATCGAGCTTGGATGGGGAAGGATATTATGGTTACCACTATGTCACCCAACATGATGTGCTTAGGGAGCTCGCTATTTATCACTCGAAACTAGATCCGGTAGAGCATAGAGAAAGATTGATCATAGACACATGTGGAAGCAATCTTCCCAAGTGGTGGAGGGAACAAAAGTATCAAGTTATGAAAGCTCGTCTTCTATCTCTATCAGCTGTTCTCCCCACACTTGCATCATATAGCATTTTGTATGTAGAGTCTTCAACTTTGAAATGCCTCAACATGCATCTGCCAGAAACAGAGGTACTGATCTTGAATATGCGGTACTTGAATGTGCGGGACATGTTGTATATACCCGAATTTGTGGAGAAAATGGACAAATTGAAGGTACTAGTAATCACAGGTGAGGAGGCCCGGGTTCCAGTTGTCTTGCATAATTTTCAAGTACTAAGTCGGTTATCCAATCTAAAGAGAATCAGATTAAGGGGCATCTCAATTTCATCCATAGTCAAGAACTCCATACAAGTGAAGAGTCTACGCAAGTTGTCTTTGATCAGATGTAGTACCGGAATCGGTTCGGCCAAACTTGCCCATGCTTTTCCAAATCTAGAAGAGATACACATCAAACACGGTTCATTATTATTTCACTTGCCAAGTGATACTAGGACAGTACTTCGAGGGCTATGTGATCTGATTTCCCTAAAGAAGGTCACCCTCACAGAAGTTCGAGTATTTCAAGTATGGGCTTTGCCTGACGAGATTGGAAATTTGGTCAATTTACAAGTATTGAGGCTGAGGTCATGTCCTGATCTTTCAGAGCTTCCAAACTCGATCAAAAACCTCAAGAAGTTGAACTTTCTTGGCATCTTTAATTGCGAAGAATTCCGCGAGTTACCTGAATGCATTGGTCAAATGAGGAGTTTAAGAAAGATCGACACGAGAGGTTGCAGGAGATTGACGACTCTGCCTCGATCAGTATTGGATTTGAAGCAGTTAGAGGAGGTGACATGTGATGAAGATACAGAAAGCTTATGGAAATCCCTGTTGCCCAGTTTCAGAGACAGAAACCAAGACATACGCATAGTGATTGGGCCGCCACCATTGCGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

494

Amino Acids

56.8

Weight (kDa)

8.18

Isoelectric Point (pI)

44.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 347 - 477 1.2e-14 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 537
AccI GTMKAC 1 cut(s) 910
AccII CGCG 1 cut(s) 1263
AciI CCGC 4 cut(s) 697, 712, 1261, 1469
AclWI GGATC 1 cut(s) 470
AcoI YGGCCR 1 cut(s) 954
AcsI RAATTY 4 cut(s) 8, 734, 1141, 1256
AcuI CTGAAG 1 cut(s) 267
AdeI CACNNNGTG 1 cut(s) 321
AfaI GTAC 6 cut(s) 681, 701, 765, 822, 940, 1047
AfiI CCNNNNNNNGG 2 cut(s) 537, 1081
AflIII ACRYGT 3 cut(s) 512, 717, 1382
AgsI TTSAA 9 cut(s) 639, 646, 691, 706, 760, 818, 1112, 1228, 1363
AhlI ACTAGT 1 cut(s) 766
AluBI AGCT 7 cut(s) 180, 390, 451, 569, 590, 1195, 1404
AluI AGCT 7 cut(s) 180, 390, 451, 569, 590, 1195, 1404
Alw21I GWGCWC 2 cut(s) 82, 453
Alw26I GTCTC 2 cut(s) 143, 1428
Alw44I GTGCAC 1 cut(s) 78
AlwI GGATC 1 cut(s) 470
Ama87I CYCGRG 1 cut(s) 789
AoxI GGCC 3 cut(s) 786, 954, 1466
ApaLI GTGCAC 1 cut(s) 78
ApeKI GCWGC 1 cut(s) 177
ApoI RAATTY 4 cut(s) 8, 734, 1141, 1256
Asp700I GAANNNNTTC 1 cut(s) 949
AspS9I GGNCC 4 cut(s) 229, 288, 787, 1466
AsuC2I CCSGG 2 cut(s) 790, 791
AsuHPI GGTGA 4 cut(s) 418, 791, 1078, 1390
AvaI CYCGRG 1 cut(s) 789
AvaII GGWCC 2 cut(s) 229, 288
BaeGI GKGCMC 1 cut(s) 82
BaeI ACNNNNGTAYC 2 cut(s) 536, 569
BanII GRGCYC 1 cut(s) 453
BauI CACGAG 1 cut(s) 1312
BbsI GAAGAC 4 cut(s) 255, 318, 566, 627
Bbv12I GWGCWC 2 cut(s) 82, 453
BbvCI CCTCAGC 1 cut(s) 1169
BbvI GCAGC 1 cut(s) 189
BccI CCATC 1 cut(s) 389
BclI TGATCA 2 cut(s) 501, 927
BcnI CCSGG 2 cut(s) 790, 791
BcoDI GTCTC 2 cut(s) 143, 1428
BcuI ACTAGT 1 cut(s) 766
BfaI CTAG 5 cut(s) 89, 473, 767, 983, 1038
BisI GCNGC 2 cut(s) 178, 1469
BlsI GCNGC 2 cut(s) 179, 1470
BmcAI AGTACT 2 cut(s) 822, 1047
Bme1390I CCNGG 2 cut(s) 790, 791
Bme18I GGWCC 2 cut(s) 229, 288
BmeT110I CYCGRG 1 cut(s) 789
BmgT120I GGNCC 4 cut(s) 229, 288, 787, 1466
BmiI GGNNCC 1 cut(s) 795
BmrFI CCNGG 2 cut(s) 790, 791
BmrI ACTGGG 1 cut(s) 1419
BmsI GCATC 7 cut(s) 175, 259, 392, 617, 670, 873, 1248
BmuI ACTGGG 1 cut(s) 1419
BpiI GAAGAC 4 cut(s) 255, 318, 566, 627
Bpu10I CCTNAGC 2 cut(s) 443, 1169
BpuEI CTTGAG 1 cut(s) 1202
BpuMI CCSGG 2 cut(s) 790, 791
BsaBI GATNNNNATC 1 cut(s) 995
BsaJI CCNNGG 2 cut(s) 232, 789
BsaWI WCCGGW 2 cut(s) 478, 941
Bsc4I CCNNNNNNNGG 2 cut(s) 537, 1081
Bse1I ACTGG 2 cut(s) 797, 1425
Bse3DI GCAATG 1 cut(s) 1475
Bse8I GATNNNNATC 1 cut(s) 995
BseDI CCNNGG 2 cut(s) 232, 789
BseGI GGATG 3 cut(s) 190, 400, 875
BseJI GATNNNNATC 1 cut(s) 995
BseLI CCNNNNNNNGG 2 cut(s) 537, 1081
BseMI GCAATG 1 cut(s) 1475
BseMII CTCAG 2 cut(s) 138, 1160
BseNI ACTGG 2 cut(s) 797, 1425
BseRI GAGGAG 3 cut(s) 797, 1306, 1388
BseSI GKGCMC 1 cut(s) 82
BseXI GCAGC 1 cut(s) 189
Bsh1236I CGCG 1 cut(s) 1263
BshFI GGCC 3 cut(s) 788, 956, 1468
BsiHKAI GWGCWC 2 cut(s) 82, 453
BsiHKCI CYCGRG 1 cut(s) 789
BsiSI CCGG 3 cut(s) 479, 790, 942
BslFI GGGAC 1 cut(s) 728
BslI CCNNNNNNNGG 2 cut(s) 537, 1081
BsmAI GTCTC 2 cut(s) 143, 1428
BsmFI GGGAC 1 cut(s) 728
BsmI GAATGC 1 cut(s) 1280
BsnI GGCC 3 cut(s) 788, 956, 1468
BsoBI CYCGRG 1 cut(s) 789
Bsp1286I GDGCHC 2 cut(s) 82, 453
BspACI CCGC 4 cut(s) 697, 712, 1261, 1469
BspANI GGCC 3 cut(s) 788, 956, 1468
BspCNI CTCAG 2 cut(s) 139, 1161
BspFNI CGCG 1 cut(s) 1263
BspLI GGNNCC 1 cut(s) 795
BspPI GGATC 1 cut(s) 470
BsrDI GCAATG 1 cut(s) 1475
BsrI ACTGG 2 cut(s) 797, 1425
BssECI CCNNGG 2 cut(s) 232, 789
BssSI CACGAG 1 cut(s) 1312
BssT1I CCWWGG 1 cut(s) 232
Bst2BI CACGAG 1 cut(s) 1312
Bst4CI ACNGT 3 cut(s) 58, 1007, 1045
Bst6I CTCTTC 2 cut(s) 899, 981
BstC8I GCNNGC 1 cut(s) 453
BstDEI CTNAG 5 cut(s) 110, 147, 443, 824, 1169
BstEII GGTNACC 2 cut(s) 413, 1084
BstENI CCTNNNNNAGG 1 cut(s) 1079
BstF5I GGATG 3 cut(s) 190, 400, 875
BstFNI CGCG 1 cut(s) 1263
BstMAI GTCTC 2 cut(s) 143, 1428
BstMWI GCNNNNNNNGC 3 cut(s) 448, 962, 1477
BstNSI RCATGY 4 cut(s) 516, 661, 721, 1386
BstPI GGTNACC 2 cut(s) 413, 1084
BstSCI CCNGG 2 cut(s) 788, 789
BstSLI GKGCMC 1 cut(s) 82
BstUI CGCG 1 cut(s) 1263
BstV1I GCAGC 1 cut(s) 189
BstV2I GAAGAC 4 cut(s) 255, 318, 566, 627
BstX2I RGATCY 1 cut(s) 475
BstXI CCANNNNNNTGG 1 cut(s) 58
BstYI RGATCY 1 cut(s) 475
BsuRI GGCC 3 cut(s) 788, 956, 1468
BtsCI GGATG 3 cut(s) 190, 400, 875
BtsIMutI CAGTG 1 cut(s) 63
Cac8I GCNNGC 1 cut(s) 453
Cfr13I GGNCC 4 cut(s) 229, 288, 787, 1466
Cfr9I CCCGGG 1 cut(s) 789
Csp6I GTAC 6 cut(s) 680, 700, 764, 821, 939, 1046
CviAII CATG 7 cut(s) 434, 513, 658, 718, 968, 1176, 1383
CviQI GTAC 6 cut(s) 680, 700, 764, 821, 939, 1046
DdeI CTNAG 5 cut(s) 110, 147, 443, 824, 1169
DraIII CACNNNGTG 1 cut(s) 321
EaeI YGGCCR 1 cut(s) 954
Eam1104I CTCTTC 2 cut(s) 899, 981
EarI CTCTTC 2 cut(s) 899, 981
Ecl136II GAGCTC 1 cut(s) 451
Eco130I CCWWGG 1 cut(s) 232
Eco24I GRGCYC 1 cut(s) 453
Eco47I GGWCC 2 cut(s) 229, 288
Eco53kI GAGCTC 1 cut(s) 451
Eco57I CTGAAG 1 cut(s) 267
Eco88I CYCGRG 1 cut(s) 789
Eco91I GGTNACC 2 cut(s) 413, 1084
EcoICRI GAGCTC 1 cut(s) 451
EcoNI CCTNNNNNAGG 1 cut(s) 1079
EcoO65I GGTNACC 2 cut(s) 413, 1084
EcoRI GAATTC 1 cut(s) 1256
EcoT14I CCWWGG 1 cut(s) 232
EcoT22I ATGCAT 2 cut(s) 663, 1280
EcoT38I GRGCYC 1 cut(s) 453
ErhI CCWWGG 1 cut(s) 232
FaeI CATG 7 cut(s) 437, 516, 661, 721, 971, 1179, 1386
FalI AAGNNNNNCTT 4 cut(s) 558, 590, 1214, 1246
FaqI GGGAC 1 cut(s) 728
FatI CATG 7 cut(s) 433, 512, 657, 717, 967, 1175, 1382
FauI CCCGC 1 cut(s) 705
FbaI TGATCA 2 cut(s) 501, 927
FblI GTMKAC 1 cut(s) 910
Fnu4HI GCNGC 2 cut(s) 178, 1469
FokI GGATG 3 cut(s) 197, 407, 862
FriOI GRGCYC 1 cut(s) 453
Fsp4HI GCNGC 2 cut(s) 178, 1469
FspBI CTAG 5 cut(s) 89, 473, 767, 983, 1038
GluI GCNGC 2 cut(s) 178, 1469
HaeIII GGCC 3 cut(s) 788, 956, 1468
HapII CCGG 3 cut(s) 479, 790, 942
Hin1II CATG 7 cut(s) 437, 516, 661, 721, 971, 1179, 1386
HindIII AAGCTT 1 cut(s) 1402
HinfI GANTC 7 cut(s) 143, 355, 632, 849, 907, 945, 1336
HpaII CCGG 3 cut(s) 479, 790, 942
HphI GGTGA 4 cut(s) 418, 791, 1078, 1390
Hpy166II GTNNAC 2 cut(s) 80, 911
Hpy188III TCNNGA 7 cut(s) 89, 245, 688, 886, 983, 1181, 1219
Hpy8I GTNNAC 2 cut(s) 80, 911
HpyAV CCTTC 4 cut(s) 372, 395, 754, 1075
HpyCH4III ACNGT 3 cut(s) 58, 1007, 1045
HpyCH4V TGCA 7 cut(s) 80, 329, 608, 661, 808, 1278, 1323
HpyF10VI GCNNNNNNNGC 3 cut(s) 448, 962, 1477
HpyF3I CTNAG 5 cut(s) 110, 147, 443, 824, 1169
Hsp92II CATG 7 cut(s) 437, 516, 661, 721, 971, 1179, 1386
Ksp22I TGATCA 2 cut(s) 501, 927
LmnI GCTCC 1 cut(s) 448
Lsp1109I GCAGC 1 cut(s) 189
LweI GCATC 7 cut(s) 175, 259, 392, 617, 670, 873, 1248
MaeI CTAG 5 cut(s) 89, 473, 767, 983, 1038
MaeIII GTNAC 5 cut(s) 413, 424, 1084, 1266, 1378
MboII GAAGA 9 cut(s) 260, 323, 518, 566, 627, 916, 998, 1265, 1403
MflI RGATCY 1 cut(s) 475
MhlI GDGCHC 2 cut(s) 82, 453
MluCI AATT 9 cut(s) 8, 734, 755, 811, 870, 1141, 1150, 1246, 1256
MlyI GAGTC 4 cut(s) 364, 641, 916, 1330
Mph1103I ATGCAT 2 cut(s) 663, 1280
MroXI GAANNNNTTC 1 cut(s) 949
MseI TTAA 3 cut(s) 857, 1245, 1298
MslI CAYNNNNRTG 2 cut(s) 56, 899
MspA1I CMGCKG 1 cut(s) 590
MspI CCGG 3 cut(s) 479, 790, 942
MspR9I CCNGG 2 cut(s) 790, 791
Mva1269I GAATGC 1 cut(s) 1280
MvnI CGCG 1 cut(s) 1263
MwoI GCNNNNNNNGC 3 cut(s) 448, 962, 1477
NciI CCSGG 2 cut(s) 790, 791
NlaIII CATG 7 cut(s) 437, 516, 661, 721, 971, 1179, 1386
NlaIV GGNNCC 1 cut(s) 795
NmuCI GTSAC 3 cut(s) 424, 1084, 1378
NsiI ATGCAT 2 cut(s) 663, 1280
NspI RCATGY 4 cut(s) 516, 661, 721, 1386
PciI ACATGT 3 cut(s) 512, 717, 1382
PctI GAATGC 1 cut(s) 1280
PdmI GAANNNNTTC 1 cut(s) 949
PfeI GAWTC 3 cut(s) 143, 849, 945
PflFI GACNNNGTC 1 cut(s) 111
PflMI CCANNNNNTGG 1 cut(s) 537
PkrI GCNGC 2 cut(s) 179, 1470
PleI GAGTC 4 cut(s) 363, 640, 915, 1330
PpsI GAGTC 4 cut(s) 363, 640, 915, 1330
PscI ACATGT 3 cut(s) 512, 717, 1382
Psp124BI GAGCTC 1 cut(s) 453
PspEI GGTNACC 2 cut(s) 413, 1084
PspN4I GGNNCC 1 cut(s) 795
PspPI GGNCC 4 cut(s) 229, 288, 787, 1466
PsuI RGATCY 1 cut(s) 475
PsyI GACNNNGTC 1 cut(s) 111
PvuII CAGCTG 1 cut(s) 590
RsaI GTAC 6 cut(s) 681, 701, 765, 822, 940, 1047
RsaNI GTAC 6 cut(s) 680, 700, 764, 821, 939, 1046
RseI CAYNNNNRTG 2 cut(s) 56, 899
SacI GAGCTC 1 cut(s) 453
SaqAI TTAA 3 cut(s) 857, 1245, 1298
SatI GCNGC 2 cut(s) 178, 1469
Sau96I GGNCC 4 cut(s) 229, 288, 787, 1466
ScaI AGTACT 2 cut(s) 822, 1047
SchI GAGTC 4 cut(s) 364, 641, 916, 1330
ScrFI CCNGG 2 cut(s) 790, 791
SduI GDGCHC 2 cut(s) 82, 453
SfaNI GCATC 7 cut(s) 175, 259, 392, 617, 670, 873, 1248
SinI GGWCC 2 cut(s) 229, 288
SmaI CCCGGG 1 cut(s) 791
SmiMI CAYNNNNRTG 2 cut(s) 56, 899
SmlI CTYRAG 1 cut(s) 1217
SmoI CTYRAG 1 cut(s) 1217
SpeI ACTAGT 1 cut(s) 766
Sse9I AATT 9 cut(s) 8, 734, 755, 811, 870, 1141, 1150, 1246, 1256
SsiI CCGC 4 cut(s) 697, 712, 1261, 1469
SspMI CTAG 5 cut(s) 89, 473, 767, 983, 1038
SstI GAGCTC 1 cut(s) 453
StyD4I CCNGG 2 cut(s) 788, 789
StyI CCWWGG 1 cut(s) 232
TaaI ACNGT 3 cut(s) 58, 1007, 1045
TaqI TCGA 7 cut(s) 386, 467, 1051, 1102, 1205, 1308, 1345
TasI AATT 9 cut(s) 8, 734, 755, 811, 870, 1141, 1150, 1246, 1256
TatI WGTACW 2 cut(s) 820, 1045
TauI GCSGC 1 cut(s) 1471
TfiI GAWTC 3 cut(s) 143, 849, 945
Tru1I TTAA 3 cut(s) 857, 1245, 1298
Tru9I TTAA 3 cut(s) 857, 1245, 1298
TscAI CASTG 1 cut(s) 63
TseFI GTSAC 3 cut(s) 424, 1084, 1378
TseI GCWGC 1 cut(s) 177
Tsp45I GTSAC 3 cut(s) 424, 1084, 1378
TspDTI ATGAA 8 cut(s) 120, 228, 324, 354, 578, 864, 999, 1404
TspMI CCCGGG 1 cut(s) 789
TspRI CASTG 1 cut(s) 63
Tth111I GACNNNGTC 1 cut(s) 111
Van91I CCANNNNNTGG 1 cut(s) 537
VneI GTGCAC 1 cut(s) 78
VpaK11BI GGWCC 2 cut(s) 229, 288
XagI CCTNNNNNAGG 1 cut(s) 1079
XapI RAATTY 4 cut(s) 8, 734, 1141, 1256
XbaI TCTAGA 2 cut(s) 88, 982
XceI RCATGY 4 cut(s) 516, 661, 721, 1386
XcmI CCANNNNNNNNNTGG 1 cut(s) 58
XmaI CCCGGG 1 cut(s) 789
XmiI GTMKAC 1 cut(s) 910
XmnI GAANNNNTTC 1 cut(s) 949
XspI CTAG 5 cut(s) 89, 473, 767, 983, 1038
ZrmI AGTACT 2 cut(s) 822, 1047
Zsp2I ATGCAT 2 cut(s) 663, 1280
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.