RLG00000021073

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Forward (+)
71708740 .. 71711910
3171 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000021073

Sequence Viewer

Length: 2259 bp
ATGGCGGTGGAGCTTTTCGGAGGTGCTGTTTTAGGAACAGCATTCGGTAAACTCTACGATGGCGTTGAAGATCTGATTGCCAAGAACCGCTTGTTCAGAAATTTCTTCCAAAACATCAAATCCAGGCTAGACGCTCTGAACCCACTCATGGCCGAGATGGCTCGGTCTAACCAGCAACTGTCTTACACACAGAACGATGAGCTTAGAGGTTTAGAAGAAGTACTAAAGGTCGGCGAAGAGCTTGTTCTAAAGTGCTCAAATGTTAGGCGGTGGGATCTCTACAGAAAGTACAAATATGCCACAAAACTTCTTGCATGGGAAAAAGATCTTGAAACACAATTGCTGCAGCTGCAGGTGCATGGAATCAGGGATGGGAGGAAGACCGCGGAGGCAGTAGAGAATATAGGGGTTTCGACGGGGAAGATGCAGGCTTCTTTAGCAACTATCGATGTTTCTGTAGGGAGTGTGAAGGAGGGGGTCAACCAAATTTCTAGTACCCTGGACGGCATGAAAGAGAATTTTGTGATACAAGACCGATCTGCTGAAAGTAAAGCTTGGTGTGCAGTCCCTGACCTTCCAGAGGTTATAGTTGGATTGGAAGCTCCTTTGAAGGATTTGAAGACAAAGCTTCTTGGGAATGATGGATTCTTAATGCTTGTGGTCACTGCTCCTGGAGGATGTGGGAAAACTACCTTGGCAACGAACTTTTGCAAAGATCAGGAAGTCAAAGATAAATTCGGCAAAAATATCTTCTTTGTCACTGTTTCGAAGATGCATAGCTTAAATTCTATTGTAGAACAACTATATCGACACAAGGGTTCTCAAGTTCCTGCTTTCCAAAATGAAGTGAATGCAGTTCAGTGGCTGCAAACATTTTTGAAGGAAGAAGGAGAGAAACCTTCACTGTTGGTCTTGGATGATGTTTGGTCTGGATCAGAATCTCTTCTTGACAAATTTGAATGCAGAATGGCAAATATTAAGATTCTTGTGACATCAAGATCTGAATTTCCCGCGTTCAGTCCTCTATATCGTTTAAACATGTTGGATAATGACGATGCAATGGAACTGTTTCGTCATTCAGCATCATTGAATGATAAGAGCTCTCATATTCCAGCACATCTTTCAAGAAAGATAGTAAAGCGTTGTAAGGGATTTCCACTTGCCATTACAGTGGTGGGCAGATCGCTTCGTGCACAACCTCTAGAGATGTGGCAAAACAGACTAAGTCAATGGTCTAAAGGTTCATCTGTTTTTGATTTTGAGACTGATTTACTTCTTTGCCTCCAAAGCAGCTTGGATGCTTTGGACAAGGAAAGGGCTATCATCAGAGAATGTTTCTTGGACCTTGGTTCATTTCCTGAAGACAAAGAAATCCCCGTTGATGCCCTCATTGATATATGGTCCGAGTTATATGAAATTGATGAAGACACTTCGTGTATTGCAAACCTTTATGAACTCAACAATCGGAGTCTTGCTAATCTTATAGACAGAAGGAATTCGAAGTTGGATGGGGAAGGATATTATGCTGACCAGTATGTCACCCAACATGATGTGCTTAGGGAGCTGGCTATTTATCACTCGAAACTAGATCCGGTAGAGCATAGAGAAAGATTGATCATAGACATATGTGGAAGCAGTCTTCCCAAGTGGTGGAGGGAACAAAAGTATCAAGTTATGAAAGCTCGCCTTCTATCTATATCAACTGATGGAGAGTCTTCAACTTCGAAATGGCCCAGCATGCATCTGCCAGAAACAGAGGTACTGCTCTTGAATTTTCCGAAGACAGAACATGCTATACCCGAATTTGTGGAGAAAATGGACAAACTGAAGGTACTTGTAATCACAAGTGAGGATCTCTGGGGTACAGCTCCCTTGCGTCGAGGACTTCGAGTATGGGCTTTGCCTGACGAGATTGGAAATTTGATCAATTTACAAGTATTGATGCTGAGGTCATTGCCTCCTCTTTCAAAGCTTCCAAACTCGATCAAAAACCTCCACAAGTTGAACTTTCTTGGCATCTTTAATTGCATCAACTTTGGCGAGTTACCTGAATGCATTGGTGAAATGAGGAGTTTAAGAAAGATCGACTTGAGACGTTGCTGGTCATTGAAGAAGCTGCCTGGATCAGTATTGGATTTGAAGCAGTTAGAGGAGGTGATATGTGATGAAGATACAGAAAGCTTATGGAAATCCCTGTTGCCCAGCTTCAGAGACAGAAACCAAGACATACGCCTAGTGATTGGGCCGCCACGAAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

753

Amino Acids

85.49

Weight (kDa)

5.99

Isoelectric Point (pI)

43.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RPW8 PF05659 4 - 130 7.2e-21 Arabidopsis broad-spectrum mildew resistance protein RPW8
NB-ARC PF00931 200 - 361 8.5e-17 NB-ARC domain
AAA_22 PF13401 218 - 308 6.6e-06 AAA domain
LRR_14 PF23598 630 - 733 1.3e-10 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 343
AasI GACNNNNNNGTC 1 cut(s) 1535
Acc36I ACCTGC 1 cut(s) 343
AccB7I CCANNNNNTGG 1 cut(s) 1650
AccII CGCG 2 cut(s) 386, 1013
AciI CCGC 7 cut(s) 5, 88, 268, 384, 386, 1011, 2246
AclWI GGATC 5 cut(s) 282, 940, 1583, 1860, 2131
AcoI YGGCCR 1 cut(s) 150
AcuI CTGAAG 3 cut(s) 1380, 1847, 2191
AdeI CACNNNGTG 1 cut(s) 1434
AfaI GTAC 6 cut(s) 222, 290, 496, 1761, 1833, 1864
AfiI CCNNNNNNNGG 3 cut(s) 148, 580, 1650
AflIII ACRYGT 1 cut(s) 1038
AjnI CCWGG 4 cut(s) 122, 498, 670, 2119
AjuI GAANNNNNNNTTGG 4 cut(s) 677, 709, 1487, 1519
AleI CACNNNNGTG 1 cut(s) 2254
Alw21I GWGCWC 3 cut(s) 257, 1103, 1195
Alw26I GTCTC 3 cut(s) 1256, 2086, 2205
Alw44I GTGCAC 1 cut(s) 1191
AlwI GGATC 5 cut(s) 282, 940, 1583, 1860, 2131
AlwNI CAGNNNCTG 3 cut(s) 178, 569, 865
AoxI GGCC 3 cut(s) 150, 1730, 2243
ApaLI GTGCAC 1 cut(s) 1191
ApeKI GCWGC 6 cut(s) 343, 346, 349, 865, 1290, 2116
Asp700I GAANNNNTTC 3 cut(s) 942, 1068, 1495
AspS9I GGNCC 4 cut(s) 1342, 1401, 1731, 2243
AsuHPI GGTGA 3 cut(s) 1531, 2072, 2167
AsuII TTCGAA 3 cut(s) 767, 1499, 1724
AvaII GGWCC 2 cut(s) 1342, 1401
BaeGI GKGCMC 1 cut(s) 1195
BaeI ACNNNNGTAYC 2 cut(s) 1649, 1682
BanII GRGCYC 1 cut(s) 1103
BbsI GAAGAC 7 cut(s) 386, 626, 1368, 1431, 1631, 1707, 1787
Bbv12I GWGCWC 3 cut(s) 257, 1103, 1195
BbvCI CCTCAGC 1 cut(s) 1946
BbvI GCAGC 6 cut(s) 330, 336, 358, 852, 1302, 2103
BccI CCATC 6 cut(s) 53, 151, 365, 635, 1502, 1700
BceAI ACGGC 1 cut(s) 520
BciT130I CCWGG 4 cut(s) 124, 500, 672, 2121
BclI TGATCA 2 cut(s) 1614, 1923
BcoDI GTCTC 3 cut(s) 1256, 2086, 2205
BfaI CTAG 5 cut(s) 128, 492, 1202, 1586, 2234
BfmI CTRYAG 4 cut(s) 280, 344, 350, 456
BfuAI ACCTGC 1 cut(s) 343
BglI GCCNNNNNGGC 1 cut(s) 158
BglII AGATCT 3 cut(s) 70, 325, 998
BisI GCNGC 7 cut(s) 344, 347, 350, 866, 1291, 2117, 2246
BlsI GCNGC 7 cut(s) 345, 348, 351, 867, 1292, 2118, 2247
BmcAI AGTACT 1 cut(s) 222
Bme1390I CCNGG 4 cut(s) 124, 500, 672, 2121
Bme18I GGWCC 2 cut(s) 1342, 1401
BmgT120I GGNCC 4 cut(s) 1342, 1401, 1731, 2243
BmrFI CCNGG 4 cut(s) 124, 500, 672, 2121
BpiI GAAGAC 7 cut(s) 386, 626, 1368, 1431, 1631, 1707, 1787
BpmI CTGGAG 1 cut(s) 693
Bpu10I CCTNAGC 2 cut(s) 1556, 1946
Bpu14I TTCGAA 3 cut(s) 767, 1499, 1724
BpuEI CTTGAG 2 cut(s) 807, 2110
Bsa29I ATCGAT 1 cut(s) 447
BsaBI GATNNNNATC 1 cut(s) 937
BsaJI CCNNGG 4 cut(s) 384, 498, 693, 1345
BsaWI WCCGGW 1 cut(s) 1591
BsaXI ACNNNNNCTCC 2 cut(s) 12, 42
Bsc4I CCNNNNNNNGG 3 cut(s) 148, 580, 1650
Bse1I ACTGG 1 cut(s) 1531
Bse3DI GCAATG 2 cut(s) 1065, 1952
Bse8I GATNNNNATC 1 cut(s) 937
BseBI CCWGG 4 cut(s) 124, 500, 672, 2121
BseCI ATCGAT 1 cut(s) 447
BseDI CCNNGG 4 cut(s) 384, 498, 693, 1345
BseGI GGATG 5 cut(s) 376, 683, 922, 1303, 1513
BseJI GATNNNNATC 1 cut(s) 937
BseLI CCNNNNNNNGG 3 cut(s) 148, 580, 1650
BseMI GCAATG 2 cut(s) 1065, 1952
BseMII CTCAG 1 cut(s) 1937
BseNI ACTGG 1 cut(s) 1531
BseRI GAGGAG 3 cut(s) 1950, 2083, 2165
BseSI GKGCMC 1 cut(s) 1195
BseXI GCAGC 6 cut(s) 330, 336, 358, 852, 1302, 2103
BseYI CCCAGC 2 cut(s) 1733, 2201
BsgI GTGCAG 1 cut(s) 582
Bsh1236I CGCG 2 cut(s) 386, 1013
BshFI GGCC 3 cut(s) 152, 1732, 2245
BshVI ATCGAT 1 cut(s) 447
BsiHKAI GWGCWC 3 cut(s) 257, 1103, 1195
BsiSI CCGG 1 cut(s) 1592
BslFI GGGAC 1 cut(s) 551
BslI CCNNNNNNNGG 3 cut(s) 148, 580, 1650
BsmAI GTCTC 3 cut(s) 1256, 2086, 2205
BsmBI CGTCTC 1 cut(s) 2086
BsmFI GGGAC 1 cut(s) 551
BsmI GAATGC 4 cut(s) 41, 856, 965, 2057
BsnI GGCC 3 cut(s) 152, 1732, 2245
Bsp119I TTCGAA 3 cut(s) 767, 1499, 1724
Bsp1286I GDGCHC 3 cut(s) 257, 1103, 1195
BspACI CCGC 7 cut(s) 5, 88, 268, 384, 386, 1011, 2246
BspANI GGCC 3 cut(s) 152, 1732, 2245
BspCNI CTCAG 1 cut(s) 1938
BspDI ATCGAT 1 cut(s) 447
BspFNI CGCG 2 cut(s) 386, 1013
BspMAI CTGCAG 2 cut(s) 348, 354
BspMI ACCTGC 1 cut(s) 343
BspPI GGATC 5 cut(s) 282, 940, 1583, 1860, 2131
BspQI GCTCTTC 1 cut(s) 231
BspT104I TTCGAA 3 cut(s) 767, 1499, 1724
BsrDI GCAATG 2 cut(s) 1065, 1952
BsrI ACTGG 1 cut(s) 1531
BssECI CCNNGG 4 cut(s) 384, 498, 693, 1345
BssT1I CCWWGG 2 cut(s) 693, 1345
Bst2UI CCWGG 4 cut(s) 124, 500, 672, 2121
Bst4CI ACNGT 5 cut(s) 180, 763, 906, 1068, 1171
Bst6I CTCTTC 2 cut(s) 231, 948
BstBI TTCGAA 3 cut(s) 767, 1499, 1724
BstC8I GCNNGC 4 cut(s) 429, 1566, 1684, 1739
BstDEI CTNAG 4 cut(s) 203, 1223, 1556, 1946
BstDSI CCRYGG 1 cut(s) 384
BstENI CCTNNNNNAGG 1 cut(s) 578
BstF5I GGATG 5 cut(s) 376, 683, 922, 1303, 1513
BstFNI CGCG 2 cut(s) 386, 1013
BstMAI GTCTC 3 cut(s) 1256, 2086, 2205
BstMWI GCNNNNNNNGC 8 cut(s) 158, 349, 355, 437, 560, 1287, 1561, 1738
BstNI CCWGG 4 cut(s) 124, 500, 672, 2121
BstNSI RCATGY 3 cut(s) 1042, 1741, 1793
BstSCI CCNGG 4 cut(s) 122, 498, 670, 2119
BstSFI CTRYAG 4 cut(s) 280, 344, 350, 456
BstSLI GKGCMC 1 cut(s) 1195
BstUI CGCG 2 cut(s) 386, 1013
BstV1I GCAGC 6 cut(s) 330, 336, 358, 852, 1302, 2103
BstV2I GAAGAC 7 cut(s) 386, 626, 1368, 1431, 1631, 1707, 1787
BstX2I RGATCY 6 cut(s) 70, 274, 325, 998, 1588, 1852
BstXI CCANNNNNNTGG 1 cut(s) 1171
BstYI RGATCY 6 cut(s) 70, 274, 325, 998, 1588, 1852
Bsu15I ATCGAT 1 cut(s) 447
BsuRI GGCC 3 cut(s) 152, 1732, 2245
BsuTUI ATCGAT 1 cut(s) 447
BtgI CCRYGG 1 cut(s) 384
BtsCI GGATG 5 cut(s) 376, 683, 922, 1303, 1513
BtsI GCAGTG 1 cut(s) 663
BtsIMutI CAGTG 5 cut(s) 663, 759, 866, 902, 1176
BveI ACCTGC 1 cut(s) 343
Cac8I GCNNGC 4 cut(s) 429, 1566, 1684, 1739
CaiI CAGNNNCTG 3 cut(s) 178, 569, 865
Cfr13I GGNCC 4 cut(s) 1342, 1401, 1731, 2243
Cfr42I CCGCGG 1 cut(s) 387
ClaI ATCGAT 1 cut(s) 447
CseI GACGC 2 cut(s) 140, 1865
Csp6I GTAC 6 cut(s) 221, 289, 495, 1760, 1832, 1863
CviAII CATG 8 cut(s) 148, 315, 359, 508, 1039, 1547, 1738, 1790
CviQI GTAC 6 cut(s) 221, 289, 495, 1760, 1832, 1863
DdeI CTNAG 4 cut(s) 203, 1223, 1556, 1946
DraI TTTAAA 1 cut(s) 1035
DraIII CACNNNGTG 1 cut(s) 1434
DrdI GACNNNNNNGTC 1 cut(s) 1535
DseDI GACNNNNNNGTC 1 cut(s) 1535
EaeI YGGCCR 1 cut(s) 150
Eam1104I CTCTTC 2 cut(s) 231, 948
EarI CTCTTC 2 cut(s) 231, 948
Ecl136II GAGCTC 1 cut(s) 1101
Eco130I CCWWGG 2 cut(s) 693, 1345
Eco24I GRGCYC 1 cut(s) 1103
Eco47I GGWCC 2 cut(s) 1342, 1401
Eco53kI GAGCTC 1 cut(s) 1101
Eco57I CTGAAG 3 cut(s) 1380, 1847, 2191
EcoICRI GAGCTC 1 cut(s) 1101
EcoNI CCTNNNNNAGG 1 cut(s) 578
EcoRI GAATTC 1 cut(s) 1495
EcoRII CCWGG 4 cut(s) 122, 498, 670, 2119
EcoT14I CCWWGG 2 cut(s) 693, 1345
EcoT22I ATGCAT 3 cut(s) 777, 1743, 2057
EcoT38I GRGCYC 1 cut(s) 1103
ErhI CCWWGG 2 cut(s) 693, 1345
Esp3I CGTCTC 1 cut(s) 2086
FaeI CATG 8 cut(s) 151, 318, 362, 511, 1042, 1550, 1741, 1793
FaqI GGGAC 1 cut(s) 551
FatI CATG 8 cut(s) 147, 314, 358, 507, 1038, 1546, 1737, 1789
FauI CCCGC 1 cut(s) 1018
FauNDI CATATG 1 cut(s) 1625
FbaI TGATCA 2 cut(s) 1614, 1923
Fnu4HI GCNGC 7 cut(s) 344, 347, 350, 866, 1291, 2117, 2246
FokI GGATG 5 cut(s) 383, 690, 929, 1310, 1520
FriOI GRGCYC 1 cut(s) 1103
Fsp4HI GCNGC 7 cut(s) 344, 347, 350, 866, 1291, 2117, 2246
FspBI CTAG 5 cut(s) 128, 492, 1202, 1586, 2234
GluI GCNGC 7 cut(s) 344, 347, 350, 866, 1291, 2117, 2246
GsaI CCCAGC 2 cut(s) 1737, 2205
GsuI CTGGAG 1 cut(s) 693
HaeIII GGCC 3 cut(s) 152, 1732, 2245
HapII CCGG 1 cut(s) 1592
HgaI GACGC 2 cut(s) 140, 1865
Hin1II CATG 8 cut(s) 151, 318, 362, 511, 1042, 1550, 1741, 1793
HincII GTYRAC 1 cut(s) 481
HindII GTYRAC 1 cut(s) 481
HindIII AAGCTT 4 cut(s) 552, 626, 1970, 2179
HinfI GANTC 6 cut(s) 363, 645, 938, 982, 1468, 1712
HpaII CCGG 1 cut(s) 1592
HphI GGTGA 3 cut(s) 1531, 2072, 2167
Hpy166II GTNNAC 3 cut(s) 50, 481, 1193
Hpy8I GTNNAC 3 cut(s) 50, 481, 1193
Hpy99I CGWCG 2 cut(s) 418, 1881
HpyCH4III ACNGT 5 cut(s) 180, 763, 906, 1068, 1171
HpyCH4IV ACGT 1 cut(s) 2095
HpyF10VI GCNNNNNNNGC 8 cut(s) 158, 349, 355, 437, 560, 1287, 1561, 1738
HpyF3I CTNAG 4 cut(s) 203, 1223, 1556, 1946
HpySE526I ACGT 1 cut(s) 2095
Hsp92II CATG 8 cut(s) 151, 318, 362, 511, 1042, 1550, 1741, 1793
Ksp22I TGATCA 2 cut(s) 1614, 1923
KspI CCGCGG 1 cut(s) 387
LguI GCTCTTC 1 cut(s) 231
LmnI GCTCC 5 cut(s) 10, 607, 673, 1561, 1873
Lsp1109I GCAGC 6 cut(s) 330, 336, 358, 852, 1302, 2103
MaeI CTAG 5 cut(s) 128, 492, 1202, 1586, 2234
MaeII ACGT 1 cut(s) 2095
MaeIII GTNAC 5 cut(s) 661, 757, 988, 1537, 2043
MfeI CAATTG 1 cut(s) 338
MflI RGATCY 6 cut(s) 70, 274, 325, 998, 1588, 1852
MhlI GDGCHC 3 cut(s) 257, 1103, 1195
MlyI GAGTC 2 cut(s) 1477, 1721
MmeI TCCRAC 3 cut(s) 571, 1023, 1485
Mph1103I ATGCAT 3 cut(s) 777, 1743, 2057
MroXI GAANNNNTTC 3 cut(s) 942, 1068, 1495
MseI TTAA 6 cut(s) 650, 782, 978, 1034, 2022, 2075
MslI CAYNNNNRTG 2 cut(s) 1169, 2254
MspA1I CMGCKG 2 cut(s) 349, 386
MspI CCGG 1 cut(s) 1592
MspR9I CCNGG 4 cut(s) 124, 500, 672, 2121
MssI GTTTAAAC 1 cut(s) 1035
MunI CAATTG 1 cut(s) 338
Mva1269I GAATGC 4 cut(s) 41, 856, 965, 2057
MvaI CCWGG 4 cut(s) 124, 500, 672, 2121
MvnI CGCG 2 cut(s) 386, 1013
MwoI GCNNNNNNNGC 8 cut(s) 158, 349, 355, 437, 560, 1287, 1561, 1738
NdeI CATATG 1 cut(s) 1625
NlaIII CATG 8 cut(s) 151, 318, 362, 511, 1042, 1550, 1741, 1793
NmeAIII GCCGAG 1 cut(s) 178
NmuCI GTSAC 4 cut(s) 661, 757, 988, 1537
NsiI ATGCAT 3 cut(s) 777, 1743, 2057
NspI RCATGY 3 cut(s) 1042, 1741, 1793
NspV TTCGAA 3 cut(s) 767, 1499, 1724
OliI CACNNNNGTG 1 cut(s) 2254
PaeI GCATGC 1 cut(s) 1741
PaqCI CACCTGC 1 cut(s) 343
PciI ACATGT 1 cut(s) 1038
PciSI GCTCTTC 1 cut(s) 231
PcsI WCGNNNNNNNCGW 1 cut(s) 1885
PctI GAATGC 4 cut(s) 41, 856, 965, 2057
PdmI GAANNNNTTC 3 cut(s) 942, 1068, 1495
PfeI GAWTC 4 cut(s) 363, 645, 938, 982
PflFI GACNNNGTC 1 cut(s) 1224
PflMI CCANNNNNTGG 1 cut(s) 1650
PfoI TCCNGGA 1 cut(s) 670
PkrI GCNGC 7 cut(s) 345, 348, 351, 867, 1292, 2118, 2247
PleI GAGTC 2 cut(s) 1476, 1720
PmeI GTTTAAAC 1 cut(s) 1035
PpsI GAGTC 2 cut(s) 1476, 1720
PscI ACATGT 1 cut(s) 1038
Psp124BI GAGCTC 1 cut(s) 1103
Psp6I CCWGG 4 cut(s) 122, 498, 670, 2119
PspFI CCCAGC 2 cut(s) 1733, 2201
PspGI CCWGG 4 cut(s) 122, 498, 670, 2119
PspPI GGNCC 4 cut(s) 1342, 1401, 1731, 2243
PsrI GAACNNNNNNTAC 2 cut(s) 1779, 1811
PstI CTGCAG 2 cut(s) 348, 354
PstNI CAGNNNCTG 3 cut(s) 178, 569, 865
PsuI RGATCY 6 cut(s) 70, 274, 325, 998, 1588, 1852
PsyI GACNNNGTC 1 cut(s) 1224
PvuII CAGCTG 1 cut(s) 349
RsaI GTAC 6 cut(s) 222, 290, 496, 1761, 1833, 1864
RsaNI GTAC 6 cut(s) 221, 289, 495, 1760, 1832, 1863
RseI CAYNNNNRTG 2 cut(s) 1169, 2254
SacI GAGCTC 1 cut(s) 1103
SacII CCGCGG 1 cut(s) 387
SapI GCTCTTC 1 cut(s) 231
SaqAI TTAA 6 cut(s) 650, 782, 978, 1034, 2022, 2075
SatI GCNGC 7 cut(s) 344, 347, 350, 866, 1291, 2117, 2246
Sau96I GGNCC 4 cut(s) 1342, 1401, 1731, 2243
ScaI AGTACT 1 cut(s) 222
SchI GAGTC 2 cut(s) 1477, 1721
ScrFI CCNGG 4 cut(s) 124, 500, 672, 2121
SduI GDGCHC 3 cut(s) 257, 1103, 1195
SfcI CTRYAG 4 cut(s) 280, 344, 350, 456
Sfr303I CCGCGG 1 cut(s) 387
SfuI TTCGAA 3 cut(s) 767, 1499, 1724
SgrBI CCGCGG 1 cut(s) 387
SinI GGWCC 2 cut(s) 1342, 1401
SmiMI CAYNNNNRTG 2 cut(s) 1169, 2254
SmlI CTYRAG 2 cut(s) 822, 2089
SmoI CTYRAG 2 cut(s) 822, 2089
SphI GCATGC 1 cut(s) 1741
SsiI CCGC 7 cut(s) 5, 88, 268, 384, 386, 1011, 2246
SspI AATATT 1 cut(s) 976
SspMI CTAG 5 cut(s) 128, 492, 1202, 1586, 2234
SstI GAGCTC 1 cut(s) 1103
StyD4I CCNGG 4 cut(s) 122, 498, 670, 2119
StyI CCWWGG 2 cut(s) 693, 1345
TaaI ACNGT 5 cut(s) 180, 763, 906, 1068, 1171
TaiI ACGT 1 cut(s) 2098
TaqII GACCGA 2 cut(s) 153, 549
TatI WGTACW 2 cut(s) 220, 288
TauI GCSGC 1 cut(s) 2248
TfiI GAWTC 4 cut(s) 363, 645, 938, 982
Tru1I TTAA 6 cut(s) 650, 782, 978, 1034, 2022, 2075
Tru9I TTAA 6 cut(s) 650, 782, 978, 1034, 2022, 2075
TscAI CASTG 5 cut(s) 670, 766, 866, 909, 1176
TseFI GTSAC 4 cut(s) 661, 757, 988, 1537
TseI GCWGC 6 cut(s) 343, 346, 349, 865, 1290, 2116
Tsp45I GTSAC 4 cut(s) 661, 757, 988, 1537
TspDTI ATGAA 9 cut(s) 524, 858, 1233, 1341, 1428, 1437, 1467, 1691, 2181
TspRI CASTG 5 cut(s) 670, 766, 866, 909, 1176
Tth111I GACNNNGTC 1 cut(s) 1224
Van91I CCANNNNNTGG 1 cut(s) 1650
VneI GTGCAC 1 cut(s) 1191
VpaK11BI GGWCC 2 cut(s) 1342, 1401
XagI CCTNNNNNAGG 1 cut(s) 578
XbaI TCTAGA 1 cut(s) 1201
XceI RCATGY 3 cut(s) 1042, 1741, 1793
XcmI CCANNNNNNNNNTGG 1 cut(s) 1171
XmnI GAANNNNTTC 3 cut(s) 942, 1068, 1495
XspI CTAG 5 cut(s) 128, 492, 1202, 1586, 2234
ZrmI AGTACT 1 cut(s) 222
Zsp2I ATGCAT 3 cut(s) 777, 1743, 2057
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.