Rmu_sc0002576.1_g000003

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002576.1
OG0000039
Physical Location & Seq
Forward (+)
6470 .. 9815
3346 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002576.1_g000003.1.cds

Sequence Viewer

Length: 2175 bp
atgatcaacccactggataaacttttcagtgatctctgcgatggctttaaagacctcatcaagacaaatattgaatttaaaggcagactcaaaggcatcgaagccaagctagaagatctaaagccggtgattcgacacatggtgcagagtaatgaggtattagatctcccaaggaacgaactaaaaggtttaacagaagttatgaagtctggcatcgagctcactgtcaagtgctcaaagtctcggaagtggatgcccttcacgaggtacaagtacgccaacaaacttactgaatgggagaaaagtctacaaagtcagttacatagactgaatgtgtacaccgccagggatgtgaaggacaccgcaagagaggtgaaggagattgcaggggttgtgaaggggattgcagcggttgtgaaggagactgcagatagattgggccaaattgtgatacaacctggggaatctaaagcttggatgactacagaagtacctgaacttccaggttacacagtaggattggacacgcatgtgaaggaattgaagatgaaggttgtcaaggatggggcgtcaatgcttgtaataacagctcctggagggtctggcaaaaccactttggctaaaatgttatatcatgatgataaagtcaaaggcagtgcaatcagctggctgaaggaatttctgaaggaaactgcacaagagcctttgcttctcatcctggatgatgtttggtctgagtcaaaatcccttcttgagaagttaaatgaactatgtgtacagtcaaatttcagcatcttggtgacatcaagatcttcatttccaagttttgcttctcaatatcctttacatgcattgaatcacaaagatgcaacagctctttttcgccattcagcaatccggggagataagagctataatgttccaaaaaatcttcagaacaagatagtaaggcgctgtaagggatgtccacttgccattaaagtggtcggaagatctctttgtggagaatttacagagtcatggcttaaaaaattaagcgagtggtctgaaggtgcttctatttttgataccgagactgaagagcttctttgcctcaaaagtagcttagacgccttggatgaaaaagatcaaactatcaaggaatgcttcttggacctgggtgcatttcctgaagatcaaagaatcccagctgttgctctgattgatatgtgggcggagttatatggcatggaagattttctttccattcaaaagctccaggagctttccagccgaagcctggctagtcttgtagtcacaaggaaggaaaaggaggaggcggatggctactacagtgaacacttcgtctcccagcatgatctgctcagggatctagctatctaccaagcgaaattagatccaaataaaacgagactgattttacacaaatgtggagacaaagttcccaagaagttgatagaacagaagcatcaatcctttcagactcgcgtattatccatctcctctgatggagtgttctcaacagatatgcacaagattcaactttcagatgttgaggttctagttttgaattttcagtcagagaactatgctttacccaactttgtggcggacatggaaaagttgaaggtcctaatagtcacaaataatggtttcttaccagctgaattgagtaactttcaactactgtattccttgccaaatctgaagagaatcagactagagcgaatttcaattcctttcataaccaagaatcccatacagttgaagagtgtaaagaagatctctttattcatgtgtagcatcggtcaagctttcagcaactcttccttccaaatttcatatgcatttccaaatctacaggaattgaacattgactattgcagtgacttggtggaattatctggtgatctcagtgatctgattgagctaaagaatctcagtatcacccactgtcacaagctatctgccttgcctgaagagatcgcctcaatcaagaacctcggaaagtctcagattatcgacatacctgattgcttcagcatcaaggagttgcctgacgacattggtgaactaagcactctagaaaagatcaatatgagacattgctctagactgcaagttctacctccatcagtttctaagcttaagaaactggaggagtggaggaggtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
NB-ARC RPW8

Protein Analysis

724

Amino Acids

81.91

Weight (kDa)

7.51

Isoelectric Point (pI)

39.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 307
AccII CGCG 1 cut(s) 1488
AciI CCGC 6 cut(s) 342, 363, 410, 1214, 1319, 1610
AclWI GGATC 2 cut(s) 1377, 1391
AcsI RAATTY 7 cut(s) 74, 677, 784, 1007, 1570, 1728, 1836
AcuI CTGAAG 9 cut(s) 692, 704, 917, 1068, 1098, 1191, 1727, 1998, 2023
AcyI GRCGYC 2 cut(s) 569, 1110
AdeI CACNNNGTG 1 cut(s) 142
AfaI GTAC 5 cut(s) 269, 275, 338, 492, 777
AfiI CCNNNNNNNGG 2 cut(s) 264, 1279
AflII CTTAAG 1 cut(s) 2147
AjnI CCWGG 8 cut(s) 344, 457, 502, 592, 717, 1155, 1257, 1278
AjuI GAANNNNNNNTTGG 2 cut(s) 814, 846
AleI CACNNNNGTG 2 cut(s) 530, 1428
AloI GAACNNNNNNTCC 2 cut(s) 1425, 1457
Alw21I GWGCWC 2 cut(s) 222, 236
Alw26I GTCTC 8 cut(s) 246, 416, 1067, 1351, 1405, 1428, 2016, 2095
AlwI GGATC 2 cut(s) 1377, 1391
AlwNI CAGNNNCTG 1 cut(s) 593
AoxI GGCC 1 cut(s) 439
ApeKI GCWGC 1 cut(s) 407
ApoI RAATTY 7 cut(s) 74, 677, 784, 1007, 1570, 1728, 1836
Asp700I GAANNNNTTC 2 cut(s) 1083, 1236
AspLEI GCGC 1 cut(s) 954
AspS9I GGNCC 3 cut(s) 439, 1153, 1630
AsuC2I CCSGG 1 cut(s) 899
AsuHPI GGTGA 6 cut(s) 139, 385, 811, 1919, 1939, 2081
AvaII GGWCC 2 cut(s) 1153, 1630
BaeI ACNNNNGTAYC 2 cut(s) 474, 507
BanII GRGCYC 1 cut(s) 222
BarI GAAGNNNNNNTAC 2 cut(s) 483, 515
BauI CACGAG 1 cut(s) 262
Bbv12I GWGCWC 2 cut(s) 222, 236
BbvI GCAGC 1 cut(s) 419
BccI CCATC 6 cut(s) 35, 557, 1316, 1502, 1505, 2140
BciT130I CCWGG 8 cut(s) 346, 459, 504, 594, 719, 1157, 1259, 1280
BclI TGATCA 1 cut(s) 3
BcnI CCSGG 1 cut(s) 899
BcoDI GTCTC 8 cut(s) 246, 416, 1067, 1351, 1405, 1428, 2016, 2095
BfaI CTAG 7 cut(s) 110, 1284, 1373, 1562, 1721, 2084, 2112
BfmI CTRYAG 4 cut(s) 426, 483, 1330, 1859
BfoI RGCGCY 1 cut(s) 955
BfrI CTTAAG 1 cut(s) 2147
BglII AGATCT 5 cut(s) 115, 163, 809, 992, 1782
BisI GCNGC 1 cut(s) 408
BlsI GCNGC 1 cut(s) 409
Bme1390I CCNGG 9 cut(s) 346, 459, 504, 594, 719, 899, 1157, 1259, 1280
Bme18I GGWCC 2 cut(s) 1153, 1630
BmgT120I GGNCC 3 cut(s) 439, 1153, 1630
BmrFI CCNGG 9 cut(s) 346, 459, 504, 594, 719, 899, 1157, 1259, 1280
BmsI GCATC 8 cut(s) 105, 222, 243, 801, 856, 1477, 1812, 2052
BplI GAGNNNNNCTC 2 cut(s) 1973, 2005
BpmI CTGGAG 2 cut(s) 615, 1241
Bpu10I CCTNAGC 1 cut(s) 1364
BpuEI CTTGAG 1 cut(s) 773
BpuMI CCSGG 1 cut(s) 899
BsaHI GRCGYC 2 cut(s) 569, 1110
BsaJI CCNNGG 7 cut(s) 170, 345, 458, 898, 1113, 1156, 2002
BsaXI ACNNNNNCTCC 4 cut(s) 1331, 1361, 1425, 1455
Bsc4I CCNNNNNNNGG 2 cut(s) 264, 1279
Bse118I RCCGGY 1 cut(s) 124
Bse1I ACTGG 2 cut(s) 18, 2160
Bse3DI GCAATG 1 cut(s) 2104
BseBI CCWGG 8 cut(s) 346, 459, 504, 594, 719, 1157, 1259, 1280
BseDI CCNNGG 7 cut(s) 170, 345, 458, 898, 1113, 1156, 2002
BseGI GGATG 9 cut(s) 258, 355, 483, 568, 714, 727, 968, 1123, 1327
BseLI CCNNNNNNNGG 2 cut(s) 264, 1279
BseMI GCAATG 1 cut(s) 2104
BseMII CTCAG 5 cut(s) 726, 1378, 1927, 1954, 2027
BseNI ACTGG 2 cut(s) 18, 2160
BseRI GAGGAG 3 cut(s) 1328, 1492, 2174
BseXI GCAGC 1 cut(s) 419
BseYI CCCAGC 2 cut(s) 1186, 1350
BsgI GTGCAG 2 cut(s) 164, 678
Bsh1236I CGCG 1 cut(s) 1488
BshFI GGCC 1 cut(s) 441
BsiHKAI GWGCWC 2 cut(s) 222, 236
BsiSI CCGG 2 cut(s) 125, 898
BslI CCNNNNNNNGG 2 cut(s) 264, 1279
BsmAI GTCTC 8 cut(s) 246, 416, 1067, 1351, 1405, 1428, 2016, 2095
BsmBI CGTCTC 1 cut(s) 1351
BsmI GAATGC 1 cut(s) 1148
BsnI GGCC 1 cut(s) 441
Bsp1286I GDGCHC 2 cut(s) 222, 236
Bsp1407I TGTACA 2 cut(s) 336, 775
BspACI CCGC 6 cut(s) 342, 363, 410, 1214, 1319, 1610
BspANI GGCC 1 cut(s) 441
BspCNI CTCAG 5 cut(s) 727, 1377, 1926, 1953, 2026
BspFNI CGCG 1 cut(s) 1488
BspHI TCATGA 1 cut(s) 634
BspMAI CTGCAG 1 cut(s) 430
BspPI GGATC 2 cut(s) 1377, 1391
BspQI GCTCTTC 1 cut(s) 1074
BspTI CTTAAG 1 cut(s) 2147
BsrDI GCAATG 1 cut(s) 2104
BsrFI RCCGGY 1 cut(s) 124
BsrGI TGTACA 2 cut(s) 336, 775
BsrI ACTGG 2 cut(s) 18, 2160
BssAI RCCGGY 1 cut(s) 124
BssECI CCNNGG 7 cut(s) 170, 345, 458, 898, 1113, 1156, 2002
BssNI GRCGYC 2 cut(s) 569, 1110
BssSI CACGAG 1 cut(s) 262
BssT1I CCWWGG 2 cut(s) 170, 1113
Bst2BI CACGAG 1 cut(s) 262
Bst2UI CCWGG 8 cut(s) 346, 459, 504, 594, 719, 1157, 1259, 1280
Bst4CI ACNGT 7 cut(s) 226, 514, 780, 1334, 1689, 1764, 1955
Bst6I CTCTTC 5 cut(s) 1074, 1703, 1763, 1831, 1974
BstACI GRCGYC 2 cut(s) 569, 1110
BstAFI CTTAAG 1 cut(s) 2147
BstAPI GCANNNNNTGC 1 cut(s) 1360
BstAUI TGTACA 2 cut(s) 336, 775
BstC8I GCNNGC 1 cut(s) 668
BstDEI CTNAG 8 cut(s) 735, 1105, 1364, 1913, 1940, 2013, 2075, 2142
BstENI CCTNNNNNAGG 1 cut(s) 262
BstF5I GGATG 9 cut(s) 258, 355, 483, 568, 714, 727, 968, 1123, 1327
BstFNI CGCG 1 cut(s) 1488
BstH2I RGCGCY 1 cut(s) 955
BstHHI GCGC 1 cut(s) 954
BstMAI GTCTC 8 cut(s) 246, 416, 1067, 1351, 1405, 1428, 2016, 2095
BstMWI GCNNNNNNNGC 2 cut(s) 1261, 1360
BstNI CCWGG 8 cut(s) 346, 459, 504, 594, 719, 1157, 1259, 1280
BstNSI RCATGY 2 cut(s) 533, 851
BstSCI CCNGG 9 cut(s) 344, 457, 502, 592, 717, 897, 1155, 1257, 1278
BstSFI CTRYAG 4 cut(s) 426, 483, 1330, 1859
BstUI CGCG 1 cut(s) 1488
BstV1I GCAGC 1 cut(s) 419
BstX2I RGATCY 7 cut(s) 115, 163, 809, 992, 1369, 1396, 1782
BstXI CCANNNNNNTGG 2 cut(s) 982, 1606
BstYI RGATCY 7 cut(s) 115, 163, 809, 992, 1369, 1396, 1782
BsuRI GGCC 1 cut(s) 441
BtgZI GCGATG 1 cut(s) 54
BtsCI GGATG 9 cut(s) 258, 355, 483, 568, 714, 727, 968, 1123, 1327
BtsI GCAGTG 2 cut(s) 661, 1891
BtsIMutI CAGTG 8 cut(s) 11, 34, 222, 661, 1339, 1891, 1921, 1951
Cac8I GCNNGC 1 cut(s) 668
CaiI CAGNNNCTG 1 cut(s) 593
CciI TCATGA 1 cut(s) 634
CfoI GCGC 1 cut(s) 954
Cfr10I RCCGGY 1 cut(s) 124
Cfr13I GGNCC 3 cut(s) 439, 1153, 1630
CseI GACGC 2 cut(s) 558, 1118
Csp6I GTAC 5 cut(s) 268, 274, 337, 491, 776
CviAII CATG 9 cut(s) 139, 530, 635, 848, 1020, 1228, 1355, 1615, 1795
CviQI GTAC 5 cut(s) 268, 274, 337, 491, 776
DdeI CTNAG 8 cut(s) 735, 1105, 1364, 1913, 1940, 2013, 2075, 2142
DraI TTTAAA 2 cut(s) 49, 79
DraIII CACNNNGTG 1 cut(s) 142
Eam1104I CTCTTC 5 cut(s) 1074, 1703, 1763, 1831, 1974
EarI CTCTTC 5 cut(s) 1074, 1703, 1763, 1831, 1974
EciI GGCGGA 3 cut(s) 1229, 1334, 1625
Ecl136II GAGCTC 1 cut(s) 220
Eco130I CCWWGG 2 cut(s) 170, 1113
Eco24I GRGCYC 1 cut(s) 222
Eco47I GGWCC 2 cut(s) 1153, 1630
Eco53kI GAGCTC 1 cut(s) 220
Eco57I CTGAAG 9 cut(s) 692, 704, 917, 1068, 1098, 1191, 1727, 1998, 2023
EcoICRI GAGCTC 1 cut(s) 220
EcoNI CCTNNNNNAGG 1 cut(s) 262
EcoO109I RGGNCCY 1 cut(s) 1630
EcoRII CCWGG 8 cut(s) 344, 457, 502, 592, 717, 1155, 1257, 1278
EcoT14I CCWWGG 2 cut(s) 170, 1113
EcoT22I ATGCAT 2 cut(s) 853, 1849
EcoT38I GRGCYC 1 cut(s) 222
ErhI CCWWGG 2 cut(s) 170, 1113
Esp3I CGTCTC 1 cut(s) 1351
FaeI CATG 9 cut(s) 142, 533, 638, 851, 1023, 1231, 1358, 1618, 1798
FalI AAGNNNNNCTT 8 cut(s) 814, 846, 1071, 1103, 1130, 1162, 1224, 1256
FatI CATG 9 cut(s) 138, 529, 634, 847, 1019, 1227, 1354, 1614, 1794
FauNDI CATATG 1 cut(s) 1843
FbaI TGATCA 1 cut(s) 3
FblI GTMKAC 1 cut(s) 307
Fnu4HI GCNGC 1 cut(s) 408
FokI GGATG 9 cut(s) 265, 362, 490, 575, 701, 734, 975, 1130, 1334
FriOI GRGCYC 1 cut(s) 222
Fsp4HI GCNGC 1 cut(s) 408
FspBI CTAG 7 cut(s) 110, 1284, 1373, 1562, 1721, 2084, 2112
GlaI GCGC 1 cut(s) 953
GluI GCNGC 1 cut(s) 408
GsaI CCCAGC 2 cut(s) 1190, 1354
GsuI CTGGAG 2 cut(s) 615, 1241
HaeII RGCGCY 1 cut(s) 955
HaeIII GGCC 1 cut(s) 441
HapII CCGG 2 cut(s) 125, 898
HgaI GACGC 2 cut(s) 558, 1118
HhaI GCGC 1 cut(s) 954
Hin1I GRCGYC 2 cut(s) 569, 1110
Hin1II CATG 9 cut(s) 142, 533, 638, 851, 1023, 1231, 1358, 1618, 1798
Hin6I GCGC 1 cut(s) 952
HinP1I GCGC 1 cut(s) 952
HindIII AAGCTT 3 cut(s) 471, 1812, 2144
HpaII CCGG 2 cut(s) 125, 898
HphI GGTGA 6 cut(s) 139, 385, 811, 1919, 1939, 2081
Hpy166II GTNNAC 7 cut(s) 308, 337, 339, 776, 968, 1337, 2072
Hpy188III TCNNGA 9 cut(s) 61, 262, 635, 752, 807, 1169, 1996, 2084, 2112
Hpy8I GTNNAC 7 cut(s) 308, 337, 339, 776, 968, 1337, 2072
HpyCH4III ACNGT 7 cut(s) 226, 514, 780, 1334, 1689, 1764, 1955
HpyF10VI GCNNNNNNNGC 2 cut(s) 1261, 1360
HpyF3I CTNAG 8 cut(s) 735, 1105, 1364, 1913, 1940, 2013, 2075, 2142
Hsp92I GRCGYC 2 cut(s) 569, 1110
Hsp92II CATG 9 cut(s) 142, 533, 638, 851, 1023, 1231, 1358, 1618, 1798
HspAI GCGC 1 cut(s) 952
Ksp22I TGATCA 1 cut(s) 3
LguI GCTCTTC 1 cut(s) 1074
LmnI GCTCC 3 cut(s) 595, 1260, 1261
Lsp1109I GCAGC 1 cut(s) 419
LweI GCATC 8 cut(s) 105, 222, 243, 801, 856, 1477, 1812, 2052
MaeI CTAG 7 cut(s) 110, 1284, 1373, 1562, 1721, 2084, 2112
MaeIII GTNAC 8 cut(s) 318, 506, 799, 1294, 1639, 1673, 1886, 1955
MflI RGATCY 7 cut(s) 115, 163, 809, 992, 1369, 1396, 1782
MhlI GDGCHC 2 cut(s) 222, 236
MlyI GAGTC 4 cut(s) 81, 746, 1025, 1477
MmeI TCCRAC 1 cut(s) 967
Mph1103I ATGCAT 2 cut(s) 853, 1849
MroXI GAANNNNTTC 2 cut(s) 1083, 1236
MseI TTAA 8 cut(s) 48, 78, 191, 761, 978, 1026, 1034, 2148
MslI CAYNNNNRTG 5 cut(s) 530, 797, 864, 980, 1428
MspA1I CMGCKG 4 cut(s) 410, 666, 1190, 1664
MspCI CTTAAG 1 cut(s) 2147
MspI CCGG 2 cut(s) 125, 898
MspR9I CCNGG 9 cut(s) 346, 459, 504, 594, 719, 899, 1157, 1259, 1280
Mva1269I GAATGC 1 cut(s) 1148
MvaI CCWGG 8 cut(s) 346, 459, 504, 594, 719, 1157, 1259, 1280
MvnI CGCG 1 cut(s) 1488
MwoI GCNNNNNNNGC 2 cut(s) 1261, 1360
NciI CCSGG 1 cut(s) 899
NdeI CATATG 1 cut(s) 1843
NlaIII CATG 9 cut(s) 142, 533, 638, 851, 1023, 1231, 1358, 1618, 1798
NmuCI GTSAC 5 cut(s) 799, 1294, 1639, 1886, 1955
NsiI ATGCAT 2 cut(s) 853, 1849
NspI RCATGY 2 cut(s) 533, 851
OliI CACNNNNGTG 2 cut(s) 530, 1428
PagI TCATGA 1 cut(s) 634
PciSI GCTCTTC 1 cut(s) 1074
PctI GAATGC 1 cut(s) 1148
PdmI GAANNNNTTC 2 cut(s) 1083, 1236
PfeI GAWTC 8 cut(s) 130, 464, 856, 1182, 1537, 1713, 1753, 1936
PfoI TCCNGGA 3 cut(s) 592, 717, 1257
PkrI GCNGC 1 cut(s) 409
PleI GAGTC 4 cut(s) 81, 745, 1024, 1477
PpsI GAGTC 4 cut(s) 81, 745, 1024, 1477
PpuMI RGGWCCY 1 cut(s) 1630
Psp124BI GAGCTC 1 cut(s) 222
Psp5II RGGWCCY 1 cut(s) 1630
Psp6I CCWGG 8 cut(s) 344, 457, 502, 592, 717, 1155, 1257, 1278
PspFI CCCAGC 2 cut(s) 1186, 1350
PspGI CCWGG 8 cut(s) 344, 457, 502, 592, 717, 1155, 1257, 1278
PspPI GGNCC 3 cut(s) 439, 1153, 1630
PspPPI RGGWCCY 1 cut(s) 1630
PsrI GAACNNNNNNTAC 2 cut(s) 759, 791
PstI CTGCAG 1 cut(s) 430
PstNI CAGNNNCTG 1 cut(s) 593
PsuI RGATCY 7 cut(s) 115, 163, 809, 992, 1369, 1396, 1782
PvuII CAGCTG 3 cut(s) 666, 1190, 1664
RsaI GTAC 5 cut(s) 269, 275, 338, 492, 777
RsaNI GTAC 5 cut(s) 268, 274, 337, 491, 776
RseI CAYNNNNRTG 5 cut(s) 530, 797, 864, 980, 1428
SacI GAGCTC 1 cut(s) 222
SapI GCTCTTC 1 cut(s) 1074
SaqAI TTAA 8 cut(s) 48, 78, 191, 761, 978, 1026, 1034, 2148
SatI GCNGC 1 cut(s) 408
Sau96I GGNCC 3 cut(s) 439, 1153, 1630
SchI GAGTC 4 cut(s) 81, 746, 1025, 1477
ScrFI CCNGG 9 cut(s) 346, 459, 504, 594, 719, 899, 1157, 1259, 1280
SduI GDGCHC 2 cut(s) 222, 236
SfaNI GCATC 8 cut(s) 105, 222, 243, 801, 856, 1477, 1812, 2052
SfcI CTRYAG 4 cut(s) 426, 483, 1330, 1859
SinI GGWCC 2 cut(s) 1153, 1630
SmiMI CAYNNNNRTG 5 cut(s) 530, 797, 864, 980, 1428
SmlI CTYRAG 2 cut(s) 752, 2147
SmoI CTYRAG 2 cut(s) 752, 2147
SsiI CCGC 6 cut(s) 342, 363, 410, 1214, 1319, 1610
SspI AATATT 1 cut(s) 70
SspMI CTAG 7 cut(s) 110, 1284, 1373, 1562, 1721, 2084, 2112
SstI GAGCTC 1 cut(s) 222
StyD4I CCNGG 9 cut(s) 344, 457, 502, 592, 717, 897, 1155, 1257, 1278
StyI CCWWGG 2 cut(s) 170, 1113
TaaI ACNGT 7 cut(s) 226, 514, 780, 1334, 1689, 1764, 1955
TaqI TCGA 4 cut(s) 99, 133, 216, 2022
TaqII GACCGA 1 cut(s) 1796
TatI WGTACW 2 cut(s) 336, 775
TfiI GAWTC 8 cut(s) 130, 464, 856, 1182, 1537, 1713, 1753, 1936
Tru1I TTAA 8 cut(s) 48, 78, 191, 761, 978, 1026, 1034, 2148
Tru9I TTAA 8 cut(s) 48, 78, 191, 761, 978, 1026, 1034, 2148
TscAI CASTG 8 cut(s) 18, 34, 229, 661, 1339, 1891, 1921, 1958
TseFI GTSAC 5 cut(s) 799, 1294, 1639, 1886, 1955
TseI GCWGC 1 cut(s) 407
Tsp45I GTSAC 5 cut(s) 799, 1294, 1639, 1886, 1955
TspDTI ATGAA 8 cut(s) 218, 563, 780, 804, 1134, 1732, 1783, 1830
TspRI CASTG 8 cut(s) 18, 34, 229, 661, 1339, 1891, 1921, 1958
Vha464I CTTAAG 1 cut(s) 2147
VpaK11BI GGWCC 2 cut(s) 1153, 1630
XagI CCTNNNNNAGG 1 cut(s) 262
XapI RAATTY 7 cut(s) 74, 677, 784, 1007, 1570, 1728, 1836
XbaI TCTAGA 2 cut(s) 2083, 2111
XceI RCATGY 2 cut(s) 533, 851
XcmI CCANNNNNNNNNTGG 1 cut(s) 1276
XmiI GTMKAC 1 cut(s) 307
XmnI GAANNNNTTC 2 cut(s) 1083, 1236
XspI CTAG 7 cut(s) 110, 1284, 1373, 1562, 1721, 2084, 2112
Zsp2I ATGCAT 2 cut(s) 853, 1849
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.