Prupe.7G138900_v2.0.a1

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0000039
Physical Location & Seq
Reverse (-)
15510691 .. 15514256
3566 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G138900.1

Sequence Viewer

Length: 2451 bp
ATGGCATTTGCTGCGGTAGGAGGAGCTGGTCTAGGAGCGGTATTTGGAGCGCTGCTTGATGGCGTTATAGCAGTGACGTCAGAGGCTACAATGTTTGAAACCCACCTCAGAGATCTCAAATGCACCCTAGACTTGTTTCAACAAGTGGATGAAGATGTAAGGCAACATCCCAACATATTGTTTCGCCCAATGCAGGGCCTAGAAAGGTTTGAAATACAAATGGAGAAGGGTGTTCAGCTCGTTGAAAAGTGCTCCAAGGTTTGTCCATGGAAGCCGAACGTGTTCAATAAGCGGTACACCAGAAAACTTATTGCATTGGATACATCTCTTAGAACACTGTTAAGTGTACTGACAGCGCACATAGCAAGTGACCTGAGGGCTCGGGTTATCAATGTGGCGACAGTGGTGAACCATATCGATGCGAATATTGCGGCACAAAACCAAAATGTAAATCAAATTAAAGGTTGGTCTGCAATACCTGAGCCTCCACCCTTTACAGTTGGATTGGATGTGCATGTGGAGGAGTTGAAGTTGGAGCTTCTTAAGGACGAGGCATCAATGCTTGTGCTGACTGGTCTTGGAGGATGCGGGAAAACCACACTGGCACAAAAGGTTTGCGAAGATCAGAAAGTCAAAGAGAAATTCAGGAGCAATATCTTCTTTGTCGTTGTTTCAAAGAGAACCAACTGCCTTGTTGTACAAGAACTGTGTCAAAAAAGGGGATCCCTGGTACCTGCTCTCCAAGAGGAAGCAATTGCCTTTAACTGGCTGCAAGAATTTCTGAAGAAAACAGGACAGGATCCTCTACTTTTGGTCCTGGATGATGTATGGCTAGGATCAGAATCCCTTCTTGATAAGTTTGGTCAATTCAAAAGGCCAAATTACAACATATTGGTGACATCAAGATTTCAATTTCCAAGATTTGGCCCTGCATATCCGTTAGGAACATTGGAACAAGGAGATGCAATGACTCTTTTTCGTCATGCAGCATCCCGACCAGATAGGAGCTTTGATATTCCGGAAGATCTAGCGAAACAGATAGTTCAGCTCTGTAAGGGATTTCCACTTGCCATTACAACGATCGGAAGATCAGTTTGCGAACGGCCAACAGAGATCTGGAAGAAAAGAGTAGCGGAATTGTCTAGAGGTTCTTCAATTCTTGATTCTGAGGATTATTTGTTTGCTTGCCTCAAAAGTAGCTTAGATGCCTTGGATGAACGGTTGGCTGTCATCAAGGAATGCTTCATTGATCTTGCTTCATTTCCTGAAGACAGATGTATCCCTGCTGTTGCTCTCATTGATATGTGGGCAGAGTTATATGGGCTAGATGAGGACTTTTGGTCCATTGCACACATCCACGAGCTAACCAATCGTAATTTGGCCAATCTAGTTTCAAGGAATGGGAAGATGGAGATGGATGGCTATTACAGTGAACACTTTGTTACCCAGCATGACATGCTTAGAAATCTTGCTATCCATCAGACTGGTCAAGATGAAATTGGACAGGAGAAAAGGCTGATTATAGAAATTTGTGGTGACAATCTCCCTAATGGGTGGACAGAACAGAAGGATAAACCCAAAAAGACCCGGTTATTGTCTATCTCAACTGATGGATTGTCCTCAGCAAAATGGCACGACATGCATCTACCAAAAGCTGAGGTTCTAGTTCTGAATTTTCAGACAGAGAACTATGTTCTGCCCAAGTTTGTGAAGAAAATGTCCAAGTTGAAGGTTCTAATAGTCACAAATTGTGGTGTCTTACAAGCTGACTTGAGTAATTTCAAGCTTTTGGGTTCTTTGGCTAATCTGAAGAGAATAAGATTGGAGCGCATTTCAATTCCTTCCATAAGCAAGAACTCCATGCAGTTGAAGAGTCTGCAGAAGATATCTTTATTCATGTGCAGCATCGGTCAAGCTTTTAGCAACTCTTCCATCCAAATCTTAGAGGCATTTCCAAATCTAGTGGAAATGAACATCGACTATTGCAATGATTTGGTGGAATTGCCTGCCAAGCTCTGTGATCTTATCCGCCTAAAGAAGCTCAGTATTACCAATTGTCATAAGCTATCTGCCTTGCCTAAAGAGATTGGAAAGCTGGTCAATTTGGAGGTATTAAGGCTAAGGTCCTCCACAGAGTTGGAAAGGCTTCCAGGCTCGATTAAGAACCTAAACAAGTTAAGCTTTCTTGACATATATAATTGTTCGAGCATTAAGAAGCTGCCTGAAGAGATTGGTGAAATGAGTAGTTTAAGAAAGATCAACATGGGACAATGCTCAAGACTGCAAGGGTTGCCTCAATCAGTTTTGAATCTTGGGGAGTTACGGGAACTGATATGTGATGAAGAGACAGAAAACTTATGGGGGGAGCCTTTCAAATCCAGTCTCATAAACATAAACATAACAGTGGCAAAAGAACAACACAACCTTAATTGGCTCTACTGCAAGCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
NB-ARC RPW8

Protein Analysis

817

Amino Acids

91.94

Weight (kDa)

7.18

Isoelectric Point (pI)

44.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 80
Acc36I ACCTGC 1 cut(s) 742
Acc65I GGTACC 1 cut(s) 730
AccB1I GGYRCC 1 cut(s) 730
AccB7I CCANNNNNTGG 1 cut(s) 923
AccBSI CCGCTC 1 cut(s) 38
AccIII TCCGGA 1 cut(s) 1018
AciI CCGC 7 cut(s) 14, 38, 292, 431, 588, 1133, 2029
AclWI GGATC 5 cut(s) 717, 730, 794, 807, 844
AcoI YGGCCR 2 cut(s) 1103, 1380
AcsI RAATTY 4 cut(s) 641, 776, 1527, 1672
AcuI CTGAAG 4 cut(s) 803, 1287, 1829, 2244
AcyI GRCGYC 1 cut(s) 77
AfaI GTAC 4 cut(s) 296, 348, 699, 732
AfeI AGCGCT 1 cut(s) 51
AfiI CCNNNNNNNGG 4 cut(s) 193, 194, 765, 923
AflII CTTAAG 1 cut(s) 542
AflIII ACRYGT 1 cut(s) 279
AhdI GACNNNNNGTC 1 cut(s) 1339
AjnI CCWGG 3 cut(s) 726, 816, 2149
Alw21I GWGCWC 1 cut(s) 254
Alw26I GTCTC 2 cut(s) 2339, 2387
AlwI GGATC 5 cut(s) 717, 730, 794, 807, 844
Ama87I CYCGRG 1 cut(s) 381
Aor13HI TCCGGA 1 cut(s) 1018
Aor51HI AGCGCT 1 cut(s) 51
AoxI GGCC 5 cut(s) 196, 875, 925, 1103, 1380
ApeKI GCWGC 6 cut(s) 11, 52, 769, 986, 1902, 2218
ApoI RAATTY 4 cut(s) 641, 776, 1527, 1672
Asp700I GAANNNNTTC 3 cut(s) 281, 846, 2145
Asp718I GGTACC 1 cut(s) 730
AspLEI GCGC 3 cut(s) 52, 358, 1830
AspS9I GGNCC 5 cut(s) 196, 814, 926, 1341, 2124
AsuC2I CCSGG 1 cut(s) 1588
AsuHPI GGTGA 4 cut(s) 418, 907, 1547, 2246
AvaI CYCGRG 1 cut(s) 381
AvaII GGWCC 3 cut(s) 814, 1341, 2124
AxyI CCTNAGG 1 cut(s) 374
BaeI ACNNNNGTAYC 2 cut(s) 1261, 1294
BalI TGGCCA 1 cut(s) 1382
BamHI GGATCC 2 cut(s) 722, 799
BanI GGYRCC 1 cut(s) 730
BanII GRGCYC 1 cut(s) 382
BauI CACGAG 1 cut(s) 1358
BbsI GAAGAC 1 cut(s) 1275
Bbv12I GWGCWC 1 cut(s) 254
BbvCI CCTCAGC 2 cut(s) 1621, 1656
BbvI GCAGC 5 cut(s) 39, 756, 998, 1914, 2205
BccI CCATC 7 cut(s) 53, 1402, 1408, 1412, 1485, 1604, 1940
BceAI ACGGC 1 cut(s) 1118
BciT130I CCWGG 3 cut(s) 728, 818, 2151
BciVI GTATCC 2 cut(s) 313, 1289
BcnI CCSGG 1 cut(s) 1588
BcoDI GTCTC 2 cut(s) 2339, 2387
BfmI CTRYAG 1 cut(s) 1877
BfoI RGCGCY 1 cut(s) 53
BfrI CTTAAG 1 cut(s) 542
BfuAI ACCTGC 1 cut(s) 742
BfuI GTATCC 2 cut(s) 313, 1289
BglII AGATCT 3 cut(s) 112, 1024, 1113
BisI GCNGC 7 cut(s) 12, 53, 432, 770, 987, 1903, 2219
BlsI GCNGC 7 cut(s) 13, 54, 433, 771, 988, 1904, 2220
Bme1390I CCNGG 4 cut(s) 728, 818, 1588, 2151
Bme18I GGWCC 3 cut(s) 814, 1341, 2124
BmeRI GACNNNNNGTC 1 cut(s) 1339
BmeT110I CYCGRG 1 cut(s) 381
BmgT120I GGNCC 5 cut(s) 196, 814, 926, 1341, 2124
BmiI GGNNCC 4 cut(s) 724, 732, 801, 2367
BmrFI CCNGG 4 cut(s) 728, 818, 1588, 2151
BmsI GCATC 8 cut(s) 409, 563, 575, 952, 998, 1195, 1651, 1914
BpiI GAAGAC 1 cut(s) 1275
Bpu10I CCTNAGC 4 cut(s) 480, 1621, 1656, 2120
BpuEI CTTGAG 2 cut(s) 1792, 2260
BpuMI CCSGG 1 cut(s) 1588
Bsa29I ATCGAT 1 cut(s) 417
BsaBI GATNNNNATC 1 cut(s) 841
BsaHI GRCGYC 1 cut(s) 77
BsaJI CCNNGG 4 cut(s) 255, 266, 726, 1209
BsaWI WCCGGW 1 cut(s) 1018
BsaXI ACNNNNNCTCC 4 cut(s) 515, 545, 723, 753
Bsc4I CCNNNNNNNGG 4 cut(s) 193, 194, 765, 923
Bse1I ACTGG 5 cut(s) 577, 606, 770, 1489, 2379
Bse21I CCTNAGG 1 cut(s) 374
Bse3DI GCAATG 3 cut(s) 972, 1344, 1993
Bse8I GATNNNNATC 1 cut(s) 841
BseAI TCCGGA 1 cut(s) 1018
BseBI CCWGG 3 cut(s) 728, 818, 2151
BseCI ATCGAT 1 cut(s) 417
BseDI CCNNGG 4 cut(s) 255, 266, 726, 1209
BseJI GATNNNNATC 1 cut(s) 841
BseLI CCNNNNNNNGG 4 cut(s) 193, 194, 765, 923
BseMI GCAATG 3 cut(s) 972, 1344, 1993
BseMII CTCAG 7 cut(s) 121, 365, 471, 1158, 1635, 1647, 2056
BseNI ACTGG 5 cut(s) 577, 606, 770, 1489, 2379
BseRI GAGGAG 2 cut(s) 36, 536
BseXI GCAGC 5 cut(s) 39, 756, 998, 1914, 2205
BseYI CCCAGC 1 cut(s) 1446
BsgI GTGCAG 1 cut(s) 1921
Bsh1285I CGRYCG 1 cut(s) 1083
BshFI GGCC 5 cut(s) 198, 877, 927, 1105, 1382
BshNI GGYRCC 1 cut(s) 730
BshVI ATCGAT 1 cut(s) 417
BsiEI CGRYCG 1 cut(s) 1083
BsiHKAI GWGCWC 1 cut(s) 254
BsiHKCI CYCGRG 1 cut(s) 381
BsiSI CCGG 2 cut(s) 1019, 1588
BslFI GGGAC 1 cut(s) 2280
BslI CCNNNNNNNGG 4 cut(s) 193, 194, 765, 923
BsmAI GTCTC 2 cut(s) 2339, 2387
BsmFI GGGAC 1 cut(s) 2280
BsmI GAATGC 1 cut(s) 1244
BsnI GGCC 5 cut(s) 198, 877, 927, 1105, 1382
BsoBI CYCGRG 1 cut(s) 381
Bsp1286I GDGCHC 2 cut(s) 254, 382
Bsp13I TCCGGA 1 cut(s) 1018
Bsp1407I TGTACA 1 cut(s) 697
Bsp19I CCATGG 1 cut(s) 266
BspACI CCGC 7 cut(s) 14, 38, 292, 431, 588, 1133, 2029
BspANI GGCC 5 cut(s) 198, 877, 927, 1105, 1382
BspCNI CTCAG 7 cut(s) 120, 366, 472, 1159, 1634, 1648, 2055
BspDI ATCGAT 1 cut(s) 417
BspEI TCCGGA 1 cut(s) 1018
BspLI GGNNCC 4 cut(s) 724, 732, 801, 2367
BspMAI CTGCAG 1 cut(s) 1881
BspMI ACCTGC 1 cut(s) 742
BspPI GGATC 5 cut(s) 717, 730, 794, 807, 844
BspT107I GGYRCC 1 cut(s) 730
BspTI CTTAAG 1 cut(s) 542
BsrBI CCGCTC 1 cut(s) 38
BsrDI GCAATG 3 cut(s) 972, 1344, 1993
BsrGI TGTACA 1 cut(s) 697
BsrI ACTGG 5 cut(s) 577, 606, 770, 1489, 2379
BssECI CCNNGG 4 cut(s) 255, 266, 726, 1209
BssNI GRCGYC 1 cut(s) 77
BssSI CACGAG 1 cut(s) 1358
BssT1I CCWWGG 3 cut(s) 255, 266, 1209
Bst2BI CACGAG 1 cut(s) 1358
Bst2UI CCWGG 3 cut(s) 728, 818, 2151
Bst4CI ACNGT 7 cut(s) 339, 403, 499, 708, 1221, 1430, 2404
Bst6I CTCTTC 5 cut(s) 1805, 1865, 1933, 2220, 2337
BstACI GRCGYC 1 cut(s) 77
BstAFI CTTAAG 1 cut(s) 542
BstAPI GCANNNNNTGC 4 cut(s) 11, 1456, 1639, 2290
BstAUI TGTACA 1 cut(s) 697
BstC8I GCNNGC 3 cut(s) 1186, 2007, 2444
BstDSI CCRYGG 1 cut(s) 266
BstH2I RGCGCY 1 cut(s) 53
BstHHI GCGC 3 cut(s) 52, 358, 1830
BstMAI GTCTC 2 cut(s) 2339, 2387
BstMCI CGRYCG 1 cut(s) 1083
BstMWI GCNNNNNNNGC 7 cut(s) 11, 362, 428, 1456, 1639, 2011, 2290
BstNI CCWGG 3 cut(s) 728, 818, 2151
BstNSI RCATGY 3 cut(s) 518, 1459, 1642
BstSCI CCNGG 4 cut(s) 726, 816, 1586, 2149
BstSFI CTRYAG 1 cut(s) 1877
BstV1I GCAGC 5 cut(s) 39, 756, 998, 1914, 2205
BstV2I GAAGAC 1 cut(s) 1275
BstX2I RGATCY 5 cut(s) 112, 722, 799, 1024, 1113
BstXI CCANNNNNNTGG 2 cut(s) 1484, 2137
BstYI RGATCY 5 cut(s) 112, 722, 799, 1024, 1113
Bsu15I ATCGAT 1 cut(s) 417
Bsu36I CCTNAGG 1 cut(s) 374
BsuI GTATCC 2 cut(s) 313, 1289
BsuRI GGCC 5 cut(s) 198, 877, 927, 1105, 1382
BsuTUI ATCGAT 1 cut(s) 417
BtgI CCRYGG 1 cut(s) 266
BtsI GCAGTG 1 cut(s) 78
BtsIMutI CAGTG 6 cut(s) 78, 335, 408, 599, 1435, 2409
BveI ACCTGC 1 cut(s) 742
Cac8I GCNNGC 3 cut(s) 1186, 2007, 2444
CfoI GCGC 3 cut(s) 52, 358, 1830
Cfr13I GGNCC 5 cut(s) 196, 814, 926, 1341, 2124
ClaI ATCGAT 1 cut(s) 417
Csp6I GTAC 4 cut(s) 295, 347, 698, 731
CspCI CAANNNNNGTGG 2 cut(s) 1944, 1979
CviAII CATG 9 cut(s) 267, 515, 983, 1451, 1456, 1639, 1861, 1897, 2263
CviQI GTAC 4 cut(s) 295, 347, 698, 731
DriI GACNNNNNGTC 1 cut(s) 1339
EaeI YGGCCR 2 cut(s) 1103, 1380
Eam1104I CTCTTC 5 cut(s) 1805, 1865, 1933, 2220, 2337
Eam1105I GACNNNNNGTC 1 cut(s) 1339
EarI CTCTTC 5 cut(s) 1805, 1865, 1933, 2220, 2337
EciI GGCGGA 1 cut(s) 2018
Eco130I CCWWGG 3 cut(s) 255, 266, 1209
Eco24I GRGCYC 1 cut(s) 382
Eco32I GATATC 1 cut(s) 1887
Eco47I GGWCC 3 cut(s) 814, 1341, 2124
Eco47III AGCGCT 1 cut(s) 51
Eco57I CTGAAG 4 cut(s) 803, 1287, 1829, 2244
Eco81I CCTNAGG 1 cut(s) 374
Eco88I CYCGRG 1 cut(s) 381
EcoO109I RGGNCCY 2 cut(s) 196, 2124
EcoRII CCWGG 3 cut(s) 726, 816, 2149
EcoRV GATATC 1 cut(s) 1887
EcoT14I CCWWGG 3 cut(s) 255, 266, 1209
EcoT22I ATGCAT 1 cut(s) 1644
EcoT38I GRGCYC 1 cut(s) 382
ErhI CCWWGG 3 cut(s) 255, 266, 1209
FaeI CATG 9 cut(s) 270, 518, 986, 1454, 1459, 1642, 1864, 1900, 2266
FalI AAGNNNNNCTT 4 cut(s) 1226, 1258, 2165, 2197
FaqI GGGAC 1 cut(s) 2280
FatI CATG 9 cut(s) 266, 514, 982, 1450, 1455, 1638, 1860, 1896, 2262
FauI CCCGC 1 cut(s) 581
Fnu4HI GCNGC 7 cut(s) 12, 53, 432, 770, 987, 1903, 2219
FriOI GRGCYC 1 cut(s) 382
Fsp4HI GCNGC 7 cut(s) 12, 53, 432, 770, 987, 1903, 2219
GlaI GCGC 3 cut(s) 51, 357, 1829
GluI GCNGC 7 cut(s) 12, 53, 432, 770, 987, 1903, 2219
GsaI CCCAGC 1 cut(s) 1450
HaeII RGCGCY 1 cut(s) 53
HaeIII GGCC 5 cut(s) 198, 877, 927, 1105, 1382
HapII CCGG 2 cut(s) 1019, 1588
HhaI GCGC 3 cut(s) 52, 358, 1830
Hin1I GRCGYC 1 cut(s) 77
Hin1II CATG 9 cut(s) 270, 518, 986, 1454, 1459, 1642, 1864, 1900, 2266
Hin6I GCGC 3 cut(s) 50, 356, 1828
HinP1I GCGC 3 cut(s) 50, 356, 1828
HindIII AAGCTT 3 cut(s) 1784, 1914, 2179
HinfI GANTC 5 cut(s) 842, 970, 1163, 1873, 2308
HpaII CCGG 2 cut(s) 1019, 1588
HphI GGTGA 4 cut(s) 418, 907, 1547, 2246
Hpy166II GTNNAC 5 cut(s) 297, 347, 409, 1433, 1557
Hpy8I GTNNAC 5 cut(s) 297, 347, 409, 1433, 1557
HpyAV CCTTC 5 cut(s) 220, 857, 1561, 1723, 1851
HpyCH4III ACNGT 7 cut(s) 339, 403, 499, 708, 1221, 1430, 2404
HpyCH4IV ACGT 2 cut(s) 77, 279
HpyF10VI GCNNNNNNNGC 7 cut(s) 11, 362, 428, 1456, 1639, 2011, 2290
HpySE526I ACGT 2 cut(s) 77, 279
Hsp92I GRCGYC 1 cut(s) 77
Hsp92II CATG 9 cut(s) 270, 518, 986, 1454, 1459, 1642, 1864, 1900, 2266
HspAI GCGC 3 cut(s) 50, 356, 1828
Kpn2I TCCGGA 1 cut(s) 1018
KpnI GGTACC 1 cut(s) 734
LmnI GCTCC 9 cut(s) 23, 35, 47, 257, 535, 648, 1005, 1825, 2365
Lsp1109I GCAGC 5 cut(s) 39, 756, 998, 1914, 2205
LweI GCATC 8 cut(s) 409, 563, 575, 952, 998, 1195, 1651, 1914
MaeII ACGT 2 cut(s) 77, 279
MaeIII GTNAC 7 cut(s) 73, 368, 895, 1441, 1535, 1741, 2319
MbiI CCGCTC 1 cut(s) 38
MfeI CAATTG 2 cut(s) 753, 2053
MflI RGATCY 5 cut(s) 112, 722, 799, 1024, 1113
MhlI GDGCHC 2 cut(s) 254, 382
MlsI TGGCCA 1 cut(s) 1382
MluNI TGGCCA 1 cut(s) 1382
MlyI GAGTC 2 cut(s) 964, 1882
MmeI TCCRAC 3 cut(s) 481, 513, 2118
Mox20I TGGCCA 1 cut(s) 1382
Mph1103I ATGCAT 1 cut(s) 1644
MroI TCCGGA 1 cut(s) 1018
MroXI GAANNNNTTC 3 cut(s) 281, 846, 2145
MscI TGGCCA 1 cut(s) 1382
MslI CAYNNNNRTG 4 cut(s) 417, 893, 1301, 2402
Msp20I TGGCCA 1 cut(s) 1382
MspCI CTTAAG 1 cut(s) 542
MspI CCGG 2 cut(s) 1019, 1588
MspR9I CCNGG 4 cut(s) 728, 818, 1588, 2151
MunI CAATTG 2 cut(s) 753, 2053
Mva1269I GAATGC 1 cut(s) 1244
MvaI CCWGG 3 cut(s) 728, 818, 2151
MwoI GCNNNNNNNGC 7 cut(s) 11, 362, 428, 1456, 1639, 2011, 2290
NciI CCSGG 1 cut(s) 1588
NcoI CCATGG 1 cut(s) 266
NlaIII CATG 9 cut(s) 270, 518, 986, 1454, 1459, 1642, 1864, 1900, 2266
NlaIV GGNNCC 4 cut(s) 724, 732, 801, 2367
NmuCI GTSAC 5 cut(s) 73, 368, 895, 1535, 1741
NsiI ATGCAT 1 cut(s) 1644
NspI RCATGY 3 cut(s) 518, 1459, 1642
PctI GAATGC 1 cut(s) 1244
PdmI GAANNNNTTC 3 cut(s) 281, 846, 2145
PfeI GAWTC 3 cut(s) 842, 1163, 2308
PflMI CCANNNNNTGG 1 cut(s) 923
PfoI TCCNGGA 1 cut(s) 816
PkrI GCNGC 7 cut(s) 13, 54, 433, 771, 988, 1904, 2220
Ple19I CGATCG 1 cut(s) 1083
PleI GAGTC 2 cut(s) 964, 1881
PpsI GAGTC 2 cut(s) 964, 1881
PpuMI RGGWCCY 1 cut(s) 2124
Psp5II RGGWCCY 1 cut(s) 2124
Psp6I CCWGG 3 cut(s) 726, 816, 2149
PspFI CCCAGC 1 cut(s) 1446
PspGI CCWGG 3 cut(s) 726, 816, 2149
PspN4I GGNNCC 4 cut(s) 724, 732, 801, 2367
PspPI GGNCC 5 cut(s) 196, 814, 926, 1341, 2124
PspPPI RGGWCCY 1 cut(s) 2124
PstI CTGCAG 1 cut(s) 1881
PsuI RGATCY 5 cut(s) 112, 722, 799, 1024, 1113
PvuI CGATCG 1 cut(s) 1083
RsaI GTAC 4 cut(s) 296, 348, 699, 732
RsaNI GTAC 4 cut(s) 295, 347, 698, 731
RseI CAYNNNNRTG 4 cut(s) 417, 893, 1301, 2402
SatI GCNGC 7 cut(s) 12, 53, 432, 770, 987, 1903, 2219
Sau96I GGNCC 5 cut(s) 196, 814, 926, 1341, 2124
SchI GAGTC 2 cut(s) 964, 1882
ScrFI CCNGG 4 cut(s) 728, 818, 1588, 2151
SduI GDGCHC 2 cut(s) 254, 382
SfaNI GCATC 8 cut(s) 409, 563, 575, 952, 998, 1195, 1651, 1914
SfcI CTRYAG 1 cut(s) 1877
SinI GGWCC 3 cut(s) 814, 1341, 2124
SmiMI CAYNNNNRTG 4 cut(s) 417, 893, 1301, 2402
SmlI CTYRAG 3 cut(s) 542, 1771, 2275
SmoI CTYRAG 3 cut(s) 542, 1771, 2275
SsiI CCGC 7 cut(s) 14, 38, 292, 431, 588, 1133, 2029
SspI AATATT 1 cut(s) 427
StyD4I CCNGG 4 cut(s) 726, 816, 1586, 2149
StyI CCWWGG 3 cut(s) 255, 266, 1209
TaaI ACNGT 7 cut(s) 339, 403, 499, 708, 1221, 1430, 2404
TaiI ACGT 2 cut(s) 80, 282
TaqI TCGA 4 cut(s) 417, 1977, 2156, 2204
TaqII GACCGA 1 cut(s) 1898
TatI WGTACW 2 cut(s) 346, 697
TauI GCSGC 1 cut(s) 434
TfiI GAWTC 3 cut(s) 842, 1163, 2308
TscAI CASTG 6 cut(s) 78, 342, 408, 606, 1435, 2409
TseFI GTSAC 5 cut(s) 73, 368, 895, 1535, 1741
TseI GCWGC 6 cut(s) 11, 52, 769, 986, 1902, 2218
Tsp45I GTSAC 5 cut(s) 73, 368, 895, 1535, 1741
TspDTI ATGAA 8 cut(s) 165, 1230, 1234, 1248, 1509, 1885, 1985, 2355
TspGWI ACGGA 1 cut(s) 927
TspRI CASTG 6 cut(s) 78, 342, 408, 606, 1435, 2409
Van91I CCANNNNNTGG 1 cut(s) 923
Vha464I CTTAAG 1 cut(s) 542
VpaK11BI GGWCC 3 cut(s) 814, 1341, 2124
XapI RAATTY 4 cut(s) 641, 776, 1527, 1672
XbaI TCTAGA 1 cut(s) 1142
XceI RCATGY 3 cut(s) 518, 1459, 1642
XcmI CCANNNNNNNNNTGG 2 cut(s) 1113, 1375
XmnI GAANNNNTTC 3 cut(s) 281, 846, 2145
ZraI GACGTC 1 cut(s) 78
Zsp2I ATGCAT 1 cut(s) 1644
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.