disease resistance
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RPW8 | PF05659 | 5 - 111 | 2.9e-15 | Arabidopsis broad-spectrum mildew resistance protein RPW8 |
| NB-ARC | PF00931 | 151 - 278 | 3.4e-13 | NB-ARC domain |
| AAA_22 | PF13401 | 158 - 249 | 6.7e-07 | AAA domain |
| DUF7885 | PF25372 | 658 - 718 | 7.9e-06 | Leucine Rich Repeat Domain of unknown function (DUF7885) |
| LRR_14 | PF23598 | 676 - 758 | 1.8e-08 | Leucine-rich repeat region |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 66 |
| Acc36I | ACCTGC | 1 cut(s) | 1717 |
| AciI | CCGC | 2 cut(s) | 206, 510 |
| AclWI | GGATC | 2 cut(s) | 313, 2274 |
| AcoI | YGGCCR | 1 cut(s) | 207 |
| AcsI | RAATTY | 3 cut(s) | 381, 1649, 2218 |
| AcuI | CTGAAG | 2 cut(s) | 1775, 1994 |
| AcyI | GRCGYC | 1 cut(s) | 63 |
| AfaI | GTAC | 7 cut(s) | 157, 260, 269, 275, 963, 1325, 2071 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 547, 607, 640, 918, 1652 |
| AgsI | TTSAA | 9 cut(s) | 224, 451, 796, 874, 954, 1181, 1556, 1585, 1782 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 506, 538, 835, 867 |
| AleI | CACNNNNGTG | 2 cut(s) | 1398, 1400 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 615, 647 |
| Alw21I | GWGCWC | 1 cut(s) | 307 |
| Alw26I | GTCTC | 1 cut(s) | 2200 |
| AlwI | GGATC | 2 cut(s) | 313, 2274 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1956 |
| Ama87I | CYCGRG | 1 cut(s) | 965 |
| AoxI | GGCC | 3 cut(s) | 207, 1119, 2276 |
| ApeKI | GCWGC | 6 cut(s) | 8, 29, 1110, 1199, 1202, 2230 |
| ApoI | RAATTY | 3 cut(s) | 381, 1649, 2218 |
| AseI | ATTAAT | 1 cut(s) | 1190 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 575, 897, 1371 |
| AspLEI | GCGC | 1 cut(s) | 1776 |
| AspS9I | GGNCC | 4 cut(s) | 610, 733, 1405, 2277 |
| AsuHPI | GGTGA | 3 cut(s) | 832, 1264, 1493 |
| AvaI | CYCGRG | 1 cut(s) | 965 |
| AvaII | GGWCC | 3 cut(s) | 610, 733, 1405 |
| AxyI | CCTNAGG | 2 cut(s) | 1245, 2019 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 953, 986 |
| BanII | GRGCYC | 2 cut(s) | 241, 307 |
| Bbv12I | GWGCWC | 1 cut(s) | 307 |
| BbvCI | CCTCAGC | 1 cut(s) | 1569 |
| BbvI | GCAGC | 5 cut(s) | 16, 1122, 1186, 1189, 2217 |
| BccI | CCATC | 6 cut(s) | 460, 464, 750, 1458, 1691, 1880 |
| BceAI | ACGGC | 2 cut(s) | 355, 1813 |
| BclI | TGATCA | 2 cut(s) | 544, 1960 |
| BcoDI | GTCTC | 1 cut(s) | 2200 |
| BfaI | CTAG | 3 cut(s) | 1160, 1577, 1901 |
| BfmI | CTRYAG | 3 cut(s) | 119, 1339, 1459 |
| BfuAI | ACCTGC | 1 cut(s) | 1717 |
| BglII | AGATCT | 2 cut(s) | 313, 1035 |
| BisI | GCNGC | 7 cut(s) | 9, 30, 207, 1111, 1200, 1203, 2231 |
| BlsI | GCNGC | 7 cut(s) | 10, 31, 208, 1112, 1201, 1204, 2232 |
| BmcAI | AGTACT | 1 cut(s) | 157 |
| Bme18I | GGWCC | 3 cut(s) | 610, 733, 1405 |
| BmeT110I | CYCGRG | 1 cut(s) | 965 |
| BmgT120I | GGNCC | 4 cut(s) | 610, 733, 1405, 2277 |
| BmiI | GGNNCC | 3 cut(s) | 611, 1060, 1407 |
| BmrI | ACTGGG | 1 cut(s) | 616 |
| BmsI | GCATC | 7 cut(s) | 151, 156, 193, 497, 874, 1876, 2094 |
| BmuI | ACTGGG | 1 cut(s) | 616 |
| BpmI | CTGGAG | 1 cut(s) | 393 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1569 |
| BpuEI | CTTGAG | 2 cut(s) | 92, 1478 |
| Bsa29I | ATCGAT | 2 cut(s) | 790, 1186 |
| BsaAI | YACGTR | 1 cut(s) | 258 |
| BsaBI | GATNNNNATC | 2 cut(s) | 760, 2253 |
| BsaHI | GRCGYC | 1 cut(s) | 63 |
| BsaJI | CCNNGG | 1 cut(s) | 1122 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2218, 2248 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 547, 607, 640, 918, 1652 |
| Bse1I | ACTGG | 4 cut(s) | 256, 432, 611, 1398 |
| Bse21I | CCTNAGG | 2 cut(s) | 1245, 2019 |
| Bse3DI | GCAATG | 2 cut(s) | 1260, 1933 |
| Bse8I | GATNNNNATC | 2 cut(s) | 760, 2253 |
| BseCI | ATCGAT | 2 cut(s) | 790, 1186 |
| BseDI | CCNNGG | 1 cut(s) | 1122 |
| BseGI | GGATG | 6 cut(s) | 208, 471, 475, 512, 761, 1872 |
| BseJI | GATNNNNATC | 2 cut(s) | 760, 2253 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 547, 607, 640, 918, 1652 |
| BseMI | GCAATG | 2 cut(s) | 1260, 1933 |
| BseMII | CTCAG | 4 cut(s) | 348, 1236, 1560, 2010 |
| BseNI | ACTGG | 4 cut(s) | 256, 432, 611, 1398 |
| BseRI | GAGGAG | 4 cut(s) | 127, 940, 2036, 2063 |
| BseXI | GCAGC | 5 cut(s) | 16, 1122, 1186, 1189, 2217 |
| BsgI | GTGCAG | 2 cut(s) | 1188, 1643 |
| BshFI | GGCC | 3 cut(s) | 209, 1121, 2278 |
| BshVI | ATCGAT | 2 cut(s) | 790, 1186 |
| BsiHKAI | GWGCWC | 1 cut(s) | 307 |
| BsiHKCI | CYCGRG | 1 cut(s) | 965 |
| BsiSI | CCGG | 2 cut(s) | 500, 2143 |
| BslFI | GGGAC | 3 cut(s) | 623, 662, 1391 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 547, 607, 640, 918, 1652 |
| BsmAI | GTCTC | 1 cut(s) | 2200 |
| BsmFI | GGGAC | 3 cut(s) | 623, 662, 1391 |
| BsmI | GAATGC | 1 cut(s) | 1529 |
| BsnI | GGCC | 3 cut(s) | 209, 1121, 2278 |
| BsoBI | CYCGRG | 1 cut(s) | 965 |
| Bsp1286I | GDGCHC | 2 cut(s) | 241, 307 |
| Bsp1407I | TGTACA | 2 cut(s) | 267, 2069 |
| BspACI | CCGC | 2 cut(s) | 206, 510 |
| BspANI | GGCC | 3 cut(s) | 209, 1121, 2278 |
| BspCNI | CTCAG | 4 cut(s) | 349, 1237, 1561, 2011 |
| BspDI | ATCGAT | 2 cut(s) | 790, 1186 |
| BspHI | TCATGA | 1 cut(s) | 2202 |
| BspLI | GGNNCC | 3 cut(s) | 611, 1060, 1407 |
| BspMAI | CTGCAG | 1 cut(s) | 1463 |
| BspMI | ACCTGC | 1 cut(s) | 1717 |
| BspPI | GGATC | 2 cut(s) | 313, 2274 |
| BsrDI | GCAATG | 2 cut(s) | 1260, 1933 |
| BsrGI | TGTACA | 2 cut(s) | 267, 2069 |
| BsrI | ACTGG | 4 cut(s) | 256, 432, 611, 1398 |
| BssECI | CCNNGG | 1 cut(s) | 1122 |
| BssNI | GRCGYC | 1 cut(s) | 63 |
| BssT1I | CCWWGG | 1 cut(s) | 1122 |
| Bst4CI | ACNGT | 8 cut(s) | 123, 421, 589, 614, 987, 1000, 1253, 1343 |
| Bst6I | CTCTTC | 2 cut(s) | 635, 1751 |
| BstACI | GRCGYC | 1 cut(s) | 63 |
| BstAUI | TGTACA | 2 cut(s) | 267, 2069 |
| BstBAI | YACGTR | 1 cut(s) | 258 |
| BstC8I | GCNNGC | 4 cut(s) | 708, 1383, 1947, 1951 |
| BstDEI | CTNAG | 7 cut(s) | 357, 1245, 1569, 1801, 2019, 2044, 2260 |
| BstF5I | GGATG | 6 cut(s) | 208, 471, 475, 512, 761, 1872 |
| BstHHI | GCGC | 1 cut(s) | 1776 |
| BstMAI | GTCTC | 1 cut(s) | 2200 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1378, 2230 |
| BstSFI | CTRYAG | 3 cut(s) | 119, 1339, 1459 |
| BstV1I | GCAGC | 5 cut(s) | 16, 1122, 1186, 1189, 2217 |
| BstX2I | RGATCY | 3 cut(s) | 313, 1035, 2266 |
| BstYI | RGATCY | 3 cut(s) | 313, 1035, 2266 |
| Bsu15I | ATCGAT | 2 cut(s) | 790, 1186 |
| Bsu36I | CCTNAGG | 2 cut(s) | 1245, 2019 |
| BsuRI | GGCC | 3 cut(s) | 209, 1121, 2278 |
| BsuTUI | ATCGAT | 2 cut(s) | 790, 1186 |
| BtgZI | GCGATG | 1 cut(s) | 179 |
| BtsCI | GGATG | 6 cut(s) | 208, 471, 475, 512, 761, 1872 |
| BtsIMutI | CAGTG | 4 cut(s) | 585, 1005, 1348, 1405 |
| BveI | ACCTGC | 1 cut(s) | 1717 |
| Cac8I | GCNNGC | 4 cut(s) | 708, 1383, 1947, 1951 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1956 |
| CciI | TCATGA | 1 cut(s) | 2202 |
| CfoI | GCGC | 1 cut(s) | 1776 |
| Cfr13I | GGNCC | 4 cut(s) | 610, 733, 1405, 2277 |
| ClaI | ATCGAT | 2 cut(s) | 790, 1186 |
| Csp6I | GTAC | 7 cut(s) | 156, 259, 268, 274, 962, 1324, 2070 |
| CviAII | CATG | 4 cut(s) | 542, 1364, 1837, 2203 |
| CviQI | GTAC | 7 cut(s) | 156, 259, 268, 274, 962, 1324, 2070 |
| DdeI | CTNAG | 7 cut(s) | 357, 1245, 1569, 1801, 2019, 2044, 2260 |
| EaeI | YGGCCR | 1 cut(s) | 207 |
| Eam1104I | CTCTTC | 2 cut(s) | 635, 1751 |
| EarI | CTCTTC | 2 cut(s) | 635, 1751 |
| Ecl136II | GAGCTC | 1 cut(s) | 305 |
| Eco130I | CCWWGG | 1 cut(s) | 1122 |
| Eco147I | AGGCCT | 1 cut(s) | 1121 |
| Eco24I | GRGCYC | 2 cut(s) | 241, 307 |
| Eco47I | GGWCC | 3 cut(s) | 610, 733, 1405 |
| Eco53kI | GAGCTC | 1 cut(s) | 305 |
| Eco57I | CTGAAG | 2 cut(s) | 1775, 1994 |
| Eco81I | CCTNAGG | 2 cut(s) | 1245, 2019 |
| Eco88I | CYCGRG | 1 cut(s) | 965 |
| EcoICRI | GAGCTC | 1 cut(s) | 305 |
| EcoT14I | CCWWGG | 1 cut(s) | 1122 |
| EcoT22I | ATGCAT | 1 cut(s) | 1891 |
| EcoT38I | GRGCYC | 2 cut(s) | 241, 307 |
| ErhI | CCWWGG | 1 cut(s) | 1122 |
| FaeI | CATG | 4 cut(s) | 545, 1367, 1840, 2206 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 560, 592 |
| FaqI | GGGAC | 3 cut(s) | 623, 662, 1391 |
| FatI | CATG | 4 cut(s) | 541, 1363, 1836, 2202 |
| FauI | CCCGC | 1 cut(s) | 503 |
| FauNDI | CATATG | 3 cut(s) | 1442, 1693, 2001 |
| FbaI | TGATCA | 2 cut(s) | 544, 1960 |
| Fnu4HI | GCNGC | 7 cut(s) | 9, 30, 207, 1111, 1200, 1203, 2231 |
| FokI | GGATG | 6 cut(s) | 215, 478, 482, 519, 768, 1859 |
| FriOI | GRGCYC | 2 cut(s) | 241, 307 |
| Fsp4HI | GCNGC | 7 cut(s) | 9, 30, 207, 1111, 1200, 1203, 2231 |
| FspBI | CTAG | 3 cut(s) | 1160, 1577, 1901 |
| GlaI | GCGC | 1 cut(s) | 1775 |
| GluI | GCNGC | 7 cut(s) | 9, 30, 207, 1111, 1200, 1203, 2231 |
| GsuI | CTGGAG | 1 cut(s) | 393 |
| HaeIII | GGCC | 3 cut(s) | 209, 1121, 2278 |
| HapII | CCGG | 2 cut(s) | 500, 2143 |
| HhaI | GCGC | 1 cut(s) | 1776 |
| Hin1I | GRCGYC | 1 cut(s) | 63 |
| Hin1II | CATG | 4 cut(s) | 545, 1367, 1840, 2206 |
| Hin6I | GCGC | 1 cut(s) | 1774 |
| HinP1I | GCGC | 1 cut(s) | 1774 |
| HincII | GTYRAC | 2 cut(s) | 249, 1487 |
| HindII | GTYRAC | 2 cut(s) | 249, 1487 |
| HindIII | AAGCTT | 2 cut(s) | 455, 770 |
| HpaII | CCGG | 2 cut(s) | 500, 2143 |
| HphI | GGTGA | 3 cut(s) | 832, 1264, 1493 |
| Hpy166II | GTNNAC | 7 cut(s) | 249, 261, 395, 417, 1326, 1346, 1487 |
| Hpy8I | GTNNAC | 7 cut(s) | 249, 261, 395, 417, 1326, 1346, 1487 |
| Hpy99I | CGWCG | 1 cut(s) | 68 |
| HpyAV | CCTTC | 3 cut(s) | 64, 166, 732 |
| HpyCH4III | ACNGT | 8 cut(s) | 123, 421, 589, 614, 987, 1000, 1253, 1343 |
| HpyCH4IV | ACGT | 2 cut(s) | 63, 257 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1378, 2230 |
| HpyF3I | CTNAG | 7 cut(s) | 357, 1245, 1569, 1801, 2019, 2044, 2260 |
| HpySE526I | ACGT | 2 cut(s) | 63, 257 |
| Hsp92I | GRCGYC | 1 cut(s) | 63 |
| Hsp92II | CATG | 4 cut(s) | 545, 1367, 1840, 2206 |
| HspAI | GCGC | 1 cut(s) | 1774 |
| Ksp22I | TGATCA | 2 cut(s) | 544, 1960 |
| LmnI | GCTCC | 2 cut(s) | 502, 927 |
| Lsp1109I | GCAGC | 5 cut(s) | 16, 1122, 1186, 1189, 2217 |
| LweI | GCATC | 7 cut(s) | 151, 156, 193, 497, 874, 1876, 2094 |
| MaeI | CTAG | 3 cut(s) | 1160, 1577, 1901 |
| MaeII | ACGT | 2 cut(s) | 63, 257 |
| MaeIII | GTNAC | 7 cut(s) | 583, 820, 1048, 1354, 1687, 1700, 1721 |
| MfeI | CAATTG | 1 cut(s) | 350 |
| MflI | RGATCY | 3 cut(s) | 313, 1035, 2266 |
| MhlI | GDGCHC | 2 cut(s) | 241, 307 |
| MlyI | GAGTC | 5 cut(s) | 46, 186, 485, 1095, 1285 |
| MmeI | TCCRAC | 5 cut(s) | 403, 658, 985, 2097, 2261 |
| Mph1103I | ATGCAT | 1 cut(s) | 1891 |
| MroXI | GAANNNNTTC | 3 cut(s) | 575, 897, 1371 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1214, 1398, 1400 |
| MspI | CCGG | 2 cut(s) | 500, 2143 |
| MunI | CAATTG | 1 cut(s) | 350 |
| Mva1269I | GAATGC | 1 cut(s) | 1529 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1378, 2230 |
| NdeI | CATATG | 3 cut(s) | 1442, 1693, 2001 |
| NlaIII | CATG | 4 cut(s) | 545, 1367, 1840, 2206 |
| NlaIV | GGNNCC | 3 cut(s) | 611, 1060, 1407 |
| NmeAIII | GCCGAG | 1 cut(s) | 1000 |
| NmuCI | GTSAC | 3 cut(s) | 583, 820, 1687 |
| NsiI | ATGCAT | 1 cut(s) | 1891 |
| OliI | CACNNNNGTG | 2 cut(s) | 1398, 1400 |
| PaeR7I | CTCGAG | 1 cut(s) | 965 |
| PagI | TCATGA | 1 cut(s) | 2202 |
| PceI | AGGCCT | 1 cut(s) | 1121 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2108 |
| PctI | GAATGC | 1 cut(s) | 1529 |
| PdmI | GAANNNNTTC | 3 cut(s) | 575, 897, 1371 |
| PfeI | GAWTC | 7 cut(s) | 683, 761, 792, 831, 1010, 1127, 1897 |
| PkrI | GCNGC | 7 cut(s) | 10, 31, 208, 1112, 1201, 1204, 2232 |
| PleI | GAGTC | 5 cut(s) | 46, 185, 484, 1095, 1285 |
| PpsI | GAGTC | 5 cut(s) | 46, 185, 484, 1095, 1285 |
| Ppu21I | YACGTR | 1 cut(s) | 258 |
| PshBI | ATTAAT | 1 cut(s) | 1190 |
| Psp124BI | GAGCTC | 1 cut(s) | 307 |
| PspN4I | GGNNCC | 3 cut(s) | 611, 1060, 1407 |
| PspPI | GGNCC | 4 cut(s) | 610, 733, 1405, 2277 |
| PspXI | VCTCGAGB | 1 cut(s) | 965 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 31, 63 |
| PstI | CTGCAG | 1 cut(s) | 1463 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1956 |
| PsuI | RGATCY | 3 cut(s) | 313, 1035, 2266 |
| RsaI | GTAC | 7 cut(s) | 157, 260, 269, 275, 963, 1325, 2071 |
| RsaNI | GTAC | 7 cut(s) | 156, 259, 268, 274, 962, 1324, 2070 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1214, 1398, 1400 |
| SacI | GAGCTC | 1 cut(s) | 307 |
| SatI | GCNGC | 7 cut(s) | 9, 30, 207, 1111, 1200, 1203, 2231 |
| Sau96I | GGNCC | 4 cut(s) | 610, 733, 1405, 2277 |
| ScaI | AGTACT | 1 cut(s) | 157 |
| SchI | GAGTC | 5 cut(s) | 46, 186, 485, 1095, 1285 |
| SduI | GDGCHC | 2 cut(s) | 241, 307 |
| SfaNI | GCATC | 7 cut(s) | 151, 156, 193, 497, 874, 1876, 2094 |
| SfcI | CTRYAG | 3 cut(s) | 119, 1339, 1459 |
| Sfr274I | CTCGAG | 1 cut(s) | 965 |
| SinI | GGWCC | 3 cut(s) | 610, 733, 1405 |
| SlaI | CTCGAG | 1 cut(s) | 965 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1214, 1398, 1400 |
| SmlI | CTYRAG | 3 cut(s) | 107, 965, 1493 |
| SmoI | CTYRAG | 3 cut(s) | 107, 965, 1493 |
| SseBI | AGGCCT | 1 cut(s) | 1121 |
| SsiI | CCGC | 2 cut(s) | 206, 510 |
| SspI | AATATT | 2 cut(s) | 1552, 1601 |
| SspMI | CTAG | 3 cut(s) | 1160, 1577, 1901 |
| SstI | GAGCTC | 1 cut(s) | 307 |
| StuI | AGGCCT | 1 cut(s) | 1121 |
| StyI | CCWWGG | 1 cut(s) | 1122 |
| TaaI | ACNGT | 8 cut(s) | 123, 421, 589, 614, 987, 1000, 1253, 1343 |
| TaiI | ACGT | 2 cut(s) | 66, 260 |
| TatI | WGTACW | 4 cut(s) | 155, 267, 1323, 2069 |
| TauI | GCSGC | 1 cut(s) | 209 |
| TfiI | GAWTC | 7 cut(s) | 683, 761, 792, 831, 1010, 1127, 1897 |
| TscAI | CASTG | 4 cut(s) | 592, 1005, 1348, 1405 |
| TseFI | GTSAC | 3 cut(s) | 583, 820, 1687 |
| TseI | GCWGC | 6 cut(s) | 8, 29, 1110, 1199, 1202, 2230 |
| Tsp45I | GTSAC | 3 cut(s) | 583, 820, 1687 |
| TspDTI | ATGAA | 8 cut(s) | 206, 756, 843, 890, 894, 1380, 1451, 1825 |
| TspRI | CASTG | 4 cut(s) | 592, 1005, 1348, 1405 |
| VpaK11BI | GGWCC | 3 cut(s) | 610, 733, 1405 |
| VspI | ATTAAT | 1 cut(s) | 1190 |
| XapI | RAATTY | 3 cut(s) | 381, 1649, 2218 |
| XbaI | TCTAGA | 1 cut(s) | 1900 |
| XhoI | CTCGAG | 1 cut(s) | 965 |
| XmnI | GAANNNNTTC | 3 cut(s) | 575, 897, 1371 |
| XspI | CTAG | 3 cut(s) | 1160, 1577, 1901 |
| ZraI | GACGTC | 1 cut(s) | 64 |
| ZrmI | AGTACT | 1 cut(s) | 157 |
| Zsp2I | ATGCAT | 1 cut(s) | 1891 |