FvH4_6g18970

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000039
Physical Location & Seq
Reverse (-)
12573672 .. 12577951
4280 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g18970.t1

Sequence Viewer

Length: 2451 bp
ATGGAGGCGCCGGGGTCCCTTGTTGGAGGAGCTATTCTAGGAACGCTGTTCAGTGATTTGTATGCACGCCTCAAACGTCTGATTCACACTAATCGGATATTTAAGGCGCTCTTCAAGGACATGATATCCAGTCTAGACGCCTTATGGCCACTGATCAGGCCGATTGTTGAATGCAACAACAAGCTAGAGTACTGCTCCAAGGAAGAACTACAAGGTTTAGAAGAAGTGATCATGGAAGGCGCGCAACTGGCCCAAAAGTGCTTGAAGGTTAGCCAGTGGATTCCCTTCAAAAAGTATAAATACGCAAGAAAGCTTCTTAAATGGGACGAAGCTCTTAAAAGGCAGTTAGATATACTCAAGGTCCAAGAAACAAGGGATGTGAAGAAGATCGCACTTGGGTTACATGGCCTGGATGCTAAGATGGATCATATGAATGATATGATGATACATCAATTTTTTGCCGGAAGTTCATCATCATCAAGTCATCATACAGCACTTGAACTTCCACAGCTTCCAACGCTTATGGTTGGATTGGATGTTCCTTTGAGGGAGTTGAAGCGAAAGCTTCTGACAGATGATGGTGTGTCAATGCTTGTGTTGACTGCTCCTGGAGGTTGTGGGAAGACAACTCTAGCCTCCATGTTTTGTCAAGATCAAGAAGTCAAAGATAAATTCGGTCGCAATATTATCTTCGTCACTGTTTCACAAAAGGGGAACATGGACCTTATTGTGCAGCAACTATGTGATCACAACCAGCGTTCTCAGGTACCTCTTTTTCAAAACGAAGTACAAGCAAGTCAATGGCTGCAAAGATATTTTGTGGAAAAAAGACATCATCATCCTATGCTATTGGTACTCGATGATGTTTGGTCGGGATCAGAATCCATTCTTGGGAACTTTCAATTCGAAATGTCAAATTACAAGATTCTAGTAACATCAAGATCCGAATTTACGTGGTTCGGTCCTTCATATCATTTACAACTATTGGACGATGGTAATGCTATGAAACTGTTTCATCATTATGCATCATTGGGAGATGGAAGCTCCCGTATCATAGAAGAACTTTCCAAAAAGATAGTGAAGCGATGTAACGGATTTCCACTTGCCATTACAATTGTGGGAAGATCACTGTGTAAGAAACCTGAAGAGTTTTGGAGAAATACAGAAGCTGAATGGGCGAAAGGTTCCTCGATTCTTGATTCTGAGACCAAATTGTTTCTTTGCCTCCAAAGCAGCTTAGACGCCTTAGATGAAGATGTGGCCCTTGTTAAGGAATGTTTCTTCGACCTAGGTTCATTTCCTGAAGATTATCGAATCCCTCTTGCTACCCTCTTTGATATGTGGGCAGAGTTATACGGGCTAGATGATCACAGTAAGTGTATTGCAAACGTCTATGAACTCAGGACTCGGACTTTGGCTAATCTTATAGACCACAGAGAGGTAAAGATGGAGGGGGAGGACTTCTATGATGAATGCTTTGTTACTCAACATGATTTGCTTAGAGAGCTAGCCATTTACCACGCTAAATTTGACCCAGTAGATCGTCGAAAAAGAGTAAACATAGAGATCTGTGGAAACGATCTTCCCAAGTGGTGGAGGGAACGAAAGTATCAACCAATGAAAGCTCGTCTATTGTCTATCTCAACTGATAGGGGGTTCTCAATTGAATGGCCCAACATGCAAGTACCAGAAGCTGAGGTTCTCGTCTTGAATTTTCAGACAAAGTCGTACTCATTACCTAAATTTGTGGAGCAAATGAACAACTTGAAGGTTATAGTAATCGCAAAGGACGATTACCAGAGCGCTGATATAAGTAATTTTGAACTATTGGGTTCATCATCTAATCTGAAGAGTGTAAGATTAGAAGGCATCTCAATTGCTTGCATAACAAGGAAGCCGATGCAATTGAGTAGTCTAAAGAAGATCTCTCTCTACAAGTGTGTCATTGGTCTAACTTTCAGCAACGAAGTTGTAAAAATGTCTGATGCATTTCCAGTCCTAGAGGAAATGAATATTCAAGAGTGCAAATATTTGGGAAACTTGCTTCCGGAGATTTGTGATCTGATTCAGCTAAAGAAACTCAGTATCACTGATCATTCTGATATAGAAGCCTTGCCTGAAGAATTTGGAAATTTGGTGAACATAGAAGTACTGAGGTTAAGGTCCTGTTATGACCTTTTGAAGTTACCAATCTCAATTGGAAATCTCAAAAAGTTAAAACTTCTTGACATATTTAACTGCATCAGCATCACGGAGTTGCCTCCATCCATTGGTGAATTGAGCAGTTTAAGAAAGTTGAACATGAAATGGTGCTACAAAATTAAAAAACTGCCTCTGTCAGTTTTGTTGCTTGATCAGTTAGAGGAAGTGATATGCGATGAAGCTACAAAACCTTATTTATGGGATCTCTTTTCGAACGCTCTCAGAAACACGCGCATGGTGGCTACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
NB-ARC RPW8

Protein Analysis

817

Amino Acids

93.53

Weight (kDa)

6.36

Isoelectric Point (pI)

44.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RPW8 PF05659 6 - 142 3.5e-20 Arabidopsis broad-spectrum mildew resistance protein RPW8
NB-ARC PF00931 182 - 317 4.1e-16 NB-ARC domain
LRR_14 PF23598 659 - 745 2e-10 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 766
AccB1I GGYRCC 2 cut(s) 7, 766
AccB7I CCANNNNNTGG 2 cut(s) 1593, 2270
AccII CGCG 2 cut(s) 242, 2434
AccIII TCCGGA 1 cut(s) 2047
AclWI GGATC 4 cut(s) 432, 883, 936, 2412
AcoI YGGCCR 1 cut(s) 146
AcsI RAATTY 7 cut(s) 671, 947, 1526, 1711, 1742, 2123, 2131
AcuI CTGAAG 4 cut(s) 1164, 1323, 1868, 2139
AcyI GRCGYC 3 cut(s) 8, 138, 1242
AfaI GTAC 7 cut(s) 191, 768, 789, 855, 1686, 1730, 2151
AfeI AGCGCT 1 cut(s) 1804
AfiI CCNNNNNNNGG 5 cut(s) 891, 1270, 1438, 1593, 2270
AjnI CCWGG 2 cut(s) 408, 607
AjuI GAANNNNNNNTTGG 2 cut(s) 873, 905
AloI GAACNNNNNNTCC 2 cut(s) 522, 554
Alw26I GTCTC 1 cut(s) 1199
AlwI GGATC 4 cut(s) 432, 883, 936, 2412
AlwNI CAGNNNCTG 2 cut(s) 1169, 1694
Aor13HI TCCGGA 1 cut(s) 2047
Aor51HI AGCGCT 1 cut(s) 1804
AoxI GGCC 6 cut(s) 146, 158, 249, 406, 1260, 1670
ApeKI GCWGC 3 cut(s) 733, 805, 1233
ApoI RAATTY 7 cut(s) 671, 947, 1526, 1711, 1742, 2123, 2131
ArsI GACNNNNNNTTYG 2 cut(s) 1396, 1428
Asp700I GAANNNNTTC 1 cut(s) 885
Asp718I GGTACC 1 cut(s) 766
AspA2I CCTAGG 1 cut(s) 1288
AspLEI GCGC 6 cut(s) 10, 109, 242, 244, 1805, 2436
AspS9I GGNCC 8 cut(s) 15, 250, 361, 721, 962, 1261, 1671, 2163
AsuC2I CCSGG 1 cut(s) 12
AsuHPI GGTGA 2 cut(s) 2149, 2285
AsuII TTCGAA 2 cut(s) 906, 2414
AsuNHI GCTAGC 1 cut(s) 1507
AvaII GGWCC 5 cut(s) 15, 361, 721, 962, 2163
AvrII CCTAGG 1 cut(s) 1288
BaeI ACNNNNGTAYC 2 cut(s) 1592, 1625
BalI TGGCCA 1 cut(s) 148
BanI GGYRCC 2 cut(s) 7, 766
BbsI GAAGAC 1 cut(s) 629
BbvCI CCTCAGC 1 cut(s) 1695
BbvI GCAGC 3 cut(s) 745, 792, 1245
BccI CCATC 6 cut(s) 415, 572, 986, 1031, 1441, 2272
BcgI CGANNNNNNTGC 2 cut(s) 980, 1014
BciT130I CCWGG 2 cut(s) 410, 609
BclI TGATCA 6 cut(s) 153, 228, 745, 1366, 2092, 2353
BcnI CCSGG 1 cut(s) 12
BcoDI GTCTC 1 cut(s) 1199
BfaI CTAG 9 cut(s) 38, 134, 185, 632, 929, 1289, 1361, 1508, 2000
BfoI RGCGCY 3 cut(s) 11, 110, 1806
BglII AGATCT 2 cut(s) 1566, 1923
BisI GCNGC 3 cut(s) 734, 806, 1234
BlnI CCTAGG 1 cut(s) 1288
BlsI GCNGC 3 cut(s) 735, 807, 1235
BmcAI AGTACT 2 cut(s) 191, 2151
Bme1390I CCNGG 3 cut(s) 12, 410, 609
Bme18I GGWCC 5 cut(s) 15, 361, 721, 962, 2163
BmgT120I GGNCC 8 cut(s) 15, 250, 361, 721, 962, 1261, 1671, 2163
BmiI GGNNCC 5 cut(s) 9, 16, 17, 768, 1186
BmrFI CCNGG 3 cut(s) 12, 410, 609
BmrI ACTGGG 1 cut(s) 1529
BmsI GCATC 7 cut(s) 403, 1034, 1878, 1890, 1975, 2250, 2256
BmtI GCTAGC 1 cut(s) 1511
BmuI ACTGGG 1 cut(s) 1529
BpiI GAAGAC 1 cut(s) 629
BplI GAGNNNNNCTC 2 cut(s) 179, 211
BpmI CTGGAG 1 cut(s) 630
Bpu10I CCTNAGC 1 cut(s) 1695
Bpu14I TTCGAA 2 cut(s) 906, 2414
BpuEI CTTGAG 1 cut(s) 341
BpuMI CCSGG 1 cut(s) 12
BsaAI YACGTR 1 cut(s) 954
BsaBI GATNNNNATC 1 cut(s) 880
BsaHI GRCGYC 3 cut(s) 8, 138, 1242
BsaI GGTCTC 1 cut(s) 1199
BsaJI CCNNGG 3 cut(s) 11, 198, 1288
BsaWI WCCGGW 1 cut(s) 2047
Bsc4I CCNNNNNNNGG 5 cut(s) 891, 1270, 1438, 1593, 2270
Bse1I ACTGG 5 cut(s) 129, 252, 274, 1535, 1994
Bse8I GATNNNNATC 1 cut(s) 880
BseAI TCCGGA 1 cut(s) 2047
BseBI CCWGG 2 cut(s) 410, 609
BseDI CCNNGG 3 cut(s) 11, 198, 1288
BseGI GGATG 5 cut(s) 382, 418, 541, 838, 2264
BseJI GATNNNNATC 1 cut(s) 880
BseLI CCNNNNNNNGG 5 cut(s) 891, 1270, 1438, 1593, 2270
BseMII CTCAG 7 cut(s) 776, 1194, 1414, 1686, 2095, 2144, 2437
BseNI ACTGG 5 cut(s) 129, 252, 274, 1535, 1994
BsePI GCGCGC 1 cut(s) 240
BseRI GAGGAG 1 cut(s) 42
BseXI GCAGC 3 cut(s) 745, 792, 1245
BsgI GTGCAG 1 cut(s) 752
Bsh1236I CGCG 2 cut(s) 242, 2434
Bsh1285I CGRYCG 1 cut(s) 679
BshFI GGCC 6 cut(s) 148, 160, 251, 408, 1262, 1672
BshNI GGYRCC 2 cut(s) 7, 766
BsiEI CGRYCG 1 cut(s) 679
BsiSI CCGG 3 cut(s) 11, 462, 2048
BslFI GGGAC 1 cut(s) 338
BslI CCNNNNNNNGG 5 cut(s) 891, 1270, 1438, 1593, 2270
BsmAI GTCTC 1 cut(s) 1199
BsmFI GGGAC 1 cut(s) 338
BsmI GAATGC 2 cut(s) 176, 1478
BsnI GGCC 6 cut(s) 148, 160, 251, 408, 1262, 1672
Bso31I GGTCTC 1 cut(s) 1199
Bsp119I TTCGAA 2 cut(s) 906, 2414
Bsp13I TCCGGA 1 cut(s) 2047
BspANI GGCC 6 cut(s) 148, 160, 251, 408, 1262, 1672
BspCNI CTCAG 7 cut(s) 775, 1195, 1413, 1687, 2094, 2145, 2436
BspEI TCCGGA 1 cut(s) 2047
BspFNI CGCG 2 cut(s) 242, 2434
BspLI GGNNCC 5 cut(s) 9, 16, 17, 768, 1186
BspOI GCTAGC 1 cut(s) 1511
BspPI GGATC 4 cut(s) 432, 883, 936, 2412
BspQI GCTCTTC 1 cut(s) 116
BspT104I TTCGAA 2 cut(s) 906, 2414
BspT107I GGYRCC 2 cut(s) 7, 766
BspTNI GGTCTC 1 cut(s) 1199
BsrI ACTGG 5 cut(s) 129, 252, 274, 1535, 1994
BssECI CCNNGG 3 cut(s) 11, 198, 1288
BssHII GCGCGC 1 cut(s) 240
BssNI GRCGYC 3 cut(s) 8, 138, 1242
BssT1I CCWWGG 2 cut(s) 198, 1288
Bst2UI CCWGG 2 cut(s) 410, 609
Bst4CI ACNGT 4 cut(s) 700, 1011, 1131, 1373
Bst6I CTCTTC 3 cut(s) 116, 1140, 1844
BstACI GRCGYC 3 cut(s) 8, 138, 1242
BstBAI YACGTR 1 cut(s) 954
BstBI TTCGAA 2 cut(s) 906, 2414
BstC8I GCNNGC 4 cut(s) 67, 242, 1509, 1882
BstENI CCTNNNNNAGG 1 cut(s) 1268
BstF5I GGATG 5 cut(s) 382, 418, 541, 838, 2264
BstFNI CGCG 2 cut(s) 242, 2434
BstH2I RGCGCY 3 cut(s) 11, 110, 1806
BstHHI GCGC 6 cut(s) 10, 109, 242, 244, 1805, 2436
BstMAI GTCTC 1 cut(s) 1199
BstMCI CGRYCG 1 cut(s) 679
BstMWI GCNNNNNNNGC 6 cut(s) 248, 517, 1175, 1230, 1504, 1678
BstNI CCWGG 2 cut(s) 410, 609
BstNSI RCATGY 1 cut(s) 1681
BstSCI CCNGG 3 cut(s) 10, 408, 607
BstUI CGCG 2 cut(s) 242, 2434
BstV1I GCAGC 3 cut(s) 745, 792, 1245
BstV2I GAAGAC 1 cut(s) 629
BstX2I RGATCY 4 cut(s) 941, 1566, 1923, 2404
BstYI RGATCY 4 cut(s) 941, 1566, 1923, 2404
BsuRI GGCC 6 cut(s) 148, 160, 251, 408, 1262, 1672
BtgZI GCGATG 2 cut(s) 1099, 2391
BtsCI GGATG 5 cut(s) 382, 418, 541, 838, 2264
BtsIMutI CAGTG 6 cut(s) 58, 149, 281, 696, 1127, 2088
Cac8I GCNNGC 4 cut(s) 67, 242, 1509, 1882
CaiI CAGNNNCTG 2 cut(s) 1169, 1694
CfoI GCGC 6 cut(s) 10, 109, 242, 244, 1805, 2436
Cfr13I GGNCC 8 cut(s) 15, 250, 361, 721, 962, 1261, 1671, 2163
CseI GACGC 2 cut(s) 146, 1250
Csp6I GTAC 7 cut(s) 190, 767, 788, 854, 1685, 1729, 2150
CviQI GTAC 7 cut(s) 190, 767, 788, 854, 1685, 1729, 2150
DinI GGCGCC 1 cut(s) 9
EaeI YGGCCR 1 cut(s) 146
Eam1104I CTCTTC 3 cut(s) 116, 1140, 1844
EarI CTCTTC 3 cut(s) 116, 1140, 1844
Eco130I CCWWGG 2 cut(s) 198, 1288
Eco31I GGTCTC 1 cut(s) 1199
Eco32I GATATC 1 cut(s) 126
Eco47I GGWCC 5 cut(s) 15, 361, 721, 962, 2163
Eco47III AGCGCT 1 cut(s) 1804
Eco57I CTGAAG 4 cut(s) 1164, 1323, 1868, 2139
EcoNI CCTNNNNNAGG 1 cut(s) 1268
EcoO109I RGGNCCY 2 cut(s) 15, 2163
EcoRII CCWGG 2 cut(s) 408, 607
EcoRV GATATC 1 cut(s) 126
EcoT14I CCWWGG 2 cut(s) 198, 1288
EcoT22I ATGCAT 2 cut(s) 1027, 1990
EgeI GGCGCC 1 cut(s) 9
EheI GGCGCC 1 cut(s) 9
ErhI CCWWGG 2 cut(s) 198, 1288
FalI AAGNNNNNCTT 2 cut(s) 95, 127
FaqI GGGAC 1 cut(s) 338
FauNDI CATATG 1 cut(s) 429
FbaI TGATCA 6 cut(s) 153, 228, 745, 1366, 2092, 2353
Fnu4HI GCNGC 3 cut(s) 734, 806, 1234
FokI GGATG 5 cut(s) 389, 425, 548, 825, 2251
Fsp4HI GCNGC 3 cut(s) 734, 806, 1234
FspBI CTAG 9 cut(s) 38, 134, 185, 632, 929, 1289, 1361, 1508, 2000
GlaI GCGC 6 cut(s) 9, 108, 241, 243, 1804, 2435
GluI GCNGC 3 cut(s) 734, 806, 1234
GsuI CTGGAG 1 cut(s) 630
HaeII RGCGCY 3 cut(s) 11, 110, 1806
HaeIII GGCC 6 cut(s) 148, 160, 251, 408, 1262, 1672
HapII CCGG 3 cut(s) 11, 462, 2048
HgaI GACGC 2 cut(s) 146, 1250
HhaI GCGC 6 cut(s) 10, 109, 242, 244, 1805, 2436
Hin1I GRCGYC 3 cut(s) 8, 138, 1242
Hin6I GCGC 6 cut(s) 8, 107, 240, 242, 1803, 2434
HinP1I GCGC 6 cut(s) 8, 107, 240, 242, 1803, 2434
HincII GTYRAC 1 cut(s) 600
HindII GTYRAC 1 cut(s) 600
HindIII AAGCTT 2 cut(s) 311, 563
HinfI GANTC 9 cut(s) 82, 280, 881, 925, 1192, 1199, 1314, 1405, 2065
HpaII CCGG 3 cut(s) 11, 462, 2048
HphI GGTGA 2 cut(s) 2149, 2285
Hpy166II GTNNAC 3 cut(s) 600, 1558, 2140
Hpy8I GTNNAC 3 cut(s) 600, 1558, 2140
Hpy99I CGWCG 1 cut(s) 1548
HpyAV CCTTC 6 cut(s) 230, 259, 295, 975, 1762, 1859
HpyCH4III ACNGT 4 cut(s) 700, 1011, 1131, 1373
HpyCH4IV ACGT 3 cut(s) 76, 953, 1389
HpyF10VI GCNNNNNNNGC 6 cut(s) 248, 517, 1175, 1230, 1504, 1678
HpySE526I ACGT 3 cut(s) 76, 953, 1389
Hsp92I GRCGYC 3 cut(s) 8, 138, 1242
HspAI GCGC 6 cut(s) 8, 107, 240, 242, 1803, 2434
KasI GGCGCC 1 cut(s) 7
KflI GGGWCCC 1 cut(s) 15
Kpn2I TCCGGA 1 cut(s) 2047
KpnI GGTACC 1 cut(s) 770
Ksp22I TGATCA 6 cut(s) 153, 228, 745, 1366, 2092, 2353
LguI GCTCTTC 1 cut(s) 116
LmnI GCTCC 5 cut(s) 29, 200, 610, 1049, 1750
Lsp1109I GCAGC 3 cut(s) 745, 792, 1245
LweI GCATC 7 cut(s) 403, 1034, 1878, 1890, 1975, 2250, 2256
MaeI CTAG 9 cut(s) 38, 134, 185, 632, 929, 1289, 1361, 1508, 2000
MaeII ACGT 3 cut(s) 76, 953, 1389
MaeIII GTNAC 6 cut(s) 399, 694, 931, 1088, 1480, 2184
MfeI CAATTG 5 cut(s) 1113, 1662, 1875, 1904, 2196
MflI RGATCY 4 cut(s) 941, 1566, 1923, 2404
MlsI TGGCCA 1 cut(s) 148
MluNI TGGCCA 1 cut(s) 148
Mly113I GGCGCC 1 cut(s) 8
MlyI GAGTC 1 cut(s) 1399
MmeI TCCRAC 3 cut(s) 4, 508, 539
Mox20I TGGCCA 1 cut(s) 148
Mph1103I ATGCAT 2 cut(s) 1027, 1990
MroI TCCGGA 1 cut(s) 2047
MroXI GAANNNNTTC 1 cut(s) 885
MscI TGGCCA 1 cut(s) 148
MseI TTAA 9 cut(s) 102, 318, 336, 1269, 2159, 2216, 2235, 2288, 2322
MslI CAYNNNNRTG 3 cut(s) 432, 1020, 2435
Msp20I TGGCCA 1 cut(s) 148
MspI CCGG 3 cut(s) 11, 462, 2048
MspR9I CCNGG 3 cut(s) 12, 410, 609
MunI CAATTG 5 cut(s) 1113, 1662, 1875, 1904, 2196
Mva1269I GAATGC 2 cut(s) 176, 1478
MvaI CCWGG 2 cut(s) 410, 609
MvnI CGCG 2 cut(s) 242, 2434
MwoI GCNNNNNNNGC 6 cut(s) 248, 517, 1175, 1230, 1504, 1678
NarI GGCGCC 1 cut(s) 8
NciI CCSGG 1 cut(s) 12
NdeI CATATG 1 cut(s) 429
NheI GCTAGC 1 cut(s) 1507
NlaIV GGNNCC 5 cut(s) 9, 16, 17, 768, 1186
NmuCI GTSAC 1 cut(s) 694
NsiI ATGCAT 2 cut(s) 1027, 1990
NspI RCATGY 1 cut(s) 1681
NspV TTCGAA 2 cut(s) 906, 2414
PauI GCGCGC 1 cut(s) 240
PciSI GCTCTTC 1 cut(s) 116
PcsI WCGNNNNNNNCGW 2 cut(s) 73, 1788
PctI GAATGC 2 cut(s) 176, 1478
PdmI GAANNNNTTC 1 cut(s) 885
PfeI GAWTC 8 cut(s) 82, 280, 881, 925, 1192, 1199, 1314, 2065
PflFI GACNNNGTC 1 cut(s) 1723
PflMI CCANNNNNTGG 2 cut(s) 1593, 2270
PfoI TCCNGGA 1 cut(s) 607
PkrI GCNGC 3 cut(s) 735, 807, 1235
PleI GAGTC 1 cut(s) 1399
PluTI GGCGCC 1 cut(s) 11
PpsI GAGTC 1 cut(s) 1399
Ppu21I YACGTR 1 cut(s) 954
PpuMI RGGWCCY 2 cut(s) 15, 2163
Psp5II RGGWCCY 2 cut(s) 15, 2163
Psp6I CCWGG 2 cut(s) 408, 607
PspGI CCWGG 2 cut(s) 408, 607
PspN4I GGNNCC 5 cut(s) 9, 16, 17, 768, 1186
PspPI GGNCC 8 cut(s) 15, 250, 361, 721, 962, 1261, 1671, 2163
PspPPI RGGWCCY 2 cut(s) 15, 2163
PstNI CAGNNNCTG 2 cut(s) 1169, 1694
PsuI RGATCY 4 cut(s) 941, 1566, 1923, 2404
PsyI GACNNNGTC 1 cut(s) 1723
PteI GCGCGC 1 cut(s) 240
RsaI GTAC 7 cut(s) 191, 768, 789, 855, 1686, 1730, 2151
RsaNI GTAC 7 cut(s) 190, 767, 788, 854, 1685, 1729, 2150
RseI CAYNNNNRTG 3 cut(s) 432, 1020, 2435
SapI GCTCTTC 1 cut(s) 116
SaqAI TTAA 9 cut(s) 102, 318, 336, 1269, 2159, 2216, 2235, 2288, 2322
SatI GCNGC 3 cut(s) 734, 806, 1234
Sau96I GGNCC 8 cut(s) 15, 250, 361, 721, 962, 1261, 1671, 2163
ScaI AGTACT 2 cut(s) 191, 2151
SchI GAGTC 1 cut(s) 1399
ScrFI CCNGG 3 cut(s) 12, 410, 609
SfaNI GCATC 7 cut(s) 403, 1034, 1878, 1890, 1975, 2250, 2256
SfoI GGCGCC 1 cut(s) 9
SfuI TTCGAA 2 cut(s) 906, 2414
SinI GGWCC 5 cut(s) 15, 361, 721, 962, 2163
SmiMI CAYNNNNRTG 3 cut(s) 432, 1020, 2435
SmlI CTYRAG 1 cut(s) 356
SmoI CTYRAG 1 cut(s) 356
SspDI GGCGCC 1 cut(s) 7
SspI AATATT 3 cut(s) 685, 2014, 2030
SspMI CTAG 9 cut(s) 38, 134, 185, 632, 929, 1289, 1361, 1508, 2000
StyD4I CCNGG 3 cut(s) 10, 408, 607
StyI CCWWGG 2 cut(s) 198, 1288
TaaI ACNGT 4 cut(s) 700, 1011, 1131, 1373
TaiI ACGT 3 cut(s) 79, 956, 1392
TaqI TCGA 7 cut(s) 858, 906, 1190, 1284, 1312, 1546, 2414
TaqII GACCGA 2 cut(s) 665, 950
TatI WGTACW 3 cut(s) 189, 787, 2149
TfiI GAWTC 8 cut(s) 82, 280, 881, 925, 1192, 1199, 1314, 2065
Tru1I TTAA 9 cut(s) 102, 318, 336, 1269, 2159, 2216, 2235, 2288, 2322
Tru9I TTAA 9 cut(s) 102, 318, 336, 1269, 2159, 2216, 2235, 2288, 2322
TscAI CASTG 6 cut(s) 58, 156, 281, 703, 1134, 2095
TseFI GTSAC 1 cut(s) 694
TseI GCWGC 3 cut(s) 733, 805, 1233
Tsp45I GTSAC 1 cut(s) 694
TspGWI ACGGA 2 cut(s) 1107, 2267
TspRI CASTG 6 cut(s) 58, 156, 281, 703, 1134, 2095
Tth111I GACNNNGTC 1 cut(s) 1723
Van91I CCANNNNNTGG 2 cut(s) 1593, 2270
VpaK11BI GGWCC 5 cut(s) 15, 361, 721, 962, 2163
XagI CCTNNNNNAGG 1 cut(s) 1268
XapI RAATTY 7 cut(s) 671, 947, 1526, 1711, 1742, 2123, 2131
XbaI TCTAGA 1 cut(s) 133
XceI RCATGY 1 cut(s) 1681
XcmI CCANNNNNNNNNTGG 1 cut(s) 1114
XmaJI CCTAGG 1 cut(s) 1288
XmnI GAANNNNTTC 1 cut(s) 885
XspI CTAG 9 cut(s) 38, 134, 185, 632, 929, 1289, 1361, 1508, 2000
ZrmI AGTACT 2 cut(s) 191, 2151
Zsp2I ATGCAT 2 cut(s) 1027, 1990
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.