Rmu_sc0002316.1_g000071

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002316.1
OG0000039
Physical Location & Seq
Reverse (-)
333805 .. 337815
4011 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002316.1_g000071.1.cds

Sequence Viewer

Length: 2451 bp
atggaagtggttgccacaattgtaggggctgctctaggagcagcgttccagcagctctttgatagtgttataaaggccaacagaaaagctacaatgtttgattccgtcttcagggatctcgatctcacgctccggtcttatcaagaattggttaaagatatagaacaagttgaaaattttcaacccttgccgggcctagatggtttaaaaacgaagatggaggagggcagaaagcttgttgacaagtgctttaatattcatcccttgttgaatattactatcttcaaaaagaagaaatatgttagaaaacttcgtgcattggatggatctcttcaacgactcttcttcatattgaaatggcaagtagacaacaatctggggaacagggtaagcaatttgcagaggtcggtggaccgatttgataggaacgtggtggcgctaaaccgaactgaaaatcaaatcagaggttggtgcgtggtacccaatcctccgtcatttactgttggattggatgagcctttgaaggatttgaagatgaagtttctaaatgatgatcaagtgtcaatgcttgtgctcactgctcctggaggatgcgggaaaaccactttggctcagatgttctgtcgagatgaggaagtcgaagataaattcaagagcaatgtcttctttgttactgtttcaatgaagcccaacttataccaaattgtacaagagctgtatcatggaacgggtgcccaggtccccgatttccaaaatgaagcgactgcagttagctggctgcagcaatttctgaagcaaacaggacaaaatcctatgttgttggtcctggatgatgtttgggctggatcagaattcattcttgagaagttctatgaattaaaaatgacaaattacaagatattggtgacatcaaggtctgcttttccaagatttggttctccatattatgtagaatgtttgaacgatgaagatgcaatggcactttttcaccatgcagcatccttaggagacaggcggagctcttatatttcagaagatcttccaagaaagatagtagaacgttgtatgggatttccacttgcaattacagttgtcggaagatcactttgcgggcagccaatagagatttggcaaaaaagagtactggaatggtctagaggttgttctgttcttgagtcagaacatgatttgcttgattgcctccaaagaagcttagatgctttggatgaagagaagtctcttatcagggaatgcttcatagaccttggtttatttcctgaagataaaagaatctcagctactgtcctcattgatatgtgggcagagttatatggcataaatgaggacatttcgtccattgtgaacctctatgaactcgcctctcggagtttggttaatctggtagtcacaaggaatgacaaggatggcgatggctattacactgaacactttgttacacagcatgacatgcttagggacttggctatccaacagattagtcgggaaccactacaacagagaatgagacttatgattgacataagtggagacaactttcctatgtggtggaaagaacaaaagtatcattccctcatagctcgccttgtatttatctcaacagacgaagagttctcatctaaatggcaaaacttgccactaccagaagcagaggttttgattttgaactttcagaccaagtattatgccttacctgagtttgtggaggaaatgaagaaactgaagactctagtactcacaagttcaggtatcggtcctgctgagttgaataactttcaactagttgattcgaaaccaaatctaaagagaatcagactagaacgaatttcatttccttcaataagcaggtatcctatacatttggaaagtttgaaaaagatttctctattcatgtgtagcgttggccaaggttttggtaacagttccatacatatatcagaggcttttccaaatcttgttgaaatgaatattgattactgcaatgatttggtggagttgcctgccaatctctgtgaccttattcaattgaagaaactcagtgtcaccaattctcataagctctctgtcttacctgaagacattggaaatctagtaaatttagagctgctgaggcttaggtgttgtacagacttgtcagagttacccggctcgattaggaacctcaagaacttaaacttgcttgacatatctgattgctttagcattaaggaattgcctgaagacattggagaactgtgcagtttagaaaggttcaacatgagacattgctcgagattgaatgagttgccttcttcagttgtggatcttaaacagttgaaggaagtgacatgtgatgaagagacagaaatgttatgggagcccttcaaaaggtatctcaggaacatacacataaaggttgtgaaagaagatatcaacctgaattggctccactag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
NB-ARC RPW8

Protein Analysis

816

Amino Acids

93.85

Weight (kDa)

5.46

Isoelectric Point (pI)

42.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 71
AasI GACNNNNNNGTC 1 cut(s) 913
Acc36I ACCTGC 1 cut(s) 1854
Acc65I GGTACC 1 cut(s) 478
AccB1I GGYRCC 2 cut(s) 478, 731
AccB7I CCANNNNNTGG 1 cut(s) 932
AccI GTMKAC 1 cut(s) 366
AciI CCGC 3 cut(s) 594, 1015, 1110
AclI AACGTT 1 cut(s) 1060
AclWI GGATC 4 cut(s) 123, 334, 853, 2328
AcoI YGGCCR 1 cut(s) 1921
AcsI RAATTY 5 cut(s) 175, 647, 851, 1842, 2113
AcuI CTGAAG 7 cut(s) 94, 812, 1299, 1760, 2112, 2256, 2295
AfaI GTAC 5 cut(s) 480, 708, 1143, 1752, 2143
AfiI CCNNNNNNNGG 4 cut(s) 111, 191, 932, 2385
AflIII ACRYGT 1 cut(s) 2345
AhdI GACNNNNNGTC 1 cut(s) 1351
AhlI ACTAGT 1 cut(s) 1798
AjnI CCWGG 3 cut(s) 583, 735, 825
AjuI GAANNNNNNNTTGG 4 cut(s) 590, 622, 919, 951
Alw21I GWGCWC 2 cut(s) 576, 1022
Alw26I GTCTC 6 cut(s) 1002, 1242, 1519, 1542, 2272, 2351
AlwI GGATC 4 cut(s) 123, 334, 853, 2328
AlwNI CAGNNNCTG 1 cut(s) 1301
Ama87I CYCGRG 1 cut(s) 2287
AoxI GGCC 3 cut(s) 75, 193, 1921
ApeKI GCWGC 8 cut(s) 29, 41, 52, 778, 781, 995, 1114, 2122
ApoI RAATTY 5 cut(s) 175, 647, 851, 1842, 2113
Asp700I GAANNNNTTC 3 cut(s) 177, 855, 1038
Asp718I GGTACC 1 cut(s) 478
AspLEI GCGC 1 cut(s) 439
AspS9I GGNCC 5 cut(s) 193, 412, 739, 823, 1772
AsuC2I CCSGG 2 cut(s) 192, 2163
AsuHPI GGTGA 3 cut(s) 916, 980, 2053
AsuII TTCGAA 1 cut(s) 1808
AvaI CYCGRG 1 cut(s) 2287
AvaII GGWCC 4 cut(s) 412, 739, 823, 1772
AxyI CCTNAGG 1 cut(s) 1003
BaeGI GKGCMC 1 cut(s) 736
BaeI ACNNNNGTAYC 2 cut(s) 1565, 1598
BalI TGGCCA 1 cut(s) 1923
BanI GGYRCC 2 cut(s) 478, 731
BanII GRGCYC 2 cut(s) 1022, 2379
BbsI GAAGAC 5 cut(s) 100, 655, 1748, 2100, 2244
Bbv12I GWGCWC 2 cut(s) 576, 1022
BbvCI CCTCAGC 1 cut(s) 2126
BbvI GCAGC 8 cut(s) 16, 53, 64, 765, 793, 1007, 1126, 2109
BccI CCATC 5 cut(s) 194, 211, 317, 1418, 1424
BcgI CGANNNNNNTGC 2 cut(s) 953, 987
BciT130I CCWGG 3 cut(s) 585, 737, 827
BciVI GTATCC 1 cut(s) 1878
BclI TGATCA 1 cut(s) 553
BcnI CCSGG 2 cut(s) 192, 2163
BcoDI GTCTC 6 cut(s) 1002, 1242, 1519, 1542, 2272, 2351
BcuI ACTAGT 1 cut(s) 1798
BfaI CTAG 8 cut(s) 35, 197, 1155, 1748, 1799, 1835, 2108, 2449
BfmI CTRYAG 2 cut(s) 765, 779
BfoI RGCGCY 1 cut(s) 440
BfuAI ACCTGC 1 cut(s) 1854
BfuI GTATCC 1 cut(s) 1878
BglII AGATCT 1 cut(s) 1036
BisI GCNGC 8 cut(s) 30, 42, 53, 779, 782, 996, 1115, 2123
BlsI GCNGC 8 cut(s) 31, 43, 54, 780, 783, 997, 1116, 2124
BmcAI AGTACT 2 cut(s) 1143, 1752
Bme1390I CCNGG 5 cut(s) 192, 585, 737, 827, 2163
Bme18I GGWCC 4 cut(s) 412, 739, 823, 1772
BmeRI GACNNNNNGTC 1 cut(s) 1351
BmeT110I CYCGRG 1 cut(s) 2287
BmgT120I GGNCC 5 cut(s) 193, 412, 739, 823, 1772
BmiI GGNNCC 7 cut(s) 480, 733, 741, 1506, 2177, 2376, 2444
BmrFI CCNGG 5 cut(s) 192, 585, 737, 827, 2163
BmsI GCATC 4 cut(s) 581, 961, 1007, 1207
BpiI GAAGAC 5 cut(s) 100, 655, 1748, 2100, 2244
BpmI CTGGAG 1 cut(s) 606
Bpu10I CCTNAGC 3 cut(s) 1472, 2126, 2132
Bpu14I TTCGAA 1 cut(s) 1808
BpuEI CTTGAG 3 cut(s) 881, 1193, 2165
BpuMI CCSGG 2 cut(s) 192, 2163
BsaBI GATNNNNATC 1 cut(s) 120
BsaJI CCNNGG 3 cut(s) 735, 1264, 1924
BsaWI WCCGGW 1 cut(s) 132
Bsc4I CCNNNNNNNGG 4 cut(s) 111, 191, 932, 2385
Bse1I ACTGG 1 cut(s) 1149
Bse21I CCTNAGG 1 cut(s) 1003
Bse3DI GCAATG 4 cut(s) 664, 981, 2005, 2281
Bse8I GATNNNNATC 1 cut(s) 120
BseBI CCWGG 3 cut(s) 585, 737, 827
BseDI CCNNGG 3 cut(s) 735, 1264, 1924
BseGI GGATG 8 cut(s) 259, 328, 517, 596, 835, 998, 1231, 1429
BseJI GATNNNNATC 1 cut(s) 120
BseLI CCNNNNNNNGG 4 cut(s) 111, 191, 932, 2385
BseMI GCAATG 4 cut(s) 664, 981, 2005, 2281
BseMII CTCAG 7 cut(s) 626, 1308, 1704, 1770, 2068, 2117, 2407
BseNI ACTGG 1 cut(s) 1149
BseRI GAGGAG 1 cut(s) 236
BseSI GKGCMC 1 cut(s) 736
BseXI GCAGC 8 cut(s) 16, 53, 64, 765, 793, 1007, 1126, 2109
BsgI GTGCAG 1 cut(s) 2275
BshFI GGCC 3 cut(s) 77, 195, 1923
BshNI GGYRCC 2 cut(s) 478, 731
BsiHKAI GWGCWC 2 cut(s) 576, 1022
BsiHKCI CYCGRG 1 cut(s) 2287
BsiSI CCGG 3 cut(s) 133, 191, 2163
BslFI GGGAC 2 cut(s) 725, 1490
BslI CCNNNNNNNGG 4 cut(s) 111, 191, 932, 2385
BsmAI GTCTC 6 cut(s) 1002, 1242, 1519, 1542, 2272, 2351
BsmFI GGGAC 2 cut(s) 725, 1490
BsmI GAATGC 1 cut(s) 1256
BsnI GGCC 3 cut(s) 77, 195, 1923
BsoBI CYCGRG 1 cut(s) 2287
Bsp119I TTCGAA 1 cut(s) 1808
Bsp1286I GDGCHC 4 cut(s) 576, 736, 1022, 2379
Bsp1407I TGTACA 2 cut(s) 706, 2141
Bsp143I GATC 8 cut(s) 115, 121, 326, 553, 845, 1036, 1100, 2320
BspACI CCGC 3 cut(s) 594, 1015, 1110
BspANI GGCC 3 cut(s) 77, 195, 1923
BspCNI CTCAG 7 cut(s) 625, 1307, 1705, 1771, 2067, 2118, 2406
BspLI GGNNCC 7 cut(s) 480, 733, 741, 1506, 2177, 2376, 2444
BspMAI CTGCAG 2 cut(s) 769, 783
BspMI ACCTGC 1 cut(s) 1854
BspPI GGATC 4 cut(s) 123, 334, 853, 2328
BspT104I TTCGAA 1 cut(s) 1808
BspT107I GGYRCC 2 cut(s) 478, 731
BsrDI GCAATG 4 cut(s) 664, 981, 2005, 2281
BsrGI TGTACA 2 cut(s) 706, 2141
BsrI ACTGG 1 cut(s) 1149
BssECI CCNNGG 3 cut(s) 735, 1264, 1924
BssMI GATC 8 cut(s) 115, 121, 326, 553, 845, 1036, 1100, 2320
BssT1I CCWWGG 2 cut(s) 1264, 1924
Bst2UI CCWGG 3 cut(s) 585, 737, 827
Bst4CI ACNGT 7 cut(s) 502, 676, 1090, 1303, 1940, 2253, 2331
Bst6I CTCTTC 5 cut(s) 336, 347, 1224, 1620, 2349
BstAPI GCANNNNNTGC 2 cut(s) 1468, 1651
BstAUI TGTACA 2 cut(s) 706, 2141
BstBI TTCGAA 1 cut(s) 1808
BstC8I GCNNGC 4 cut(s) 776, 1112, 1600, 2019
BstENI CCTNNNNNAGG 1 cut(s) 2383
BstF5I GGATG 8 cut(s) 259, 328, 517, 596, 835, 998, 1231, 1429
BstH2I RGCGCY 1 cut(s) 440
BstHHI GCGC 1 cut(s) 439
BstKTI GATC 8 cut(s) 118, 124, 329, 556, 848, 1039, 1103, 2323
BstMAI GTCTC 6 cut(s) 1002, 1242, 1519, 1542, 2272, 2351
BstMBI GATC 8 cut(s) 115, 121, 326, 553, 845, 1036, 1100, 2320
BstMWI GCNNNNNNNGC 4 cut(s) 38, 1468, 1651, 2128
BstNI CCWGG 3 cut(s) 585, 737, 827
BstNSI RCATGY 2 cut(s) 1471, 2349
BstSCI CCNGG 5 cut(s) 190, 583, 735, 825, 2161
BstSFI CTRYAG 2 cut(s) 765, 779
BstSLI GKGCMC 1 cut(s) 736
BstV1I GCAGC 8 cut(s) 16, 53, 64, 765, 793, 1007, 1126, 2109
BstV2I GAAGAC 5 cut(s) 100, 655, 1748, 2100, 2244
BstX2I RGATCY 4 cut(s) 115, 326, 1036, 2320
BstXI CCANNNNNNTGG 1 cut(s) 1931
BstYI RGATCY 4 cut(s) 115, 326, 1036, 2320
Bsu36I CCTNAGG 1 cut(s) 1003
BsuI GTATCC 1 cut(s) 1878
BsuRI GGCC 3 cut(s) 77, 195, 1923
BtgZI GCGATG 1 cut(s) 1443
BtsCI GGATG 8 cut(s) 259, 328, 517, 596, 835, 998, 1231, 1429
BtsI GCAGTG 1 cut(s) 576
BtsIMutI CAGTG 3 cut(s) 576, 1440, 2062
BveI ACCTGC 1 cut(s) 1854
Cac8I GCNNGC 4 cut(s) 776, 1112, 1600, 2019
CaiI CAGNNNCTG 1 cut(s) 1301
CfoI GCGC 1 cut(s) 439
Cfr13I GGNCC 5 cut(s) 193, 412, 739, 823, 1772
Csp6I GTAC 5 cut(s) 479, 707, 1142, 1751, 2142
CviAII CATG 8 cut(s) 722, 992, 1184, 1463, 1468, 1909, 2275, 2346
CviQI GTAC 5 cut(s) 479, 707, 1142, 1751, 2142
DpnI GATC 8 cut(s) 117, 123, 328, 555, 847, 1038, 1102, 2322
DpnII GATC 8 cut(s) 115, 121, 326, 553, 845, 1036, 1100, 2320
DraI TTTAAA 1 cut(s) 207
DrdI GACNNNNNNGTC 1 cut(s) 913
DriI GACNNNNNGTC 1 cut(s) 1351
DseDI GACNNNNNNGTC 1 cut(s) 913
EaeI YGGCCR 1 cut(s) 1921
Eam1104I CTCTTC 5 cut(s) 336, 347, 1224, 1620, 2349
Eam1105I GACNNNNNGTC 1 cut(s) 1351
EarI CTCTTC 5 cut(s) 336, 347, 1224, 1620, 2349
EciI GGCGGA 1 cut(s) 1030
Ecl136II GAGCTC 1 cut(s) 1020
Eco130I CCWWGG 2 cut(s) 1264, 1924
Eco24I GRGCYC 2 cut(s) 1022, 2379
Eco32I GATATC 1 cut(s) 2428
Eco47I GGWCC 4 cut(s) 412, 739, 823, 1772
Eco53kI GAGCTC 1 cut(s) 1020
Eco57I CTGAAG 7 cut(s) 94, 812, 1299, 1760, 2112, 2256, 2295
Eco81I CCTNAGG 1 cut(s) 1003
Eco88I CYCGRG 1 cut(s) 2287
EcoICRI GAGCTC 1 cut(s) 1020
EcoNI CCTNNNNNAGG 1 cut(s) 2383
EcoO109I RGGNCCY 1 cut(s) 739
EcoRI GAATTC 1 cut(s) 851
EcoRII CCWGG 3 cut(s) 583, 735, 825
EcoRV GATATC 1 cut(s) 2428
EcoT14I CCWWGG 2 cut(s) 1264, 1924
EcoT38I GRGCYC 2 cut(s) 1022, 2379
ErhI CCWWGG 2 cut(s) 1264, 1924
FaeI CATG 8 cut(s) 725, 995, 1187, 1466, 1471, 1912, 2278, 2349
FalI AAGNNNNNCTT 4 cut(s) 677, 709, 904, 936
FaqI GGGAC 2 cut(s) 725, 1490
FatI CATG 8 cut(s) 721, 991, 1183, 1462, 1467, 1908, 2274, 2345
FauI CCCGC 2 cut(s) 587, 1103
FbaI TGATCA 1 cut(s) 553
FblI GTMKAC 1 cut(s) 366
Fnu4HI GCNGC 8 cut(s) 30, 42, 53, 779, 782, 996, 1115, 2123
FokI GGATG 8 cut(s) 246, 335, 524, 603, 842, 985, 1238, 1436
FriOI GRGCYC 2 cut(s) 1022, 2379
Fsp4HI GCNGC 8 cut(s) 30, 42, 53, 779, 782, 996, 1115, 2123
FspBI CTAG 8 cut(s) 35, 197, 1155, 1748, 1799, 1835, 2108, 2449
GlaI GCGC 1 cut(s) 438
GluI GCNGC 8 cut(s) 30, 42, 53, 779, 782, 996, 1115, 2123
GsuI CTGGAG 1 cut(s) 606
HaeII RGCGCY 1 cut(s) 440
HaeIII GGCC 3 cut(s) 77, 195, 1923
HapII CCGG 3 cut(s) 133, 191, 2163
HhaI GCGC 1 cut(s) 439
Hin1II CATG 8 cut(s) 725, 995, 1187, 1466, 1471, 1912, 2278, 2349
Hin6I GCGC 1 cut(s) 437
HinP1I GCGC 1 cut(s) 437
HincII GTYRAC 1 cut(s) 241
HindII GTYRAC 1 cut(s) 241
HindIII AAGCTT 2 cut(s) 233, 1210
HinfI GANTC 7 cut(s) 101, 339, 1175, 1290, 1744, 1805, 1827
HpaII CCGG 3 cut(s) 133, 191, 2163
HphI GGTGA 3 cut(s) 916, 980, 2053
Hpy166II GTNNAC 4 cut(s) 241, 367, 412, 1363
Hpy8I GTNNAC 4 cut(s) 241, 367, 412, 1363
HpyAV CCTTC 5 cut(s) 517, 1863, 2316, 2329, 2389
HpyCH4III ACNGT 7 cut(s) 502, 676, 1090, 1303, 1940, 2253, 2331
HpyCH4IV ACGT 2 cut(s) 429, 1060
HpyCH4V TGCA 9 cut(s) 317, 400, 767, 781, 974, 995, 1082, 1998, 2256
HpyF10VI GCNNNNNNNGC 4 cut(s) 38, 1468, 1651, 2128
HpySE526I ACGT 2 cut(s) 429, 1060
Hsp92II CATG 8 cut(s) 725, 995, 1187, 1466, 1471, 1912, 2278, 2349
HspAI GCGC 1 cut(s) 437
KpnI GGTACC 1 cut(s) 482
Ksp22I TGATCA 1 cut(s) 553
Kzo9I GATC 8 cut(s) 115, 121, 326, 553, 845, 1036, 1100, 2320
LmnI GCTCC 6 cut(s) 38, 135, 586, 1017, 2374, 2448
Lsp1109I GCAGC 8 cut(s) 16, 53, 64, 765, 793, 1007, 1126, 2109
LweI GCATC 4 cut(s) 581, 961, 1007, 1207
MaeI CTAG 8 cut(s) 35, 197, 1155, 1748, 1799, 1835, 2108, 2449
MaeII ACGT 2 cut(s) 429, 1060
MaeIII GTNAC 9 cut(s) 670, 904, 1405, 1453, 1934, 2030, 2059, 2157, 2341
MalI GATC 8 cut(s) 117, 123, 328, 555, 847, 1038, 1102, 2322
MboI GATC 8 cut(s) 115, 121, 326, 553, 845, 1036, 1100, 2320
MfeI CAATTG 2 cut(s) 18, 2042
MflI RGATCY 4 cut(s) 115, 326, 1036, 2320
MhlI GDGCHC 4 cut(s) 576, 736, 1022, 2379
MlsI TGGCCA 1 cut(s) 1923
MluNI TGGCCA 1 cut(s) 1923
MlyI GAGTC 3 cut(s) 333, 1184, 1738
MmeI TCCRAC 3 cut(s) 484, 1075, 1513
Mox20I TGGCCA 1 cut(s) 1923
MroXI GAANNNNTTC 3 cut(s) 177, 855, 1038
MscI TGGCCA 1 cut(s) 1923
MseI TTAA 8 cut(s) 153, 206, 252, 878, 1395, 2189, 2223, 2325
MslI CAYNNNNRTG 2 cut(s) 1313, 1639
Msp20I TGGCCA 1 cut(s) 1923
MspI CCGG 3 cut(s) 133, 191, 2163
MspR9I CCNGG 5 cut(s) 192, 585, 737, 827, 2163
MunI CAATTG 2 cut(s) 18, 2042
Mva1269I GAATGC 1 cut(s) 1256
MvaI CCWGG 3 cut(s) 585, 737, 827
MwoI GCNNNNNNNGC 4 cut(s) 38, 1468, 1651, 2128
NciI CCSGG 2 cut(s) 192, 2163
NdeII GATC 8 cut(s) 115, 121, 326, 553, 845, 1036, 1100, 2320
NlaIII CATG 8 cut(s) 725, 995, 1187, 1466, 1471, 1912, 2278, 2349
NlaIV GGNNCC 7 cut(s) 480, 733, 741, 1506, 2177, 2376, 2444
NmuCI GTSAC 5 cut(s) 904, 1405, 2030, 2059, 2341
NspI RCATGY 2 cut(s) 1471, 2349
NspV TTCGAA 1 cut(s) 1808
PaeR7I CTCGAG 1 cut(s) 2287
PciI ACATGT 1 cut(s) 2345
PctI GAATGC 1 cut(s) 1256
PdmI GAANNNNTTC 3 cut(s) 177, 855, 1038
PfeI GAWTC 4 cut(s) 101, 1290, 1805, 1827
PflMI CCANNNNNTGG 1 cut(s) 932
PfoI TCCNGGA 2 cut(s) 583, 825
PkrI GCNGC 8 cut(s) 31, 43, 54, 780, 783, 997, 1116, 2124
PleI GAGTC 3 cut(s) 333, 1183, 1738
PpsI GAGTC 3 cut(s) 333, 1183, 1738
PpuMI RGGWCCY 1 cut(s) 739
PscI ACATGT 1 cut(s) 2345
PsiI TTATAA 1 cut(s) 71
Psp124BI GAGCTC 1 cut(s) 1022
Psp1406I AACGTT 1 cut(s) 1060
Psp5II RGGWCCY 1 cut(s) 739
Psp6I CCWGG 3 cut(s) 583, 735, 825
PspGI CCWGG 3 cut(s) 583, 735, 825
PspN4I GGNNCC 7 cut(s) 480, 733, 741, 1506, 2177, 2376, 2444
PspPI GGNCC 5 cut(s) 193, 412, 739, 823, 1772
PspPPI RGGWCCY 1 cut(s) 739
PstI CTGCAG 2 cut(s) 769, 783
PstNI CAGNNNCTG 1 cut(s) 1301
PsuI RGATCY 4 cut(s) 115, 326, 1036, 2320
RsaI GTAC 5 cut(s) 480, 708, 1143, 1752, 2143
RsaNI GTAC 5 cut(s) 479, 707, 1142, 1751, 2142
RseI CAYNNNNRTG 2 cut(s) 1313, 1639
SacI GAGCTC 1 cut(s) 1022
SaqAI TTAA 8 cut(s) 153, 206, 252, 878, 1395, 2189, 2223, 2325
SatI GCNGC 8 cut(s) 30, 42, 53, 779, 782, 996, 1115, 2123
Sau3AI GATC 8 cut(s) 115, 121, 326, 553, 845, 1036, 1100, 2320
Sau96I GGNCC 5 cut(s) 193, 412, 739, 823, 1772
ScaI AGTACT 2 cut(s) 1143, 1752
SchI GAGTC 3 cut(s) 333, 1184, 1738
ScrFI CCNGG 5 cut(s) 192, 585, 737, 827, 2163
SduI GDGCHC 4 cut(s) 576, 736, 1022, 2379
SfaNI GCATC 4 cut(s) 581, 961, 1007, 1207
SfcI CTRYAG 2 cut(s) 765, 779
Sfr274I CTCGAG 1 cut(s) 2287
SfuI TTCGAA 1 cut(s) 1808
SinI GGWCC 4 cut(s) 412, 739, 823, 1772
SlaI CTCGAG 1 cut(s) 2287
SmiMI CAYNNNNRTG 2 cut(s) 1313, 1639
SmlI CTYRAG 4 cut(s) 860, 1172, 2180, 2287
SmoI CTYRAG 4 cut(s) 860, 1172, 2180, 2287
SpeI ACTAGT 1 cut(s) 1798
SsiI CCGC 3 cut(s) 594, 1015, 1110
SspI AATATT 3 cut(s) 256, 274, 1987
SspMI CTAG 8 cut(s) 35, 197, 1155, 1748, 1799, 1835, 2108, 2449
SstI GAGCTC 1 cut(s) 1022
StyD4I CCNGG 5 cut(s) 190, 583, 735, 825, 2161
StyI CCWWGG 2 cut(s) 1264, 1924
TaaI ACNGT 7 cut(s) 502, 676, 1090, 1303, 1940, 2253, 2331
TaiI ACGT 2 cut(s) 432, 1063
TaqI TCGA 6 cut(s) 120, 625, 639, 1808, 2168, 2288
TaqII GACCGA 2 cut(s) 429, 1760
TatI WGTACW 4 cut(s) 706, 1141, 1750, 2141
TfiI GAWTC 4 cut(s) 101, 1290, 1805, 1827
Tru1I TTAA 8 cut(s) 153, 206, 252, 878, 1395, 2189, 2223, 2325
Tru9I TTAA 8 cut(s) 153, 206, 252, 878, 1395, 2189, 2223, 2325
TscAI CASTG 3 cut(s) 583, 1447, 2062
TseFI GTSAC 5 cut(s) 904, 1405, 2030, 2059, 2341
TseI GCWGC 8 cut(s) 29, 41, 52, 778, 781, 995, 1114, 2122
Tsp45I GTSAC 5 cut(s) 904, 1405, 2030, 2059, 2341
TspGWI ACGGA 2 cut(s) 94, 480
TspRI CASTG 3 cut(s) 583, 1447, 2062
Van91I CCANNNNNTGG 1 cut(s) 932
VpaK11BI GGWCC 4 cut(s) 412, 739, 823, 1772
XagI CCTNNNNNAGG 1 cut(s) 2383
XapI RAATTY 5 cut(s) 175, 647, 851, 1842, 2113
XbaI TCTAGA 1 cut(s) 1154
XceI RCATGY 2 cut(s) 1471, 2349
XcmI CCANNNNNNNNNTGG 1 cut(s) 1125
XhoI CTCGAG 1 cut(s) 2287
XmiI GTMKAC 1 cut(s) 366
XmnI GAANNNNTTC 3 cut(s) 177, 855, 1038
XspI CTAG 8 cut(s) 35, 197, 1155, 1748, 1799, 1835, 2108, 2449
ZrmI AGTACT 2 cut(s) 1143, 1752
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.