Rh2DG176300

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0000039
Physical Location & Seq
Forward (+)
15474366 .. 15482045
7680 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG176300.1

Sequence Viewer

Length: 2835 bp
ATGGCCAAGCAGACGGTGCTTGCAATTATAAGGCCAGTGGCCACTGACCCTGTATGGTGGCTGACGGCGGCAGTCTGGTTTGCTGGAGGTGCAGCGCTGAGGAATCGATCATGGCAACGGAGGGGTTCCCAGGCCCAAAGCATAGCAACTCTGGAGTTTCAATCTACAAAGATCGAATTCCGATTTGATGGTGGCACAACGGGCAAGGCCTCGACGGTGGCTGCAGACAGTCTGAAGGGAGCAGCGGTGGTCCTGATGAAAGCTGAGATTGTGGTGGTTGAGAATGGGTGGCTGCAGACAATCCTTCTTGTTTCACTGGTTCAACCTTTTCTGGGACGCATTGATTTGGATTTTCGTCTTGAACCATCATCACCACAAATGGTATTAGTCAGAGGAGAAGCTTTAGAAGCATCATTTGTGGCACTGTATGATGCCATTAAGGAAGTAAATGAACATCATTTGATGTTTAAAGCCCTCCTTGGAGATATCAGATCTACACTAGATTCTATAGAACCACTGATCAAAGAGACTGCAGAGGATGACAAGGAGTTGGATTTTCCAGAGGATGAACTTCAGAATTTTGGAGTACAAATGGAAGAGGGGATTGAGCTAATTCGTAAGTGCTCTAAGGTTGGTCCATTGAGTACTTACAAAAAATATAAATACACAAACAAACTAGGTGAACTGGGAAAATCTTTGCAAAGACTGTTGGATATACTGAAAGTGCATAGCATAAGAGATGTGAAGAAAACCTTGGTTACCGTCAAGAATATTGAGACTAAGGTCCAGCAACTTGATGTGAATATTGGGATACAAAATAATTCACCTGAAAGTATTGAAGGTTCATGGGCAATACCTGAACCTCCACCACTTGTAGTTGGATTGGATGGGCCTTTGAAGGAATTGAAGATGAAGCTTTTCAGTGATGAGATATCAATGCTTGTGCTAACTGCTCCTGGAGGATGTGGGAAAACTACATTGGCAACGAAGTTTTGTCAAGATGGAGACGTCAGAGATAAATTCAAGAACAATATCTTCTTTGTAACTGTTTCCAAGAAGCCCAACTTAAACCTTATTGTAGAAGAGCTATATCAACGCAAGGGTTCCCAGGTACCCGATTTCCAACATGAAGTAATTGCACTTAATTGGCTGCACGAATTTCTAAACCAAATGGGACAAGATCCTTTACTATTGGTTTTGGATGATGTTTGGTCTGAATCTGAATTTCTTCTTGAGAAGTTTGATGAATGGAGAATGTCTAACTGCAAGATCTTGGTGACATCAAGGTTTACATTTCCAAGATTTGGTTCTCCATATACTTTGAAATCATTGAGTGATGAAGATGCATTTGCTCTTTTTAATCATTCAGCATACTTGGGAGATGTTCGCTCTCATGTTCCAGAAGACCTTGCAAGACAGGTAATAAAACATTGTAAAGGATTTCCTCTTGCAATTACAGTGGTTGGAAGATCACTTTGTGGGCAGCCTATAGAGATCTGGCAAAAAAGATTAATTGAATGGACTAAAGGTTCATCTATTCTTGATTCTGATCATGATTTGCTTGTTTGCCTCCAAAGCAGCCTTGATGCCTTGGAGAAACAAAGTATTACCATCAAGGAATGTTTCCTAGACCTTGGTTCATTTCCAGAAGACCAAAGAATACCTGCTACTACCCTCATTGATATATGGGCGGAGTCATATAAAATAGATGAAGACTGGCTTTGCATTGCAAACCTCTGTGAACTCACCAATAGAAATCTGGCTACTCTTATAATCACAAGGAAGGACCCCATGGAGGTGGATGGCTATTACAGTGAACATTTTGTTACTCTGCATGACATTATTAGAGAATTGGCTATCTATCAGTCAAGTGTGGAATCAATAGAACAGAGAAAAAGGCTGATAATAGATATGTCTGGAGACAATTTTCCCGAGTGGTGGACGGAACAGAAATGTCAACCCATCAATGCTCACCTTTTATCTATCTCGACAGATGGAGACTTCTCATCTAAATGGCTCAACATGCAACTACCACAAGCAGAGGTTCTAATTCTGAACTTTCAGTCAAAGAAGTATGCCTTACCCGAATTTGTGGAGAAAATGGACAAATTAAAGGTTCTGATAGTCACAAAATACGGTCTTTTACCTGCTGAATTGGATAACTTTCCATTACTTGGTTCATTATCAAATCTAAAGAGAATTAGATTAGAACGAATAGCAATACCTTCCATGAGCAAGACCCCTGTACAGTTGAAGAGTTTAGAAAAGATATCATTATTCATGTGCAAAGTGGGTCAAGCCTTTGACAACTGTTCCATCGAACTTTTTAATCTATTGCCAAATGTAGTGGAAATGAACATTGATTACTGCAATGATTTGGTGAAATTGCCCGCCATGCTTTGTGACCTGATTTGCCTGAAAAAGCTTAGTATCACCAATTCTCACAAGCTATCTGTCTTACCTGAAGAAATAGGAAAGTTAGTGAACTTAAAAGTGTTGAGGCTTAGGTCTTGTACTGAATTGTCGGAGCTGCCAGACTCAATTCGGAACCTCAAATTGTTAAATTTTCTGGACATTTCTGATTGCTTTAGTATGAAGGAGCTTCCTGAACATATTGGTGAAATGTGCAGCTTAGAAACGCTAAATATGAGACAATGCTCAAGACTGCAAGAGTTGCCTGCATCAGTTTTGGATCTTGAACAGTTGAAGGATGTGATTTGTGATGAAGAGACTGAAATATTATGGAACCCCTTCTTACCCATTCTCCACAACTTACATATCAGGGTAGTGAAAGAAGATATTAACCTGAATTGGCTCCACACGTTTCCATCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
NB-ARC RPW8

Protein Analysis

944

Amino Acids

107.15

Weight (kDa)

5.27

Isoelectric Point (pI)

46.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RPW8 PF05659 129 - 263 3.8e-24 Arabidopsis broad-spectrum mildew resistance protein RPW8
NB-ARC PF00931 298 - 457 5.5e-16 NB-ARC domain
LRR_14 PF23598 800 - 861 7.7e-08 Leucine-rich repeat region
LRR_14 PF23598 850 - 913 1.1e-07 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 29, 1772
AatII GACGTC 1 cut(s) 1011
Acc36I ACCTGC 2 cut(s) 1672, 2155
Acc65I GGTACC 1 cut(s) 1111
AccB1I GGYRCC 1 cut(s) 1111
AccB7I CCANNNNNTGG 2 cut(s) 1304, 2174
AciI CCGC 4 cut(s) 68, 245, 1691, 2391
AclWI GGATC 2 cut(s) 1175, 2700
AcoI YGGCCR 2 cut(s) 3, 39
AcsI RAATTY 7 cut(s) 176, 577, 1019, 1157, 1223, 2087, 2563
AcuI CTGAAG 3 cut(s) 254, 557, 2484
AcyI GRCGYC 1 cut(s) 1008
AdeI CACNNNGTG 1 cut(s) 1478
AfaI GTAC 5 cut(s) 588, 646, 1113, 2247, 2515
AfeI AGCGCT 1 cut(s) 96
AfiI CCNNNNNNNGG 5 cut(s) 332, 1304, 1795, 1938, 2174
AflIII ACRYGT 1 cut(s) 2820
AjnI CCWGG 3 cut(s) 129, 955, 1107
AjuI GAANNNNNNNTTGG 6 cut(s) 737, 769, 962, 994, 1291, 1323
AloI GAACNNNNNNTCC 2 cut(s) 1513, 1545
Alw21I GWGCWC 1 cut(s) 626
Alw26I GTCTC 7 cut(s) 521, 770, 999, 1914, 1992, 2644, 2723
AlwI GGATC 2 cut(s) 1175, 2700
Ama87I CYCGRG 1 cut(s) 1931
Aor51HI AGCGCT 1 cut(s) 96
AoxI GGCC 6 cut(s) 3, 32, 39, 132, 207, 890
ApeKI GCWGC 9 cut(s) 92, 221, 242, 292, 1150, 1483, 1578, 2530, 2628
ApoI RAATTY 7 cut(s) 176, 577, 1019, 1157, 1223, 2087, 2563
AseI ATTAAT 1 cut(s) 1511
Asp700I GAANNNNTTC 3 cut(s) 917, 1227, 2750
Asp718I GGTACC 1 cut(s) 1111
AspLEI GCGC 1 cut(s) 97
AspS9I GGNCC 6 cut(s) 133, 250, 635, 784, 890, 1786
AsuHPI GGTGA 9 cut(s) 363, 692, 816, 1288, 1738, 1964, 2392, 2425, 2630
AvaI CYCGRG 1 cut(s) 1931
AvaII GGWCC 4 cut(s) 250, 635, 784, 1786
BalI TGGCCA 2 cut(s) 5, 41
BanI GGYRCC 1 cut(s) 1111
BbsI GAAGAC 3 cut(s) 1410, 1656, 1719
Bbv12I GWGCWC 1 cut(s) 626
BbvCI CCTCAGC 1 cut(s) 98
BbvI GCAGC 9 cut(s) 104, 208, 254, 279, 1137, 1495, 1590, 2517, 2640
BccI CCATC 9 cut(s) 182, 373, 881, 995, 1619, 1796, 1970, 1988, 2324
BceAI ACGGC 1 cut(s) 81
BciT130I CCWGG 3 cut(s) 131, 957, 1109
BciVI GTATCC 1 cut(s) 804
BclI TGATCA 2 cut(s) 519, 1549
BcoDI GTCTC 7 cut(s) 521, 770, 999, 1914, 1992, 2644, 2723
BfaI CTAG 3 cut(s) 500, 677, 1628
BfmI CTRYAG 5 cut(s) 222, 293, 507, 531, 1488
BfoI RGCGCY 1 cut(s) 98
BfuAI ACCTGC 2 cut(s) 1672, 2155
BfuI GTATCC 1 cut(s) 804
BglII AGATCT 3 cut(s) 491, 1269, 1494
BmcAI AGTACT 1 cut(s) 646
Bme1390I CCNGG 3 cut(s) 131, 957, 1109
Bme18I GGWCC 4 cut(s) 250, 635, 784, 1786
BmeT110I CYCGRG 1 cut(s) 1931
BmgT120I GGNCC 6 cut(s) 133, 250, 635, 784, 890, 1786
BmiI GGNNCC 7 cut(s) 127, 1105, 1113, 1788, 2549, 2747, 2816
BmrFI CCNGG 3 cut(s) 131, 957, 1109
BmrI ACTGGG 1 cut(s) 695
BmsI GCATC 5 cut(s) 419, 421, 1333, 1576, 2690
BmuI ACTGGG 1 cut(s) 695
BoxI GACNNNNGTC 1 cut(s) 782
BpiI GAAGAC 3 cut(s) 1410, 1656, 1719
BpmI CTGGAG 4 cut(s) 105, 173, 978, 1938
Bpu10I CCTNAGC 2 cut(s) 98, 2504
BpuEI CTTGAG 2 cut(s) 1253, 2644
Bsa29I ATCGAT 1 cut(s) 106
BsaBI GATNNNNATC 1 cut(s) 1548
BsaHI GRCGYC 1 cut(s) 1008
BsaJI CCNNGG 7 cut(s) 129, 478, 753, 1107, 1590, 1633, 1791
BsaXI ACNNNNNCTCC 4 cut(s) 231, 261, 2748, 2778
Bsc4I CCNNNNNNNGG 5 cut(s) 332, 1304, 1795, 1938, 2174
Bse1I ACTGG 4 cut(s) 35, 321, 690, 1721
Bse3DI GCAATG 2 cut(s) 1725, 2377
Bse8I GATNNNNATC 1 cut(s) 1548
BseBI CCWGG 3 cut(s) 131, 957, 1109
BseCI ATCGAT 1 cut(s) 106
BseDI CCNNGG 7 cut(s) 129, 478, 753, 1107, 1590, 1633, 1791
BseGI GGATG 7 cut(s) 544, 571, 892, 968, 1207, 1807, 2716
BseJI GATNNNNATC 1 cut(s) 1548
BseLI CCNNNNNNNGG 5 cut(s) 332, 1304, 1795, 1938, 2174
BseMI GCAATG 2 cut(s) 1725, 2377
BseMII CTCAG 2 cut(s) 89, 255
BseNI ACTGG 4 cut(s) 35, 321, 690, 1721
BseRI GAGGAG 1 cut(s) 408
BseXI GCAGC 9 cut(s) 104, 208, 254, 279, 1137, 1495, 1590, 2517, 2640
BsgI GTGCAG 3 cut(s) 111, 1136, 2647
BshFI GGCC 6 cut(s) 5, 34, 41, 134, 209, 892
BshNI GGYRCC 1 cut(s) 1111
BshVI ATCGAT 1 cut(s) 106
BsiHKAI GWGCWC 1 cut(s) 626
BsiHKCI CYCGRG 1 cut(s) 1931
BslFI GGGAC 2 cut(s) 348, 1188
BslI CCNNNNNNNGG 5 cut(s) 332, 1304, 1795, 1938, 2174
BsmAI GTCTC 7 cut(s) 521, 770, 999, 1914, 1992, 2644, 2723
BsmBI CGTCTC 1 cut(s) 999
BsmFI GGGAC 2 cut(s) 348, 1188
BsnI GGCC 6 cut(s) 5, 34, 41, 134, 209, 892
BsoBI CYCGRG 1 cut(s) 1931
Bsp1286I GDGCHC 1 cut(s) 626
Bsp1407I TGTACA 1 cut(s) 2245
Bsp19I CCATGG 1 cut(s) 1791
BspACI CCGC 4 cut(s) 68, 245, 1691, 2391
BspANI GGCC 6 cut(s) 5, 34, 41, 134, 209, 892
BspCNI CTCAG 2 cut(s) 90, 256
BspDI ATCGAT 1 cut(s) 106
BspHI TCATGA 1 cut(s) 1552
BspLI GGNNCC 7 cut(s) 127, 1105, 1113, 1788, 2549, 2747, 2816
BspMAI CTGCAG 3 cut(s) 226, 297, 535
BspMI ACCTGC 2 cut(s) 1672, 2155
BspPI GGATC 2 cut(s) 1175, 2700
BspQI GCTCTTC 1 cut(s) 1077
BspT107I GGYRCC 1 cut(s) 1111
BsrDI GCAATG 2 cut(s) 1725, 2377
BsrGI TGTACA 1 cut(s) 2245
BsrI ACTGG 4 cut(s) 35, 321, 690, 1721
BssECI CCNNGG 7 cut(s) 129, 478, 753, 1107, 1590, 1633, 1791
BssNI GRCGYC 1 cut(s) 1008
BssT1I CCWWGG 5 cut(s) 478, 753, 1590, 1633, 1791
Bst2UI CCWGG 3 cut(s) 131, 957, 1109
Bst6I CTCTTC 4 cut(s) 591, 1077, 2249, 2721
BstACI GRCGYC 1 cut(s) 1008
BstAPI GCANNNNNTGC 2 cut(s) 16, 2674
BstAUI TGTACA 1 cut(s) 2245
BstC8I GCNNGC 3 cut(s) 21, 2391, 2679
BstDEI CTNAG 7 cut(s) 98, 264, 627, 780, 2426, 2504, 2632
BstDSI CCRYGG 1 cut(s) 1791
BstEII GGTNACC 1 cut(s) 757
BstF5I GGATG 7 cut(s) 544, 571, 892, 968, 1207, 1807, 2716
BstH2I RGCGCY 1 cut(s) 98
BstHHI GCGC 1 cut(s) 97
BstMAI GTCTC 7 cut(s) 521, 770, 999, 1914, 1992, 2644, 2723
BstMWI GCNNNNNNNGC 8 cut(s) 16, 89, 201, 407, 1575, 2023, 2395, 2674
BstNI CCWGG 3 cut(s) 131, 957, 1109
BstNSI RCATGY 1 cut(s) 2026
BstPAI GACNNNNGTC 1 cut(s) 782
BstPI GGTNACC 1 cut(s) 757
BstSCI CCNGG 3 cut(s) 129, 955, 1107
BstSFI CTRYAG 5 cut(s) 222, 293, 507, 531, 1488
BstV1I GCAGC 9 cut(s) 104, 208, 254, 279, 1137, 1495, 1590, 2517, 2640
BstV2I GAAGAC 3 cut(s) 1410, 1656, 1719
BstX2I RGATCY 5 cut(s) 491, 1180, 1269, 1494, 2692
BstXI CCANNNNNNTGG 1 cut(s) 1798
BstYI RGATCY 5 cut(s) 491, 1180, 1269, 1494, 2692
Bsu15I ATCGAT 1 cut(s) 106
BsuI GTATCC 1 cut(s) 804
BsuRI GGCC 6 cut(s) 5, 34, 41, 134, 209, 892
BsuTUI ATCGAT 1 cut(s) 106
BtgI CCRYGG 1 cut(s) 1791
BtsCI GGATG 7 cut(s) 544, 571, 892, 968, 1207, 1807, 2716
BtsIMutI CAGTG 8 cut(s) 42, 42, 314, 422, 515, 928, 1464, 1819
BveI ACCTGC 2 cut(s) 1672, 2155
Cac8I GCNNGC 3 cut(s) 21, 2391, 2679
CciI TCATGA 1 cut(s) 1552
CfoI GCGC 1 cut(s) 97
Cfr13I GGNCC 6 cut(s) 133, 250, 635, 784, 890, 1786
ClaI ATCGAT 1 cut(s) 106
CseI GACGC 1 cut(s) 345
Csp6I GTAC 5 cut(s) 587, 645, 1112, 2246, 2514
CspCI CAANNNNNGTGG 4 cut(s) 1440, 1475, 2328, 2363
CviQI GTAC 5 cut(s) 587, 645, 1112, 2246, 2514
DdeI CTNAG 7 cut(s) 98, 264, 627, 780, 2426, 2504, 2632
DraI TTTAAA 1 cut(s) 469
DraIII CACNNNGTG 1 cut(s) 1478
EaeI YGGCCR 2 cut(s) 3, 39
Eam1104I CTCTTC 4 cut(s) 591, 1077, 2249, 2721
EarI CTCTTC 4 cut(s) 591, 1077, 2249, 2721
EciI GGCGGA 1 cut(s) 1706
Eco130I CCWWGG 5 cut(s) 478, 753, 1590, 1633, 1791
Eco147I AGGCCT 1 cut(s) 209
Eco32I GATATC 3 cut(s) 487, 933, 2271
Eco47I GGWCC 4 cut(s) 250, 635, 784, 1786
Eco47III AGCGCT 1 cut(s) 96
Eco57I CTGAAG 3 cut(s) 254, 557, 2484
Eco88I CYCGRG 1 cut(s) 1931
Eco91I GGTNACC 1 cut(s) 757
EcoO109I RGGNCCY 1 cut(s) 1786
EcoO65I GGTNACC 1 cut(s) 757
EcoRI GAATTC 1 cut(s) 176
EcoRII CCWGG 3 cut(s) 129, 955, 1107
EcoRV GATATC 3 cut(s) 487, 933, 2271
EcoT14I CCWWGG 5 cut(s) 478, 753, 1590, 1633, 1791
EcoT22I ATGCAT 1 cut(s) 1348
ErhI CCWWGG 5 cut(s) 478, 753, 1590, 1633, 1791
Esp3I CGTCTC 1 cut(s) 999
FaqI GGGAC 2 cut(s) 348, 1188
FauI CCCGC 1 cut(s) 2398
FbaI TGATCA 2 cut(s) 519, 1549
FokI GGATG 7 cut(s) 551, 578, 899, 975, 1214, 1814, 2723
FspBI CTAG 3 cut(s) 500, 677, 1628
GlaI GCGC 1 cut(s) 96
GsuI CTGGAG 4 cut(s) 105, 173, 978, 1938
HaeII RGCGCY 1 cut(s) 98
HaeIII GGCC 6 cut(s) 5, 34, 41, 134, 209, 892
HgaI GACGC 1 cut(s) 345
HhaI GCGC 1 cut(s) 97
Hin1I GRCGYC 1 cut(s) 1008
Hin6I GCGC 1 cut(s) 95
HinP1I GCGC 1 cut(s) 95
HincII GTYRAC 1 cut(s) 1958
HindII GTYRAC 1 cut(s) 1958
HindIII AAGCTT 3 cut(s) 399, 914, 2423
HinfI GANTC 7 cut(s) 103, 503, 1217, 1544, 1694, 1877, 2537
HphI GGTGA 9 cut(s) 363, 692, 816, 1288, 1738, 1964, 2392, 2425, 2630
Hpy166II GTNNAC 7 cut(s) 683, 1290, 1742, 1817, 1941, 1958, 2485
Hpy8I GTNNAC 7 cut(s) 683, 1290, 1742, 1817, 1941, 1958, 2485
Hpy99I CGWCG 1 cut(s) 217
HpyAV CCTTC 9 cut(s) 229, 314, 833, 892, 1777, 2235, 2590, 2701, 2761
HpyCH4IV ACGT 2 cut(s) 1008, 2822
HpyF10VI GCNNNNNNNGC 8 cut(s) 16, 89, 201, 407, 1575, 2023, 2395, 2674
HpyF3I CTNAG 7 cut(s) 98, 264, 627, 780, 2426, 2504, 2632
HpySE526I ACGT 2 cut(s) 1008, 2822
Hsp92I GRCGYC 1 cut(s) 1008
HspAI GCGC 1 cut(s) 95
KpnI GGTACC 1 cut(s) 1115
Ksp22I TGATCA 2 cut(s) 519, 1549
LguI GCTCTTC 1 cut(s) 1077
LmnI GCTCC 5 cut(s) 239, 958, 2527, 2599, 2820
Lsp1109I GCAGC 9 cut(s) 104, 208, 254, 279, 1137, 1495, 1590, 2517, 2640
LweI GCATC 5 cut(s) 419, 421, 1333, 1576, 2690
MaeI CTAG 3 cut(s) 500, 677, 1628
MaeII ACGT 2 cut(s) 1008, 2822
MaeIII GTNAC 6 cut(s) 757, 1042, 1276, 1825, 2125, 2402
MflI RGATCY 5 cut(s) 491, 1180, 1269, 1494, 2692
MhlI GDGCHC 1 cut(s) 626
MlsI TGGCCA 2 cut(s) 5, 41
MluNI TGGCCA 2 cut(s) 5, 41
MlyI GAGTC 2 cut(s) 1703, 2531
MmeI TCCRAC 6 cut(s) 531, 690, 859, 1147, 1444, 2505
Mox20I TGGCCA 2 cut(s) 5, 41
Mph1103I ATGCAT 1 cut(s) 1348
MroXI GAANNNNTTC 3 cut(s) 917, 1227, 2750
MscI TGGCCA 2 cut(s) 5, 41
MslI CAYNNNNRTG 3 cut(s) 1796, 2011, 2616
Msp20I TGGCCA 2 cut(s) 5, 41
MspA1I CMGCKG 1 cut(s) 245
MspR9I CCNGG 3 cut(s) 131, 957, 1109
MvaI CCWGG 3 cut(s) 131, 957, 1109
MwoI GCNNNNNNNGC 8 cut(s) 16, 89, 201, 407, 1575, 2023, 2395, 2674
NcoI CCATGG 1 cut(s) 1791
NlaIV GGNNCC 7 cut(s) 127, 1105, 1113, 1788, 2549, 2747, 2816
NmuCI GTSAC 3 cut(s) 1276, 2125, 2402
NsiI ATGCAT 1 cut(s) 1348
NspI RCATGY 1 cut(s) 2026
PagI TCATGA 1 cut(s) 1552
PceI AGGCCT 1 cut(s) 209
PciSI GCTCTTC 1 cut(s) 1077
PdmI GAANNNNTTC 3 cut(s) 917, 1227, 2750
PfeI GAWTC 5 cut(s) 103, 503, 1217, 1544, 1877
PflMI CCANNNNNTGG 2 cut(s) 1304, 2174
PfoI TCCNGGA 1 cut(s) 955
PleI GAGTC 2 cut(s) 1702, 2531
PpsI GAGTC 2 cut(s) 1702, 2531
PpuMI RGGWCCY 1 cut(s) 1786
PshAI GACNNNNGTC 1 cut(s) 782
PshBI ATTAAT 1 cut(s) 1511
PsiI TTATAA 2 cut(s) 29, 1772
Psp5II RGGWCCY 1 cut(s) 1786
Psp6I CCWGG 3 cut(s) 129, 955, 1107
PspEI GGTNACC 1 cut(s) 757
PspGI CCWGG 3 cut(s) 129, 955, 1107
PspN4I GGNNCC 7 cut(s) 127, 1105, 1113, 1788, 2549, 2747, 2816
PspPI GGNCC 6 cut(s) 133, 250, 635, 784, 890, 1786
PspPPI RGGWCCY 1 cut(s) 1786
PsrI GAACNNNNNNTAC 4 cut(s) 826, 858, 2348, 2380
PstI CTGCAG 3 cut(s) 226, 297, 535
PsuI RGATCY 5 cut(s) 491, 1180, 1269, 1494, 2692
RsaI GTAC 5 cut(s) 588, 646, 1113, 2247, 2515
RsaNI GTAC 5 cut(s) 587, 645, 1112, 2246, 2514
RseI CAYNNNNRTG 3 cut(s) 1796, 2011, 2616
SapI GCTCTTC 1 cut(s) 1077
Sau96I GGNCC 6 cut(s) 133, 250, 635, 784, 890, 1786
ScaI AGTACT 1 cut(s) 646
SchI GAGTC 2 cut(s) 1703, 2531
ScrFI CCNGG 3 cut(s) 131, 957, 1109
SduI GDGCHC 1 cut(s) 626
SfaNI GCATC 5 cut(s) 419, 421, 1333, 1576, 2690
SfcI CTRYAG 5 cut(s) 222, 293, 507, 531, 1488
SinI GGWCC 4 cut(s) 250, 635, 784, 1786
SmiMI CAYNNNNRTG 3 cut(s) 1796, 2011, 2616
SmlI CTYRAG 2 cut(s) 1232, 2659
SmoI CTYRAG 2 cut(s) 1232, 2659
SseBI AGGCCT 1 cut(s) 209
SsiI CCGC 4 cut(s) 68, 245, 1691, 2391
SspI AATATT 3 cut(s) 772, 805, 2739
SspMI CTAG 3 cut(s) 500, 677, 1628
StuI AGGCCT 1 cut(s) 209
StyD4I CCNGG 3 cut(s) 129, 955, 1107
StyI CCWWGG 5 cut(s) 478, 753, 1590, 1633, 1791
TaiI ACGT 2 cut(s) 1011, 2825
TaqI TCGA 5 cut(s) 106, 174, 212, 1988, 2319
TatI WGTACW 4 cut(s) 586, 644, 2245, 2513
TauI GCSGC 1 cut(s) 71
TfiI GAWTC 5 cut(s) 103, 503, 1217, 1544, 1877
TscAI CASTG 8 cut(s) 42, 49, 321, 429, 522, 928, 1464, 1819
TseFI GTSAC 3 cut(s) 1276, 2125, 2402
TseI GCWGC 9 cut(s) 92, 221, 242, 292, 1150, 1483, 1578, 2530, 2628
Tsp45I GTSAC 3 cut(s) 1276, 2125, 2402
TspGWI ACGGA 2 cut(s) 133, 1958
TspRI CASTG 8 cut(s) 42, 49, 321, 429, 522, 928, 1464, 1819
Van91I CCANNNNNTGG 2 cut(s) 1304, 2174
VpaK11BI GGWCC 4 cut(s) 250, 635, 784, 1786
VspI ATTAAT 1 cut(s) 1511
XapI RAATTY 7 cut(s) 176, 577, 1019, 1157, 1223, 2087, 2563
XceI RCATGY 1 cut(s) 2026
XcmI CCANNNNNNNNNTGG 1 cut(s) 1756
XmnI GAANNNNTTC 3 cut(s) 917, 1227, 2750
XspI CTAG 3 cut(s) 500, 677, 1628
ZraI GACGTC 1 cut(s) 1009
ZrmI AGTACT 1 cut(s) 646
Zsp2I ATGCAT 1 cut(s) 1348
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.