RchiOBHm_Chr2g0104391

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000039
Physical Location & Seq
Forward (+)
15763796 .. 15767555
3760 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ47866

Sequence Viewer

Length: 2364 bp
ATGTTCAAACCCCAACTCGGGGATATCAAGTCCACTCTGGACTCCTTGCAGCCACTGATCAAGGAGATGGCAGAGTGTGAGAAGGAACTGGATGGTCCAGAGGAGGAGCTAGAGAATCTTAGAGTGGAAATGGAGGGAGGAGTGGAGCTTATTCGCAAGTGCTCGAAAGCGAGCAGGTTCAAGCAGTATAAGTACGGCAGCAGGCTTGTTGAATTGAGCAAGTCACTTCAGAGGCTGTTGGGGATATTGAAAGTGCAGGGGATAAGGGATGTGAAGAAGGCATTGGTTTCGGTGAGGAACGTTGAGAATGTGCTGCACAGAATTGAAGGGAATTGTGTGATACAGAACAATCAGTCTGAAAAAAATGAAGGGTGGTGTGCTGTGCCTGAGCCTCCAACAATTACGGTTGGATTGGATTTGCCTTTGAGGGAATTGAAGATGAAGCTCTTTAAGGACGGAGTGTCGATGGTGATACTTACTGCTCCAGGAGGATGCGGGAAAACTACATTGGCAACAAAGTTATGTCAAGATGCAGAAGTCAAAGATAAATTCAAAAGCAATGTCTTCTTTGTTACTGTTTCAAAGAAGCCCAACTTGTACCTAATTGTAAAAGAGCTATATCATCGAACGGGTGCCCAGGTCCCCGATTTCCAAAGTGAAGTAACTTCAGTTAGCTGGCTGCAGAAATTTCTGAAGCAAACAGGTCAAAATCCTATGTTGTTGGTCCTGGATGATGTTTGGGCTGGATCAGAATTCATTCTTGAGAAGTTCGATGAATTAAAAATGACAAATTACAAGATATTGGTGACATCAAGGTCTGCTTTTCCAAGATTTGGTTCTCCATATTTTTTGGAATGTTTGAACCGCGAAGATGCAATGGCACTTTTTCACCATGCAGCATCCTTAGGTGATAGGAGCTCTTATATTTCTGAAGATCTTCCGAGAAAGATAGTAGAACGTTGTATGGGATATCCACTTGCAATTACAGTTGTCGGAAGATCACTTTGCGGGCAGCCAATAGAGATTTGGCAAAAAAGAGTGTTGGAATGGTCTAGAGGTTCTTCTGTTCTTAAGTCTGAACATGATTTGCTTGATTGCCTCCAAAGAAGCTTAGATGCTTTGGATGAAGAGAAGTCTCTTATCAGGGAATGCTTCATAGACCTTGGTTTATTTCCTGAAGATAAAAGAATCTCAGCTACTGTCCTCATTGATATGTGGGCAGAGGTATATGGCATAAATGAGGACATTTCGTCCATTGTGAACCTCTATGAACTTGCCTCTCGGAGTTTGGCTAATCTGGCAGTCACAAGGAAGGACAACAAGGATAGTGATGGCTATTACACTGAACACTTTGTTACACAGCATGACATGCTTAGGGAGTTGGCTATCCTGCAGATGAGTCAGGAACCACTGCAACATAGAATGAGGCTCATGATTGACATATGTGGAGACAACCTTCCTATGTGGTGGAAAGAACAAAATTATGAATCCCTCATTGCTCGCCTTGTATCTATCTCGACAGATGAAGAGTTCTCATCTAAATGGCAAAACTTGCAACTACCAGAGGCAGAGGTTTTGATTTTGAACTTTCAGACCAAGTATTATGCCTTACCAGAGTTTGTGGAGAAAATGAATAAATTGAAGACTCTAGTACTCACAAGTTATGGTATCACTCCGGCTGAGTTGAATAACTTTCAACTAGTTGATTCAAAACCGAATCTGAAGAGAATCAGATTAGAACGAATTTCAATTCCTTCCATAAGCAGGTATCCTATACAGTTGAAAAGTTTGCAAAAGATTTCTCTATTCATGTGTAGAATTGGCCAAGGTTTTGGTAATGGTTCCATCCATATATCAGAGGCGTTTCCAAATCTTGTTGAAATGAATATTGATTACTGCAATGATTTGGTGGAGTTGCCTCCTCAATTGTGTGACCTTGTTCAATTGAAGAAACTCAGTGTCACCAATTCTCATAAACTCTCTGCCTTACCTGAAGACATTGGAAATCTAGTAAATTTAGAGCTGTTGAGGCTCAGGTGTTGTACAGACTTGTCAGAGTTACCTGGCTCGGTCAGGAACCTCAAGAAGTTAAACTTGCTTGACATATCTGATTGCTTTAGCATTAAGGAATTGCCTGAAGACATTGGAGAATTGTGCAATTTAGAAAGGCTCAACATGAGACAGTGCTCGAGATTGAATGAGTTGCCTTCTTCAGTTTTGGATCTTGAACAGTTGAAGGAAGTGACATGTGATGAAGAGACTGAAATTTTATGGGAACCCTTTTTACCCTTTCTCAAGAACATACACATGAAGGTTGTGAAAGAAGATATCAACCTGAATTGGCTCCACAAGGCACATTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
NB-ARC RPW8

Protein Analysis

787

Amino Acids

90.03

Weight (kDa)

5.59

Isoelectric Point (pI)

44.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RPW8 PF05659 1 - 103 5.6e-17 Arabidopsis broad-spectrum mildew resistance protein RPW8
NB-ARC PF00931 142 - 298 9.3e-16 NB-ARC domain
AAA_22 PF13401 155 - 257 2.1e-06 AAA domain
LRR_14 PF23598 622 - 704 4.8e-09 Leucine-rich repeat region
LRR_14 PF23598 707 - 755 6.6e-07 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 814
Acc36I ACCTGC 2 cut(s) 165, 1755
AccB1I GGYRCC 1 cut(s) 632
AccB7I CCANNNNNTGG 1 cut(s) 833
AccII CGCG 1 cut(s) 867
AciI CCGC 3 cut(s) 495, 865, 1008
AclI AACGTT 2 cut(s) 300, 958
AclWI GGATC 2 cut(s) 754, 2229
AcoI YGGCCR 1 cut(s) 1822
AcsI RAATTY 6 cut(s) 548, 686, 752, 1743, 2014, 2265
AcuI CTGAAG 9 cut(s) 212, 651, 713, 951, 1197, 1742, 2013, 2157, 2196
AfaI GTAC 4 cut(s) 194, 599, 1653, 2044
AfiI CCNNNNNNNGG 5 cut(s) 17, 18, 19, 833, 1764
AflII CTTAAG 1 cut(s) 1070
AflIII ACRYGT 1 cut(s) 2246
AhdI GACNNNNNGTC 2 cut(s) 460, 1249
AhlI ACTAGT 1 cut(s) 1699
AjnI CCWGG 4 cut(s) 484, 636, 726, 2062
AjuI GAANNNNNNNTTGG 6 cut(s) 266, 298, 491, 523, 820, 852
AluBI AGCT 9 cut(s) 109, 148, 445, 616, 675, 918, 1110, 1196, 2023
AluI AGCT 9 cut(s) 109, 148, 445, 616, 675, 918, 1110, 1196, 2023
Alw21I GWGCWC 3 cut(s) 164, 920, 2189
Alw26I GTCTC 4 cut(s) 1140, 1443, 2173, 2252
AlwI GGATC 2 cut(s) 754, 2229
AlwNI CAGNNNCTG 3 cut(s) 55, 235, 1199
Ama87I CYCGRG 2 cut(s) 17, 2188
AoxI GGCC 1 cut(s) 1822
ApeKI GCWGC 6 cut(s) 49, 198, 313, 679, 896, 1012
ApoI RAATTY 6 cut(s) 548, 686, 752, 1743, 2014, 2265
ArsI GACNNNNNNTTYG 2 cut(s) 546, 578
Asp700I GAANNNNTTC 2 cut(s) 756, 936
AspS9I GGNCC 3 cut(s) 95, 640, 724
AsuHPI GGTGA 6 cut(s) 304, 481, 817, 881, 920, 1954
AvaI CYCGRG 2 cut(s) 17, 2188
AvaII GGWCC 3 cut(s) 95, 640, 724
AxyI CCTNAGG 1 cut(s) 904
BaeGI GKGCMC 1 cut(s) 637
BalI TGGCCA 1 cut(s) 1824
BanI GGYRCC 1 cut(s) 632
BanII GRGCYC 1 cut(s) 920
BbsI GAAGAC 4 cut(s) 556, 1649, 2001, 2145
Bbv12I GWGCWC 3 cut(s) 164, 920, 2189
BbvI GCAGC 6 cut(s) 61, 210, 300, 666, 908, 1024
BccI CCATC 5 cut(s) 61, 86, 460, 1325, 1853
BceAI ACGGC 1 cut(s) 211
BcgI CGANNNNNNTGC 2 cut(s) 270, 304
BciT130I CCWGG 4 cut(s) 486, 638, 728, 2064
BciVI GTATCC 1 cut(s) 1779
BclI TGATCA 1 cut(s) 57
BcoDI GTCTC 4 cut(s) 1140, 1443, 2173, 2252
BcuI ACTAGT 1 cut(s) 1699
BfaI CTAG 5 cut(s) 110, 1053, 1649, 1700, 2009
BfmI CTRYAG 2 cut(s) 680, 1391
BfrI CTTAAG 1 cut(s) 1070
BfuAI ACCTGC 2 cut(s) 165, 1755
BfuI GTATCC 1 cut(s) 1779
BglII AGATCT 1 cut(s) 934
BisI GCNGC 6 cut(s) 50, 199, 314, 680, 897, 1013
BlsI GCNGC 6 cut(s) 51, 200, 315, 681, 898, 1014
BmcAI AGTACT 1 cut(s) 1653
Bme1390I CCNGG 4 cut(s) 486, 638, 728, 2064
Bme18I GGWCC 3 cut(s) 95, 640, 724
BmeRI GACNNNNNGTC 2 cut(s) 460, 1249
BmeT110I CYCGRG 2 cut(s) 17, 2188
BmgT120I GGNCC 3 cut(s) 95, 640, 724
BmiI GGNNCC 7 cut(s) 634, 642, 1407, 1843, 2078, 2277, 2345
BmrFI CCNGG 4 cut(s) 486, 638, 728, 2064
BmsI GCATC 5 cut(s) 482, 520, 862, 908, 1105
BpiI GAAGAC 4 cut(s) 556, 1649, 2001, 2145
BpmI CTGGAG 1 cut(s) 468
Bpu10I CCTNAGC 3 cut(s) 387, 1373, 2033
BpuEI CTTGAG 3 cut(s) 782, 2066, 2279
BsaJI CCNNGG 3 cut(s) 636, 1162, 1825
Bsc4I CCNNNNNNNGG 5 cut(s) 17, 18, 19, 833, 1764
Bse1I ACTGG 1 cut(s) 93
Bse21I CCTNAGG 1 cut(s) 904
Bse3DI GCAATG 5 cut(s) 565, 882, 1494, 1906, 2356
BseBI CCWGG 4 cut(s) 486, 638, 728, 2064
BseDI CCNNGG 3 cut(s) 636, 1162, 1825
BseGI GGATG 7 cut(s) 97, 274, 497, 736, 899, 1129, 1845
BseLI CCNNNNNNNGG 5 cut(s) 17, 18, 19, 833, 1764
BseMI GCAATG 5 cut(s) 565, 882, 1494, 1906, 2356
BseMII CTCAG 5 cut(s) 378, 1206, 1671, 1969, 2047
BseNI ACTGG 1 cut(s) 93
BseRI GAGGAG 4 cut(s) 116, 119, 153, 1911
BseSI GKGCMC 1 cut(s) 637
BseXI GCAGC 6 cut(s) 61, 210, 300, 666, 908, 1024
BsgI GTGCAG 2 cut(s) 275, 299
Bsh1236I CGCG 1 cut(s) 867
BshFI GGCC 1 cut(s) 1824
BshNI GGYRCC 1 cut(s) 632
BsiHKAI GWGCWC 3 cut(s) 164, 920, 2189
BsiHKCI CYCGRG 2 cut(s) 17, 2188
BsiSI CCGG 1 cut(s) 1676
BslFI GGGAC 1 cut(s) 626
BslI CCNNNNNNNGG 5 cut(s) 17, 18, 19, 833, 1764
BsmAI GTCTC 4 cut(s) 1140, 1443, 2173, 2252
BsmFI GGGAC 1 cut(s) 626
BsmI GAATGC 1 cut(s) 1154
BsnI GGCC 1 cut(s) 1824
BsoBI CYCGRG 2 cut(s) 17, 2188
Bsp1286I GDGCHC 4 cut(s) 164, 637, 920, 2189
Bsp1407I TGTACA 1 cut(s) 2042
Bsp143I GATC 5 cut(s) 57, 746, 934, 998, 2221
BspACI CCGC 3 cut(s) 495, 865, 1008
BspANI GGCC 1 cut(s) 1824
BspCNI CTCAG 5 cut(s) 379, 1205, 1672, 1968, 2046
BspFNI CGCG 1 cut(s) 867
BspHI TCATGA 1 cut(s) 1431
BspLI GGNNCC 7 cut(s) 634, 642, 1407, 1843, 2078, 2277, 2345
BspMAI CTGCAG 2 cut(s) 684, 1395
BspMI ACCTGC 2 cut(s) 165, 1755
BspPI GGATC 2 cut(s) 754, 2229
BspT107I GGYRCC 1 cut(s) 632
BspTI CTTAAG 1 cut(s) 1070
BsrDI GCAATG 5 cut(s) 565, 882, 1494, 1906, 2356
BsrGI TGTACA 1 cut(s) 2042
BsrI ACTGG 1 cut(s) 93
BssECI CCNNGG 3 cut(s) 636, 1162, 1825
BssMI GATC 5 cut(s) 57, 746, 934, 998, 2221
BssT1I CCWWGG 2 cut(s) 1162, 1825
Bst2UI CCWGG 4 cut(s) 486, 638, 728, 2064
Bst4CI ACNGT 7 cut(s) 406, 577, 988, 1201, 1779, 2184, 2232
Bst6I CTCTTC 4 cut(s) 1122, 1521, 1718, 2250
BstAFI CTTAAG 1 cut(s) 1070
BstAPI GCANNNNNTGC 2 cut(s) 1369, 1552
BstAUI TGTACA 1 cut(s) 2042
BstC8I GCNNGC 5 cut(s) 172, 203, 677, 1010, 1501
BstDEI CTNAG 9 cut(s) 119, 387, 904, 1111, 1192, 1373, 1680, 1955, 2033
BstF5I GGATG 7 cut(s) 97, 274, 497, 736, 899, 1129, 1845
BstFNI CGCG 1 cut(s) 867
BstKTI GATC 5 cut(s) 60, 749, 937, 1001, 2224
BstMAI GTCTC 4 cut(s) 1140, 1443, 2173, 2252
BstMBI GATC 5 cut(s) 57, 746, 934, 998, 2221
BstMWI GCNNNNNNNGC 4 cut(s) 1298, 1369, 1552, 2029
BstNI CCWGG 4 cut(s) 486, 638, 728, 2064
BstNSI RCATGY 2 cut(s) 1372, 2250
BstSCI CCNGG 4 cut(s) 484, 636, 726, 2062
BstSFI CTRYAG 2 cut(s) 680, 1391
BstSLI GKGCMC 1 cut(s) 637
BstUI CGCG 1 cut(s) 867
BstV1I GCAGC 6 cut(s) 61, 210, 300, 666, 908, 1024
BstV2I GAAGAC 4 cut(s) 556, 1649, 2001, 2145
BstX2I RGATCY 2 cut(s) 934, 2221
BstXI CCANNNNNNTGG 1 cut(s) 1832
BstYI RGATCY 2 cut(s) 934, 2221
Bsu36I CCTNAGG 1 cut(s) 904
BsuI GTATCC 1 cut(s) 1779
BsuRI GGCC 1 cut(s) 1824
BtsCI GGATG 7 cut(s) 97, 274, 497, 736, 899, 1129, 1845
BtsI GCAGTG 1 cut(s) 1409
BtsIMutI CAGTG 5 cut(s) 53, 1341, 1409, 1963, 2189
BveI ACCTGC 2 cut(s) 165, 1755
Cac8I GCNNGC 5 cut(s) 172, 203, 677, 1010, 1501
CaiI CAGNNNCTG 3 cut(s) 55, 235, 1199
CciI TCATGA 1 cut(s) 1431
Cfr13I GGNCC 3 cut(s) 95, 640, 724
Csp6I GTAC 4 cut(s) 193, 598, 1652, 2043
CviAII CATG 9 cut(s) 893, 1082, 1364, 1369, 1432, 1810, 2176, 2247, 2308
CviQI GTAC 4 cut(s) 193, 598, 1652, 2043
DdeI CTNAG 9 cut(s) 119, 387, 904, 1111, 1192, 1373, 1680, 1955, 2033
DpnI GATC 5 cut(s) 59, 748, 936, 1000, 2223
DpnII GATC 5 cut(s) 57, 746, 934, 998, 2221
DrdI GACNNNNNNGTC 1 cut(s) 814
DriI GACNNNNNGTC 2 cut(s) 460, 1249
DseDI GACNNNNNNGTC 1 cut(s) 814
EaeI YGGCCR 1 cut(s) 1822
Eam1104I CTCTTC 4 cut(s) 1122, 1521, 1718, 2250
Eam1105I GACNNNNNGTC 2 cut(s) 460, 1249
EarI CTCTTC 4 cut(s) 1122, 1521, 1718, 2250
Ecl136II GAGCTC 1 cut(s) 918
Eco130I CCWWGG 2 cut(s) 1162, 1825
Eco24I GRGCYC 1 cut(s) 920
Eco32I GATATC 3 cut(s) 25, 971, 2329
Eco47I GGWCC 3 cut(s) 95, 640, 724
Eco53kI GAGCTC 1 cut(s) 918
Eco57I CTGAAG 9 cut(s) 212, 651, 713, 951, 1197, 1742, 2013, 2157, 2196
Eco81I CCTNAGG 1 cut(s) 904
Eco88I CYCGRG 2 cut(s) 17, 2188
EcoICRI GAGCTC 1 cut(s) 918
EcoO109I RGGNCCY 1 cut(s) 640
EcoRI GAATTC 1 cut(s) 752
EcoRII CCWGG 4 cut(s) 484, 636, 726, 2062
EcoRV GATATC 3 cut(s) 25, 971, 2329
EcoT14I CCWWGG 2 cut(s) 1162, 1825
EcoT38I GRGCYC 1 cut(s) 920
ErhI CCWWGG 2 cut(s) 1162, 1825
FaeI CATG 9 cut(s) 896, 1085, 1367, 1372, 1435, 1813, 2179, 2250, 2311
FalI AAGNNNNNCTT 6 cut(s) 578, 610, 805, 837, 2078, 2110
FaqI GGGAC 1 cut(s) 626
FatI CATG 9 cut(s) 892, 1081, 1363, 1368, 1431, 1809, 2175, 2246, 2307
FauI CCCGC 2 cut(s) 488, 1001
FauNDI CATATG 1 cut(s) 1442
FbaI TGATCA 1 cut(s) 57
Fnu4HI GCNGC 6 cut(s) 50, 199, 314, 680, 897, 1013
FokI GGATG 7 cut(s) 104, 281, 504, 743, 886, 1136, 1832
FriOI GRGCYC 1 cut(s) 920
Fsp4HI GCNGC 6 cut(s) 50, 199, 314, 680, 897, 1013
FspBI CTAG 5 cut(s) 110, 1053, 1649, 1700, 2009
GluI GCNGC 6 cut(s) 50, 199, 314, 680, 897, 1013
GsuI CTGGAG 1 cut(s) 468
HaeIII GGCC 1 cut(s) 1824
HapII CCGG 1 cut(s) 1676
Hin1II CATG 9 cut(s) 896, 1085, 1367, 1372, 1435, 1813, 2179, 2250, 2311
HindIII AAGCTT 1 cut(s) 1108
HinfI GANTC 9 cut(s) 41, 115, 1188, 1399, 1487, 1645, 1706, 1717, 1728
HpaII CCGG 1 cut(s) 1676
HphI GGTGA 6 cut(s) 304, 481, 817, 881, 920, 1954
Hpy166II GTNNAC 2 cut(s) 33, 1261
Hpy8I GTNNAC 2 cut(s) 33, 1261
HpyCH4III ACNGT 7 cut(s) 406, 577, 988, 1201, 1779, 2184, 2232
HpyCH4IV ACGT 2 cut(s) 300, 958
HpyF10VI GCNNNNNNNGC 4 cut(s) 1298, 1369, 1552, 2029
HpyF3I CTNAG 9 cut(s) 119, 387, 904, 1111, 1192, 1373, 1680, 1955, 2033
HpySE526I ACGT 2 cut(s) 300, 958
Hsp92II CATG 9 cut(s) 896, 1085, 1367, 1372, 1435, 1813, 2179, 2250, 2311
Ksp22I TGATCA 1 cut(s) 57
Kzo9I GATC 5 cut(s) 57, 746, 934, 998, 2221
LmnI GCTCC 5 cut(s) 106, 145, 487, 915, 2349
Lsp1109I GCAGC 6 cut(s) 61, 210, 300, 666, 908, 1024
LweI GCATC 5 cut(s) 482, 520, 862, 908, 1105
MaeI CTAG 5 cut(s) 110, 1053, 1649, 1700, 2009
MaeII ACGT 2 cut(s) 300, 958
MalI GATC 5 cut(s) 59, 748, 936, 1000, 2223
MboI GATC 5 cut(s) 57, 746, 934, 998, 2221
MfeI CAATTG 2 cut(s) 1925, 1943
MflI RGATCY 2 cut(s) 934, 2221
MhlI GDGCHC 4 cut(s) 164, 637, 920, 2189
MlsI TGGCCA 1 cut(s) 1824
MluNI TGGCCA 1 cut(s) 1824
MlyI GAGTC 3 cut(s) 35, 1408, 1639
MmeI TCCRAC 4 cut(s) 388, 419, 973, 1023
Mox20I TGGCCA 1 cut(s) 1824
MroXI GAANNNNTTC 2 cut(s) 756, 936
MscI TGGCCA 1 cut(s) 1824
MseI TTAA 5 cut(s) 450, 779, 1071, 2090, 2124
MslI CAYNNNNRTG 3 cut(s) 1211, 1540, 2306
Msp20I TGGCCA 1 cut(s) 1824
MspCI CTTAAG 1 cut(s) 1070
MspI CCGG 1 cut(s) 1676
MspR9I CCNGG 4 cut(s) 486, 638, 728, 2064
MunI CAATTG 2 cut(s) 1925, 1943
Mva1269I GAATGC 1 cut(s) 1154
MvaI CCWGG 4 cut(s) 486, 638, 728, 2064
MvnI CGCG 1 cut(s) 867
MwoI GCNNNNNNNGC 4 cut(s) 1298, 1369, 1552, 2029
NdeI CATATG 1 cut(s) 1442
NdeII GATC 5 cut(s) 57, 746, 934, 998, 2221
NlaIII CATG 9 cut(s) 896, 1085, 1367, 1372, 1435, 1813, 2179, 2250, 2311
NlaIV GGNNCC 7 cut(s) 634, 642, 1407, 1843, 2078, 2277, 2345
NmuCI GTSAC 6 cut(s) 222, 805, 1303, 1931, 1960, 2242
NspI RCATGY 2 cut(s) 1372, 2250
PaeR7I CTCGAG 1 cut(s) 2188
PagI TCATGA 1 cut(s) 1431
PciI ACATGT 1 cut(s) 2246
PctI GAATGC 1 cut(s) 1154
PdmI GAANNNNTTC 2 cut(s) 756, 936
PfeI GAWTC 6 cut(s) 115, 1188, 1487, 1706, 1717, 1728
PflMI CCANNNNNTGG 1 cut(s) 833
PfoI TCCNGGA 2 cut(s) 484, 726
PkrI GCNGC 6 cut(s) 51, 200, 315, 681, 898, 1014
PleI GAGTC 3 cut(s) 35, 1407, 1639
PpsI GAGTC 3 cut(s) 35, 1407, 1639
PpuMI RGGWCCY 1 cut(s) 640
PscI ACATGT 1 cut(s) 2246
Psp124BI GAGCTC 1 cut(s) 920
Psp1406I AACGTT 2 cut(s) 300, 958
Psp5II RGGWCCY 1 cut(s) 640
Psp6I CCWGG 4 cut(s) 484, 636, 726, 2062
PspGI CCWGG 4 cut(s) 484, 636, 726, 2062
PspN4I GGNNCC 7 cut(s) 634, 642, 1407, 1843, 2078, 2277, 2345
PspPI GGNCC 3 cut(s) 95, 640, 724
PspPPI RGGWCCY 1 cut(s) 640
PsrI GAACNNNNNNTAC 2 cut(s) 2268, 2300
PstI CTGCAG 2 cut(s) 684, 1395
PstNI CAGNNNCTG 3 cut(s) 55, 235, 1199
PsuI RGATCY 2 cut(s) 934, 2221
RsaI GTAC 4 cut(s) 194, 599, 1653, 2044
RsaNI GTAC 4 cut(s) 193, 598, 1652, 2043
RseI CAYNNNNRTG 3 cut(s) 1211, 1540, 2306
SacI GAGCTC 1 cut(s) 920
SaqAI TTAA 5 cut(s) 450, 779, 1071, 2090, 2124
SatI GCNGC 6 cut(s) 50, 199, 314, 680, 897, 1013
Sau3AI GATC 5 cut(s) 57, 746, 934, 998, 2221
Sau96I GGNCC 3 cut(s) 95, 640, 724
ScaI AGTACT 1 cut(s) 1653
SchI GAGTC 3 cut(s) 35, 1408, 1639
ScrFI CCNGG 4 cut(s) 486, 638, 728, 2064
SduI GDGCHC 4 cut(s) 164, 637, 920, 2189
SfaNI GCATC 5 cut(s) 482, 520, 862, 908, 1105
SfcI CTRYAG 2 cut(s) 680, 1391
Sfr274I CTCGAG 1 cut(s) 2188
SinI GGWCC 3 cut(s) 95, 640, 724
SlaI CTCGAG 1 cut(s) 2188
SmiMI CAYNNNNRTG 3 cut(s) 1211, 1540, 2306
SmlI CTYRAG 5 cut(s) 761, 1070, 2081, 2188, 2294
SmoI CTYRAG 5 cut(s) 761, 1070, 2081, 2188, 2294
SpeI ACTAGT 1 cut(s) 1699
SsiI CCGC 3 cut(s) 495, 865, 1008
SspI AATATT 1 cut(s) 1888
SspMI CTAG 5 cut(s) 110, 1053, 1649, 1700, 2009
SstI GAGCTC 1 cut(s) 920
StyD4I CCNGG 4 cut(s) 484, 636, 726, 2062
StyI CCWWGG 2 cut(s) 1162, 1825
TaaI ACNGT 7 cut(s) 406, 577, 988, 1201, 1779, 2184, 2232
TaiI ACGT 2 cut(s) 303, 961
TaqI TCGA 6 cut(s) 164, 464, 625, 771, 1517, 2189
TaqII GACCGA 1 cut(s) 2059
TatI WGTACW 2 cut(s) 1651, 2042
TfiI GAWTC 6 cut(s) 115, 1188, 1487, 1706, 1717, 1728
Tru1I TTAA 5 cut(s) 450, 779, 1071, 2090, 2124
Tru9I TTAA 5 cut(s) 450, 779, 1071, 2090, 2124
TscAI CASTG 5 cut(s) 60, 1348, 1416, 1963, 2189
TseFI GTSAC 6 cut(s) 222, 805, 1303, 1931, 1960, 2242
TseI GCWGC 6 cut(s) 49, 198, 313, 679, 896, 1012
Tsp45I GTSAC 6 cut(s) 222, 805, 1303, 1931, 1960, 2242
TspGWI ACGGA 1 cut(s) 471
TspRI CASTG 5 cut(s) 60, 1348, 1416, 1963, 2189
Van91I CCANNNNNTGG 1 cut(s) 833
Vha464I CTTAAG 1 cut(s) 1070
VpaK11BI GGWCC 3 cut(s) 95, 640, 724
XapI RAATTY 6 cut(s) 548, 686, 752, 1743, 2014, 2265
XbaI TCTAGA 1 cut(s) 1052
XceI RCATGY 2 cut(s) 1372, 2250
XcmI CCANNNNNNNNNTGG 1 cut(s) 1023
XhoI CTCGAG 1 cut(s) 2188
XmnI GAANNNNTTC 2 cut(s) 756, 936
XspI CTAG 5 cut(s) 110, 1053, 1649, 1700, 2009
ZrmI AGTACT 1 cut(s) 1653
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.