Rmu_co8483217.1_g000001

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8483217.1
OG0000039
Physical Location & Seq
Reverse (-)
2 .. 1977
1976 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8483217.1_g000001.1.cds

Sequence Viewer

Length: 1220 bp
atgatcaatccactggataaacttttcagtgatctctgcgatggctttaaagacctcgtcaagaagaatattcaatctaaagccaaagtcgacggcatcgaagccaagctaaaagctctagagccggggatccgagacatggtgaagagtaatgaggtactagattgcccaaggaacgaactaaaagatttaacagaagttatggagactggcatcaagctcactgtcaagtgctcaaagtctcggtggtgggagcccttctggaagtacaaatacgccatcaaacttactgaatgggagaaactggttgtgaaaaatgtggagactttggtagggaatatagaggagaaattggaaattgtgatacaaaatccacctggggaacctaaggccaggatgagtactgaagaacctgaagttccaggttttacagtgggattggacaagcatttgaaggaattgaagatgaagcttctcaaggatggggtgtcaatgcttgtaataacagctcctggagggtctggcaaaaccactttggctaaaatgttttatcatgatcatgaagtcaaagataaattccccaagaacatatttgtttctgtttcaacaaagtccaactgtattgttgtacaagaactatgtcaaaaattgggatcccaggaatctgcattctcaaatgaagacattgcattcagctggctgaagaaatttctgatggaaacagcacaaaagcctttgcttctcatcctggatgatgtttggtatgaatcgaaatcccttcttgagaagtgtaatgaaccaagtatacaagcaaatctcagtatcttggtgacatcaagatcttcatttccaagtgtcggttgtcaatatcctttagatgcattgaatcacaaagatgcaatgactcttttttgccattcagtccagggagataagagctacaaggttccagaaagacttcatgaccagatagtaaggcgctgtaagggttgtccacttgccattaaagtggtcggaaaatctctttgtggagaaattacagagtcatggcttaaaaaattaaccgagtggtctgaaggtgcttctatttttgataccgagactgaagtacttctttgcctcaaaagtagcttagacgctttggatgaaaaagatcaaactatcaaggaatgcttcttggacctgggtgcatttcctgaagatcaaagaatcccagctgt
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
NB-ARC RPW8

Protein Analysis

407

Amino Acids

45.92

Weight (kDa)

6.01

Isoelectric Point (pI)

39.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 90, 805
AclWI GGATC 4 cut(s) 124, 137, 648, 661
AcsI RAATTY 2 cut(s) 575, 707
AcuI CTGAAG 6 cut(s) 426, 435, 722, 1095, 1125, 1218
AfaI GTAC 5 cut(s) 159, 269, 403, 630, 1110
AfiI CCNNNNNNNGG 2 cut(s) 139, 857
AgsI TTSAA 5 cut(s) 74, 454, 463, 606, 886
AjnI CCWGG 8 cut(s) 376, 392, 421, 511, 657, 747, 924, 1182
AluBI AGCT 9 cut(s) 109, 116, 220, 472, 509, 696, 939, 1131, 1217
AluI AGCT 9 cut(s) 109, 116, 220, 472, 509, 696, 939, 1131, 1217
Alw21I GWGCWC 1 cut(s) 236
Alw26I GTCTC 5 cut(s) 129, 200, 246, 317, 1094
AlwI GGATC 4 cut(s) 124, 137, 648, 661
AlwNI CAGNNNCTG 1 cut(s) 512
AoxI GGCC 1 cut(s) 390
ApoI RAATTY 2 cut(s) 575, 707
Asp700I GAANNNNTTC 2 cut(s) 957, 1110
AspLEI GCGC 1 cut(s) 981
AspS9I GGNCC 1 cut(s) 1180
AsuC2I CCSGG 1 cut(s) 126
AsuHPI GGTGA 2 cut(s) 154, 841
AvaII GGWCC 1 cut(s) 1180
AxyI CCTNAGG 1 cut(s) 387
BamHI GGATCC 2 cut(s) 129, 653
BanII GRGCYC 1 cut(s) 258
BarI GAAGNNNNNNTAC 2 cut(s) 257, 289
BbsI GAAGAC 1 cut(s) 687
Bbv12I GWGCWC 1 cut(s) 236
BccI CCATC 4 cut(s) 35, 287, 476, 709
BceAI ACGGC 1 cut(s) 109
BciT130I CCWGG 8 cut(s) 378, 394, 423, 513, 659, 749, 926, 1184
BclI TGATCA 2 cut(s) 3, 556
BcnI CCSGG 1 cut(s) 126
BcoDI GTCTC 5 cut(s) 129, 200, 246, 317, 1094
BfaI CTAG 2 cut(s) 119, 161
BfoI RGCGCY 1 cut(s) 982
BglII AGATCT 1 cut(s) 839
BmcAI AGTACT 2 cut(s) 403, 1110
Bme1390I CCNGG 9 cut(s) 126, 378, 394, 423, 513, 659, 749, 926, 1184
Bme18I GGWCC 1 cut(s) 1180
BmgT120I GGNCC 1 cut(s) 1180
BmiI GGNNCC 5 cut(s) 131, 255, 384, 655, 948
BmrFI CCNGG 9 cut(s) 126, 378, 394, 423, 513, 659, 749, 926, 1184
BmsI GCATC 4 cut(s) 105, 222, 868, 886
BpiI GAAGAC 1 cut(s) 687
BpmI CTGGAG 1 cut(s) 534
BpuEI CTTGAG 2 cut(s) 461, 803
BpuMI CCSGG 1 cut(s) 126
BsaJI CCNNGG 6 cut(s) 125, 170, 377, 657, 925, 1183
Bsc4I CCNNNNNNNGG 2 cut(s) 139, 857
Bse1I ACTGG 3 cut(s) 18, 214, 309
Bse21I CCTNAGG 1 cut(s) 387
Bse3DI GCAATG 2 cut(s) 684, 906
BseBI CCWGG 8 cut(s) 378, 394, 423, 513, 659, 749, 926, 1184
BseDI CCNNGG 6 cut(s) 125, 170, 377, 657, 925, 1183
BseGI GGATG 5 cut(s) 402, 487, 744, 757, 1150
BseLI CCNNNNNNNGG 2 cut(s) 139, 857
BseMI GCAATG 2 cut(s) 684, 906
BseMII CTCAG 1 cut(s) 832
BseNI ACTGG 3 cut(s) 18, 214, 309
BseRI GAGGAG 1 cut(s) 359
BseYI CCCAGC 1 cut(s) 1213
BshFI GGCC 1 cut(s) 392
BsiHKAI GWGCWC 1 cut(s) 236
BsiSI CCGG 1 cut(s) 125
BslI CCNNNNNNNGG 2 cut(s) 139, 857
BsmAI GTCTC 5 cut(s) 129, 200, 246, 317, 1094
BsmI GAATGC 3 cut(s) 668, 689, 1175
BsnI GGCC 1 cut(s) 392
Bsp1286I GDGCHC 2 cut(s) 236, 258
Bsp1407I TGTACA 1 cut(s) 628
Bsp143I GATC 8 cut(s) 3, 31, 129, 556, 653, 839, 1153, 1201
BspANI GGCC 1 cut(s) 392
BspCNI CTCAG 1 cut(s) 831
BspHI TCATGA 3 cut(s) 553, 559, 961
BspLI GGNNCC 5 cut(s) 131, 255, 384, 655, 948
BspPI GGATC 4 cut(s) 124, 137, 648, 661
BsrDI GCAATG 2 cut(s) 684, 906
BsrGI TGTACA 1 cut(s) 628
BsrI ACTGG 3 cut(s) 18, 214, 309
BssECI CCNNGG 6 cut(s) 125, 170, 377, 657, 925, 1183
BssMI GATC 8 cut(s) 3, 31, 129, 556, 653, 839, 1153, 1201
BssNAI GTATAC 1 cut(s) 806
BssT1I CCWWGG 1 cut(s) 170
Bst1107I GTATAC 1 cut(s) 806
Bst2UI CCWGG 8 cut(s) 378, 394, 423, 513, 659, 749, 926, 1184
Bst4CI ACNGT 3 cut(s) 226, 433, 620
Bst6I CTCTTC 1 cut(s) 140
BstAUI TGTACA 1 cut(s) 628
BstC8I GCNNGC 1 cut(s) 698
BstDEI CTNAG 3 cut(s) 387, 818, 1132
BstF5I GGATG 5 cut(s) 402, 487, 744, 757, 1150
BstH2I RGCGCY 1 cut(s) 982
BstHHI GCGC 1 cut(s) 981
BstKTI GATC 8 cut(s) 6, 34, 132, 559, 656, 842, 1156, 1204
BstMAI GTCTC 5 cut(s) 129, 200, 246, 317, 1094
BstMBI GATC 8 cut(s) 3, 31, 129, 556, 653, 839, 1153, 1201
BstNI CCWGG 8 cut(s) 378, 394, 423, 513, 659, 749, 926, 1184
BstSCI CCNGG 9 cut(s) 124, 376, 392, 421, 511, 657, 747, 924, 1182
BstV2I GAAGAC 1 cut(s) 687
BstX2I RGATCY 3 cut(s) 129, 653, 839
BstXI CCANNNNNNTGG 1 cut(s) 1009
BstYI RGATCY 3 cut(s) 129, 653, 839
BstZ17I GTATAC 1 cut(s) 806
Bsu36I CCTNAGG 1 cut(s) 387
BsuRI GGCC 1 cut(s) 392
BtgZI GCGATG 1 cut(s) 54
BtsCI GGATG 5 cut(s) 402, 487, 744, 757, 1150
BtsIMutI CAGTG 4 cut(s) 11, 34, 222, 438
Cac8I GCNNGC 1 cut(s) 698
CaiI CAGNNNCTG 1 cut(s) 512
CciI TCATGA 3 cut(s) 553, 559, 961
CfoI GCGC 1 cut(s) 981
Cfr13I GGNCC 1 cut(s) 1180
CseI GACGC 1 cut(s) 1145
Csp6I GTAC 5 cut(s) 158, 268, 402, 629, 1109
CviAII CATG 5 cut(s) 139, 554, 560, 962, 1047
CviQI GTAC 5 cut(s) 158, 268, 402, 629, 1109
DdeI CTNAG 3 cut(s) 387, 818, 1132
DpnI GATC 8 cut(s) 5, 33, 131, 558, 655, 841, 1155, 1203
DpnII GATC 8 cut(s) 3, 31, 129, 556, 653, 839, 1153, 1201
DraI TTTAAA 1 cut(s) 49
Eam1104I CTCTTC 1 cut(s) 140
EarI CTCTTC 1 cut(s) 140
Eco130I CCWWGG 1 cut(s) 170
Eco24I GRGCYC 1 cut(s) 258
Eco47I GGWCC 1 cut(s) 1180
Eco57I CTGAAG 6 cut(s) 426, 435, 722, 1095, 1125, 1218
Eco81I CCTNAGG 1 cut(s) 387
EcoRII CCWGG 8 cut(s) 376, 392, 421, 511, 657, 747, 924, 1182
EcoT14I CCWWGG 1 cut(s) 170
EcoT22I ATGCAT 1 cut(s) 883
EcoT38I GRGCYC 1 cut(s) 258
ErhI CCWWGG 1 cut(s) 170
FaeI CATG 5 cut(s) 142, 557, 563, 965, 1050
FalI AAGNNNNNCTT 4 cut(s) 1098, 1130, 1157, 1189
FatI CATG 5 cut(s) 138, 553, 559, 961, 1046
FbaI TGATCA 2 cut(s) 3, 556
FblI GTMKAC 2 cut(s) 90, 805
FokI GGATG 5 cut(s) 409, 494, 731, 764, 1157
FriOI GRGCYC 1 cut(s) 258
FspBI CTAG 2 cut(s) 119, 161
GlaI GCGC 1 cut(s) 980
GsaI CCCAGC 1 cut(s) 1217
GsuI CTGGAG 1 cut(s) 534
HaeII RGCGCY 1 cut(s) 982
HaeIII GGCC 1 cut(s) 392
HapII CCGG 1 cut(s) 125
HgaI GACGC 1 cut(s) 1145
HhaI GCGC 1 cut(s) 981
Hin1II CATG 5 cut(s) 142, 557, 563, 965, 1050
Hin6I GCGC 1 cut(s) 979
HinP1I GCGC 1 cut(s) 979
HincII GTYRAC 1 cut(s) 91
HindII GTYRAC 1 cut(s) 91
HindIII AAGCTT 1 cut(s) 470
HinfI GANTC 6 cut(s) 662, 767, 886, 904, 1043, 1209
HpaII CCGG 1 cut(s) 125
HphI GGTGA 2 cut(s) 154, 841
Hpy166II GTNNAC 3 cut(s) 91, 806, 995
Hpy188I TCNGA 4 cut(s) 134, 714, 1016, 1075
Hpy8I GTNNAC 3 cut(s) 91, 806, 995
Hpy99I CGWCG 1 cut(s) 95
HpyAV CCTTC 4 cut(s) 268, 448, 788, 1070
HpyCH4III ACNGT 3 cut(s) 226, 433, 620
HpyCH4V TGCA 5 cut(s) 668, 689, 881, 899, 1190
HpyF3I CTNAG 3 cut(s) 387, 818, 1132
Hsp92II CATG 5 cut(s) 142, 557, 563, 965, 1050
HspAI GCGC 1 cut(s) 979
Ksp22I TGATCA 2 cut(s) 3, 556
Kzo9I GATC 8 cut(s) 3, 31, 129, 556, 653, 839, 1153, 1201
LmnI GCTCC 2 cut(s) 253, 514
LweI GCATC 4 cut(s) 105, 222, 868, 886
MaeI CTAG 2 cut(s) 119, 161
MaeIII GTNAC 1 cut(s) 829
MalI GATC 8 cut(s) 5, 33, 131, 558, 655, 841, 1155, 1203
MboI GATC 8 cut(s) 3, 31, 129, 556, 653, 839, 1153, 1201
MboII GAAGA 8 cut(s) 76, 157, 419, 475, 692, 715, 834, 1211
MflI RGATCY 3 cut(s) 129, 653, 839
MhlI GDGCHC 2 cut(s) 236, 258
MluCI AATT 8 cut(s) 350, 357, 458, 575, 647, 707, 1035, 1058
MlyI GAGTC 2 cut(s) 898, 1052
MmeI TCCRAC 2 cut(s) 639, 994
MnlI CCTC 5 cut(s) 65, 148, 337, 509, 1130
Mph1103I ATGCAT 1 cut(s) 883
MroXI GAANNNNTTC 2 cut(s) 957, 1110
MseI TTAA 5 cut(s) 48, 191, 1005, 1053, 1061
MslI CAYNNNNRTG 3 cut(s) 558, 894, 1007
MspA1I CMGCKG 2 cut(s) 696, 1217
MspI CCGG 1 cut(s) 125
MspR9I CCNGG 9 cut(s) 126, 378, 394, 423, 513, 659, 749, 926, 1184
Mva1269I GAATGC 3 cut(s) 668, 689, 1175
MvaI CCWGG 8 cut(s) 378, 394, 423, 513, 659, 749, 926, 1184
NciI CCSGG 1 cut(s) 126
NdeII GATC 8 cut(s) 3, 31, 129, 556, 653, 839, 1153, 1201
NlaIII CATG 5 cut(s) 142, 557, 563, 965, 1050
NlaIV GGNNCC 5 cut(s) 131, 255, 384, 655, 948
NmuCI GTSAC 1 cut(s) 829
NsiI ATGCAT 1 cut(s) 883
PagI TCATGA 3 cut(s) 553, 559, 961
PcsI WCGNNNNNNNCGW 1 cut(s) 96
PctI GAATGC 3 cut(s) 668, 689, 1175
PdmI GAANNNNTTC 2 cut(s) 957, 1110
PfeI GAWTC 4 cut(s) 662, 767, 886, 1209
PflFI GACNNNGTC 1 cut(s) 56
PfoI TCCNGGA 2 cut(s) 511, 747
PleI GAGTC 2 cut(s) 898, 1051
PpsI GAGTC 2 cut(s) 898, 1051
Psp6I CCWGG 8 cut(s) 376, 392, 421, 511, 657, 747, 924, 1182
PspFI CCCAGC 1 cut(s) 1213
PspGI CCWGG 8 cut(s) 376, 392, 421, 511, 657, 747, 924, 1182
PspN4I GGNNCC 5 cut(s) 131, 255, 384, 655, 948
PspPI GGNCC 1 cut(s) 1180
PsrI GAACNNNNNNTAC 2 cut(s) 789, 821
PstNI CAGNNNCTG 1 cut(s) 512
PsuI RGATCY 3 cut(s) 129, 653, 839
PsyI GACNNNGTC 1 cut(s) 56
PvuII CAGCTG 2 cut(s) 696, 1217
RsaI GTAC 5 cut(s) 159, 269, 403, 630, 1110
RsaNI GTAC 5 cut(s) 158, 268, 402, 629, 1109
RseI CAYNNNNRTG 3 cut(s) 558, 894, 1007
SalI GTCGAC 1 cut(s) 89
SaqAI TTAA 5 cut(s) 48, 191, 1005, 1053, 1061
Sau3AI GATC 8 cut(s) 3, 31, 129, 556, 653, 839, 1153, 1201
Sau96I GGNCC 1 cut(s) 1180
ScaI AGTACT 2 cut(s) 403, 1110
SchI GAGTC 2 cut(s) 898, 1052
ScrFI CCNGG 9 cut(s) 126, 378, 394, 423, 513, 659, 749, 926, 1184
SduI GDGCHC 2 cut(s) 236, 258
SfaNI GCATC 4 cut(s) 105, 222, 868, 886
SinI GGWCC 1 cut(s) 1180
SmiMI CAYNNNNRTG 3 cut(s) 558, 894, 1007
SmlI CTYRAG 2 cut(s) 476, 782
SmoI CTYRAG 2 cut(s) 476, 782
Sse9I AATT 8 cut(s) 350, 357, 458, 575, 647, 707, 1035, 1058
SspI AATATT 1 cut(s) 70
SspMI CTAG 2 cut(s) 119, 161
StyD4I CCNGG 9 cut(s) 124, 376, 392, 421, 511, 657, 747, 924, 1182
StyI CCWWGG 1 cut(s) 170
TaaI ACNGT 3 cut(s) 226, 433, 620
TaqI TCGA 3 cut(s) 90, 99, 770
TasI AATT 8 cut(s) 350, 357, 458, 575, 647, 707, 1035, 1058
TatI WGTACW 4 cut(s) 267, 401, 628, 1108
TfiI GAWTC 4 cut(s) 662, 767, 886, 1209
Tru1I TTAA 5 cut(s) 48, 191, 1005, 1053, 1061
Tru9I TTAA 5 cut(s) 48, 191, 1005, 1053, 1061
TscAI CASTG 4 cut(s) 18, 34, 229, 438
TseFI GTSAC 1 cut(s) 829
Tsp45I GTSAC 1 cut(s) 829
TspDTI ATGAA 8 cut(s) 482, 576, 693, 780, 810, 834, 950, 1161
TspRI CASTG 4 cut(s) 18, 34, 229, 438
Tth111I GACNNNGTC 1 cut(s) 56
VpaK11BI GGWCC 1 cut(s) 1180
XapI RAATTY 2 cut(s) 575, 707
XbaI TCTAGA 1 cut(s) 118
XmiI GTMKAC 2 cut(s) 90, 805
XmnI GAANNNNTTC 2 cut(s) 957, 1110
XspI CTAG 2 cut(s) 119, 161
ZrmI AGTACT 2 cut(s) 403, 1110
Zsp2I ATGCAT 1 cut(s) 883
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.