MD02G1164400.v1.1

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
OG0000039
Physical Location & Seq
Forward (+)
14043427 .. 14047026
3600 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1164400.v1.1.491

Sequence Viewer

Length: 1509 bp
ATGTACAAAAGATACAAATACGCCAACAGGCTGATTGACTGGGATGGATCTCTTCAACGATTTCTGGAAATACTAAACGTTCAGGGAATAAGGGATGTGAAGGAAAGCACGGTTTCGGTGAGGAATATGGAGAAGCTGATCAGCAGAATTGAATCGAATATGGGGATACATTTGGCTGTTTCAAGGGAGACATTTGGTTCAGTTCCAGAACTTCCACGTGTTACAGTTGGATTGGATGAGCCTTTGAGGGATTTGAAGGAGATGCTTCTTAAGGACGATGTCTCAATGTTAGTGCTGACTGCTACCGGAGGATGGGGGAAAACCACATTGGCAACGAAATTCTGTCAAGATGAGGAAGTCAAAGATAAATTCAAGGAAAATATATTCTTTGTCACTGTTTCGGTACACCCCAACTCAGATGTAGAAAAGCTATATCAACGCATGAAGTCTCAGGAAGCAGGACAAGATCCTTTACTGCTGGTCCTGGATGATGTTTGGTCCAACTCTGTTCTTCAGAAGTTTGTTGAATTGAAATTGCGAAATTACAAGATCTTGGTGACATCGAGATCTGAATTTCCAGGATTTGGCACTCCATATAAACTCAAACCCTTGAATTATAAAGATTCAATGACTCTTTTGCGTCATTCAGCAGCCCTGGGAGATAGCTTGTCTGTTCCAGAAGATCTCCTGAGAGAGATACTAAAGCACTGTAAGGGAGTTCCGCTTGCCATTACAGTGACCGGGAACTCACTTAGTGGACAAGCAGCAGAATCCTGGCTTTCAAGACTAGAAGACTGGCGTAGAGATTCTATTCTTGATTATGAGACTAAGTTGCTTCTTTGCCTTAAAAGTAGCATAGATGCCTTAGGTGACAAAGAGGCTATCATCAGGGAATGTTTCATGGACCTTGTTTCATTTCCTGAAGATCAAAGAATCTCTGCTGCTGCTTTCATTGATATGTGGTCAGAGTTATATATGCTAGATGGGGACTTTCGGTCCATCAAGAACCTCCACGAGCTCGCCAGGAAAGGTCTGGCAAATCTTGTGATCACTAGGAATGAGAATATGGCGATTCTGGATAACTACTATAGCGAACACTTTGTTCGCCAGCATGATATGCTTAGAGATCTGGGTATCTACATTGCGAAACTAGACCCAATAGAAGATAGAAAAAGACTGATTGTCGTAAGTGGACGCAATCAACCCAAGTGGTTGAGGGAGCAGAAGTCTCAACCCATCAATGCTCGCCTATTATCTATCTCCTCTGATGGAACGTACCCAACACAATGGCAGAGTGTTCATCTACCACAAGTTGAGGTTCTAGTTTTGAATTTTAAGACAGAGAACAATGCCTTACCTGAATTTGTGCAGAAAATTGACAAACTGAAGGTTCTAATAGTCACAAACTATGGTTTATCACCTACTGAATTGAGTAATTTTAATCTTCTGGAATCATTATCAAATCTGAAGAGAATCAGATTAGAGAGCATTTCAATTCATCATCCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
NB-ARC RPW8

Protein Analysis

503

Amino Acids

57.57

Weight (kDa)

6.59

Isoelectric Point (pI)

39.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 80 - 147 6.4e-06 NB-ARC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 618
AccB7I CCANNNNNTGG 1 cut(s) 584
AciI CCGC 1 cut(s) 722
AclI AACGTT 1 cut(s) 78
AclWI GGATC 2 cut(s) 55, 461
AcsI RAATTY 5 cut(s) 338, 368, 572, 1330, 1361
AcuI CTGAAG 4 cut(s) 497, 942, 1406, 1487
AcvI CACGTG 1 cut(s) 218
AdeI CACNNNGTG 1 cut(s) 755
AfaI GTAC 3 cut(s) 5, 405, 1277
AfiI CCNNNNNNNGG 2 cut(s) 312, 584
AflII CTTAAG 1 cut(s) 269
AflIII ACRYGT 1 cut(s) 217
AhdI GACNNNNNGTC 2 cut(s) 994, 1181
AjnI CCWGG 5 cut(s) 483, 577, 654, 773, 1022
AjuI GAANNNNNNNTTGG 2 cut(s) 311, 343
AluBI AGCT 4 cut(s) 136, 430, 666, 1018
AluI AGCT 4 cut(s) 136, 430, 666, 1018
Alw21I GWGCWC 1 cut(s) 1020
Alw26I GTCTC 5 cut(s) 182, 286, 453, 818, 1233
AlwI GGATC 2 cut(s) 55, 461
ApeKI GCWGC 4 cut(s) 650, 764, 941, 944
ApoI RAATTY 5 cut(s) 338, 368, 572, 1330, 1361
AspS9I GGNCC 4 cut(s) 481, 498, 904, 996
AsuC2I CCSGG 1 cut(s) 742
AsuHPI GGTGA 4 cut(s) 130, 568, 881, 1410
AvaII GGWCC 4 cut(s) 481, 498, 904, 996
AxyI CCTNAGG 1 cut(s) 865
BanII GRGCYC 1 cut(s) 1020
BauI CACGAG 1 cut(s) 1013
BbrPI CACGTG 1 cut(s) 218
BbsI GAAGAC 1 cut(s) 798
Bbv12I GWGCWC 1 cut(s) 1020
BbvI GCAGC 4 cut(s) 662, 776, 928, 931
BccI CCATC 6 cut(s) 38, 306, 977, 1007, 1244, 1262
BciT130I CCWGG 5 cut(s) 485, 579, 656, 775, 1024
BciVI GTATCC 1 cut(s) 159
BclI TGATCA 2 cut(s) 138, 1047
BcnI CCSGG 1 cut(s) 742
BcoDI GTCTC 5 cut(s) 182, 286, 453, 818, 1233
BfaI CTAG 5 cut(s) 788, 980, 1053, 1151, 1322
BfmI CTRYAG 1 cut(s) 1087
BfrI CTTAAG 1 cut(s) 269
BfuI GTATCC 1 cut(s) 159
BglII AGATCT 4 cut(s) 549, 566, 682, 1126
BisI GCNGC 4 cut(s) 651, 765, 942, 945
BlsI GCNGC 4 cut(s) 652, 766, 943, 946
Bme1390I CCNGG 6 cut(s) 485, 579, 656, 742, 775, 1024
Bme18I GGWCC 4 cut(s) 481, 498, 904, 996
BmeRI GACNNNNNGTC 2 cut(s) 994, 1181
BmgT120I GGNCC 4 cut(s) 481, 498, 904, 996
BmrFI CCNGG 6 cut(s) 485, 579, 656, 742, 775, 1024
BmrI ACTGGG 1 cut(s) 49
BmsI GCATC 2 cut(s) 252, 850
BmuI ACTGGG 1 cut(s) 49
BpiI GAAGAC 1 cut(s) 798
BpuMI CCSGG 1 cut(s) 742
BsaAI YACGTR 1 cut(s) 218
BsaJI CCNNGG 2 cut(s) 654, 655
BsaWI WCCGGW 1 cut(s) 305
BsaXI ACNNNNNCTCC 2 cut(s) 1211, 1241
Bsc4I CCNNNNNNNGG 2 cut(s) 312, 584
Bse1I ACTGG 2 cut(s) 44, 800
Bse21I CCTNAGG 1 cut(s) 865
Bse3DI GCAATG 1 cut(s) 1140
BseBI CCWGG 5 cut(s) 485, 579, 656, 775, 1024
BseDI CCNNGG 2 cut(s) 654, 655
BseGI GGATG 6 cut(s) 49, 100, 241, 317, 493, 1501
BseLI CCNNNNNNNGG 2 cut(s) 312, 584
BseMI GCAATG 1 cut(s) 1140
BseMII CTCAG 3 cut(s) 429, 464, 680
BseNI ACTGG 2 cut(s) 44, 800
BseRI GAGGAG 1 cut(s) 1252
BseXI GCAGC 4 cut(s) 662, 776, 928, 931
BsgI GTGCAG 1 cut(s) 1388
BsiHKAI GWGCWC 1 cut(s) 1020
BsiSI CCGG 2 cut(s) 306, 741
BslFI GGGAC 1 cut(s) 1001
BslI CCNNNNNNNGG 2 cut(s) 312, 584
BsmAI GTCTC 5 cut(s) 182, 286, 453, 818, 1233
BsmFI GGGAC 1 cut(s) 1001
Bsp1286I GDGCHC 1 cut(s) 1020
Bsp1407I TGTACA 1 cut(s) 3
Bsp143I GATC 9 cut(s) 47, 138, 466, 549, 566, 682, 925, 1047, 1126
BspACI CCGC 1 cut(s) 722
BspCNI CTCAG 3 cut(s) 428, 463, 681
BspPI GGATC 2 cut(s) 55, 461
BspTI CTTAAG 1 cut(s) 269
BsrDI GCAATG 1 cut(s) 1140
BsrGI TGTACA 1 cut(s) 3
BsrI ACTGG 2 cut(s) 44, 800
BssECI CCNNGG 2 cut(s) 654, 655
BssMI GATC 9 cut(s) 47, 138, 466, 549, 566, 682, 925, 1047, 1126
BssSI CACGAG 1 cut(s) 1013
Bst2BI CACGAG 1 cut(s) 1013
Bst2UI CCWGG 5 cut(s) 485, 579, 656, 775, 1024
Bst4CI ACNGT 5 cut(s) 112, 226, 397, 710, 736
Bst6I CTCTTC 2 cut(s) 57, 1463
BstAFI CTTAAG 1 cut(s) 269
BstAPI GCANNNNNTGC 1 cut(s) 1117
BstAUI TGTACA 1 cut(s) 3
BstBAI YACGTR 1 cut(s) 218
BstC8I GCNNGC 4 cut(s) 726, 1020, 1109, 1246
BstDEI CTNAG 7 cut(s) 415, 450, 689, 752, 828, 865, 1121
BstF5I GGATG 6 cut(s) 49, 100, 241, 317, 493, 1501
BstKTI GATC 9 cut(s) 50, 141, 469, 552, 569, 685, 928, 1050, 1129
BstMAI GTCTC 5 cut(s) 182, 286, 453, 818, 1233
BstMBI GATC 9 cut(s) 47, 138, 466, 549, 566, 682, 925, 1047, 1126
BstMWI GCNNNNNNNGC 1 cut(s) 1117
BstNI CCWGG 5 cut(s) 485, 579, 656, 775, 1024
BstSCI CCNGG 6 cut(s) 483, 577, 654, 740, 773, 1022
BstSFI CTRYAG 1 cut(s) 1087
BstV1I GCAGC 4 cut(s) 662, 776, 928, 931
BstV2I GAAGAC 1 cut(s) 798
BstX2I RGATCY 6 cut(s) 47, 466, 549, 566, 682, 1126
BstXI CCANNNNNNTGG 1 cut(s) 1287
BstYI RGATCY 6 cut(s) 47, 466, 549, 566, 682, 1126
Bsu36I CCTNAGG 1 cut(s) 865
BsuI GTATCC 1 cut(s) 159
BtsCI GGATG 6 cut(s) 49, 100, 241, 317, 493, 1501
BtsIMutI CAGTG 3 cut(s) 393, 706, 741
Cac8I GCNNGC 4 cut(s) 726, 1020, 1109, 1246
Cfr13I GGNCC 4 cut(s) 481, 498, 904, 996
CseI GACGC 2 cut(s) 629, 1203
Csp6I GTAC 3 cut(s) 4, 404, 1276
CspCI CAANNNNNGTGG 2 cut(s) 1190, 1225
CviAII CATG 3 cut(s) 442, 901, 1112
CviQI GTAC 3 cut(s) 4, 404, 1276
DdeI CTNAG 7 cut(s) 415, 450, 689, 752, 828, 865, 1121
DpnI GATC 9 cut(s) 49, 140, 468, 551, 568, 684, 927, 1049, 1128
DpnII GATC 9 cut(s) 47, 138, 466, 549, 566, 682, 925, 1047, 1126
DraIII CACNNNGTG 1 cut(s) 755
DriI GACNNNNNGTC 2 cut(s) 994, 1181
Eam1104I CTCTTC 2 cut(s) 57, 1463
Eam1105I GACNNNNNGTC 2 cut(s) 994, 1181
EarI CTCTTC 2 cut(s) 57, 1463
Ecl136II GAGCTC 1 cut(s) 1018
Eco24I GRGCYC 1 cut(s) 1020
Eco47I GGWCC 4 cut(s) 481, 498, 904, 996
Eco53kI GAGCTC 1 cut(s) 1018
Eco57I CTGAAG 4 cut(s) 497, 942, 1406, 1487
Eco72I CACGTG 1 cut(s) 218
Eco81I CCTNAGG 1 cut(s) 865
EcoICRI GAGCTC 1 cut(s) 1018
EcoRII CCWGG 5 cut(s) 483, 577, 654, 773, 1022
EcoT38I GRGCYC 1 cut(s) 1020
FaeI CATG 3 cut(s) 445, 904, 1115
FaqI GGGAC 1 cut(s) 1001
FatI CATG 3 cut(s) 441, 900, 1111
FbaI TGATCA 2 cut(s) 138, 1047
Fnu4HI GCNGC 4 cut(s) 651, 765, 942, 945
FokI GGATG 6 cut(s) 56, 107, 248, 324, 500, 1488
FriOI GRGCYC 1 cut(s) 1020
Fsp4HI GCNGC 4 cut(s) 651, 765, 942, 945
FspBI CTAG 5 cut(s) 788, 980, 1053, 1151, 1322
GluI GCNGC 4 cut(s) 651, 765, 942, 945
HapII CCGG 2 cut(s) 306, 741
HgaI GACGC 2 cut(s) 629, 1203
Hin1II CATG 3 cut(s) 445, 904, 1115
HinfI GANTC 9 cut(s) 152, 623, 631, 770, 806, 933, 1072, 1451, 1473
HpaII CCGG 2 cut(s) 306, 741
HphI GGTGA 4 cut(s) 130, 568, 881, 1410
Hpy166II GTNNAC 3 cut(s) 406, 758, 1193
Hpy188I TCNGA 7 cut(s) 418, 516, 571, 967, 1267, 1467, 1478
Hpy8I GTNNAC 3 cut(s) 406, 758, 1193
HpyAV CCTTC 3 cut(s) 94, 250, 1381
HpyCH4III ACNGT 5 cut(s) 112, 226, 397, 710, 736
HpyCH4IV ACGT 3 cut(s) 78, 217, 1274
HpyCH4V TGCA 1 cut(s) 1369
HpyF10VI GCNNNNNNNGC 1 cut(s) 1117
HpyF3I CTNAG 7 cut(s) 415, 450, 689, 752, 828, 865, 1121
HpySE526I ACGT 3 cut(s) 78, 217, 1274
Hsp92II CATG 3 cut(s) 445, 904, 1115
Ksp22I TGATCA 2 cut(s) 138, 1047
Kzo9I GATC 9 cut(s) 47, 138, 466, 549, 566, 682, 925, 1047, 1126
LmnI GCTCC 1 cut(s) 1219
Lsp1109I GCAGC 4 cut(s) 662, 776, 928, 931
LweI GCATC 2 cut(s) 252, 850
MaeI CTAG 5 cut(s) 788, 980, 1053, 1151, 1322
MaeII ACGT 3 cut(s) 78, 217, 1274
MaeIII GTNAC 6 cut(s) 220, 391, 556, 736, 869, 1399
MalI GATC 9 cut(s) 49, 140, 468, 551, 568, 684, 927, 1049, 1128
MboI GATC 9 cut(s) 47, 138, 466, 549, 566, 682, 925, 1047, 1126
MboII GAAGA 8 cut(s) 44, 503, 692, 803, 935, 1175, 1436, 1480
MflI RGATCY 6 cut(s) 47, 466, 549, 566, 682, 1126
MhlI GDGCHC 1 cut(s) 1020
MlyI GAGTC 1 cut(s) 625
MmeI TCCRAC 2 cut(s) 208, 525
MnlI CCTC 9 cut(s) 114, 240, 302, 346, 871, 1019, 1209, 1273, 1309
MseI TTAA 4 cut(s) 270, 846, 1335, 1440
MslI CAYNNNNRTG 2 cut(s) 734, 956
MspCI CTTAAG 1 cut(s) 269
MspI CCGG 2 cut(s) 306, 741
MspR9I CCNGG 6 cut(s) 485, 579, 656, 742, 775, 1024
MvaI CCWGG 5 cut(s) 485, 579, 656, 775, 1024
MwoI GCNNNNNNNGC 1 cut(s) 1117
NciI CCSGG 1 cut(s) 742
NdeII GATC 9 cut(s) 47, 138, 466, 549, 566, 682, 925, 1047, 1126
NlaIII CATG 3 cut(s) 445, 904, 1115
NmuCI GTSAC 5 cut(s) 391, 556, 736, 869, 1399
PasI CCCWGGG 1 cut(s) 655
PfeI GAWTC 8 cut(s) 152, 623, 770, 806, 933, 1072, 1451, 1473
PflFI GACNNNGTC 1 cut(s) 278
PflMI CCANNNNNTGG 1 cut(s) 584
PfoI TCCNGGA 2 cut(s) 483, 577
PkrI GCNGC 4 cut(s) 652, 766, 943, 946
PleI GAGTC 1 cut(s) 625
PmaCI CACGTG 1 cut(s) 218
PmlI CACGTG 1 cut(s) 218
PpsI GAGTC 1 cut(s) 625
Ppu21I YACGTR 1 cut(s) 218
PsiI TTATAA 1 cut(s) 618
Psp124BI GAGCTC 1 cut(s) 1020
Psp1406I AACGTT 1 cut(s) 78
Psp6I CCWGG 5 cut(s) 483, 577, 654, 773, 1022
PspCI CACGTG 1 cut(s) 218
PspGI CCWGG 5 cut(s) 483, 577, 654, 773, 1022
PspPI GGNCC 4 cut(s) 481, 498, 904, 996
PsuI RGATCY 6 cut(s) 47, 466, 549, 566, 682, 1126
PsyI GACNNNGTC 1 cut(s) 278
RsaI GTAC 3 cut(s) 5, 405, 1277
RsaNI GTAC 3 cut(s) 4, 404, 1276
RseI CAYNNNNRTG 2 cut(s) 734, 956
SacI GAGCTC 1 cut(s) 1020
SaqAI TTAA 4 cut(s) 270, 846, 1335, 1440
SatI GCNGC 4 cut(s) 651, 765, 942, 945
Sau3AI GATC 9 cut(s) 47, 138, 466, 549, 566, 682, 925, 1047, 1126
Sau96I GGNCC 4 cut(s) 481, 498, 904, 996
SchI GAGTC 1 cut(s) 625
ScrFI CCNGG 6 cut(s) 485, 579, 656, 742, 775, 1024
SduI GDGCHC 1 cut(s) 1020
SfaNI GCATC 2 cut(s) 252, 850
SfcI CTRYAG 1 cut(s) 1087
SinI GGWCC 4 cut(s) 481, 498, 904, 996
SmiMI CAYNNNNRTG 2 cut(s) 734, 956
SmlI CTYRAG 1 cut(s) 269
SmoI CTYRAG 1 cut(s) 269
SsiI CCGC 1 cut(s) 722
SspMI CTAG 5 cut(s) 788, 980, 1053, 1151, 1322
SstI GAGCTC 1 cut(s) 1020
StyD4I CCNGG 6 cut(s) 483, 577, 654, 740, 773, 1022
TaaI ACNGT 5 cut(s) 112, 226, 397, 710, 736
TaiI ACGT 3 cut(s) 81, 220, 1277
TaqI TCGA 2 cut(s) 155, 563
TaqII GACCGA 1 cut(s) 984
TatI WGTACW 1 cut(s) 3
TfiI GAWTC 8 cut(s) 152, 623, 770, 806, 933, 1072, 1451, 1473
Tru1I TTAA 4 cut(s) 270, 846, 1335, 1440
Tru9I TTAA 4 cut(s) 270, 846, 1335, 1440
TscAI CASTG 3 cut(s) 400, 713, 741
TseFI GTSAC 5 cut(s) 391, 556, 736, 869, 1399
TseI GCWGC 4 cut(s) 650, 764, 941, 944
Tsp45I GTSAC 5 cut(s) 391, 556, 736, 869, 1399
TspDTI ATGAA 6 cut(s) 458, 889, 903, 940, 1289, 1487
TspRI CASTG 3 cut(s) 400, 713, 741
Tth111I GACNNNGTC 1 cut(s) 278
Van91I CCANNNNNTGG 1 cut(s) 584
Vha464I CTTAAG 1 cut(s) 269
VpaK11BI GGWCC 4 cut(s) 481, 498, 904, 996
XapI RAATTY 5 cut(s) 338, 368, 572, 1330, 1361
XcmI CCANNNNNNNNNTGG 1 cut(s) 1030
XspI CTAG 5 cut(s) 788, 980, 1053, 1151, 1322
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.