RLG00000017314

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000039
Physical Location & Seq
Forward (+)
15165699 .. 15170308
4610 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000017314

Sequence Viewer

Length: 2625 bp
ATGGAAACCGGAAAGGAAAGAAGCAAGCAGGGTGGCTCTATCCATTTCAGGTGTCATCAAATGAAGAAGTTTGATCACCAATACAGAGGATCAAGAATGGCGGACCTCGCTGCAGGTGGTGCTATGGGAGTGCCGTTTACTGTGCTGTATGAAGTGATTAAGGAAGTGGTGATCAAGACTTCGATGTTTAGACCTCTCCTTGAAGAGCTGAAGTCGAAGATAGAAGCTTTGAATCCACTGATTGATCAGATGGACAGCTGGAATAAGGTGTTGGATCGTCCAGAGAAGGAACTTAGACAATTTAAAGTACAAATGGAGAAGGGCCCTGAGCTTATTACCAAGTGCGCCAATCTTAGCAAGTGGAAAAGCTACAAAAAGTATAAATACAGCAACCAACTTCTTGAATTGCAGAGCTCTCTTCAGAATCTGCTGTTTATACTGCAATGGCAACAAGCAAGGGATGTGAAGGAGACCTCGGTTGGAGTAAAGAATGTAGAGACGAGGGTGCAGCGAGTGGATGTGAATGTTGCGGTGTTAAAAGGAGAAGGGATGACTGTTATGAAGGAGACCTTGGATGAGGTAAGAAATATAGGGACGGTGGTCCGGCAGATTGATAAGAAAGGTGAGTCACAGATCCCAATAGTTAGTGAAGTACCTGAACCTCCATTGGTTACAGTTGGATTGTATGTGCCTTTGAGGGAATTGAAGATGAAGCTTCTTAAGAATGATAATGTATCGATGCTTGTGCTAACTGCTCCTGGAGGCTGCGGGAAAACCACATTGGCCACAAAGTTTTGTCAAGATGAGGAAGTCAAAGATATATTCAAGAACAATATCTTCTTCGTCCCTGTTACAAAGAAGTCAACCTTCAACCTTATCGTACACAGACTACATCAACGCAAGAGTACCGACGTACCTATGTTCCAAGATGAAGTAACTGCTGTTAAGTGGCTGCGTAAATTTCTAATGGAAGAAGGACAGAACCCTGTACTGTTGGTCCTGGATGATGTTTGGTCTGAATCAAAATGTATTCTTGAAAAATTTGATGAAGTGAAAATGCCAAATTTCAAGATTCTGGTGACATCAAGATCACAGTTTCCAGAATATGGCTCAATTTATCATCTGAAGTCATTGAATGATAGAGATGCAATGACTCTTTTCCGCCATTCAGCATCCCTGGGAGATGGTCAATGGAATAGTCTTGCTGGAGAGATAGTAGCGCCTTGTAAGGGATATCCACTTGCAATTAAAGTGGTTGGAAAATCACTTCGCGGAAAACCGATTGAGTTCTGGCGCAAAAGAGCATTGGAGTGGTCTAAAGGTAATTCTATTATTGATTCCGAGACTGAAGTGCTTCTTTGCCTTCAAACCAGCTTAGATGCTTTGGATGAAAAAGAAGCTTTCATCAAAGAATGTTTTTTAGACCTTGGTTCATTTCCCCAGGACCAAAGAATTCCAGCAGGTGCTCTGATTGATATGTGGGCAGAGTTATGTGAAGATCTCGATAAAGATTTTCTGGCCATTACAAACGTGCATGAGCTTACCACCCGAAGTTTGGCTGATCTTGTAGTCACAAGGAAGGAGACAGTGGATGATGACTACTACTACAGTGAACACTTTGTCACCCAACATGATATGCTCAGACAGCTCGCTGTCTACCAAGCGAAACTTGACCCAAGTAAAAAACGACTGATCATAGGCAACCGTGGAGACAATCTACCTAAGTGCTTGACTGAACAGAAGCATCAACCAATTAAACCTCGCCTGTTATCTATCTCCTCTGATGAAACGTTCTCGACAAATTTACACAACATTCAACTAGCTGATGTTGAGGTTCTAGTTTTGAATTTCAACACAAAGAGTTATGCTTTACCGGAATTTGTTGAGAAAATGGTTAATCTGAAGGTTCTAATAGTCACAAATGCTTTACCTGCTGAATTGAGTAATTTTCACCTGCTGGCCTCTTTACCAAATCTGAAGAGAATCAGACTAGAGCGTATTTCAATTCCTTCTATAACCAAGCATCACATACAGTTGAAGAGTTTAAAGAAGATCTCCTTATTCATGTGCAGTATTGGCGAAGCTTTCAGCAATTGCTTTTTCCAAAATTCTAATGCATTGCCAAATTTAGAGGAAATGAACATTGACTACTGCAATGATTTGGTGGAGTTGCCTGCTGCACTCTGTGCTCTGGTTAACCTGAAGAAGCTCAGTATAACCAAATCGCATAAGCTATCTGCCTTGCCTGAAGAGATTGGAAAGCTGGTCAATTTAGAAGTACTGAGGCTAAGGTCTTGTACAGTCTTGGCAAAGTTGCCAGACTCAATTAGGAACCTAGTGAAGTTAAACACTCTAGACATAGCTGATTGCTTCAGCATTCAGGAATTGCCTGAAGACTTTGGTGGAATGAGCAGTTTAAAAAATATCAACATGATATGGTGTTCAAGATTGCAAGAGCTGCCTTCATCAGTTGTGGATCTTGAGCAGTTACGGGAAGTGGTATGTGATGAAGACACAGGTGATTTATGGAAACCCTTCTTACCCCGTCTCAAAGACCTCCATATAAAGCCGGTCCAAGAAAATGTCAACCTGAATTGGCTACATAAGAGACCTGATTTTCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
NB-ARC RPW8

Protein Analysis

875

Amino Acids

99.69

Weight (kDa)

7.75

Isoelectric Point (pI)

38.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RPW8 PF05659 34 - 170 2.3e-29 Arabidopsis broad-spectrum mildew resistance protein RPW8
NB-ARC PF00931 232 - 387 3.6e-15 NB-ARC domain
LRR_14 PF23598 609 - 750 5.4e-06 Leucine-rich repeat region
LRR_14 PF23598 728 - 834 1.7e-13 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 3 cut(s) 104, 1451, 1962
Acc36I ACCTGC 4 cut(s) 104, 1451, 1939, 1962
AccB7I CCANNNNNTGG 1 cut(s) 1106
AccI GTMKAC 1 cut(s) 1656
AccII CGCG 1 cut(s) 1272
AciI CCGC 5 cut(s) 101, 530, 768, 1162, 1272
AclI AACGTT 1 cut(s) 1790
AclWI GGATC 4 cut(s) 97, 282, 628, 2484
AcoI YGGCCR 2 cut(s) 783, 1518
AcsI RAATTY 9 cut(s) 959, 1040, 1063, 1452, 1801, 1846, 1877, 2107, 2125
AdeI CACNNNGTG 1 cut(s) 2186
AfaI GTAC 8 cut(s) 309, 654, 882, 907, 915, 990, 2280, 2299
AfiI CCNNNNNNNGG 3 cut(s) 1106, 1229, 1555
AflII CTTAAG 1 cut(s) 719
AjnI CCWGG 4 cut(s) 757, 999, 1176, 1440
AjuI GAANNNNNNNTTGG 6 cut(s) 254, 286, 554, 586, 764, 796
Alw21I GWGCWC 3 cut(s) 416, 1468, 2191
Alw26I GTCTC 8 cut(s) 464, 491, 560, 1337, 1577, 1704, 2552, 2602
AlwI GGATC 4 cut(s) 97, 282, 628, 2484
AlwNI CAGNNNCTG 1 cut(s) 427
AoxI GGCC 4 cut(s) 322, 783, 1518, 1959
ApaI GGGCCC 1 cut(s) 326
ApeKI GCWGC 6 cut(s) 110, 508, 765, 952, 2177, 2458
ApoI RAATTY 9 cut(s) 959, 1040, 1063, 1452, 1801, 1846, 1877, 2107, 2125
Asp700I GAANNNNTTC 2 cut(s) 1353, 2534
AspLEI GCGC 3 cut(s) 347, 1222, 1296
AspS9I GGNCC 7 cut(s) 103, 322, 323, 601, 997, 1444, 2572
AsuHPI GGTGA 7 cut(s) 68, 181, 635, 1090, 1615, 1943, 2531
AvaII GGWCC 5 cut(s) 103, 601, 997, 1444, 2572
BaeGI GKGCMC 1 cut(s) 326
BaeI ACNNNNGTAYC 2 cut(s) 897, 930
BalI TGGCCA 2 cut(s) 785, 1520
BanII GRGCYC 2 cut(s) 326, 416
BbsI GAAGAC 2 cut(s) 2400, 2517
Bbv12I GWGCWC 3 cut(s) 416, 1468, 2191
BbvI GCAGC 6 cut(s) 97, 520, 752, 939, 2164, 2445
BccI CCATC 2 cut(s) 244, 1178
BceAI ACGGC 1 cut(s) 118
BcgI CGANNNNNNTGC 2 cut(s) 727, 761
BciT130I CCWGG 4 cut(s) 759, 1001, 1178, 1442
BclI TGATCA 4 cut(s) 73, 171, 244, 1692
BcoDI GTCTC 8 cut(s) 464, 491, 560, 1337, 1577, 1704, 2552, 2602
BfaI CTAG 5 cut(s) 1820, 1838, 1991, 2336, 2354
BfmI CTRYAG 2 cut(s) 111, 1606
BfoI RGCGCY 1 cut(s) 1223
BfrI CTTAAG 1 cut(s) 719
BfuAI ACCTGC 4 cut(s) 104, 1451, 1939, 1962
BglII AGATCT 2 cut(s) 1498, 2052
BisI GCNGC 6 cut(s) 111, 509, 766, 953, 2178, 2459
BlsI GCNGC 6 cut(s) 112, 510, 767, 954, 2179, 2460
BmcAI AGTACT 1 cut(s) 2280
Bme1390I CCNGG 4 cut(s) 759, 1001, 1178, 1442
Bme18I GGWCC 5 cut(s) 103, 601, 997, 1444, 2572
BmgT120I GGNCC 7 cut(s) 103, 322, 323, 601, 997, 1444, 2572
BmiI GGNNCC 2 cut(s) 324, 2333
BmrFI CCNGG 4 cut(s) 759, 1001, 1178, 1442
BmsI GCATC 6 cut(s) 729, 1135, 1181, 1369, 1753, 2032
BoxI GACNNNNGTC 1 cut(s) 599
BpiI GAAGAC 2 cut(s) 2400, 2517
BpmI CTGGAG 2 cut(s) 780, 1227
Bpu10I CCTNAGC 2 cut(s) 327, 2288
BpuEI CTTGAG 1 cut(s) 2501
Bsa29I ATCGAT 1 cut(s) 737
BsaI GGTCTC 3 cut(s) 464, 560, 2602
BsaJI CCNNGG 7 cut(s) 474, 570, 1176, 1177, 1426, 1440, 1705
BsaWI WCCGGW 2 cut(s) 8, 1873
BsaXI ACNNNNNCTCC 2 cut(s) 1200, 1230
Bsc4I CCNNNNNNNGG 3 cut(s) 1106, 1229, 1555
Bse118I RCCGGY 1 cut(s) 2569
Bse3DI GCAATG 4 cut(s) 449, 1155, 2117, 2161
BseBI CCWGG 4 cut(s) 759, 1001, 1178, 1442
BseCI ATCGAT 1 cut(s) 737
BseDI CCNNGG 7 cut(s) 474, 570, 1176, 1177, 1426, 1440, 1705
BseGI GGATG 8 cut(s) 466, 523, 555, 580, 1009, 1172, 1393, 1597
BseLI CCNNNNNNNGG 3 cut(s) 1106, 1229, 1555
BseMI GCAATG 4 cut(s) 449, 1155, 2117, 2161
BseMII CTCAG 4 cut(s) 318, 1654, 2224, 2273
BseRI GAGGAG 1 cut(s) 1768
BseSI GKGCMC 1 cut(s) 326
BseXI GCAGC 6 cut(s) 97, 520, 752, 939, 2164, 2445
BsgI GTGCAG 3 cut(s) 527, 2089, 2163
Bsh1236I CGCG 1 cut(s) 1272
BshFI GGCC 4 cut(s) 324, 785, 1520, 1961
BshVI ATCGAT 1 cut(s) 737
BsiHKAI GWGCWC 3 cut(s) 416, 1468, 2191
BsiSI CCGG 4 cut(s) 9, 604, 1874, 2570
BslFI GGGAC 2 cut(s) 607, 830
BslI CCNNNNNNNGG 3 cut(s) 1106, 1229, 1555
BsmAI GTCTC 8 cut(s) 464, 491, 560, 1337, 1577, 1704, 2552, 2602
BsmBI CGTCTC 2 cut(s) 491, 2552
BsmFI GGGAC 2 cut(s) 607, 830
BsmI GAATGC 1 cut(s) 2376
BsnI GGCC 4 cut(s) 324, 785, 1520, 1961
Bso31I GGTCTC 3 cut(s) 464, 560, 2602
Bsp120I GGGCCC 1 cut(s) 322
Bsp1286I GDGCHC 4 cut(s) 326, 416, 1468, 2191
Bsp1407I TGTACA 1 cut(s) 2297
BspACI CCGC 5 cut(s) 101, 530, 768, 1162, 1272
BspANI GGCC 4 cut(s) 324, 785, 1520, 1961
BspCNI CTCAG 4 cut(s) 319, 1653, 2223, 2274
BspDI ATCGAT 1 cut(s) 737
BspFNI CGCG 1 cut(s) 1272
BspLI GGNNCC 2 cut(s) 324, 2333
BspMAI CTGCAG 1 cut(s) 115
BspMI ACCTGC 4 cut(s) 104, 1451, 1939, 1962
BspPI GGATC 4 cut(s) 97, 282, 628, 2484
BspQI GCTCTTC 1 cut(s) 198
BspTI CTTAAG 1 cut(s) 719
BspTNI GGTCTC 3 cut(s) 464, 560, 2602
BsrDI GCAATG 4 cut(s) 449, 1155, 2117, 2161
BsrFI RCCGGY 1 cut(s) 2569
BsrGI TGTACA 1 cut(s) 2297
BssAI RCCGGY 1 cut(s) 2569
BssECI CCNNGG 7 cut(s) 474, 570, 1176, 1177, 1426, 1440, 1705
BssT1I CCWWGG 2 cut(s) 570, 1426
Bst2UI CCWGG 4 cut(s) 759, 1001, 1178, 1442
Bst6I CTCTTC 5 cut(s) 198, 423, 1973, 2033, 2244
BstAFI CTTAAG 1 cut(s) 719
BstAPI GCANNNNNTGC 3 cut(s) 119, 2186, 2458
BstAUI TGTACA 1 cut(s) 2297
BstC8I GCNNGC 4 cut(s) 26, 1650, 1959, 2175
BstDEI CTNAG 9 cut(s) 293, 327, 353, 1375, 1640, 1722, 2210, 2282, 2288
BstDSI CCRYGG 1 cut(s) 1705
BstF5I GGATG 8 cut(s) 466, 523, 555, 580, 1009, 1172, 1393, 1597
BstFNI CGCG 1 cut(s) 1272
BstH2I RGCGCY 1 cut(s) 1223
BstHHI GCGC 3 cut(s) 347, 1222, 1296
BstMAI GTCTC 8 cut(s) 464, 491, 560, 1337, 1577, 1704, 2552, 2602
BstMWI GCNNNNNNNGC 7 cut(s) 107, 119, 1645, 1931, 2076, 2186, 2458
BstNI CCWGG 4 cut(s) 759, 1001, 1178, 1442
BstPAI GACNNNNGTC 1 cut(s) 599
BstSCI CCNGG 4 cut(s) 757, 999, 1176, 1440
BstSFI CTRYAG 2 cut(s) 111, 1606
BstSLI GKGCMC 1 cut(s) 326
BstUI CGCG 1 cut(s) 1272
BstV1I GCAGC 6 cut(s) 97, 520, 752, 939, 2164, 2445
BstV2I GAAGAC 2 cut(s) 2400, 2517
BstX2I RGATCY 4 cut(s) 633, 1498, 2052, 2476
BstYI RGATCY 4 cut(s) 633, 1498, 2052, 2476
Bsu15I ATCGAT 1 cut(s) 737
BsuRI GGCC 4 cut(s) 324, 785, 1520, 1961
BsuTUI ATCGAT 1 cut(s) 737
BtgI CCRYGG 1 cut(s) 1705
BtsCI GGATG 8 cut(s) 466, 523, 555, 580, 1009, 1172, 1393, 1597
BtsIMutI CAGTG 3 cut(s) 236, 1593, 1615
BveI ACCTGC 4 cut(s) 104, 1451, 1939, 1962
Cac8I GCNNGC 4 cut(s) 26, 1650, 1959, 2175
CaiI CAGNNNCTG 1 cut(s) 427
CfoI GCGC 3 cut(s) 347, 1222, 1296
Cfr10I RCCGGY 1 cut(s) 2569
Cfr13I GGNCC 7 cut(s) 103, 322, 323, 601, 997, 1444, 2572
ClaI ATCGAT 1 cut(s) 737
Csp6I GTAC 8 cut(s) 308, 653, 881, 906, 914, 989, 2279, 2298
CspCI CAANNNNNGTGG 4 cut(s) 13, 48, 1233, 1268
CviAII CATG 4 cut(s) 1535, 1631, 2065, 2431
CviQI GTAC 8 cut(s) 308, 653, 881, 906, 914, 989, 2279, 2298
DdeI CTNAG 9 cut(s) 293, 327, 353, 1375, 1640, 1722, 2210, 2282, 2288
DraI TTTAAA 3 cut(s) 304, 2046, 2418
DraIII CACNNNGTG 1 cut(s) 2186
EaeI YGGCCR 2 cut(s) 783, 1518
Eam1104I CTCTTC 5 cut(s) 198, 423, 1973, 2033, 2244
EarI CTCTTC 5 cut(s) 198, 423, 1973, 2033, 2244
EciI GGCGGA 2 cut(s) 116, 1151
Ecl136II GAGCTC 1 cut(s) 414
Eco130I CCWWGG 2 cut(s) 570, 1426
Eco24I GRGCYC 2 cut(s) 326, 416
Eco31I GGTCTC 3 cut(s) 464, 560, 2602
Eco32I GATATC 1 cut(s) 1235
Eco47I GGWCC 5 cut(s) 103, 601, 997, 1444, 2572
Eco53kI GAGCTC 1 cut(s) 414
EcoICRI GAGCTC 1 cut(s) 414
EcoO109I RGGNCCY 2 cut(s) 322, 323
EcoRI GAATTC 1 cut(s) 1452
EcoRII CCWGG 4 cut(s) 757, 999, 1176, 1440
EcoRV GATATC 1 cut(s) 1235
EcoT14I CCWWGG 2 cut(s) 570, 1426
EcoT22I ATGCAT 1 cut(s) 2119
EcoT38I GRGCYC 2 cut(s) 326, 416
ErhI CCWWGG 2 cut(s) 570, 1426
Esp3I CGTCTC 2 cut(s) 491, 2552
FaeI CATG 4 cut(s) 1538, 1634, 2068, 2434
FaqI GGGAC 2 cut(s) 607, 830
FatI CATG 4 cut(s) 1534, 1630, 2064, 2430
FauI CCCGC 1 cut(s) 761
FbaI TGATCA 4 cut(s) 73, 171, 244, 1692
FblI GTMKAC 1 cut(s) 1656
Fnu4HI GCNGC 6 cut(s) 111, 509, 766, 953, 2178, 2459
FokI GGATG 8 cut(s) 473, 530, 562, 587, 1016, 1159, 1400, 1604
FriOI GRGCYC 2 cut(s) 326, 416
Fsp4HI GCNGC 6 cut(s) 111, 509, 766, 953, 2178, 2459
FspBI CTAG 5 cut(s) 1820, 1838, 1991, 2336, 2354
GlaI GCGC 3 cut(s) 346, 1221, 1295
GluI GCNGC 6 cut(s) 111, 509, 766, 953, 2178, 2459
GsuI CTGGAG 2 cut(s) 780, 1227
HaeII RGCGCY 1 cut(s) 1223
HaeIII GGCC 4 cut(s) 324, 785, 1520, 1961
HapII CCGG 4 cut(s) 9, 604, 1874, 2570
HhaI GCGC 3 cut(s) 347, 1222, 1296
Hin1II CATG 4 cut(s) 1538, 1634, 2068, 2434
Hin6I GCGC 3 cut(s) 345, 1220, 1294
HinP1I GCGC 3 cut(s) 345, 1220, 1294
HincII GTYRAC 3 cut(s) 864, 2197, 2587
HindII GTYRAC 3 cut(s) 864, 2197, 2587
HindIII AAGCTT 4 cut(s) 225, 713, 1398, 2082
HinfI GANTC 9 cut(s) 232, 424, 626, 1019, 1072, 1153, 1337, 1983, 2321
HpaI GTTAAC 1 cut(s) 2197
HpaII CCGG 4 cut(s) 9, 604, 1874, 2570
HphI GGTGA 7 cut(s) 68, 181, 635, 1090, 1615, 1943, 2531
Hpy166II GTNNAC 7 cut(s) 138, 864, 883, 1613, 1657, 2197, 2587
Hpy8I GTNNAC 7 cut(s) 138, 864, 883, 1613, 1657, 2197, 2587
Hpy99I CGWCG 1 cut(s) 914
HpyCH4IV ACGT 3 cut(s) 912, 1530, 1790
HpyF10VI GCNNNNNNNGC 7 cut(s) 107, 119, 1645, 1931, 2076, 2186, 2458
HpyF3I CTNAG 9 cut(s) 293, 327, 353, 1375, 1640, 1722, 2210, 2282, 2288
HpySE526I ACGT 3 cut(s) 912, 1530, 1790
Hsp92II CATG 4 cut(s) 1538, 1634, 2068, 2434
HspAI GCGC 3 cut(s) 345, 1220, 1294
Ksp22I TGATCA 4 cut(s) 73, 171, 244, 1692
KspAI GTTAAC 1 cut(s) 2197
LguI GCTCTTC 1 cut(s) 198
LmnI GCTCC 1 cut(s) 760
Lsp1109I GCAGC 6 cut(s) 97, 520, 752, 939, 2164, 2445
LweI GCATC 6 cut(s) 729, 1135, 1181, 1369, 1753, 2032
MaeI CTAG 5 cut(s) 1820, 1838, 1991, 2336, 2354
MaeII ACGT 3 cut(s) 912, 1530, 1790
MaeIII GTNAC 9 cut(s) 627, 670, 850, 934, 1078, 1570, 1621, 1915, 2487
MfeI CAATTG 1 cut(s) 2092
MflI RGATCY 4 cut(s) 633, 1498, 2052, 2476
MhlI GDGCHC 4 cut(s) 326, 416, 1468, 2191
MlsI TGGCCA 2 cut(s) 785, 1520
MluNI TGGCCA 2 cut(s) 785, 1520
MlyI GAGTC 3 cut(s) 635, 1147, 2315
MmeI TCCRAC 4 cut(s) 252, 460, 658, 1237
Mox20I TGGCCA 2 cut(s) 785, 1520
Mph1103I ATGCAT 1 cut(s) 2119
MroXI GAANNNNTTC 2 cut(s) 1353, 2534
MscI TGGCCA 2 cut(s) 785, 1520
MslI CAYNNNNRTG 1 cut(s) 1309
Msp20I TGGCCA 2 cut(s) 785, 1520
MspA1I CMGCKG 1 cut(s) 258
MspCI CTTAAG 1 cut(s) 719
MspI CCGG 4 cut(s) 9, 604, 1874, 2570
MspR9I CCNGG 4 cut(s) 759, 1001, 1178, 1442
MunI CAATTG 1 cut(s) 2092
Mva1269I GAATGC 1 cut(s) 2376
MvaI CCWGG 4 cut(s) 759, 1001, 1178, 1442
MvnI CGCG 1 cut(s) 1272
MwoI GCNNNNNNNGC 7 cut(s) 107, 119, 1645, 1931, 2076, 2186, 2458
NlaIII CATG 4 cut(s) 1538, 1634, 2068, 2434
NlaIV GGNNCC 2 cut(s) 324, 2333
NmuCI GTSAC 5 cut(s) 627, 1078, 1570, 1621, 1915
NsiI ATGCAT 1 cut(s) 2119
PaqCI CACCTGC 3 cut(s) 104, 1451, 1962
PasI CCCWGGG 1 cut(s) 1177
PciSI GCTCTTC 1 cut(s) 198
PctI GAATGC 1 cut(s) 2376
PdmI GAANNNNTTC 2 cut(s) 1353, 2534
PfeI GAWTC 6 cut(s) 232, 424, 1019, 1072, 1337, 1983
PflMI CCANNNNNTGG 1 cut(s) 1106
PfoI TCCNGGA 2 cut(s) 757, 999
PkrI GCNGC 6 cut(s) 112, 510, 767, 954, 2179, 2460
PleI GAGTC 3 cut(s) 634, 1147, 2315
PpsI GAGTC 3 cut(s) 634, 1147, 2315
PshAI GACNNNNGTC 1 cut(s) 599
Psp124BI GAGCTC 1 cut(s) 416
Psp1406I AACGTT 1 cut(s) 1790
Psp6I CCWGG 4 cut(s) 757, 999, 1176, 1440
PspGI CCWGG 4 cut(s) 757, 999, 1176, 1440
PspN4I GGNNCC 2 cut(s) 324, 2333
PspOMI GGGCCC 1 cut(s) 322
PspPI GGNCC 7 cut(s) 103, 322, 323, 601, 997, 1444, 2572
PsrI GAACNNNNNNTAC 2 cut(s) 2132, 2164
PstI CTGCAG 1 cut(s) 115
PstNI CAGNNNCTG 1 cut(s) 427
PsuI RGATCY 4 cut(s) 633, 1498, 2052, 2476
PvuII CAGCTG 1 cut(s) 258
RsaI GTAC 8 cut(s) 309, 654, 882, 907, 915, 990, 2280, 2299
RsaNI GTAC 8 cut(s) 308, 653, 881, 906, 914, 989, 2279, 2298
RseI CAYNNNNRTG 1 cut(s) 1309
SacI GAGCTC 1 cut(s) 416
SapI GCTCTTC 1 cut(s) 198
SatI GCNGC 6 cut(s) 111, 509, 766, 953, 2178, 2459
Sau96I GGNCC 7 cut(s) 103, 322, 323, 601, 997, 1444, 2572
ScaI AGTACT 1 cut(s) 2280
SchI GAGTC 3 cut(s) 635, 1147, 2315
ScrFI CCNGG 4 cut(s) 759, 1001, 1178, 1442
SduI GDGCHC 4 cut(s) 326, 416, 1468, 2191
SfaNI GCATC 6 cut(s) 729, 1135, 1181, 1369, 1753, 2032
SfcI CTRYAG 2 cut(s) 111, 1606
SinI GGWCC 5 cut(s) 103, 601, 997, 1444, 2572
SmiMI CAYNNNNRTG 1 cut(s) 1309
SmlI CTYRAG 2 cut(s) 719, 2480
SmoI CTYRAG 2 cut(s) 719, 2480
SsiI CCGC 5 cut(s) 101, 530, 768, 1162, 1272
SspMI CTAG 5 cut(s) 1820, 1838, 1991, 2336, 2354
SstI GAGCTC 1 cut(s) 416
StyD4I CCNGG 4 cut(s) 757, 999, 1176, 1440
StyI CCWWGG 2 cut(s) 570, 1426
TaiI ACGT 3 cut(s) 915, 1533, 1793
TaqI TCGA 5 cut(s) 182, 215, 737, 1503, 1796
TatI WGTACW 4 cut(s) 307, 988, 2278, 2297
TfiI GAWTC 6 cut(s) 232, 424, 1019, 1072, 1337, 1983
TscAI CASTG 3 cut(s) 243, 1593, 1615
TseFI GTSAC 5 cut(s) 627, 1078, 1570, 1621, 1915
TseI GCWGC 6 cut(s) 110, 508, 765, 952, 2177, 2458
Tsp45I GTSAC 5 cut(s) 627, 1078, 1570, 1621, 1915
TspRI CASTG 3 cut(s) 243, 1593, 1615
Van91I CCANNNNNTGG 1 cut(s) 1106
Vha464I CTTAAG 1 cut(s) 719
VpaK11BI GGWCC 5 cut(s) 103, 601, 997, 1444, 2572
XapI RAATTY 9 cut(s) 959, 1040, 1063, 1452, 1801, 1846, 1877, 2107, 2125
XbaI TCTAGA 1 cut(s) 2353
XcmI CCANNNNNNNNNTGG 1 cut(s) 1552
XmiI GTMKAC 1 cut(s) 1656
XmnI GAANNNNTTC 2 cut(s) 1353, 2534
XspI CTAG 5 cut(s) 1820, 1838, 1991, 2336, 2354
ZrmI AGTACT 1 cut(s) 2280
Zsp2I ATGCAT 1 cut(s) 2119
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.